data_5FKF # _entry.id 5FKF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5FKF pdb_00005fkf 10.2210/pdb5fkf/pdb PDBE EBI-65298 ? ? WWPDB D_1290065298 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-05-25 2 'Structure model' 1 1 2016-07-06 3 'Structure model' 1 2 2024-01-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' Other 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' pdbx_struct_conn_angle 7 3 'Structure model' struct_conn 8 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_sf' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 23 3 'Structure model' '_pdbx_struct_conn_angle.value' 24 3 'Structure model' '_struct_conn.pdbx_dist_value' 25 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 31 3 'Structure model' '_struct_conn.ptnr1_symmetry' 32 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 33 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 38 3 'Structure model' '_struct_conn.ptnr2_symmetry' 39 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 40 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 41 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 5FKF _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2015-10-15 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 5FK1 unspecified 'SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS UG' PDB 5FK2 unspecified 'SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS GG' PDB 5FK3 unspecified 'SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS CC' PDB 5FK4 unspecified 'SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS UU' PDB 5FK5 unspecified 'SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS AA' PDB 5FK6 unspecified 'SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS CA' PDB 5FKD unspecified 'SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS UA' PDB 5FKE unspecified 'SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS GU' PDB 5FKG unspecified 'SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS CG' PDB 5FKH unspecified 'SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN IS CU' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Huang, L.' 1 'Lilley, D.M.J.' 2 # _citation.id primary _citation.title 'A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 44 _citation.page_first 5390 _citation.page_last ? _citation.year 2016 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 27016741 _citation.pdbx_database_id_DOI 10.1093/NAR/GKW201 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Huang, L.' 1 ? primary 'Wang, J.' 2 ? primary 'Lilley, D.M.J.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'SAM-I RIBOSWITCH' 30544.312 1 ? ? 'SAM BINDING DOMAIN' ? 2 non-polymer syn S-ADENOSYLMETHIONINE 398.437 1 ? ? ? ? 3 non-polymer syn 'BARIUM ION' 137.327 12 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 5 non-polymer syn 'POTASSIUM ION' 39.098 2 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GGCUUAUCAAGAGAGGGCGAGCGACUGGCGCGAAGAUCCCCGGCAACCAGAAAUGGUGCCAAUUCCUGCAGCGGAAACGU UGAAAGAUGAGCCG ; _entity_poly.pdbx_seq_one_letter_code_can ;GGCUUAUCAAGAGAGGGCGAGCGACUGGCGCGAAGAUCCCCGGCAACCAGAAAUGGUGCCAAUUCCUGCAGCGGAAACGU UGAAAGAUGAGCCG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 S-ADENOSYLMETHIONINE SAM 3 'BARIUM ION' BA 4 'SODIUM ION' NA 5 'POTASSIUM ION' K # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 C n 1 4 U n 1 5 U n 1 6 A n 1 7 U n 1 8 C n 1 9 A n 1 10 A n 1 11 G n 1 12 A n 1 13 G n 1 14 A n 1 15 G n 1 16 G n 1 17 G n 1 18 C n 1 19 G n 1 20 A n 1 21 G n 1 22 C n 1 23 G n 1 24 A n 1 25 C n 1 26 U n 1 27 G n 1 28 G n 1 29 C n 1 30 G n 1 31 C n 1 32 G n 1 33 A n 1 34 A n 1 35 G n 1 36 A n 1 37 U n 1 38 C n 1 39 C n 1 40 C n 1 41 C n 1 42 G n 1 43 G n 1 44 C n 1 45 A n 1 46 A n 1 47 C n 1 48 C n 1 49 A n 1 50 G n 1 51 A n 1 52 A n 1 53 A n 1 54 U n 1 55 G n 1 56 G n 1 57 U n 1 58 G n 1 59 C n 1 60 C n 1 61 A n 1 62 A n 1 63 U n 1 64 U n 1 65 C n 1 66 C n 1 67 U n 1 68 G n 1 69 C n 1 70 A n 1 71 G n 1 72 C n 1 73 G n 1 74 G n 1 75 A n 1 76 A n 1 77 A n 1 78 C n 1 79 G n 1 80 U n 1 81 U n 1 82 G n 1 83 A n 1 84 A n 1 85 A n 1 86 G n 1 87 A n 1 88 U n 1 89 G n 1 90 A n 1 91 G n 1 92 C n 1 93 C n 1 94 G n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'THERMOANAEROBACTER TENGCONGENSIS' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 119072 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 BA non-polymer . 'BARIUM ION' ? 'Ba 2' 137.327 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 SAM non-polymer . S-ADENOSYLMETHIONINE ? 'C15 H22 N6 O5 S' 398.437 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 C 3 3 3 C C A . n A 1 4 U 4 4 4 U U A . n A 1 5 U 5 5 5 U U A . n A 1 6 A 6 6 6 A A A . n A 1 7 U 7 7 7 U U A . n A 1 8 C 8 8 8 C C A . n A 1 9 A 9 9 9 A A A . n A 1 10 A 10 10 10 A A A . n A 1 11 G 11 11 11 G G A . n A 1 12 A 12 12 12 A A A . n A 1 13 G 13 13 13 G G A . n A 1 14 A 14 14 14 A A A . n A 1 15 G 15 15 15 G G A . n A 1 16 G 16 16 16 G G A . n A 1 17 G 17 17 17 G G A . n A 1 18 C 18 18 18 C C A . n A 1 19 G 19 19 19 G G A . n A 1 20 A 20 20 20 A A A . n A 1 21 G 21 21 21 G G A . n A 1 22 C 22 22 22 C C A . n A 1 23 G 23 23 23 G G A . n A 1 24 A 24 24 24 A A A . n A 1 25 C 25 25 25 C C A . n A 1 26 U 26 26 26 U U A . n A 1 27 G 27 27 27 G G A . n A 1 28 G 28 28 28 G G A . n A 1 29 C 29 29 29 C C A . n A 1 30 G 30 30 30 G G A . n A 1 31 C 31 31 31 C C A . n A 1 32 G 32 32 32 G G A . n A 1 33 A 33 33 33 A A A . n A 1 34 A 34 34 34 A A A . n A 1 35 G 35 35 35 G G A . n A 1 36 A 36 36 36 A A A . n A 1 37 U 37 37 37 U U A . n A 1 38 C 38 38 38 C C A . n A 1 39 C 39 39 39 C C A . n A 1 40 C 40 40 40 C C A . n A 1 41 C 41 41 41 C C A . n A 1 42 G 42 42 42 G G A . n A 1 43 G 43 43 43 G G A . n A 1 44 C 44 44 44 C C A . n A 1 45 A 45 45 45 A A A . n A 1 46 A 46 46 46 A A A . n A 1 47 C 47 47 47 C C A . n A 1 48 C 48 48 48 C C A . n A 1 49 A 49 49 49 A A A . n A 1 50 G 50 50 50 G G A . n A 1 51 A 51 51 51 A A A . n A 1 52 A 52 52 52 A A A . n A 1 53 A 53 53 53 A A A . n A 1 54 U 54 54 54 U U A . n A 1 55 G 55 55 55 G G A . n A 1 56 G 56 56 56 G G A . n A 1 57 U 57 57 57 U U A . n A 1 58 G 58 58 58 G G A . n A 1 59 C 59 59 59 C C A . n A 1 60 C 60 60 60 C C A . n A 1 61 A 61 61 