data_5GJ3 # _entry.id 5GJ3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5GJ3 pdb_00005gj3 10.2210/pdb5gj3/pdb WWPDB D_1300000860 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 5GIZ PDB . unspecified 5GJ0 PDB . unspecified 5GJ1 PDB . unspecified 5GJ2 PDB . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5GJ3 _pdbx_database_status.recvd_initial_deposition_date 2016-06-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rahman, M.M.' 1 'Naoe, Y.' 2 'Nakamura, N.' 3 'Shiro, Y.' 4 'Sugimoto, H.' 5 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proteins _citation.journal_id_ASTM PSFGEY _citation.journal_id_CSD 0867 _citation.journal_id_ISSN 1097-0134 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 85 _citation.language ? _citation.page_first 2217 _citation.page_last 2230 _citation.title 'Structural basis for binding and transfer of heme in bacterial heme-acquisition systems.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/prot.25386 _citation.pdbx_database_id_PubMed 28913898 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Naoe, Y.' 1 ? primary 'Nakamura, N.' 2 ? primary 'Rahman, M.M.' 3 ? primary 'Tosha, T.' 4 ? primary 'Nagatoishi, S.' 5 ? primary 'Tsumoto, K.' 6 ? primary 'Shiro, Y.' 7 ? primary 'Sugimoto, H.' 8 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5GJ3 _cell.details ? _cell.formula_units_Z ? _cell.length_a 67.326 _cell.length_a_esd ? _cell.length_b 86.338 _cell.length_b_esd ? _cell.length_c 118.806 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5GJ3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Periplasmic binding protein' 28246.318 1 ? ? 'heme binding domain, UNP residues 96-360' ? 2 non-polymer syn 'PROTOPORPHYRIN IX CONTAINING FE' 616.487 2 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 4 ? ? ? ? 4 water nat water 18.015 126 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'periplasmic heme-binding protein RhuT' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSERIVSLNGDITEIIFALGMGEYVVGVDSSATYPPERTKMLPNIGYQRRLSAEGILSLNPTLVIGDEAAGPPETLA QIRAAGVPLAITADPPSLDAPQQKIRFVAQALGIPQRGERLAAQVEAEIAAARDLARRITNPPHVLFLYLRGTDVQQVAG RNTAVDVMIAAAGGINAAADAGIVEFKPLSPEVVIAAQPDVLLVLDKGLESVGGVDGLLKIPGLADTPAGRQRRIIALDD LYLLGMGPRTGQALTDLTIAFYDAAQGSRP ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSERIVSLNGDITEIIFALGMGEYVVGVDSSATYPPERTKMLPNIGYQRRLSAEGILSLNPTLVIGDEAAGPPETLA QIRAAGVPLAITADPPSLDAPQQKIRFVAQALGIPQRGERLAAQVEAEIAAARDLARRITNPPHVLFLYLRGTDVQQVAG RNTAVDVMIAAAGGINAAADAGIVEFKPLSPEVVIAAQPDVLLVLDKGLESVGGVDGLLKIPGLADTPAGRQRRIIALDD LYLLGMGPRTGQALTDLTIAFYDAAQGSRP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 GLU n 1 7 ARG n 1 8 ILE n 1 9 VAL n 1 10 SER n 1 11 LEU n 1 12 ASN n 1 13 GLY n 1 14 ASP n 1 15 ILE n 1 16 THR n 1 17 GLU n 1 18 ILE n 1 19 ILE n 1 20 PHE n 1 21 ALA n 1 22 LEU n 1 23 GLY n 1 24 MET n 1 25 GLY n 1 26 GLU n 1 27 TYR n 1 28 VAL n 1 29 VAL n 1 30 GLY n 1 31 VAL n 1 32 ASP n 1 33 SER n 1 34 SER n 1 35 ALA n 1 36 THR n 1 37 TYR n 1 38 PRO n 1 39 PRO n 1 40 GLU n 1 41 ARG n 1 42 THR n 1 43 LYS n 1 44 MET n 1 45 LEU n 1 46 PRO n 1 47 ASN n 1 48 ILE n 1 49 GLY n 1 50 TYR n 1 51 GLN n 1 52 ARG n 1 53 ARG n 1 54 LEU n 1 55 SER n 1 56 ALA n 1 57 GLU n 1 58 GLY n 1 59 ILE n 1 60 LEU n 1 61 SER n 1 62 LEU n 1 63 ASN n 1 64 PRO n 1 65 THR n 1 66 LEU n 1 67 VAL n 1 68 ILE n 1 69 GLY n 1 70 ASP n 1 71 GLU n 1 72 ALA n 1 73 ALA n 1 74 GLY n 1 75 PRO n 1 76 PRO n 1 77 GLU n 1 78 THR n 1 79 LEU n 1 80 ALA n 1 81 GLN n 1 82 ILE n 1 83 ARG n 1 84 ALA n 1 85 ALA n 1 86 GLY n 1 87 VAL n 1 88 PRO n 1 89 LEU n 1 90 ALA n 1 91 ILE n 1 92 THR n 1 93 ALA n 1 94 ASP n 1 95 PRO n 1 96 PRO n 1 97 SER n 1 98 LEU n 1 99 ASP n 1 100 ALA n 1 101 PRO n 1 102 GLN n 1 103 GLN n 1 104 LYS n 1 105 ILE n 1 106 ARG n 1 107 PHE n 1 108 VAL n 1 109 ALA n 1 110 GLN n 1 111 ALA n 1 112 LEU n 1 113 GLY n 1 114 ILE n 1 115 PRO n 1 116 GLN n 1 117 ARG n 1 118 GLY n 1 119 GLU n 1 120 ARG n 1 121 LEU n 1 122 ALA n 1 123 ALA n 1 124 GLN n 1 125 VAL n 1 126 GLU n 1 127 ALA n 1 128 GLU n 1 129 ILE n 1 130 ALA n 1 131 ALA n 1 132 ALA n 1 133 ARG n 1 134 ASP n 1 135 LEU n 1 136 ALA n 1 137 ARG n 1 138 ARG n 1 139 ILE n 1 140 THR n 1 141 ASN n 1 142 PRO n 1 143 PRO n 1 144 HIS n 1 145 VAL n 1 146 LEU n 1 147 PHE n 1 148 LEU n 1 149 TYR n 1 150 LEU n 1 151 ARG n 1 152 GLY n 1 153 THR n 1 154 ASP n 1 155 VAL n 1 156 GLN n 1 157 GLN n 1 158 VAL n 1 159 ALA n 1 160 GLY n 1 161 ARG n 1 162 ASN n 1 163 THR n 1 164 ALA n 1 165 VAL n 1 166 ASP n 1 167 VAL n 1 168 MET n 1 169 ILE n 1 170 ALA n 1 171 ALA n 1 172 ALA n 1 173 GLY n 1 174 GLY n 1 175 ILE n 1 176 ASN n 1 177 ALA n 1 178 ALA n 1 179 ALA n 1 180 ASP n 1 181 ALA n 1 182 GLY n 1 183 ILE n 1 184 VAL n 1 185 GLU n 1 186 PHE n 1 187 LYS n 1 188 PRO n 1 189 LEU n 1 190 SER n 1 191 PRO n 1 192 GLU n 1 193 VAL n 1 194 VAL n 1 195 ILE n 1 196 ALA n 1 197 ALA n 1 198 GLN n 1 199 PRO n 1 200 ASP n 1 201 VAL n 1 202 LEU n 1 203 LEU n 1 204 VAL n 1 205 LEU n 1 206 ASP n 1 207 LYS n 1 208 GLY n 1 209 LEU n 1 210 GLU n 1 211 SER n 1 212 VAL n 1 213 GLY n 1 214 GLY n 1 215 VAL n 1 216 ASP n 1 217 GLY n 1 218 LEU n 1 219 LEU n 1 220 LYS n 1 221 ILE n 1 222 PRO n 1 223 GLY n 1 224 LEU n 1 225 ALA n 1 226 ASP n 1 227 THR n 1 228 PRO n 1 229 ALA n 1 230 GLY n 1 231 ARG n 1 232 GLN n 1 233 ARG n 1 234 ARG n 1 