61 A A A . n A 1 62 A 62 62 62 A A A . n A 1 63 U 63 63 63 U U A . n A 1 64 U 64 64 64 U U A . n A 1 65 C 65 65 65 C C A . n A 1 66 C 66 66 66 C C A . n A 1 67 U 67 67 67 U U A . n A 1 68 G 68 68 68 G G A . n A 1 69 C 69 69 69 C C A . n A 1 70 A 70 70 70 A A A . n A 1 71 G 71 71 71 G G A . n A 1 72 C 72 72 72 C C A . n A 1 73 G 73 73 73 G G A . n A 1 74 G 74 74 74 G G A . n A 1 75 A 75 75 75 A A A . n A 1 76 A 76 76 76 A A A . n A 1 77 A 77 77 77 A A A . n A 1 78 C 78 78 78 C C A . n A 1 79 G 79 79 79 G G A . n A 1 80 U 80 80 80 U U A . n A 1 81 U 81 81 81 U U A . n A 1 82 G 82 82 82 G G A . n A 1 83 A 83 83 83 A A A . n A 1 84 A 84 84 84 A A A . n A 1 85 A 85 85 85 A A A . n A 1 86 G 86 86 86 G G A . n A 1 87 A 87 87 87 A A A . n A 1 88 U 88 88 88 U U A . n A 1 89 G 89 89 89 G G A . n A 1 90 A 90 90 90 A A A . n A 1 91 G 91 91 91 G G A . n A 1 92 C 92 92 92 C C A . n A 1 93 C 93 93 93 C C A . n A 1 94 G 94 94 94 G G A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAM 1 1095 1095 SAM SAM A . C 3 BA 1 1096 1096 BA BA A . D 3 BA 1 1097 1097 BA BA A . E 3 BA 1 1098 1098 BA BA A . F 3 BA 1 1099 1099 BA BA A . G 3 BA 1 1100 1100 BA BA A . H 3 BA 1 1101 1101 BA BA A . I 3 BA 1 1102 1102 BA BA A . J 3 BA 1 1103 1103 BA BA A . K 3 BA 1 1104 1104 BA BA A . L 4 NA 1 1105 1105 NA NA A . M 5 K 1 1106 1106 K K A . N 5 K 1 1107 1107 K K A . O 4 NA 1 1108 1108 NA NA A . P 3 BA 1 1113 1113 BA BA A . Q 3 BA 1 1128 1128 BA BA A . R 3 BA 1 1129 1129 BA BA A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 iMOSFLM 'data reduction' . ? 2 Aimless 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 5FKF _cell.length_a 61.810 _cell.length_b 61.810 _cell.length_c 154.940 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5FKF _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # _exptl.entry_id 5FKF _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.01 _exptl_crystal.density_percent_sol 38.9 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '40 MM NA-CACODYLATE (PH 7.0), 80 MM KCL, 50 MM BACL2, 12 MM SPERMINE-HCL, 14% (V/V) MPD' # _diffrn.id 1 _diffrn.ambient_temp 173 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PIXEL' _diffrn_detector.pdbx_collection_date 2013-12-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I03' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I03 _diffrn_source.pdbx_wavelength 1.000 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5FKF _reflns.observed_criterion_sigma_I 2.9 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 77.47 _reflns.d_resolution_high 2.80 _reflns.number_obs 7923 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.09 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.50 _reflns.B_iso_Wilson_estimate 61.51 _reflns.pdbx_redundancy 6.2 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.95 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.52 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.90 _reflns_shell.pdbx_redundancy 6.3 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5FKF _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 7923 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 57.410 _refine.ls_d_res_high 2.800 _refine.ls_percent_reflns_obs 99.65 _refine.ls_R_factor_obs 0.2073 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2045 _refine.ls_R_factor_R_free 0.2575 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.3 _refine.ls_number_reflns_R_free 743 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 77.13 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 5FJC' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.44 _refine.pdbx_overall_phase_error 32.43 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2027 _refine_hist.pdbx_number_atoms_ligand 43 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2070 _refine_hist.d_res_high 2.800 _refine_hist.d_res_low 57.410 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.005 ? ? 2301 'X-RAY DIFFRACTION' ? f_angle_d 0.985 ? ? 3586 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 17.432 ? ? 1139 'X-RAY DIFFRACTION' ? f_chiral_restr 0.050 ? ? 475 'X-RAY DIFFRACTION' ? f_plane_restr 0.008 ? ? 96 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.8001 3.0163 2654 0.3227 100.00 0.4449 . . 152 . . 'X-RAY DIFFRACTION' . 3.0163 3.3198 2647 0.2360 100.00 0.2973 . . 159 . . 'X-RAY DIFFRACTION' . 3.3198 3.8002 2682 0.2041 100.00 0.2448 . . 136 . . 'X-RAY DIFFRACTION' . 3.8002 4.7874 2698 0.1813 100.00 0.1951 . . 122 . . 'X-RAY DIFFRACTION' . 4.7874 57.4225 2646 0.1847 100.00 0.2470 . . 174 . . # _database_PDB_matrix.entry_id 5FKF _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 5FKF _struct.title 'SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is UC' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5FKF _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'RNA, KINK TURN, RNA MOTIF, SAM-I RIBOSWITCH' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 4 ? M N N 5 ? N N N 5 ? O N N 4 ? P N N 3 ? Q N N 3 ? R N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5FKF _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession 5FKF _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5FKF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 94 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5FKF _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 94 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 94 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8140 ? 1 MORE -293.9 ? 1 'SSA (A^2)' 28460 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 1 OP2 ? ? ? 1_555 E BA . BA ? ? A G 1 A BA 1098 1_555 ? ? ? ? ? ? ? 2.763 ? ? metalc2 metalc ? ? A G 1 "O5'" ? ? ? 1_555 E BA . BA ? ? A G 1 A BA 1098 1_555 ? ? ? ? ? ? ? 3.311 ? ? metalc3 metalc ? ? A G 1 OP1 ? ? ? 1_555 I BA . BA ? ? A G 1 A BA 1102 1_555 ? ? ? ? ? ? ? 3.226 ? ? metalc4 metalc ? ? A G 1 N7 ? ? ? 7_555 P BA . BA ? ? A G 1 A BA 1113 1_555 ? ? ? ? ? ? ? 2.594 ? ? metalc5 metalc ? ? A U 4 O4 ? ? ? 1_555 M K . K ? ? A U 4 A K 1106 1_555 ? ? ? ? ? ? ? 3.466 ? ? metalc6 metalc ? ? A U 5 O4 ? ? ? 1_555 M K . K ? ? A U 5 A K 1106 1_555 ? ? ? ? ? ? ? 3.065 ? ? metalc7 metalc ? ? A G 11 O6 ? ? ? 1_555 J BA . BA ? ? A G 11 A BA 1103 1_555 ? ? ? ? ? ? ? 