235 ILE n 1 236 ILE n 1 237 ALA n 1 238 LEU n 1 239 ASP n 1 240 ASP n 1 241 LEU n 1 242 TYR n 1 243 LEU n 1 244 LEU n 1 245 GLY n 1 246 MET n 1 247 GLY n 1 248 PRO n 1 249 ARG n 1 250 THR n 1 251 GLY n 1 252 GLN n 1 253 ALA n 1 254 LEU n 1 255 THR n 1 256 ASP n 1 257 LEU n 1 258 THR n 1 259 ILE n 1 260 ALA n 1 261 PHE n 1 262 TYR n 1 263 ASP n 1 264 ALA n 1 265 ALA n 1 266 GLN n 1 267 GLY n 1 268 SER n 1 269 ARG n 1 270 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 270 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene RoseRS_3565 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain RS-1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Roseiflexus sp. RS-1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 357808 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta2(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-6P-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A5UZ69_ROSS1 _struct_ref.pdbx_db_accession A5UZ69 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ERIVSLNGDITEIIFALGMGEYVVGVDSSATYPPERTKMLPNIGYQRRLSAEGILSLNPTLVIGDEAAGPPETLAQIRAA GVPLAITADPPSLDAPQQKIRFVAQALGIPQRGERLAAQVEAEIAAARDLARRITNPPHVLFLYLRGTDVQQVAGRNTAV DVMIAAAGGINAAADAGIVEFKPLSPEVVIAAQPDVLLVLDKGLESVGGVDGLLKIPGLADTPAGRQRRIIALDDLYLLG MGPRTGQALTDLTIAFYDAAQGSRP ; _struct_ref.pdbx_align_begin 96 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5GJ3 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 270 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A5UZ69 _struct_ref_seq.db_align_beg 96 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 360 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 96 _struct_ref_seq.pdbx_auth_seq_align_end 360 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5GJ3 GLY A 1 ? UNP A5UZ69 ? ? 'expression tag' 91 1 1 5GJ3 PRO A 2 ? UNP A5UZ69 ? ? 'expression tag' 92 2 1 5GJ3 LEU A 3 ? UNP A5UZ69 ? ? 'expression tag' 93 3 1 5GJ3 GLY A 4 ? UNP A5UZ69 ? ? 'expression tag' 94 4 1 5GJ3 SER A 5 ? UNP A5UZ69 ? ? 'expression tag' 95 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEM non-polymer . 'PROTOPORPHYRIN IX CONTAINING FE' HEME 'C34 H32 Fe N4 O4' 616.487 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5GJ3 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.06 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 59.75 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity 0.796 _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '5% PEG 8000, 0.1 M zinc acetate, and 50 mM MES' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details mirrors _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX225-HS' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-07-15 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL32XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.00 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL32XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5GJ3 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.000 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 23911 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.800 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.900 _reflns.pdbx_Rmerge_I_obs 0.114 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI 14.679 _reflns.pdbx_netI_over_sigmaI 8.100 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.000 2.030 ? ? ? ? ? ? ? 97.800 ? ? ? ? 0.544 ? ? ? ? ? ? ? ? 7.100 ? ? ? ? ? ? ? 1 1 ? ? 2.030 2.070 ? ? ? ? ? ? ? 99.400 ? ? ? ? 0.493 ? ? ? ? ? ? ? ? 7.300 ? ? ? ? ? ? ? 2 1 ? ? 2.070 2.110 ? ? ? ? ? ? ? 99.600 ? ? ? ? 0.442 ? ? ? ? ? ? ? ? 7.600 ? ? ? ? ? ? ? 3 1 ? ? 2.110 2.150 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.407 ? ? ? ? ? ? ? ? 7.900 ? ? ? ? ? ? ? 4 1 ? ? 2.150 2.200 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.349 ? ? ? ? ? ? ? ? 8.000 ? ? ? ? ? ? ? 5 1 ? ? 2.200 2.250 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.347 ? ? ? ? ? ? ? ? 8.000 ? ? ? ? ? ? ? 6 1 ? ? 2.250 2.310 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.301 ? ? ? ? ? ? ? ? 8.100 ? ? ? ? ? ? ? 7 1 ? ? 2.310 2.370 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.255 ? ? ? ? ? ? ? ? 8.100 ? ? ? ? ? ? ? 8 1 ? ? 2.370 2.440 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.240 ? ? ? ? ? ? ? ? 8.100 ? ? ? ? ? ? ? 9 1 ? ? 2.440 2.520 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.225 ? ? ? ? ? ? ? ? 8.100 ? ? ? ? ? ? ? 10 1 ? ? 2.520 2.610 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.195 ? ? ? ? ? ? ? ? 8.100 ? ? ? ? ? ? ? 11 1 ? ? 2.610 2.710 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.170 ? ? ? ? ? ? ? ? 8.100 ? ? ? ? ? ? ? 12 1 ? ? 2.710 2.840 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.159 ? ? ? ? ? ? ? ? 8.100 ? ? ? ? ? ? ? 13 1 ? ? 2.840 2.990 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.136 ? ? ? ? ? ? ? ? 8.200 ? ? ? ? ? ? ? 14 1 ? ? 2.990 3.170 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.126 ? ? ? ? ? ? ? ? 8.100 ? ? ? ? ? ? ? 15 1 ? ? 3.170 3.420 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.114 ? ? ? ? ? ? ? ? 8.100 ? ? ? ? ? ? ? 16 1 ? ? 3.420 3.760 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.096 ? ? ? ? ? ? ? ? 8.100 ? ? ? ? ? ? ? 17 1 ? ? 3.760 4.310 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.081 ? ? ? ? ? ? ? ? 8.100 ? ? ? ? ? ? ? 18 1 ? ? 4.310 5.430 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.067 ? ? ? ? ? ? ? ? 8.000 ? ? ? ? ? ? ? 19 1 ? ? 5.430 50.000 ? ? ? ? ? ? ? 99.800 ? ? ? ? 0.050 ? ? ? ? ? ? ? ? 7.600 ? ? ? ? ? ? ? 20 1 ? ? # _refine.aniso_B[1][1] 0.4000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][2] -0.2300 _refine.aniso_B[2][3] -0.0000 _refine.aniso_B[3][3] -0.1700 _refine.B_iso_max 71.600 _refine.B_iso_mean 26.4100 _refine.B_iso_min 11.860 _refine.correlation_coeff_Fo_to_Fc 0.9470 _refine.correlation_coeff_Fo_to_Fc_free 0.9270 _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5GJ3 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.0000 _refine.ls_d_res_low 43.2100 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 21312 _refine.ls_number_reflns_R_free 1157 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 94.4200 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1892 _refine.ls_R_factor_R_free 0.2243 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1873 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3MD9 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1640 _refine.pdbx_overall_ESU_R_Free 0.1500 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 3.1720 _refine.overall_SU_ML 0.0910 _refine.overall_SU_R_Cruickshank_DPI 0.1635 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.0000 _refine_hist.d_res_low 43.2100 _refine_hist.pdbx_number_atoms_ligand 90 _refine_hist.number_atoms_solvent 126 _refine_hist.number_atoms_total 2203 _refine_hist.pdbx_number_residues_total 270 _refine_hist.pdbx_B_iso_mean_ligand 25.57 _refine_hist.pdbx_B_iso_mean_solvent 34.43 _refine_hist.pdbx_number_atoms_protein 1987 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.016 0.019 2126 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 1.831 2.061 2928 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 5.651 5.000 271 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 39.282 23.924 79 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 13.609 15.000 324 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 22.068 15.000 18 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.145 0.200 332 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 0.022 1635 ? r_gen_planes_refined ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.0000 _refine_ls_shell.d_res_low 2.0520 _refine_ls_shell.number_reflns_all 1201 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 60 _refine_ls_shell.number_reflns_R_work 1141 _refine_ls_shell.percent_reflns_obs 69.5000 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2460 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.1750 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5GJ3 _struct.title 'Periplasmic heme-binding protein RhuT from Roseiflexus sp. RS-1 in two-heme bound form (holo-2)' _struct.pdbx_model_details 'Periplasmic heme-binding protein RhuT in ABC heme transporter system' _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5GJ3 _struct_keywords.text 'metal transport, TRANSPORT PROTEIN' _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 12 ? LEU A 22 ? ASN A 102 LEU A 112 1 ? 11 HELX_P HELX_P2 AA2 MET A 24 ? GLU A 26 ? MET A 114 GLU A 116 5 ? 3 HELX_P HELX_P3 AA3 PRO A 38 ? LYS A 43 ? PRO A 128 LYS A 133 1 ? 6 HELX_P HELX_P4 AA4 SER A 55 ? SER A 61 ? SER A 145 SER A 151 1 ? 7 HELX_P HELX_P5 AA5 PRO A 75 ? ALA A 85 ? PRO A 165 ALA A 175 1 ? 11 HELX_P HELX_P6 AA6 ASP A 99 ? LEU A 112 ? ASP A 189 LEU A 202 1 ? 14 HELX_P HELX_P7 AA7 ILE A 114 ? ARG A 137 ? ILE A 204 ARG A 227 1 ? 24 HELX_P HELX_P8 AA8 THR A 163 ? ALA A 172 ? THR A 253 ALA A 262 1 ? 10 HELX_P HELX_P9 AA9 ALA A 178 ? GLY A 182 ? ALA A 268 GLY A 272 5 ? 5 HELX_P HELX_P10 AB1 SER A 190 ? GLN A 198 ? SER A 280 GLN A 288 1 ? 9 HELX_P HELX_P11 AB2 ASP A 206 ? VAL A 212 ? ASP A 296 VAL A 302 1 ? 7 HELX_P HELX_P12 AB3 GLY A 213 ? LEU A 219 ? GLY A 303 LEU A 309 1 ? 7 HELX_P HELX_P13 AB4 GLY A 223 ? ASP A 226 ? GLY A 313 ASP A 316 5 ? 4 HELX_P HELX_P14 AB5 THR A 227 ? ARG A 233 ? THR A 317 ARG A 323 1 ? 7 HELX_P HELX_P15 AB6 ASP A 239 ? GLY A 245 ? ASP A 329 GLY A 335 1 ? 7 HELX_P HELX_P16 AB7 ARG A 249 ? SER A 268 ? ARG A 339 SER A 358 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLU 6 OE1 ? ? ? 1_555 F ZN . ZN ? ? A GLU 96 A ZN 405 1_555 ? ? ? ? ? ? ? 2.129 ? ? metalc2 metalc ? ? A GLU 6 OE1 ? ? ? 1_555 F ZN . ZN ? ? A GLU 96 A ZN 405 3_555 ? ? ? ? ? ? ? 2.128 ? ? metalc3 metalc ? ? A ASP 14 OD2 ? ? ? 1_555 D ZN . ZN ? ? A ASP 104 A ZN 403 1_555 ? ? ? ? ? ? ? 2.128 ? ? metalc4 metalc ? ? A TYR 50 OH ? ? ? 1_555 B HEM . FE ? ? A TYR 140 A HEM 401 1_555 ? ? ? ? ? ? ? 1.869 ? ? metalc5 metalc ? ? A ASP 70 OD2 ? ? ? 1_555 D ZN . ZN ? ? A ASP 160 A ZN 403 1_555 ? ? ? ? ? ? ? 2.034 ? ? metalc6 metalc ? ? A ASP 94 OD2 ? ? ? 1_555 D ZN . ZN ? ? A ASP 184 A ZN 403 1_555 ? ? ? ? ? ? ? 2.048 ? ? metalc7 metalc ? ? A HIS 144 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 234 A ZN 404 1_555 ? ? ? ? ? ? ? 2.119 ? ? metalc8 metalc ? ? A TYR 149 OH ? ? ? 1_555 C HEM . FE ? ? A TYR 239 A HEM 402 1_555 ? ? ? ? ? ? ? 2.057 ? ? metalc9 metalc ? ? A ASP 180 OD1 ? ? ? 1_555 E ZN . ZN ? ? A ASP 270 A ZN 404 1_555 ? ? ? ? ? ? ? 2.487 ? ? metalc10 metalc ? ? A ASP 180 OD2 ? ? ? 1_555 E ZN . ZN ? ? A ASP 270 A ZN 404 1_555 ? ? ? ? ? ? ? 