2.735 ? ? metalc8 metalc ? ? A G 32 O6 ? ? ? 1_555 D BA . BA ? ? A G 32 A BA 1097 1_555 ? ? ? ? ? ? ? 2.958 ? ? metalc9 metalc ? ? A G 32 N7 ? ? ? 8_554 D BA . BA ? ? A G 32 A BA 1097 1_555 ? ? ? ? ? ? ? 2.788 ? ? metalc10 metalc ? ? A G 32 N7 ? ? ? 1_555 D BA . BA ? ? A G 32 A BA 1097 1_555 ? ? ? ? ? ? ? 3.018 ? ? metalc11 metalc ? ? A A 36 OP1 ? ? ? 1_555 Q BA . BA ? ? A A 36 A BA 1128 1_555 ? ? ? ? ? ? ? 2.954 ? ? metalc12 metalc ? ? A G 50 N7 ? ? ? 1_555 G BA . BA ? ? A G 50 A BA 1100 1_555 ? ? ? ? ? ? ? 2.712 ? ? metalc13 metalc ? ? A G 50 O6 ? ? ? 1_555 G BA . BA ? ? A G 50 A BA 1100 1_555 ? ? ? ? ? ? ? 3.023 ? ? metalc14 metalc ? ? A A 62 OP2 ? ? ? 1_555 L NA . NA ? ? A A 62 A NA 1105 1_555 ? ? ? ? ? ? ? 2.743 ? ? metalc15 metalc ? ? A U 64 O2 ? ? ? 1_555 F BA . BA ? ? A U 64 A BA 1099 1_555 ? ? ? ? ? ? ? 3.301 ? ? metalc16 metalc ? ? A U 64 "O2'" ? ? ? 1_555 F BA . BA ? ? A U 64 A BA 1099 1_555 ? ? ? ? ? ? ? 2.775 ? ? metalc17 metalc ? ? A U 64 OP1 ? ? ? 1_555 J BA . BA ? ? A U 64 A BA 1103 1_555 ? ? ? ? ? ? ? 3.324 ? ? metalc18 metalc ? ? A C 65 OP2 ? ? ? 1_555 L NA . NA ? ? A C 65 A NA 1105 1_555 ? ? ? ? ? ? ? 2.966 ? ? metalc19 metalc ? ? A U 67 O4 ? ? ? 1_555 F BA . BA ? ? A U 67 A BA 1099 1_555 ? ? ? ? ? ? ? 2.873 ? ? metalc20 metalc ? ? A G 71 O6 ? ? ? 1_555 N K . K ? ? A G 71 A K 1107 1_555 ? ? ? ? ? ? ? 3.407 ? ? metalc21 metalc ? ? A G 74 N7 ? ? ? 1_555 H BA . BA ? ? A G 74 A BA 1101 1_555 ? ? ? ? ? ? ? 2.671 ? ? metalc22 metalc ? ? A G 74 O6 ? ? ? 1_555 H BA . BA ? ? A G 74 A BA 1101 1_555 ? ? ? ? ? ? ? 2.346 ? ? metalc23 metalc ? ? A G 79 O6 ? ? ? 1_555 N K . K ? ? A G 79 A K 1107 1_555 ? ? ? ? ? ? ? 2.748 ? ? metalc24 metalc ? ? A U 80 O4 ? ? ? 1_555 N K . K ? ? A U 80 A K 1107 1_555 ? ? ? ? ? ? ? 2.904 ? ? metalc25 metalc ? ? A G 82 O6 ? ? ? 1_555 O NA . NA ? ? A G 82 A NA 1108 1_555 ? ? ? ? ? ? ? 2.899 ? ? metalc26 metalc ? ? A G 86 N7 ? ? ? 1_555 C BA . BA ? ? A G 86 A BA 1096 1_555 ? ? ? ? ? ? ? 3.071 ? ? metalc27 metalc ? ? A G 86 O6 ? ? ? 1_555 C BA . BA ? ? A G 86 A BA 1096 1_555 ? ? ? ? ? ? ? 2.945 ? ? metalc28 metalc ? ? A U 88 O4 ? ? ? 1_555 M K . K ? ? A U 88 A K 1106 1_555 ? ? ? ? ? ? ? 2.907 ? ? metalc29 metalc ? ? A G 89 O6 ? ? ? 1_555 M K . K ? ? A G 89 A K 1106 1_555 ? ? ? ? ? ? ? 2.703 ? ? metalc30 metalc ? ? A G 94 O6 ? ? ? 1_555 P BA . BA ? ? A G 94 A BA 1113 1_555 ? ? ? ? ? ? ? 3.341 ? ? metalc31 metalc ? ? I BA . BA ? ? ? 1_555 P BA . BA ? ? A BA 1102 A BA 1113 7_555 ? ? ? ? ? ? ? 3.413 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 93 N3 ? ? A G 1 A C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 93 O2 ? ? A G 1 A C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 93 N4 ? ? A G 1 A C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 92 N3 ? ? A G 2 A C 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 92 O2 ? ? A G 2 A C 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 92 N4 ? ? A G 2 A C 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 91 N1 ? ? A C 3 A G 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 91 O6 ? ? A C 3 A G 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 91 N2 ? ? A C 3 A G 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 4 N3 ? ? ? 1_555 A A 90 N1 ? ? A U 4 A A 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A U 4 O4 ? ? ? 1_555 A A 90 N6 ? ? A U 4 A A 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A U 5 N3 ? ? ? 1_555 A G 89 O6 ? ? A U 5 A G 89 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog13 hydrog ? ? A U 5 O2 ? ? ? 1_555 A G 89 N1 ? ? A U 5 A G 89 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog14 hydrog ? ? A A 6 N1 ? ? ? 1_555 A U 88 N3 ? ? A A 6 A U 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A A 6 N6 ? ? ? 1_555 A U 88 O4 ? ? A A 6 A U 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A U 7 N3 ? ? ? 1_555 A A 87 N1 ? ? A U 7 A A 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A U 7 O4 ? ? ? 1_555 A A 87 N6 ? ? A U 7 A A 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 8 N3 ? ? ? 1_555 A G 86 N1 ? ? A C 8 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 8 N4 ? ? ? 1_555 A G 86 O6 ? ? A C 8 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 8 O2 ? ? ? 1_555 A G 86 N2 ? ? A C 8 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A A 12 N3 ? ? ? 1_555 A G 43 N2 ? ? A A 12 A G 43 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog22 hydrog ? ? A G 13 N2 ? ? ? 1_555 A G 15 O6 ? ? A G 13 A G 15 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog23 hydrog ? ? A G 13 N2 ? ? ? 1_555 A C 41 N3 ? ? A G 13 A C 41 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog24 hydrog ? ? A G 15 N1 ? ? ? 1_555 A C 40 N3 ? ? A G 15 A C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 15 N2 ? ? ? 1_555 A C 40 O2 ? ? A G 15 A C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 15 O6 ? ? ? 1_555 A C 40 N4 ? ? A G 15 A C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 16 N1 ? ? ? 1_555 A C 39 N3 ? ? A G 16 A C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 16 N2 ? ? ? 1_555 A C 39 O2 ? ? A G 16 A C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 16 O6 ? ? ? 1_555 A C 39 N4 ? ? A G 16 A C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 38 N3 ? ? A G 17 A C 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 38 O2 ? ? A G 17 A C 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 38 N4 ? ? A G 17 A C 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 19 N2 ? ? ? 1_555 A A 36 N7 ? ? A G 19 A A 36 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog34 hydrog ? ? A A 20 N6 ? ? ? 1_555 A G 35 N3 ? ? A A 20 A G 35 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog35 hydrog ? ? A A 20 N7 ? ? ? 1_555 A G 35 N2 ? ? A A 20 A G 35 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog36 hydrog ? ? A G 21 N1 ? ? ? 1_555 A C 31 N3 ? ? A G 21 A C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 21 N2 ? ? ? 1_555 A C 31 O2 ? ? A G 21 A C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A G 21 O6 ? ? ? 1_555 A C 31 N4 ? ? A G 21 A C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A G 21 N2 ? ? ? 