2.080 ? ? metalc11 metalc ? ? A ASP 256 OD1 ? ? ? 1_555 G ZN . ZN ? ? A ASP 346 A ZN 406 1_555 ? ? ? ? ? ? ? 2.038 ? ? metalc12 metalc ? ? A ASP 256 OD1 ? ? ? 1_555 G ZN . ZN ? ? A ASP 346 A ZN 406 4_555 ? ? ? ? ? ? ? 2.038 ? ? metalc13 metalc ? ? B HEM . O1A ? ? ? 1_555 E ZN . ZN ? ? A HEM 401 A ZN 404 8_455 ? ? ? ? ? ? ? 2.125 ? ? metalc14 metalc ? ? C HEM . O1D ? ? ? 1_555 E ZN . ZN ? ? A HEM 402 A ZN 404 8_455 ? ? ? ? ? ? ? 2.092 ? ? metalc15 metalc ? ? D ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 403 A HOH 599 1_555 ? ? ? ? ? ? ? 1.950 ? ? metalc16 metalc ? ? F ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 405 A HOH 523 1_555 ? ? ? ? ? ? ? 2.398 ? ? metalc17 metalc ? ? F ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 405 A HOH 523 3_555 ? ? ? ? ? ? ? 2.398 ? ? metalc18 metalc ? ? F ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 405 A HOH 614 1_555 ? ? ? ? ? ? ? 2.220 ? ? metalc19 metalc ? ? F ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 405 A HOH 614 3_555 ? ? ? ? ? ? ? 2.219 ? ? metalc20 metalc ? ? G ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 406 A HOH 538 1_555 ? ? ? ? ? ? ? 2.108 ? ? metalc21 metalc ? ? G ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 406 A HOH 538 4_555 ? ? ? ? ? ? ? 2.108 ? ? metalc22 metalc ? ? G ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 406 A HOH 541 1_555 ? ? ? ? ? ? ? 2.029 ? ? metalc23 metalc ? ? G ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 406 A HOH 541 4_555 ? ? ? ? ? ? ? 2.029 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 37 A . ? TYR 127 A PRO 38 A ? PRO 128 A 1 -1.28 2 GLY 74 A . ? GLY 164 A PRO 75 A ? PRO 165 A 1 6.02 3 ARG 269 A . ? ARG 359 A PRO 270 A ? PRO 360 A 1 -2.77 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? AA3 ? 4 ? AA4 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA2 1 2 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? parallel AA4 2 3 ? parallel AA4 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 28 ? VAL A 31 ? VAL A 118 VAL A 121 AA1 2 ILE A 8 ? SER A 10 ? ILE A 98 SER A 100 AA1 3 LEU A 66 ? ASP A 70 ? LEU A 156 ASP A 160 AA1 4 LEU A 89 ? THR A 92 ? LEU A 179 THR A 182 AA2 1 GLY A 49 ? TYR A 50 ? GLY A 139 TYR A 140 AA2 2 ARG A 53 ? LEU A 54 ? ARG A 143 LEU A 144 AA3 1 ILE A 175 ? ASN A 176 ? ILE A 265 ASN A 266 AA3 2 HIS A 144 ? ARG A 151 ? HIS A 234 ARG A 241 AA3 3 VAL A 155 ? ALA A 159 ? VAL A 245 ALA A 249 AA3 4 PHE A 186 ? PRO A 188 ? PHE A 276 PRO A 278 AA4 1 ILE A 175 ? ASN A 176 ? ILE A 265 ASN A 266 AA4 2 HIS A 144 ? ARG A 151 ? HIS A 234 ARG A 241 AA4 3 VAL A 201 ? LEU A 205 ? VAL A 291 LEU A 295 AA4 4 ILE A 235 ? LEU A 238 ? ILE A 325 LEU A 328 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O VAL A 29 ? O VAL A 119 N ILE A 8 ? N ILE A 98 AA1 2 3 N VAL A 9 ? N VAL A 99 O LEU A 66 ? O LEU A 156 AA1 3 4 N VAL A 67 ? N VAL A 157 O ALA A 90 ? O ALA A 180 AA2 1 2 N TYR A 50 ? N TYR A 140 O ARG A 53 ? O ARG A 143 AA3 1 2 O ILE A 175 ? O ILE A 265 N VAL A 145 ? N VAL A 235 AA3 2 3 N TYR A 149 ? N TYR A 239 O GLN A 157 ? O GLN A 247 AA3 3 4 N VAL A 158 ? N VAL A 248 O LYS A 187 ? O LYS A 277 AA4 1 2 O ILE A 175 ? O ILE A 265 N VAL A 145 ? N VAL A 235 AA4 2 3 N LEU A 146 ? N LEU A 236 O LEU A 203 ? O LEU A 293 AA4 3 4 N LEU A 202 ? N LEU A 292 O ILE A 236 ? O ILE A 326 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A HEM 401 ? 12 'binding site for residue HEM A 401' AC2 Software A HEM 402 ? 9 'binding site for residue HEM A 402' AC3 Software A ZN 403 ? 4 'binding site for residue ZN A 403' AC4 Software A ZN 404 ? 4 'binding site for residue ZN A 404' AC5 Software A ZN 405 ? 6 'binding site for residue ZN A 405' AC6 Software A ZN 406 ? 6 'binding site for residue ZN A 406' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 TYR A 50 ? TYR A 140 . ? 1_555 ? 2 AC1 12 GLN A 51 ? GLN A 141 . ? 1_555 ? 3 AC1 12 ARG A 52 ? ARG A 142 . ? 1_555 ? 4 AC1 12 ARG A 53 ? ARG A 143 . ? 1_555 ? 5 AC1 12 HIS A 144 ? HIS A 234 . ? 8_455 ? 6 AC1 12 ASP A 180 ? ASP A 270 . ? 8_455 ? 7 AC1 12 ASP A 240 ? ASP A 330 . ? 1_555 ? 8 AC1 12 ARG A 269 ? ARG A 359 . ? 8_455 ? 9 AC1 12 HEM C . ? HEM A 402 . ? 1_555 ? 10 AC1 12 ZN E . ? ZN A 404 . ? 8_455 ? 11 AC1 12 HOH H . ? HOH A 507 . ? 8_455 ? 12 AC1 12 HOH H . ? HOH A 515 . ? 1_555 ? 13 AC2 9 HIS A 144 ? HIS A 234 . ? 8_455 ? 14 AC2 9 TYR A 149 ? TYR A 239 . ? 1_555 ? 15 AC2 9 ARG A 151 ? ARG A 241 . ? 1_555 ? 16 AC2 9 ILE A 175 ? ILE A 265 . ? 8_455 ? 17 AC2 9 ASP A 180 ? ASP A 270 . ? 8_455 ? 18 AC2 9 PHE A 186 ? PHE A 276 . ? 1_555 ? 19 AC2 9 ASP A 240 ? ASP A 330 . ? 1_555 ? 20 AC2 9 HEM B . ? HEM A 401 . ? 1_555 ? 21 AC2 9 ZN E . ? ZN A 404 . ? 8_455 ? 22 AC3 4 ASP A 14 ? ASP A 104 . ? 1_555 ? 23 AC3 4 ASP A 70 ? ASP A 160 . ? 1_555 ? 24 AC3 4 ASP A 94 ? ASP A 184 . ? 1_555 ? 25 AC3 4 HOH H . ? HOH A 599 . ? 1_555 ? 26 AC4 4 HIS A 144 ? HIS A 234 . ? 1_555 ? 27 AC4 4 ASP A 180 ? ASP A 270 . ? 1_555 ? 28 AC4 4 HEM B . ? HEM A 401 . ? 8_555 ? 29 AC4 4 HEM C . ? HEM A 402 . ? 8_555 ? 30 AC5 6 GLU A 6 ? GLU A 96 . ? 1_555 ? 31 AC5 6 GLU A 6 ? GLU A 96 . ? 3_555 ? 32 AC5 6 HOH H . ? HOH A 523 . ? 1_555 ? 33 AC5 6 HOH H . ? HOH A 523 . ? 3_555 ? 34 AC5 6 HOH H . ? HOH A 614 . ? 3_555 ? 35 AC5 6 HOH H . ? HOH A 614 . ? 1_555 ? 36 AC6 6 ASP A 256 ? ASP A 346 . ? 4_555 ? 37 AC6 6 ASP A 256 ? ASP A 346 . ? 1_555 ? 38 AC6 6 HOH H . ? HOH A 538 . ? 4_555 ? 39 AC6 6 HOH H . ? HOH A 538 . ? 1_555 ? 40 AC6 6 HOH H . ? HOH A 541 . ? 1_555 ? 41 AC6 6 HOH H . ? HOH A 541 . ? 4_555 ? # _atom_sites.entry_id 5GJ3 _atom_sites.fract_transf_matrix[1][1] 0.014853 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011582 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008417 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C FE N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 91 91 GLY GLY A . n A 1 2 PRO 2 92 92 PRO PRO A . n A 1 3 LEU 3 93 93 LEU LEU A . n A 1 4 GLY 4 94 94 GLY GLY A . n A 1 5 SER 5 95 95 SER SER A . n A 1 6 GLU 6 96 96 GLU GLU A . n A 1 7 ARG 7 97 97 ARG ARG A . n A 1 8 ILE 8 98 98 ILE ILE A . n A 1 9 VAL 9 99 99 VAL VAL A . n A 1 10 SER 10 100 100 SER SER A . n A 1 11 LEU 11 101 101 LEU LEU A . n A 1 12 ASN 12 102 102 ASN ASN A . n A 1 13 GLY 13 103 103 GLY GLY A . n A 1 14 ASP 14 104 104 ASP ASP A . n A 1 15 ILE 15 105 105 ILE ILE A . n A 1 16 THR 16 106 106 THR THR A . n A 1 17 GLU 17 107 107 GLU GLU A . n A 1 18 ILE 18 108 108 ILE ILE A . n A 1 19 ILE 19 109 109 ILE ILE A . n A 1 20 PHE 20 110 110 PHE PHE A . n A 1 21 ALA 21 111 111 ALA ALA A . n A 1 22 LEU 22 112 112 LEU LEU A . n A 1 23 GLY 23 113 113 GLY GLY A . n A 1 24 MET 24 114 114 MET MET A . n A 1 25 GLY 25 115 115 GLY GLY A . n A 1 26 GLU 26 116 116 GLU GLU A . n A 1 27 TYR 27 117 117 TYR TYR A . n A 1 28 VAL 28 118 118 VAL VAL A . n A 1 29 VAL 29 119 119 VAL VAL A . n A 1 30 GLY 30 120 120 GLY GLY A . n A 1 31 VAL 31 121 121 VAL VAL A . n A 1 32 ASP 32 122 122 ASP ASP A . n A 1 33 SER 33 123 123 SER SER A . n A 1 34 SER 34 124 124 SER SER A . n A 1 35 ALA 35 125 125 ALA ALA A . n A 1 36 THR 36 126 126 THR THR A . n A 1 37 TYR 37 127 127 TYR TYR A . n A 1 38 PRO 38 128 128 PRO PRO A . n A 1 39 PRO 39 129 129 PRO PRO A . n A 1 40 GLU 40 130 130 GLU GLU A . n A 1 41 ARG 41 131 131 ARG ARG A . n A 1 42 THR 42 132 132 THR THR A . n A 1 43 LYS 43 133 133 LYS LYS A . n A 1 44 MET 44 134 134 MET MET A . n A 1 45 LEU 45 135 135 LEU LEU A . n A 1 46 PRO 46 136 136 PRO PRO A . n A 1 47 ASN 47 137 137 ASN ASN A . n A 1 48 ILE 48 138 138 ILE ILE A . n A 1 49 GLY 49 139 139 GLY GLY A . n A 1 50 TYR 50 140 140 TYR TYR A . n A 1 51 GLN 51 141 141 GLN GLN A . n A 1 52 ARG 52 142 142 ARG ARG A . n A 1 53 ARG 53 143 143 ARG ARG A . n A 1 54 LEU 54 144 144 LEU LEU A . n A 1 55 SER 55 145 145 SER SER A . n A 1 56 ALA 56 146 146 ALA ALA A . n A 1 57 GLU 57 147 147 GLU GLU A . n A 1 58 GLY 58 148 148 GLY GLY A . n A 1 59 ILE 59 149 149 ILE ILE A . n A 1 60 LEU 60 150 150 LEU LEU A . n A 1 61 SER 61 151 151 SER SER A . n A 1 62 LEU 62 152 152 LEU LEU A . n A 1 63 ASN 63 153 153 ASN ASN A . n A 1 64 PRO 64 154 154 PRO PRO A . n A 1 65 THR 65 155 155 THR THR A . n A 1 66 LEU 66 156 156 LEU LEU A . n A 1 67 VAL 67 157 157 VAL VAL A . n A 1 68 ILE 68 158 158 ILE ILE A . n A 1 69 GLY 69 159 159 GLY GLY A . n A 1 70 ASP 70 160 160 ASP ASP A . n A 1 71 GLU 71 161 161 GLU GLU A . n A 1 72 ALA 72 162 162 ALA ALA A . n A 1 73 ALA 73 163 163 ALA ALA A . n A 1 74 GLY 74 164 164 GLY GLY A . n A 1 75 PRO 75 165 165 PRO PRO A . n A 1 76 PRO 76 166 166 PRO PRO A . n A 1 77 GLU 77 167 167 GLU GLU A . n A 1 78 THR 78 168 168 THR THR A . n A 1 79 LEU 79 169 169 LEU LEU A . n A 1 80 ALA 80 170 170 ALA ALA A . n A 1 81 GLN 81 171 171 GLN GLN A . n A 1 82 ILE 82 172 172 ILE ILE A . n A 1 83 ARG 83 173 173 ARG ARG A . n A 1 84 ALA 84 174 174 ALA ALA A . n A 1 85 ALA 85 175 175 ALA ALA A . n A 1 86 GLY 86 176 176 GLY GLY A . n A 1 87 VAL 87 177 177 VAL VAL A . n A 1 88 PRO 88 178 178 PRO PRO A . n A 1 89 LEU 89 179 179 LEU LEU A . n A 1 90 ALA 90 180 180 ALA ALA A . n A 1 91 ILE 91 181 181 ILE ILE A . n A 1 92 THR 92 182 182 THR THR A . n A 1 93 ALA 93 183 183 ALA ALA A . n A 1 94 ASP 94 184 184 ASP ASP A . n A 1 95 PRO 95 185 185 PRO PRO A . n A 1 96 PRO 96 186 186 PRO PRO A . n A 1 97 SER 97 187 187 SER SER A . n A 1 98 LEU 98 188 188 LEU LEU A . n A 1 99 ASP 99 189 189 ASP ASP A . n A 1 100 ALA 100 190 190 ALA ALA A . n A 1 101 PRO 101 191 191 PRO PRO A . n A 1 102 GLN 102 192 192 GLN GLN A . n A 1 103 GLN 103 193 193 GLN GLN A . n A 1 104 LYS 104 194 194 LYS LYS A . n A 1 105 ILE 105 195 195 ILE ILE A . n A 1 106 ARG 106 196 196 ARG ARG A . n A 1 107 PHE 107 197 197 PHE PHE A . n A 1 108 VAL 108 198 198 VAL VAL A . n A 1 109 ALA 109 199 199 ALA ALA A . n A 1 110 GLN 110 200 200 GLN GLN A . n A 1 111 ALA 111 201 201 ALA ALA A . n A 1 112 LEU 112 202 202 LEU LEU A . n A 1 113 GLY 113 203 203 GLY GLY A . n A 1 114 ILE 114 204 204 ILE ILE A . n A 1 115 PRO 115 205 205 PRO PRO A . n A 1 116 GLN 116 206 206 GLN GLN A . n A 1 117 ARG 117 207 207 ARG ARG A . n A 1 118 GLY 118 208 208 GLY GLY A . n A 1 119 GLU 119 209 209 GLU GLU A . n A 1 120 ARG 120 210 210 ARG ARG A . n A 1 121 LEU 121 211 211 LEU LEU A . n A 1 122 ALA 122 212 212 ALA ALA A . n A 1 123 ALA 123 213 213 ALA ALA A . n A 1 124 GLN 124 214 214 GLN GLN A . n A 1 125 VAL 125 215 215 VAL VAL A . n A 1 126 GLU 126 216 216 GLU GLU A . n A 1 127 ALA 127 217 217 ALA ALA A . n A 1 128 GLU 128 218 218 GLU GLU A . n A 1 129 ILE 129 219 219 ILE ILE A . n A 1 130 ALA 130 220 220 ALA ALA A . n A 1 131 ALA 131 221 221 ALA ALA A . n A 