1_555 A A 36 N3 ? ? A G 21 A A 36 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog40 hydrog ? ? A C 22 N3 ? ? ? 1_555 A G 30 N1 ? ? A C 22 A G 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 22 N4 ? ? ? 1_555 A G 30 O6 ? ? A C 22 A G 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 22 O2 ? ? ? 1_555 A G 30 N2 ? ? A C 22 A G 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 23 N1 ? ? ? 1_555 A C 29 N3 ? ? A G 23 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 23 N2 ? ? ? 1_555 A C 29 O2 ? ? A G 23 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 23 O6 ? ? ? 1_555 A C 29 N4 ? ? A G 23 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A G 23 N2 ? ? ? 1_555 A A 62 N1 ? ? A G 23 A A 62 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog47 hydrog ? ? A G 23 N3 ? ? ? 1_555 A A 62 N6 ? ? A G 23 A A 62 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog48 hydrog ? ? A A 24 N6 ? ? ? 1_555 A A 85 N3 ? ? A A 24 A A 85 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog49 hydrog ? ? A C 25 N3 ? ? ? 1_555 A G 68 N1 ? ? A C 25 A G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A C 25 N4 ? ? ? 1_555 A G 68 O6 ? ? A C 25 A G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A C 25 O2 ? ? ? 1_555 A G 68 N2 ? ? A C 25 A G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A U 26 N3 ? ? ? 1_555 A U 67 O2 ? ? A U 26 A U 67 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog53 hydrog ? ? A U 26 O4 ? ? ? 1_555 A U 67 N3 ? ? A U 26 A U 67 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog54 hydrog ? ? A G 27 N1 ? ? ? 1_555 A C 66 N3 ? ? A G 27 A C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 27 N2 ? ? ? 1_555 A C 66 O2 ? ? A G 27 A C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 27 O6 ? ? ? 1_555 A C 66 N4 ? ? A G 27 A C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 28 N1 ? ? ? 1_555 A C 65 N3 ? ? A G 28 A C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 28 N2 ? ? ? 1_555 A C 65 O2 ? ? A G 28 A C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A G 28 O6 ? ? ? 1_555 A C 65 N4 ? ? A G 28 A C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A G 30 N3 ? ? ? 1_555 A A 61 N6 ? ? A G 30 A A 61 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog61 hydrog ? ? A G 42 N1 ? ? ? 1_555 A C 60 N3 ? ? A G 42 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A G 42 N2 ? ? ? 1_555 A C 60 O2 ? ? A G 42 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A G 42 O6 ? ? ? 1_555 A C 60 N4 ? ? A G 42 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A G 43 N1 ? ? ? 1_555 A C 59 N3 ? ? A G 43 A C 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A G 43 N2 ? ? ? 1_555 A C 59 O2 ? ? A G 43 A C 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A G 43 O6 ? ? ? 1_555 A C 59 N4 ? ? A G 43 A C 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A C 44 N3 ? ? ? 1_555 A G 58 N1 ? ? A C 44 A G 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A C 44 N4 ? ? ? 1_555 A G 58 O6 ? ? A C 44 A G 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A C 44 O2 ? ? ? 1_555 A G 58 N2 ? ? A C 44 A G 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A C 47 N3 ? ? ? 1_555 A G 56 N1 ? ? A C 47 A G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A C 47 N4 ? ? ? 1_555 A G 56 O6 ? ? A C 47 A G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A C 47 O2 ? ? ? 1_555 A G 56 N2 ? ? A C 47 A G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A C 48 N3 ? ? ? 1_555 A G 55 N1 ? ? A C 48 A G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A C 48 N4 ? ? ? 1_555 A G 55 O6 ? ? A C 48 A G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 48 O2 ? ? ? 1_555 A G 55 N2 ? ? A C 48 A G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A A 49 N1 ? ? ? 1_555 A U 54 N3 ? ? A A 49 A U 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A A 49 N6 ? ? ? 1_555 A U 54 O4 ? ? A A 49 A U 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A G 50 N2 ? ? ? 1_555 A A 53 N7 ? ? A G 50 A A 53 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog79 hydrog ? ? A U 64 N3 ? ? ? 1_555 A A 85 N1 ? ? A U 64 A A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A U 64 O4 ? ? ? 1_555 A A 85 N6 ? ? A U 64 A A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A C 69 N3 ? ? ? 1_555 A G 82 N1 ? ? A C 69 A G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A C 69 N4 ? ? ? 1_555 A G 82 O6 ? ? A C 69 A G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A C 69 O2 ? ? ? 1_555 A G 82 N2 ? ? A C 69 A G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A A 70 N1 ? ? ? 1_555 A U 81 N3 ? ? A A 70 A U 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A A 70 N6 ? ? ? 1_555 A U 81 O4 ? ? A A 70 A U 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A G 71 N1 ? ? ? 1_555 A U 80 O2 ? ? A G 71 A U 80 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog87 hydrog ? ? A G 71 O6 ? ? ? 1_555 A U 80 N3 ? ? A G 71 A U 80 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog88 hydrog ? ? A C 72 N3 ? ? ? 1_555 A G 79 N1 ? ? A C 72 A G 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A C 72 N4 ? ? ? 1_555 A G 79 O6 ? ? A C 72 A G 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A C 72 O2 ? ? ? 1_555 A G 79 N2 ? ? A C 72 A G 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A G 73 N1 ? ? ? 1_555 A C 78 N3 ? ? A G 73 A C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? A G 73 N2 ? ? ? 1_555 A C 78 O2 ? ? A G 73 A C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? A G 73 O6 ? ? ? 1_555 A C 78 N4 ? ? A G 73 A C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP2 ? A G 1 ? A G 1 ? 1_555 BA ? E BA . ? A BA 1098 ? 1_555 "O5'" ? A G 1 ? A G 1 ? 1_555 48.1 ? 2 OP1 ? A G 1 ? A G 1 ? 1_555 BA ? I BA . ? A BA 1102 ? 1_555 BA ? P BA . ? A BA 1113 ? 7_555 98.6 ? 3 N7 ? A G 1 ? A G 1 ? 7_555 BA ? P BA . ? A BA 1113 ? 1_555 O6 ? A G 94 ? A G 94 ? 1_555 57.7 ? 4 O4 ? A U 4 ? A U 4 ? 1_555 K ? M K . ? A K 1106 ? 1_555 O4 ? A U 5 ? A U 5 ? 1_555 57.6 ? 5 O4 ? A U 4 ? A U 4 ? 1_555 K ? M K . ? A K 1106 ? 1_555 O4 ? A U 88 ? A U 88 ? 1_555 154.9 ? 6 O4 ? A U 5 ? A U 5 ? 1_555 K ? M K . ? A K 1106 ? 1_555 O4 ? A U 88 ? A U 88 ? 1_555 102.2 ? 7 O4 ? A U 4 ? A U 4 ? 1_555 K ? M K . ? A K 1106 ? 