1 132 ALA 132 222 222 ALA ALA A . n A 1 133 ARG 133 223 223 ARG ARG A . n A 1 134 ASP 134 224 224 ASP ASP A . n A 1 135 LEU 135 225 225 LEU LEU A . n A 1 136 ALA 136 226 226 ALA ALA A . n A 1 137 ARG 137 227 227 ARG ARG A . n A 1 138 ARG 138 228 228 ARG ARG A . n A 1 139 ILE 139 229 229 ILE ILE A . n A 1 140 THR 140 230 230 THR THR A . n A 1 141 ASN 141 231 231 ASN ASN A . n A 1 142 PRO 142 232 232 PRO PRO A . n A 1 143 PRO 143 233 233 PRO PRO A . n A 1 144 HIS 144 234 234 HIS HIS A . n A 1 145 VAL 145 235 235 VAL VAL A . n A 1 146 LEU 146 236 236 LEU LEU A . n A 1 147 PHE 147 237 237 PHE PHE A . n A 1 148 LEU 148 238 238 LEU LEU A . n A 1 149 TYR 149 239 239 TYR TYR A . n A 1 150 LEU 150 240 240 LEU LEU A . n A 1 151 ARG 151 241 241 ARG ARG A . n A 1 152 GLY 152 242 242 GLY GLY A . n A 1 153 THR 153 243 243 THR THR A . n A 1 154 ASP 154 244 244 ASP ASP A . n A 1 155 VAL 155 245 245 VAL VAL A . n A 1 156 GLN 156 246 246 GLN GLN A . n A 1 157 GLN 157 247 247 GLN GLN A . n A 1 158 VAL 158 248 248 VAL VAL A . n A 1 159 ALA 159 249 249 ALA ALA A . n A 1 160 GLY 160 250 250 GLY GLY A . n A 1 161 ARG 161 251 251 ARG ARG A . n A 1 162 ASN 162 252 252 ASN ASN A . n A 1 163 THR 163 253 253 THR THR A . n A 1 164 ALA 164 254 254 ALA ALA A . n A 1 165 VAL 165 255 255 VAL VAL A . n A 1 166 ASP 166 256 256 ASP ASP A . n A 1 167 VAL 167 257 257 VAL VAL A . n A 1 168 MET 168 258 258 MET MET A . n A 1 169 ILE 169 259 259 ILE ILE A . n A 1 170 ALA 170 260 260 ALA ALA A . n A 1 171 ALA 171 261 261 ALA ALA A . n A 1 172 ALA 172 262 262 ALA ALA A . n A 1 173 GLY 173 263 263 GLY GLY A . n A 1 174 GLY 174 264 264 GLY GLY A . n A 1 175 ILE 175 265 265 ILE ILE A . n A 1 176 ASN 176 266 266 ASN ASN A . n A 1 177 ALA 177 267 267 ALA ALA A . n A 1 178 ALA 178 268 268 ALA ALA A . n A 1 179 ALA 179 269 269 ALA ALA A . n A 1 180 ASP 180 270 270 ASP ASP A . n A 1 181 ALA 181 271 271 ALA ALA A . n A 1 182 GLY 182 272 272 GLY GLY A . n A 1 183 ILE 183 273 273 ILE ILE A . n A 1 184 VAL 184 274 274 VAL VAL A . n A 1 185 GLU 185 275 275 GLU GLU A . n A 1 186 PHE 186 276 276 PHE PHE A . n A 1 187 LYS 187 277 277 LYS LYS A . n A 1 188 PRO 188 278 278 PRO PRO A . n A 1 189 LEU 189 279 279 LEU LEU A . n A 1 190 SER 190 280 280 SER SER A . n A 1 191 PRO 191 281 281 PRO PRO A . n A 1 192 GLU 192 282 282 GLU GLU A . n A 1 193 VAL 193 283 283 VAL VAL A . n A 1 194 VAL 194 284 284 VAL VAL A . n A 1 195 ILE 195 285 285 ILE ILE A . n A 1 196 ALA 196 286 286 ALA ALA A . n A 1 197 ALA 197 287 287 ALA ALA A . n A 1 198 GLN 198 288 288 GLN GLN A . n A 1 199 PRO 199 289 289 PRO PRO A . n A 1 200 ASP 200 290 290 ASP ASP A . n A 1 201 VAL 201 291 291 VAL VAL A . n A 1 202 LEU 202 292 292 LEU LEU A . n A 1 203 LEU 203 293 293 LEU LEU A . n A 1 204 VAL 204 294 294 VAL VAL A . n A 1 205 LEU 205 295 295 LEU LEU A . n A 1 206 ASP 206 296 296 ASP ASP A . n A 1 207 LYS 207 297 297 LYS LYS A . n A 1 208 GLY 208 298 298 GLY GLY A . n A 1 209 LEU 209 299 299 LEU LEU A . n A 1 210 GLU 210 300 300 GLU GLU A . n A 1 211 SER 211 301 301 SER SER A . n A 1 212 VAL 212 302 302 VAL VAL A . n A 1 213 GLY 213 303 303 GLY GLY A . n A 1 214 GLY 214 304 304 GLY GLY A . n A 1 215 VAL 215 305 305 VAL VAL A . n A 1 216 ASP 216 306 306 ASP ASP A . n A 1 217 GLY 217 307 307 GLY GLY A . n A 1 218 LEU 218 308 308 LEU LEU A . n A 1 219 LEU 219 309 309 LEU LEU A . n A 1 220 LYS 220 310 310 LYS LYS A . n A 1 221 ILE 221 311 311 ILE ILE A . n A 1 222 PRO 222 312 312 PRO PRO A . n A 1 223 GLY 223 313 313 GLY GLY A . n A 1 224 LEU 224 314 314 LEU LEU A . n A 1 225 ALA 225 315 315 ALA ALA A . n A 1 226 ASP 226 316 316 ASP ASP A . n A 1 227 THR 227 317 317 THR THR A . n A 1 228 PRO 228 318 318 PRO PRO A . n A 1 229 ALA 229 319 319 ALA ALA A . n A 1 230 GLY 230 320 320 GLY GLY A . n A 1 231 ARG 231 321 321 ARG ARG A . n A 1 232 GLN 232 322 322 GLN GLN A . n A 1 233 ARG 233 323 323 ARG ARG A . n A 1 234 ARG 234 324 324 ARG ARG A . n A 1 235 ILE 235 325 325 ILE ILE A . n A 1 236 ILE 236 326 326 ILE ILE A . n A 1 237 ALA 237 327 327 ALA ALA A . n A 1 238 LEU 238 328 328 LEU LEU A . n A 1 239 ASP 239 329 329 ASP ASP A . n A 1 240 ASP 240 330 330 ASP ASP A . n A 1 241 LEU 241 331 331 LEU LEU A . n A 1 242 TYR 242 332 332 TYR TYR A . n A 1 243 LEU 243 333 333 LEU LEU A . n A 1 244 LEU 244 334 334 LEU LEU A . n A 1 245 GLY 245 335 335 GLY GLY A . n A 1 246 MET 246 336 336 MET MET A . n A 1 247 GLY 247 337 337 GLY GLY A . n A 1 248 PRO 248 338 338 PRO PRO A . n A 1 249 ARG 249 339 339 ARG ARG A . n A 1 250 THR 250 340 340 THR THR A . n A 1 251 GLY 251 341 341 GLY GLY A . n A 1 252 GLN 252 342 342 GLN GLN A . n A 1 253 ALA 253 343 343 ALA ALA A . n A 1 254 LEU 254 344 344 LEU LEU A . n A 1 255 THR 255 345 345 THR THR A . n A 1 256 ASP 256 346 346 ASP ASP A . n A 1 257 LEU 257 347 347 LEU LEU A . n A 1 258 THR 258 348 348 THR THR A . n A 1 259 ILE 259 349 349 ILE ILE A . n A 1 260 ALA 260 350 350 ALA ALA A . n A 1 261 PHE 261 351 351 PHE PHE A . n A 1 262 TYR 262 352 352 TYR TYR A . n A 1 263 ASP 263 353 353 ASP ASP A . n A 1 264 ALA 264 354 354 ALA ALA A . n A 1 265 ALA 265 355 355 ALA ALA A . n A 1 266 GLN 266 356 356 GLN GLN A . n A 1 267 GLY 267 357 357 GLY GLY A . n A 1 268 SER 268 358 358 SER SER A . n A 1 269 ARG 269 359 359 ARG ARG A . n A 1 270 PRO 270 360 360 PRO PRO A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM 1 401 401 HEM HEM A . C 2 HEM 1 402 402 HEM HEM A . D 3 ZN 1 403 403 ZN ZN A . E 3 ZN 1 404 404 ZN ZN A . F 3 ZN 1 405 405 ZN ZN A . G 3 ZN 1 406 406 ZN ZN A . H 4 HOH 1 501 563 HOH HOH A . H 4 HOH 2 502 598 HOH HOH A . H 4 HOH 3 503 590 HOH HOH A . H 4 HOH 4 504 502 HOH HOH A . H 4 HOH 5 505 509 HOH HOH A . H 4 HOH 6 506 579 HOH HOH A . H 4 HOH 7 507 549 HOH HOH A . H 4 HOH 8 508 580 HOH HOH A . H 4 HOH 9 509 528 HOH HOH A . H 4 HOH 10 510 555 HOH HOH A . H 4 HOH 11 511 526 HOH HOH A . H 4 HOH 12 512 512 HOH HOH A . H 4 HOH 13 513 532 HOH HOH A . H 4 HOH 14 514 558 HOH HOH A . H 4 HOH 15 515 589 HOH HOH A . H 4 HOH 16 516 554 HOH HOH A . H 4 HOH 17 517 506 HOH HOH A . H 4 HOH 18 518 570 HOH HOH A . H 4 HOH 19 519 504 HOH HOH A . H 4 HOH 20 520 521 HOH HOH A . H 4 HOH 21 521 599 HOH HOH A . H 4 HOH 22 522 566 HOH HOH A . H 4 HOH 23 523 525 HOH HOH A . H 4 HOH 24 524 507 HOH HOH A . H 4 HOH 25 525 511 HOH HOH A . H 4 HOH 26 526 534 HOH HOH A . H 4 HOH 27 527 539 HOH HOH A . H 4 HOH 28 528 519 HOH HOH A . H 4 HOH 29 529 510 HOH HOH A . H 4 HOH 30 530 515 HOH HOH A . H 4 HOH 31 531 581 HOH HOH A . H 4 HOH 32 532 595 HOH HOH A . H 4 HOH 33 533 517 HOH HOH A . H 4 HOH 34 534 565 HOH HOH A . H 4 HOH 35 535 606 HOH HOH A . H 4 HOH 36 536 601 HOH HOH A . H 4 HOH 37 537 586 HOH HOH A . H 4 HOH 38 538 592 HOH HOH A . H 4 HOH 39 539 574 HOH HOH A . H 4 HOH 40 540 524 HOH HOH A . H 4 HOH 41 541 561 HOH HOH A . H 4 HOH 42 542 578 HOH HOH A . H 4 HOH 43 543 543 HOH HOH A . H 4 HOH 44 544 619 HOH HOH A . H 4 HOH 45 545 501 HOH HOH A . H 4 HOH 46 546 587 HOH HOH A . H 4 HOH 47 547 620 HOH HOH A . H 4 HOH 48 548 518 HOH HOH A . H 4 HOH 49 549 605 HOH HOH A . H 4 HOH 50 550 571 HOH HOH A . H 4 HOH 51 551 538 HOH HOH A . H 4 HOH 52 552 608 HOH HOH A . H 4 HOH 53 553 614 HOH HOH A . H 4 HOH 54 554 623 HOH HOH A . H 4 HOH 55 555 505 HOH HOH A . H 4 HOH 56 556 508 HOH HOH A . H 4 HOH 57 557 541 HOH HOH A . H 4 HOH 58 558 562 HOH HOH A . H 4 HOH 59 559 568 HOH HOH A . H 4 HOH 60 560 527 HOH HOH A . H 4 HOH 61 561 514 HOH HOH A . H 4 HOH 62 562 523 HOH HOH A . H 4 HOH 63 563 572 HOH HOH A . H 4 HOH 64 564 530 HOH HOH A . H 4 HOH 65 565 594 HOH HOH A . H 4 HOH 66 566 533 HOH HOH A . H 4 HOH 67 567 596 HOH HOH A . H 4 HOH 68 568 540 HOH HOH A . H 4 HOH 69 569 602 HOH HOH A . H 4 HOH 70 570 576 HOH HOH A . H 4 HOH 71 571 536 HOH HOH A . H 4 HOH 72 572 609 HOH HOH A . H 4 HOH 73 573 546 HOH HOH A . H 4 HOH 74 574 547 HOH HOH A . H 4 HOH 75 575 616 HOH HOH A . H 4 HOH 76 576 503 HOH HOH A . H 4 HOH 77 577 600 HOH HOH A . H 4 HOH 78 578 582 HOH HOH A . H 4 HOH 79 579 610 HOH HOH A . H 4 HOH 80 580 520 HOH HOH A . H 4 HOH 81 581 548 HOH HOH A . H 4 HOH 82 582 545 HOH HOH A . H 4 HOH 83 583 622 HOH HOH A . H 4 HOH 84 584 552 HOH HOH A . H 4 HOH 85 585 560 HOH HOH A . H 4 HOH 86 586 615 HOH HOH A . H 4 HOH 87 587 553 HOH HOH A . H 4 HOH 88 588 613 HOH HOH A . H 4 HOH 89 589 607 HOH HOH A . H 4 HOH 90 590 567 HOH HOH A . H 4 HOH 91 591 535 HOH HOH A . H 4 HOH 92 592 585 HOH HOH A . H 4 HOH 93 593 583 HOH HOH A . H 4 HOH 94 594 544 HOH HOH A . H 4 HOH 95 595 529 HOH HOH A . H 4 HOH 96 596 575 HOH HOH A . H 4 HOH 97 597 603 HOH HOH A . H 4 HOH 98 598 611 HOH HOH A . H 4 HOH 99 599 516 HOH HOH A . H 4 HOH 100 600 573 HOH HOH A . H 4 HOH 101 601 593 HOH HOH A . H 4 HOH 102 602 542 HOH HOH A . H 4 HOH 103 603 557 HOH HOH A . H 4 HOH 104 604 569 HOH HOH A . H 4 HOH 105 605 564 HOH HOH A . H 4 HOH 106 606 621 HOH HOH A . H 4 HOH 107 607 588 HOH HOH A . H 4 HOH 108 608 513 HOH HOH A . H 4 HOH 109 609 577 HOH HOH A . H 4 HOH 110 610 556 HOH HOH A . H 4 HOH 111 611 626 HOH HOH A . H 4 HOH 112 612 584 HOH HOH A . H 4 HOH 113 613 522 HOH HOH A . H 4 HOH 114 614 591 HOH HOH A . H 4 HOH 115 615 604 HOH HOH A . H 4 HOH 116 616 531 HOH HOH A . H 4 HOH 117 617 612 HOH HOH A . H 4 HOH 118 618 559 HOH HOH A . H 4 HOH 119 619 597 HOH HOH A . H 4 HOH 120 620 551 HOH HOH A . H 4 HOH 121 621 537 HOH HOH A . H 4 HOH 122 622 550 HOH HOH A . H 4 HOH 123 623 625 HOH HOH A . H 4 HOH 124 624 617 HOH HOH A . H 4 HOH 125 625 624 HOH HOH A . H 4 HOH 126 626 618 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 820 ? 1 MORE -47 ? 1 'SSA (A^2)' 12630 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A ZN 405 ? F ZN . 2 1 A ZN 406 ? G ZN . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLU 6 ? A GLU 96 ? 1_555 ZN ? F ZN . ? A ZN 405 ? 1_555 OE1 ? A GLU 6 ? A GLU 96 ? 1_555 0.0 ? 2 OE1 ? A GLU 6 ? A GLU 96 ? 1_555 ZN ? F ZN . ? A ZN 405 ? 1_555 O ? H HOH . ? A HOH 523 ? 1_555 83.9 ? 3 OE1 ? A GLU 6 ? A GLU 96 ? 1_555 ZN ? F ZN . ? A ZN 405 ? 1_555 O ? H HOH . ? A HOH 523 ? 1_555 83.9 ? 4 OE1 ? A GLU 6 ? A GLU 96 ? 1_555 ZN ? F ZN . ? A ZN 405 ? 1_555 O ? H HOH . ? A HOH 523 ? 3_555 89.8 ? 5 OE1 ? A GLU 6 ? A GLU 96 ? 1_555 ZN ? F ZN . ? A ZN 405 ? 1_555 O ? H HOH . ? A HOH 523 ? 3_555 89.8 ? 6 O ? H HOH . ? A HOH 523 ? 1_555 ZN ? F ZN . ? A ZN 405 ? 1_555 O ? H HOH . ? A HOH 523 ? 3_555 167.5 ? 7 OE1 ? A GLU 6 ? A GLU 96 ? 1_555 ZN ? F ZN . ? A ZN 405 ? 1_555 O ? H HOH . ? A HOH 614 ? 1_555 106.5 ? 8 OE1 ? A GLU 6 ? A GLU 96 ? 1_555 ZN ? F ZN . ? A ZN 405 ? 1_555 O ? H HOH . ? A HOH 614 ? 1_555 106.5 ? 9 O ? H HOH . ? A HOH 523 ? 1_555 ZN ? F ZN . ? A ZN 405 ? 