1_555 O6 ? A G 89 ? A G 89 ? 1_555 78.6 ? 8 O4 ? A U 5 ? A U 5 ? 1_555 K ? M K . ? A K 1106 ? 1_555 O6 ? A G 89 ? A G 89 ? 1_555 66.8 ? 9 O4 ? A U 88 ? A U 88 ? 1_555 K ? M K . ? A K 1106 ? 1_555 O6 ? A G 89 ? A G 89 ? 1_555 79.4 ? 10 O6 ? A G 11 ? A G 11 ? 1_555 BA ? J BA . ? A BA 1103 ? 1_555 OP1 ? A U 64 ? A U 64 ? 1_555 102.7 ? 11 O6 ? A G 32 ? A G 32 ? 1_555 BA ? D BA . ? A BA 1097 ? 1_555 N7 ? A G 32 ? A G 32 ? 8_554 72.7 ? 12 O6 ? A G 32 ? A G 32 ? 1_555 BA ? D BA . ? A BA 1097 ? 1_555 N7 ? A G 32 ? A G 32 ? 1_555 64.1 ? 13 N7 ? A G 32 ? A G 32 ? 8_554 BA ? D BA . ? A BA 1097 ? 1_555 N7 ? A G 32 ? A G 32 ? 1_555 94.5 ? 14 N7 ? A G 50 ? A G 50 ? 1_555 BA ? G BA . ? A BA 1100 ? 1_555 O6 ? A G 50 ? A G 50 ? 1_555 66.4 ? 15 OP2 ? A A 62 ? A A 62 ? 1_555 NA ? L NA . ? A NA 1105 ? 1_555 OP2 ? A C 65 ? A C 65 ? 1_555 112.7 ? 16 O2 ? A U 64 ? A U 64 ? 1_555 BA ? F BA . ? A BA 1099 ? 1_555 "O2'" ? A U 64 ? A U 64 ? 1_555 73.6 ? 17 O2 ? A U 64 ? A U 64 ? 1_555 BA ? F BA . ? A BA 1099 ? 1_555 O4 ? A U 67 ? A U 67 ? 1_555 150.3 ? 18 "O2'" ? A U 64 ? A U 64 ? 1_555 BA ? F BA . ? A BA 1099 ? 1_555 O4 ? A U 67 ? A U 67 ? 1_555 120.2 ? 19 O6 ? A G 71 ? A G 71 ? 1_555 K ? N K . ? A K 1107 ? 1_555 O6 ? A G 79 ? A G 79 ? 1_555 70.7 ? 20 O6 ? A G 71 ? A G 71 ? 1_555 K ? N K . ? A K 1107 ? 1_555 O4 ? A U 80 ? A U 80 ? 1_555 60.6 ? 21 O6 ? A G 79 ? A G 79 ? 1_555 K ? N K . ? A K 1107 ? 1_555 O4 ? A U 80 ? A U 80 ? 1_555 65.0 ? 22 N7 ? A G 74 ? A G 74 ? 1_555 BA ? H BA . ? A BA 1101 ? 1_555 O6 ? A G 74 ? A G 74 ? 1_555 78.1 ? 23 N7 ? A G 86 ? A G 86 ? 1_555 BA ? C BA . ? A BA 1096 ? 1_555 O6 ? A G 86 ? A G 86 ? 1_555 62.2 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SAM 1095 ? 11 'BINDING SITE FOR RESIDUE SAM A 1095' AC2 Software A BA 1096 ? 1 'BINDING SITE FOR RESIDUE BA A 1096' AC3 Software A BA 1097 ? 2 'BINDING SITE FOR RESIDUE BA A 1097' AC4 Software A BA 1098 ? 1 'BINDING SITE FOR RESIDUE BA A 1098' AC5 Software A BA 1113 ? 3 'BINDING SITE FOR RESIDUE BA A 1113' AC6 Software A BA 1099 ? 2 'BINDING SITE FOR RESIDUE BA A 1099' AC7 Software A BA 1100 ? 1 'BINDING SITE FOR RESIDUE BA A 1100' AC8 Software A BA 1101 ? 1 'BINDING SITE FOR RESIDUE BA A 1101' AC9 Software A BA 1102 ? 2 'BINDING SITE FOR RESIDUE BA A 1102' BC1 Software A BA 1103 ? 2 'BINDING SITE FOR RESIDUE BA A 1103' BC2 Software A BA 1104 ? 2 'BINDING SITE FOR RESIDUE BA A 1104' BC3 Software A BA 1128 ? 1 'BINDING SITE FOR RESIDUE BA A 1128' BC4 Software A NA 1105 ? 3 'BINDING SITE FOR RESIDUE NA A 1105' BC5 Software A K 1106 ? 4 'BINDING SITE FOR RESIDUE K A 1106' BC6 Software A K 1107 ? 4 'BINDING SITE FOR RESIDUE K A 1107' BC7 Software A NA 1108 ? 2 'BINDING SITE FOR RESIDUE NA A 1108' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 U A 7 ? U A 7 . ? 1_555 ? 2 AC1 11 C A 8 ? C A 8 . ? 1_555 ? 3 AC1 11 G A 11 ? G A 11 . ? 1_555 ? 4 AC1 11 A A 45 ? A A 45 . ? 1_555 ? 5 AC1 11 A A 46 ? A A 46 . ? 1_555 ? 6 AC1 11 C A 47 ? C A 47 . ? 1_555 ? 7 AC1 11 U A 57 ? U A 57 . ? 1_555 ? 8 AC1 11 G A 58 ? G A 58 . ? 1_555 ? 9 AC1 11 C A 59 ? C A 59 . ? 1_555 ? 10 AC1 11 U A 88 ? U A 88 . ? 1_555 ? 11 AC1 11 G A 89 ? G A 89 . ? 1_555 ? 12 AC2 1 G A 86 ? G A 86 . ? 1_555 ? 13 AC3 2 G A 32 ? G A 32 . ? 8_554 ? 14 AC3 2 G A 32 ? G A 32 . ? 1_555 ? 15 AC4 1 G A 1 ? G A 1 . ? 1_555 ? 16 AC5 3 G A 1 ? G A 1 . ? 7_555 ? 17 AC5 3 G A 94 ? G A 94 . ? 1_555 ? 18 AC5 3 BA I . ? BA A 1102 . ? 7_555 ? 19 AC6 2 U A 64 ? U A 64 . ? 1_555 ? 20 AC6 2 U A 67 ? U A 67 . ? 1_555 ? 21 AC7 1 G A 50 ? G A 50 . ? 1_555 ? 22 AC8 1 G A 74 ? G A 74 . ? 1_555 ? 23 AC9 2 G A 1 ? G A 1 . ? 1_555 ? 24 AC9 2 BA P . ? BA A 1113 . ? 7_555 ? 25 BC1 2 G A 11 ? G A 11 . ? 1_555 ? 26 BC1 2 U A 64 ? U A 64 . ? 1_555 ? 27 BC2 2 A A 45 ? A A 45 . ? 1_555 ? 28 BC2 2 G A 55 ? G A 55 . ? 1_555 ? 29 BC3 1 A A 36 ? A A 36 . ? 1_555 ? 30 BC4 3 A A 62 ? A A 62 . ? 1_555 ? 31 BC4 3 U A 64 ? U A 64 . ? 1_555 ? 32 BC4 3 C A 65 ? C A 65 . ? 1_555 ? 33 BC5 4 U A 4 ? U A 4 . ? 1_555 ? 34 BC5 4 U A 5 ? U A 5 . ? 1_555 ? 35 BC5 4 U A 88 ? U A 88 . ? 1_555 ? 36 BC5 4 G A 89 ? G A 89 . ? 1_555 ? 37 BC6 4 A A 70 ? A A 70 . ? 1_555 ? 38 BC6 4 G A 71 ? G A 71 . ? 1_555 ? 39 BC6 4 G A 79 ? G A 79 . ? 1_555 ? 40 BC6 4 U A 80 ? U A 80 . ? 1_555 ? 41 BC7 2 U A 81 ? U A 81 . ? 1_555 ? 42 BC7 2 G A 82 ? G A 82 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C4 A G 32 ? ? C5 A G 32 ? ? N7 A G 32 ? ? 108.01 110.80 -2.79 0.40 N 2 1 C2 A C 44 ? ? N1 A C 44 ? ? "C1'" A C 44 ? ? 125.76 118.80 6.96 1.10 N 3 1 N3 A G 94 ? ? C4 A G 94 ? ? N9 A G 94 ? ? 122.31 126.00 -3.69 0.60 N # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -13.4996 -0.6617 -0.9544 0.4102 0.8058 0.5406 0.5112 0.1617 0.2736 7.7135 6.7076 7.2832 -7.1415 -7.4545 6.9134 0.1339 0.3481 0.2111 -0.0331 -0.3176 -0.4589 0.6932 0.6123 0.0411 'X-RAY DIFFRACTION' 2 ? refined -14.3156 13.8756 -3.8016 0.8144 0.5184 0.4284 0.2335 0.0037 0.1308 7.5531 7.3106 9.5263 -1.2561 -1.9089 -3.5594 -0.3794 0.2559 0.0019 -0.5058 -0.3980 0.2978 0.1499 0.0978 0.5178 'X-RAY DIFFRACTION' 3 ? refined -7.9787 22.1996 -16.9245 1.1402 1.1872 0.5671 0.0300 -0.0831 0.2260 3.3339 2.3218 0.6468 0.6693 -1.4178 -0.1259 -0.1609 1.1498 0.4789 0.0092 0.3464 0.2358 -0.6318 -1.1473 0.0582 'X-RAY DIFFRACTION' 4 ? refined 8.7449 17.7537 -27.3583 0.9731 2.0250 1.0372 -0.1706 0.1500 0.1908 5.0275 6.9708 9.4553 3.3005 2.5601 4.7883 -0.6698 1.8389 1.2654 -0.8041 -0.4794 0.2180 -0.4816 -1.7643 1.2218 'X-RAY DIFFRACTION' 5 ? refined 8.3709 1.6942 -31.1812 1.2264 1.6525 0.5748 0.1961 -0.1005 -0.2400 1.9770 5.7811 6.4461 -1.0038 -1.6689 -0.5768 0.3974 0.2988 -0.0489 0.5272 0.4096 -1.5942 0.3375 2.2320 -0.7235 'X-RAY DIFFRACTION' 6 ? refined -7.7790 1.7921 -26.7256 0.7078 0.7231 0.2779 -0.0257 -0.0435 -0.1058 6.4492 2.4675 3.6879 -0.4530 -4.7070 0.9566 0.1957 0.1567 -0.1072 -0.2376 -0.1507 -0.1971 -0.1717 0.5950 0.0470 'X-RAY DIFFRACTION' 7 ? refined -19.1329 1.9448 -27.2819 1.0370 1.1276 0.5178 -0.2808 -0.0597 -0.0754 2.1839 7.2007 6.1571 -2.1138 -1.9942 -0.5559 0.2220 0.1349 -0.5762 0.0983 0.1900 -0.0612 1.0637 -0.4315 -0.4596 'X-RAY DIFFRACTION' 8 ? refined -7.3177 7.5572 -35.3207 0.7377 0.8461 0.1767 -0.1327 -0.0073 0.0390 1.0113 1.0176 3.3947 -0.3159 -1.7169 0.7509 0.0008 0.4125 -0.0840 -0.2594 0.1979 0.0759 -0.1349 -0.1174 -0.1336 'X-RAY DIFFRACTION' 9 ? refined 3.3838 6.4400 -30.2785 0.9796 1.2005 0.4161 -0.2690 -0.1186 -0.0626 3.6273 3.6540 6.7282 0.3637 0.7792 0.2087 -0.3617 -0.3451 0.0252 0.0080 0.2562 -0.2306 -0.5657 0.9142 0.1118 'X-RAY DIFFRACTION' 10 ? refined 7.1408 17.0400 -15.9717 0.8502 1.4999 0.4540 -0.4602 0.0209 -0.0774 2.5216 0.3915 5.8213 0.2414 -1.0579 1.2275 0.0520 0.2821 -0.1277 0.2369 0.4226 -0.2156 0.3392 0.9549 -0.3590 'X-RAY DIFFRACTION' 11 ? refined -0.2273 17.2213 -0.5186 1.0274 0.9702 0.3342 -0.1644 -0.1219 -0.0546 4.8893 3.7093 5.8246 0.5761 -0.8158 0.1530 0.0408 -0.2217 0.1750 0.4322 0.0674 -0.2811 -0.6208 0.2717 -0.0298 'X-RAY DIFFRACTION' 12 ? refined 9.0907 18.9606 1.3596 1.6989 1.6215 0.6139 -0.2674 -0.2700 -0.3991 0.1829 1.6240 2.2476 0.3160 0.5694 1.6586 -0.1164 -0.4100 0.6329 0.3747 0.0547 -0.1523 -0.7200 0.4363 0.1119 'X-RAY DIFFRACTION' 13 ? refined 0.1956 11.6955 -12.3191 0.8482 1.3165 -0.1752 -0.0958 -0.1039 -0.2504 1.6223 2.4047 1.1786 0.1267 -0.3390 1.3270 -0.0869 0.1546 0.1620 -0.1383 0.0993 -0.0921 0.0773 0.1758 0.0015 'X-RAY DIFFRACTION' 14 ? refined -11.0672 14.9952 -22.7806 0.7973 0.9290 0.5138 0.1427 -0.1914 0.2038 0.6956 3.3394 8.6842 1.2523 -2.0270 -2.2197 -0.4790 0.2950 0.5319 0.2043 0.1603 -0.0078 -0.7420 0.0286 0.3979 'X-RAY DIFFRACTION' 15 ? refined -21.9325 8.6744 -21.8232 0.5546 0.8495 0.4571 -0.1076 -0.0497 0.1292 1.9406 6.0783 6.7835 2.5068 -3.2887 -2.4216 0.0927 -0.2561 0.0215 -0.0014 -0.1226 -0.3388 0.7001 -1.0541 -0.0019 'X-RAY DIFFRACTION' 16 ? refined -36.6027 13.9601 -15.4994 0.8797 1.6117 0.3177 -0.1263 0.1699 0.3862 0.2345 4.8524 6.0024 -0.0267 -0.3131 -5.1536 -0.3888 -0.0961 -0.4218 0.2496 -0.0677 -0.1099 0.6739 0.0069 0.3518 'X-RAY DIFFRACTION' 17 ? refined -36.0248 17.3429 -25.5928 0.7193 1.1217 0.4321 -0.2773 -0.1307 0.2335 0.5583 0.3445 1.7352 0.3713 0.8744 0.4173 -0.1160 -0.4377 0.0314 0.0278 0.2678 0.4454 0.3093 -1.1342 -0.3018 'X-RAY DIFFRACTION' 18 ? refined -25.9424 12.1045 -11.4659 0.8335 1.0833 0.2703 -0.1576 -0.0259 0.2191 3.4873 6.5497 2.4440 -2.6167 -0.8537 0.7448 0.4353 0.7039 0.2582 -1.0870 -0.7901 0.1523 0.5844 -0.8698 0.3094 'X-RAY DIFFRACTION' 19 ? refined -10.6364 6.6599 -7.7101 0.6069 0.4438 0.3548 0.1318 -0.0672 0.0840 4.6399 8.0730 7.6193 -1.4341 3.4834 3.0651 0.0111 -0.5151 -0.3169 0.2004 0.2150 0.7198 -0.2094 -0.1728 -0.0297 'X-RAY DIFFRACTION' 20 ? refined -8.2954 -1.0502 6.1785 1.1062 0.6195 0.2415 0.2174 0.1655 -0.0237 1.7373 3.7824 6.2815 1.2745 -0.5897 0.6004 -0.1212 0.1986 -0.2615 0.1755 0.0242 0.0739 0.4282 0.6195 -0.0046 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 1:4)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 5:8)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 9:12)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 13:16)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 17:20)' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 21:24)' 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 25:28)' 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 29:33)' 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 34:39)' 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 40:45)' 'X-RAY DIFFRACTION' 11 11 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 46:49)' 'X-RAY DIFFRACTION' 12 12 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 50:56)' 'X-RAY DIFFRACTION' 13 13 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 57:60)' 'X-RAY DIFFRACTION' 14 14 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 61:64)' 'X-RAY DIFFRACTION' 15 15 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 65:69)' 'X-RAY DIFFRACTION' 16 16 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 70:73)' 'X-RAY DIFFRACTION' 17 17 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 74:80)' 'X-RAY DIFFRACTION' 18 18 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 81:84)' 'X-RAY DIFFRACTION' 19 19 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 85:90)' 'X-RAY DIFFRACTION' 20 20 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 91:94)' # _pdbx_entry_details.entry_id 5FKF _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'MUTATION A94G' _pdbx_entry_details.has_ligand_of_interest ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 BA BA BA N N 38 C OP3 O N N 39 C P P N N 40 C OP1 O N N 41 C OP2 O N N 42 C "O5'" O N N 43 C "C5'" C N N 44 C "C4'" C N R 45 C "O4'" O N N 46 C "C3'" C N S 47 C "O3'" O N N 48 C "C2'" C N R 49 C "O2'" O N N 50 C "C1'" C N R 51 C N1 N N N 52 C C2 C N N 53 C O2 O N N 54 C N3 N N N 55 C C4 C N N 56 C N4 N N N 57 C C5 C N N 58 C C6 C N N 59 C HOP3 H N N 60 C HOP2 H N N 61 C "H5'" H N N 62 C "H5''" H N N 63 C "H4'" H N N 64 C "H3'" H N N 65 C "HO3'" H N N 66 C "H2'" H N N 67 C "HO2'" H N N 68 C "H1'" H N N 69 C H41 H N N 70 C H42 H N N 71 C H5 H N N 72 C H6 H N N 73 G OP3 O N N 74 G P P N N 75 G OP1 O N N 76 G OP2 O N N 77 G "O5'" O N N 78 G "C5'" C N N 79 G "C4'" C N R 80 G "O4'" O N N 81 G "C3'" C N S 82 G "O3'" O N N 83 G "C2'" C N R 84 G "O2'" O N N 85 G "C1'" C N R 86 G N9 N Y N 87 G C8 C Y N 88 G N7 N Y N 89 G C5 C Y N 90 G C6 C N N 91 G O6 O N N 92 G N1 N N N 93 G C2 C N N 94 G N2 N N N 95 G N3 N N N 96 G C4 C Y N 97 G HOP3 H N N 98 G HOP2 H N N 99 G "H5'" H N N 100 G "H5''" H N N 101 G "H4'" H N N 102 G "H3'" H N N 103 G "HO3'" H N N 104 G "H2'" H N N 105 G "HO2'" H N N 106 G "H1'" H N N 107 G H8 H N N 108 G H1 H N N 109 G H21 H N N 110 G H22 H N N 111 K K K N N 112 NA NA NA N N 113 SAM N N N N 114 SAM CA C N S 115 SAM C C N N 116 SAM O O N N 117 SAM OXT O N N 118 SAM CB C N N 119 SAM CG C N N 120 SAM SD S N S 121 SAM CE C N N 122 SAM "C5'" C N N 123 SAM "C4'" C N S 124 SAM "O4'" O N N 125 SAM "C3'" C N S 126 SAM "O3'" O N N 127 SAM "C2'" C N R 128 SAM "O2'" O N N 129 SAM "C1'" C N R 130 SAM N9 N Y N 131 SAM C8 C Y N 132 SAM N7 N Y N 133 SAM C5 C Y N 134 SAM C6 C Y N 135 SAM N6 N N N 136 SAM N1 N Y N 137 SAM C2 C Y N 138 SAM N3 N Y N 139 SAM C4 C Y N 140 SAM HN1 H N N 141 SAM HN2 H N N 142 SAM HA H N N 143 SAM HB1 H N N 144 SAM HB2 H N N 145 SAM HG1 H N N 146 SAM HG2 H N N 147 SAM HE1 H N N 148 SAM HE2 H N N 149 SAM HE3 H N N 150 SAM "H5'1" H N N 151 SAM "H5'2" H N N 152 SAM "H4'" H N N 153 SAM "H3'" H N N 154 SAM "HO3'" H N N 155 SAM "H2'" H N N 156 SAM "HO2'" H N N 157 SAM "H1'" H N N 158 SAM H8 H N N 159 SAM HN61 H N N 160 SAM HN62 H N N 161 SAM H2 H N N 162 U OP3 O N N 163 U P P N N 164 U OP1 O N N 165 U OP2 O N N 166 U "O5'" O N N 167 U "C5'" C N N 168 U "C4'" C N R 169 U "O4'" O N N 170 U "C3'" C N S 171 U "O3'" O N N 172 U "C2'" C N R 173 U "O2'" O N N 174 U "C1'" C N R 175 U N1 N N N 176 U C2 C N N 177 U O2 O N N 178 U N3 N N N 179 U C4 C N N 180 U O4 O N N 181 U C5 C N N 182 U C6 C N N 183 U HOP3 H N N 184 U HOP2 H N N 185 U "H5'" H N N 186 U "H5''" H N N 187 U "H4'" H N N 188 U "H3'" H N N 189 U "HO3'" H N N 190 U "H2'" H N N 191 U "HO2'" H N N 192 U "H1'" H N N 193 U H3 H N N 194 U H5 H N N 195 U H6 H N N 196 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 SAM N CA sing N N 116 SAM N HN1 sing N N 117 SAM N HN2 sing N N 118 SAM CA C sing N N 119 SAM CA CB sing N N 120 SAM CA HA sing N N 121 SAM C O doub N N 122 SAM C OXT sing N N 123 SAM CB CG sing N N 124 SAM CB HB1 sing N N 125 SAM CB HB2 sing N N 126 SAM CG SD sing N N 127 SAM CG HG1 sing N N 128 SAM CG HG2 sing N N 129 SAM SD CE sing N N 130 SAM SD "C5'" sing N N 131 SAM CE HE1 sing N N 132 SAM CE HE2 sing N N 133 SAM CE HE3 sing N N 134 SAM "C5'" "C4'" sing N N 135 SAM "C5'" "H5'1" sing N N 136 SAM "C5'" "H5'2" sing N N 137 SAM "C4'" "O4'" sing N N 138 SAM "C4'" "C3'" sing N N 139 SAM "C4'" "H4'" sing N N 140 SAM "O4'" "C1'" sing N N 141 SAM "C3'" "O3'" sing N N 142 SAM "C3'" "C2'" sing N N 143 SAM "C3'" "H3'" sing N N 144 SAM "O3'" "HO3'" sing N N 145 SAM "C2'" "O2'" sing N N 146 SAM "C2'" "C1'" sing N N 147 SAM "C2'" "H2'" sing N N 148 SAM "O2'" "HO2'" sing N N 149 SAM "C1'" N9 sing N N 150 SAM "C1'" "H1'" sing N N 151 SAM N9 C8 sing Y N 152 SAM N9 C4 sing Y N 153 SAM C8 N7 doub Y N 154 SAM C8 H8 sing N N 155 SAM N7 C5 sing Y N 156 SAM C5 C6 sing Y N 157 SAM C5 C4 doub Y N 158 SAM C6 N6 sing N N 159 SAM C6 N1 doub Y N 160 SAM N6 HN61 sing N N 161 SAM N6 HN62 sing N N 162 SAM N1 C2 sing Y N 163 SAM C2 N3 doub Y N 164 SAM C2 H2 sing N N 165 SAM N3 C4 sing Y N 166 U OP3 P sing N N 167 U OP3 HOP3 sing N N 168 U P OP1 doub N N 169 U P OP2 sing N N 170 U P "O5'" sing N N 171 U OP2 HOP2 sing N N 172 U "O5'" "C5'" sing N N 173 U "C5'" "C4'" sing N N 174 U "C5'" "H5'" sing N N 175 U "C5'" "H5''" sing N N 176 U "C4'" "O4'" sing N N 177 U "C4'" "C3'" sing N N 178 U "C4'" "H4'" sing N N 179 U "O4'" "C1'" sing N N 180 U "C3'" "O3'" sing N N 181 U "C3'" "C2'" sing N N 182 U "C3'" "H3'" sing N N 183 U "O3'" "HO3'" sing N N 184 U "C2'" "O2'" sing N N 185 U "C2'" "C1'" sing N N 186 U "C2'" "H2'" sing N N 187 U "O2'" "HO2'" sing N N 188 U "C1'" N1 sing N N 189 U "C1'" "H1'" sing N N 190 U N1 C2 sing N N 191 U N1 C6 sing N N 192 U C2 O2 doub N N 193 U C2 N3 sing N N 194 U N3 C4 sing N N 195 U N3 H3 sing N N 196 U C4 O4 doub N N 197 U C4 C5 sing N N 198 U C5 C6 doub N N 199 U C5 H5 sing N N 200 U C6 H6 sing N N 201 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5FKF 'double helix' 5FKF 'a-form double helix' 5FKF 'hairpin loop' 5FKF tetraloop 5FKF 'mismatched base pair' 5FKF 'internal loop' 5FKF 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 93 1_555 -0.186 -0.113 0.935 10.943 1.631 -0.408 1 A_G1:C93_A A 1 ? A 93 ? 19 1 1 A G 2 1_555 A C 92 1_555 -0.153 -0.065 0.478 5.428 -7.571 -0.166 2 A_G2:C92_A A 2 ? A 92 ? 19 1 1 A C 3 1_555 A G 91 1_555 0.133 -0.122 0.282 -3.794 -7.949 1.511 3 A_C3:G91_A A 3 ? A 91 ? 19 1 1 A U 4 1_555 A A 90 1_555 -0.050 -0.115 0.271 -8.262 -7.441 2.919 4 A_U4:A90_A A 4 ? A 90 ? 20 1 1 A U 5 1_555 A G 89 1_555 1.337 -0.422 0.313 -3.998 -4.577 1.908 5 A_U5:G89_A A 5 ? A 89 ? 28 1 1 A A 6 1_555 A U 88 1_555 -0.091 -0.153 -0.075 2.683 -3.895 3.719 6 A_A6:U88_A A 6 ? A 88 ? 20 1 1 A U 7 1_555 A A 87 1_555 -0.062 -0.080 -0.114 2.748 -4.848 5.353 7 A_U7:A87_A A 7 ? A 87 ? 20 1 1 A C 8 1_555 A G 86 1_555 0.145 -0.055 0.137 2.513 2.382 0.621 8 A_C8:G86_A A 8 ? A 86 ? 19 1 1 A U 64 1_555 A A 85 1_555 0.021 -0.088 0.019 3.030 -5.013 0.707 9 A_U64:A85_A A 64 ? A 85 ? 20 1 1 A G 35 1_555 A A 20 1_555 6.215 -3.899 0.874 19.979 23.746 2.768 10 A_G35:A20_A A 35 ? A 20 ? 11 9 1 A A 36 1_555 A G 19 1_555 -7.560 -4.809 0.203 -11.313 -5.298 -47.837 11 A_A36:G19_A A 36 ? A 19 ? ? ? 1 A C 38 1_555 A G 17 1_555 0.152 -0.103 -0.250 17.405 -9.103 -0.488 12 A_C38:G17_A A 38 ? A 17 ? 19 1 1 A C 39 1_555 A G 16 1_555 0.180 -0.143 -0.559 14.421 -5.519 1.357 13 A_C39:G16_A A 39 ? A 16 ? 19 1 1 A C 40 1_555 A G 15 1_555 0.178 -0.131 -0.217 0.980 6.055 -0.938 14 A_C40:G15_A A 40 ? A 15 ? 19 1 1 A C 41 1_555 A G 13 1_555 -2.415 1.285 0.821 4.131 -19.887 40.005 15 A_C41:G13_A A 41 ? A 13 ? ? 1 1 A G 42 1_555 A C 60 1_555 -0.278 -0.186 -0.050 2.556 -9.932 0.578 16 A_G42:C60_A A 42 ? A 60 ? 19 1 1 A G 43 1_555 A C 59 1_555 -0.265 -0.069 0.039 -5.434 -13.847 4.188 17 A_G43:C59_A A 43 ? A 59 ? 19 1 1 A C 44 1_555 A G 58 1_555 -0.012 -0.109 0.591 -15.493 -11.793 -5.978 18 A_C44:G58_A A 44 ? A 58 ? 19 1 1 A G 21 1_555 A C 31 1_555 -0.284 -0.193 -0.247 2.274 -3.529 5.047 19 A_G21:C31_A A 21 ? A 31 ? 19 1 1 A C 22 1_555 A G 30 1_555 0.216 -0.131 -0.010 -4.153 -2.711 -0.043 20 A_C22:G30_A A 22 ? A 30 ? 19 1 1 A G 23 1_555 A C 29 1_555 -0.179 -0.088 0.444 9.077 5.408 1.501 21 A_G23:C29_A A 23 ? A 29 ? 19 1 1 A C 65 1_555 A G 28 1_555 0.111 -0.164 0.292 5.724 -5.000 -0.134 22 A_C65:G28_A A 65 ? A 28 ? 19 1 1 A C 66 1_555 A G 27 1_555 0.236 -0.183 0.029 3.139 -3.832 -0.316 23 A_C66:G27_A A 66 ? A 27 ? 19 1 1 A U 67 1_555 A U 26 1_555 2.587 -1.678 0.568 -4.191 -16.880 13.439 24 A_U67:U26_A A 67 ? A 26 ? 16 1 1 A G 68 1_555 A C 25 1_555 -0.119 -0.225 0.152 -0.153 -10.825 2.150 25 A_G68:C25_A A 68 ? A 25 ? 19 1 1 A C 47 1_555 A G 56 1_555 0.195 -0.210 -0.196 9.680 -2.451 0.107 26 A_C47:G56_A A 47 ? A 56 ? 19 1 1 A C 48 1_555 A G 55 1_555 0.197 -0.176 0.196 2.300 -3.199 -1.308 27 A_C48:G55_A A 48 ? A 55 ? 19 1 1 A A 49 1_555 A U 54 1_555 0.057 -0.116 0.332 6.886 9.526 4.736 28 A_A49:U54_A A 49 ? A 54 ? 20 1 1 A G 50 1_555 A A 53 1_555 7.312 -5.322 0.453 24.618 2.429 -15.585 29 A_G50:A53_A A 50 ? A 53 ? ? 10 1 A C 69 1_555 A G 82 1_555 0.109 -0.178 0.539 -2.124 -4.878 0.150 30 A_C69:G82_A A 69 ? A 82 ? 19 1 1 A A 70 1_555 A U 81 1_555 -0.011 -0.145 0.337 5.600 -10.262 -0.406 31 A_A70:U81_A A 70 ? A 81 ? 20 1 1 A G 71 1_555 A U 80 1_555 -1.775 -0.551 -0.149 3.174 -1.796 -3.566 32 A_G71:U80_A A 71 ? A 80 ? 28 1 1 A C 72 1_555 A G 79 1_555 0.270 -0.054 -0.196 5.847 -9.419 3.924 33 A_C72:G79_A A 72 ? A 79 ? 19 1 1 A G 73 1_555 A C 78 1_555 -0.119 -0.052 -0.559 -6.002 2.625 2.488 34 A_G73:C78_A A 73 ? A 78 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 93 1_555 A G 2 1_555 A C 92 1_555 0.347 -1.719 3.055 1.141 5.373 35.656 -3.460 -0.415 2.785 8.711 -1.850 36.063 1 AA_G1G2:C92C93_AA A 1 ? A 93 ? A 2 ? A 92 ? 1 A G 2 1_555 A C 92 1_555 A C 3 1_555 A G 91 1_555 -0.675 -1.973 3.290 -2.010 3.039 33.074 -3.946 0.848 3.136 5.318 3.517 33.269 2 AA_G2C3:G91C92_AA A 2 ? A 92 ? A 3 ? A 91 ? 1 A C 3 1_555 A G 91 1_555 A U 4 1_555 A A 90 1_555 0.079 -1.506 3.242 -1.376 11.297 32.902 -4.105 -0.325 2.594 19.242 2.344 34.763 3 AA_C3U4:A90G91_AA A 3 ? A 91 ? A 4 ? A 90 ? 1 A U 4 1_555 A A 90 1_555 A U 5 1_555 A G 89 1_555 -0.083 -0.647 3.275 0.458 7.360 35.670 -2.042 0.195 3.084 11.859 -0.737 36.400 4 AA_U4U5:G89A90_AA A 4 ? A 90 ? A 5 ? A 89 ? 1 A U 5 1_555 A G 89 1_555 A A 6 1_555 A U 88 1_555 -0.398 -1.174 2.926 2.434 11.745 28.213 -4.133 1.150 2.230 22.833 -4.731 30.609 5 AA_U5A6:U88G89_AA A 5 ? A 89 ? A 6 ? A 88 ? 1 A A 6 1_555 A U 88 1_555 A U 7 1_555 A A 87 1_555 0.464 -1.414 3.355 -1.728 8.408 29.099 -4.337 -1.222 2.814 16.291 3.348 30.313 6 AA_A6U7:A87U88_AA A 6 ? A 88 ? A 7 ? A 87 ? 1 A U 7 1_555 A A 87 1_555 A C 8 1_555 A G 86 1_555 0.196 -2.113 3.255 1.869 8.612 30.106 -5.388 -0.042 2.574 16.149 -3.504 31.340 7 AA_U7C8:G86A87_AA A 7 ? A 87 ? A 8 ? A 86 ? 1 A C 8 1_555 A G 86 1_555 A U 64 1_555 A A 85 1_555 -1.406 -1.572 3.164 3.444 2.448 42.627 -2.382 2.248 2.956 3.358 -4.724 42.827 8 AA_C8U64:A85G86_AA A 8 ? A 86 ? A 64 ? A 85 ? 1 A G 35 1_555 A A 20 1_555 A A 36 1_555 A G 19 1_555 -2.789 -0.194 3.981 -3.458 -20.375 -18.613 6.008 -6.767 2.200 47.746 -8.104 -27.744 9 AA_G35A36:G19A20_AA A 35 ? A 20 ? A 36 ? A 19 ? 1 A A 36 1_555 A G 19 1_555 A C 38 1_555 A G 17 1_555 1.710 -0.789 5.938 -10.760 14.529 106.287 -0.830 -1.313 5.704 9.037 6.693 107.351 10 AA_A36C38:G17G19_AA A 36 ? A 19 ? A 38 ? A 17 ? 1 A C 38 1_555 A G 17 1_555 A C 39 1_555 A G 16 1_555 0.264 -1.757 3.377 -0.112 12.281 34.511 -4.400 -0.435 2.620 19.935 0.182 36.569 11 AA_C38C39:G16G17_AA A 38 ? A 17 ? A 39 ? A 16 ? 1 A C 39 1_555 A G 16 1_555 A C 40 1_555 A G 15 1_555 -0.367 -2.333 3.825 -2.808 5.873 33.663 -4.988 0.130 3.400 10.024 4.792 34.268 12 AA_C39C40:G15G16_AA A 39 ? A 16 ? A 40 ? A 15 ? 1 A C 40 1_555 A G 15 1_555 A C 41 1_555 A G 13 1_555 3.210 -1.650 2.628 -3.699 14.928 24.144 -5.376 -7.010 0.969 31.883 7.899 28.564 13 AA_C40C41:G13G15_AA A 40 ? A 15 ? A 41 ? A 13 ? 1 A C 41 1_555 A G 13 1_555 A G 42 1_555 A C 60 1_555 1.615 0.484 3.861 -8.283 -2.176 67.710 0.526 -1.800 3.651 -1.945 7.404 68.185 14 AA_C41G42:C60G13_AA A 41 ? A 13 ? A 42 ? A 60 ? 1 A G 42 1_555 A C 60 1_555 A G 43 1_555 A C 59 1_555 0.467 -1.425 3.234 -2.054 5.572 33.857 -3.241 -1.095 2.937 9.477 3.493 34.359 15 AA_G42G43:C59C60_AA A 42 ? A 60 ? A 43 ? A 59 ? 1 A G 43 1_555 A C 59 1_555 A C 44 1_555 A G 58 1_555 -1.094 -1.494 3.436 -4.245 -1.029 37.256 -2.180 1.105 3.573 -1.604 6.616 37.503 16 AA_G43C44:G58C59_AA A 43 ? A 59 ? A 44 ? A 58 ? 1 A G 21 1_555 A C 31 1_555 A C 22 1_555 A G 30 1_555 0.199 -1.961 3.536 1.624 1.719 33.506 -3.695 -0.060 3.440 2.977 -2.812 33.587 17 AA_G21C22:G30C31_AA A 21 ? A 31 ? A 22 ? A 30 ? 1 A C 22 1_555 A G 30 1_555 A G 23 1_555 A C 29 1_555 0.144 -2.370 3.094 -1.383 -2.686 23.558 -4.885 -0.800 3.325 -6.544 3.369 23.748 18 AA_C22G23:C29G30_AA A 22 ? A 30 ? A 23 ? A 29 ? 1 A G 23 1_555 A C 29 1_555 A C 65 1_555 A G 28 1_555 -2.916 -0.900 3.255 -2.061 0.605 55.892 -0.995 2.990 3.343 0.645 2.198 55.930 19 AA_G23C65:G28C29_AA A 23 ? A 29 ? A 65 ? A 28 ? 1 A C 65 1_555 A G 28 1_555 A C 66 1_555 A G 27 1_555 -0.913 -1.987 3.151 -0.745 7.888 31.272 -4.834 1.525 2.606 14.346 1.355 32.236 20 AA_C65C66:G27G28_AA A 65 ? A 28 ? A 66 ? A 27 ? 1 A C 66 1_555 A G 27 1_555 A U 67 1_555 A U 26 1_555 1.101 -0.861 3.387 1.421 10.354 44.407 -2.034 -1.295 3.153 13.479 -1.850 45.560 21 AA_C66U67:U26G27_AA A 66 ? A 27 ? A 67 ? A 26 ? 1 A U 67 1_555 A U 26 1_555 A G 68 1_555 A C 25 1_555 -0.360 -1.025 2.751 8.504 11.146 27.988 -3.534 1.912 2.016 21.427 -16.349 31.240 22 AA_U67G68:C25U26_AA A 67 ? A 26 ? A 68 ? A 25 ? 1 A C 47 1_555 A G 56 1_555 A C 48 1_555 A G 55 1_555 0.627 -1.824 3.375 -3.025 6.091 39.000 -3.398 -1.276 3.013 9.040 4.490 39.566 23 AA_C47C48:G55G56_AA A 47 ? A 56 ? A 48 ? A 55 ? 1 A C 48 1_555 A G 55 1_555 A A 49 1_555 A U 54 1_555 0.170 -2.287 2.993 0.243 2.591 28.636 -5.120 -0.293 2.781 5.226 -0.490 28.752 24 AA_C48A49:U54G55_AA A 48 ? A 55 ? A 49 ? A 54 ? 1 A A 49 1_555 A U 54 1_555 A G 50 1_555 A A 53 1_555 -1.513 -1.182 2.783 0.739 3.733 55.945 -1.436 1.645 2.687 3.974 -0.787 56.064 25 AA_A49G50:A53U54_AA A 49 ? A 54 ? A 50 ? A 53 ? 1 A C 69 1_555 A G 82 1_555 A A 70 1_555 A U 81 1_555 -0.385 -1.619 2.699 0.126 4.510 29.084 -3.948 0.780 2.424 8.913 -0.250 29.424 26 AA_C69A70:U81G82_AA A 69 ? A 82 ? A 70 ? A 81 ? 1 A A 70 1_555 A U 81 1_555 A G 71 1_555 A U 80 1_555 -0.573 -1.955 2.867 -4.241 11.773 29.619 -5.184 0.442 2.024 21.843 7.869 32.100 27 AA_A70G71:U80U81_AA A 70 ? A 81 ? A 71 ? A 80 ? 1 A G 71 1_555 A U 80 1_555 A C 72 1_555 A G 79 1_555 0.106 -1.096 3.099 -0.655 7.061 39.823 -2.314 -0.221 2.869 10.268 0.952 40.424 28 AA_G71C72:G79U80_AA A 71 ? A 80 ? A 72 ? A 79 ? 1 A C 72 1_555 A G 79 1_555 A G 73 1_555 A C 78 1_555 -0.044 -2.001 3.806 -1.668 8.007 27.674 -5.948 -0.314 3.114 16.294 3.395 28.835 29 AA_C72G73:C78G79_AA A 72 ? A 79 ? A 73 ? A 78 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5FJC _pdbx_initial_refinement_model.details 'PDB ENTRY 5FJC' # _atom_sites.entry_id 5FKF _atom_sites.fract_transf_matrix[1][1] 0.016179 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016179 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006454 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BA C K N NA O P S # loop_