1_555 O ? H HOH . ? A HOH 614 ? 1_555 90.0 ? 10 O ? H HOH . ? A HOH 523 ? 3_555 ZN ? F ZN . ? A ZN 405 ? 1_555 O ? H HOH . ? A HOH 614 ? 1_555 102.1 ? 11 OE1 ? A GLU 6 ? A GLU 96 ? 1_555 ZN ? F ZN . ? A ZN 405 ? 1_555 O ? H HOH . ? A HOH 614 ? 3_555 134.1 ? 12 OE1 ? A GLU 6 ? A GLU 96 ? 1_555 ZN ? F ZN . ? A ZN 405 ? 1_555 O ? H HOH . ? A HOH 614 ? 3_555 134.1 ? 13 O ? H HOH . ? A HOH 523 ? 1_555 ZN ? F ZN . ? A ZN 405 ? 1_555 O ? H HOH . ? A HOH 614 ? 3_555 102.1 ? 14 O ? H HOH . ? A HOH 523 ? 3_555 ZN ? F ZN . ? A ZN 405 ? 1_555 O ? H HOH . ? A HOH 614 ? 3_555 90.0 ? 15 O ? H HOH . ? A HOH 614 ? 1_555 ZN ? F ZN . ? A ZN 405 ? 1_555 O ? H HOH . ? A HOH 614 ? 3_555 29.6 ? 16 OD2 ? A ASP 14 ? A ASP 104 ? 1_555 ZN ? D ZN . ? A ZN 403 ? 1_555 OD2 ? A ASP 70 ? A ASP 160 ? 1_555 97.5 ? 17 OD2 ? A ASP 14 ? A ASP 104 ? 1_555 ZN ? D ZN . ? A ZN 403 ? 1_555 OD2 ? A ASP 94 ? A ASP 184 ? 1_555 100.6 ? 18 OD2 ? A ASP 70 ? A ASP 160 ? 1_555 ZN ? D ZN . ? A ZN 403 ? 1_555 OD2 ? A ASP 94 ? A ASP 184 ? 1_555 101.8 ? 19 OD2 ? A ASP 14 ? A ASP 104 ? 1_555 ZN ? D ZN . ? A ZN 403 ? 1_555 O ? H HOH . ? A HOH 599 ? 1_555 123.3 ? 20 OD2 ? A ASP 70 ? A ASP 160 ? 1_555 ZN ? D ZN . ? A ZN 403 ? 1_555 O ? H HOH . ? A HOH 599 ? 1_555 108.6 ? 21 OD2 ? A ASP 94 ? A ASP 184 ? 1_555 ZN ? D ZN . ? A ZN 403 ? 1_555 O ? H HOH . ? A HOH 599 ? 1_555 120.9 ? 22 OH ? A TYR 50 ? A TYR 140 ? 1_555 FE ? B HEM . ? A HEM 401 ? 1_555 NA ? B HEM . ? A HEM 401 ? 1_555 90.0 ? 23 OH ? A TYR 50 ? A TYR 140 ? 1_555 FE ? B HEM . ? A HEM 401 ? 1_555 NB ? B HEM . ? A HEM 401 ? 1_555 91.6 ? 24 NA ? B HEM . ? A HEM 401 ? 1_555 FE ? B HEM . ? A HEM 401 ? 1_555 NB ? B HEM . ? A HEM 401 ? 1_555 86.8 ? 25 OH ? A TYR 50 ? A TYR 140 ? 1_555 FE ? B HEM . ? A HEM 401 ? 1_555 NC ? B HEM . ? A HEM 401 ? 1_555 91.8 ? 26 NA ? B HEM . ? A HEM 401 ? 1_555 FE ? B HEM . ? A HEM 401 ? 1_555 NC ? B HEM . ? A HEM 401 ? 1_555 178.2 ? 27 NB ? B HEM . ? A HEM 401 ? 1_555 FE ? B HEM . ? A HEM 401 ? 1_555 NC ? B HEM . ? A HEM 401 ? 1_555 92.9 ? 28 OH ? A TYR 50 ? A TYR 140 ? 1_555 FE ? B HEM . ? A HEM 401 ? 1_555 ND ? B HEM . ? A HEM 401 ? 1_555 90.2 ? 29 NA ? B HEM . ? A HEM 401 ? 1_555 FE ? B HEM . ? A HEM 401 ? 1_555 ND ? B HEM . ? A HEM 401 ? 1_555 93.5 ? 30 NB ? B HEM . ? A HEM 401 ? 1_555 FE ? B HEM . ? A HEM 401 ? 1_555 ND ? B HEM . ? A HEM 401 ? 1_555 178.2 ? 31 NC ? B HEM . ? A HEM 401 ? 1_555 FE ? B HEM . ? A HEM 401 ? 1_555 ND ? B HEM . ? A HEM 401 ? 1_555 86.7 ? 32 NE2 ? A HIS 144 ? A HIS 234 ? 1_555 ZN ? E ZN . ? A ZN 404 ? 1_555 OD1 ? A ASP 180 ? A ASP 270 ? 1_555 153.6 ? 33 NE2 ? A HIS 144 ? A HIS 234 ? 1_555 ZN ? E ZN . ? A ZN 404 ? 1_555 OD2 ? A ASP 180 ? A ASP 270 ? 1_555 99.2 ? 34 OD1 ? A ASP 180 ? A ASP 270 ? 1_555 ZN ? E ZN . ? A ZN 404 ? 1_555 OD2 ? A ASP 180 ? A ASP 270 ? 1_555 55.1 ? 35 NE2 ? A HIS 144 ? A HIS 234 ? 1_555 ZN ? E ZN . ? A ZN 404 ? 1_555 O1A ? B HEM . ? A HEM 401 ? 1_555 85.5 ? 36 OD1 ? A ASP 180 ? A ASP 270 ? 1_555 ZN ? E ZN . ? A ZN 404 ? 1_555 O1A ? B HEM . ? A HEM 401 ? 1_555 80.4 ? 37 OD2 ? A ASP 180 ? A ASP 270 ? 1_555 ZN ? E ZN . ? A ZN 404 ? 1_555 O1A ? B HEM . ? A HEM 401 ? 1_555 47.5 ? 38 NE2 ? A HIS 144 ? A HIS 234 ? 1_555 ZN ? E ZN . ? A ZN 404 ? 1_555 O1D ? C HEM . ? A HEM 402 ? 1_555 85.2 ? 39 OD1 ? A ASP 180 ? A ASP 270 ? 1_555 ZN ? E ZN . ? A ZN 404 ? 1_555 O1D ? C HEM . ? A HEM 402 ? 1_555 78.7 ? 40 OD2 ? A ASP 180 ? A ASP 270 ? 1_555 ZN ? E ZN . ? A ZN 404 ? 1_555 O1D ? C HEM . ? A HEM 402 ? 1_555 42.6 ? 41 O1A ? B HEM . ? A HEM 401 ? 1_555 ZN ? E ZN . ? A ZN 404 ? 1_555 O1D ? C HEM . ? A HEM 402 ? 1_555 5.3 ? 42 OH ? A TYR 149 ? A TYR 239 ? 1_555 FE ? C HEM . ? A HEM 402 ? 1_555 NA ? C HEM . ? A HEM 402 ? 1_555 90.8 ? 43 OH ? A TYR 149 ? A TYR 239 ? 1_555 FE ? C HEM . ? A HEM 402 ? 1_555 NB ? C HEM . ? A HEM 402 ? 1_555 94.4 ? 44 NA ? C HEM . ? A HEM 402 ? 1_555 FE ? C HEM . ? A HEM 402 ? 1_555 NB ? C HEM . ? A HEM 402 ? 1_555 90.5 ? 45 OH ? A TYR 149 ? A TYR 239 ? 1_555 FE ? C HEM . ? A HEM 402 ? 1_555 NC ? C HEM . ? A HEM 402 ? 1_555 92.0 ? 46 NA ? C HEM . ? A HEM 402 ? 1_555 FE ? C HEM . ? A HEM 402 ? 1_555 NC ? C HEM . ? A HEM 402 ? 1_555 176.8 ? 47 NB ? C HEM . ? A HEM 402 ? 1_555 FE ? C HEM . ? A HEM 402 ? 1_555 NC ? C HEM . ? A HEM 402 ? 1_555 87.8 ? 48 OH ? A TYR 149 ? A TYR 239 ? 1_555 FE ? C HEM . ? A HEM 402 ? 1_555 ND ? C HEM . ? A HEM 402 ? 1_555 87.9 ? 49 NA ? C HEM . ? A HEM 402 ? 1_555 FE ? C HEM . ? A HEM 402 ? 1_555 ND ? C HEM . ? A HEM 402 ? 1_555 89.2 ? 50 NB ? C HEM . ? A HEM 402 ? 1_555 FE ? C HEM . ? A HEM 402 ? 1_555 ND ? C HEM . ? A HEM 402 ? 1_555 177.6 ? 51 NC ? C HEM . ? A HEM 402 ? 1_555 FE ? C HEM . ? A HEM 402 ? 1_555 ND ? C HEM . ? A HEM 402 ? 1_555 92.3 ? 52 OD1 ? A ASP 256 ? A ASP 346 ? 1_555 ZN ? G ZN . ? A ZN 406 ? 1_555 OD1 ? A ASP 256 ? A ASP 346 ? 1_555 0.0 ? 53 OD1 ? A ASP 256 ? A ASP 346 ? 1_555 ZN ? G ZN . ? A ZN 406 ? 1_555 O ? H HOH . ? A HOH 538 ? 1_555 95.6 ? 54 OD1 ? A ASP 256 ? A ASP 346 ? 1_555 ZN ? G ZN . ? A ZN 406 ? 1_555 O ? H HOH . ? A HOH 538 ? 1_555 95.6 ? 55 OD1 ? A ASP 256 ? A ASP 346 ? 1_555 ZN ? G ZN . ? A ZN 406 ? 1_555 O ? H HOH . ? A HOH 538 ? 4_555 113.9 ? 56 OD1 ? A ASP 256 ? A ASP 346 ? 1_555 ZN ? G ZN . ? A ZN 406 ? 1_555 O ? H HOH . ? A HOH 538 ? 4_555 113.9 ? 57 O ? H HOH . ? A HOH 538 ? 1_555 ZN ? G ZN . ? A ZN 406 ? 1_555 O ? H HOH . ? A HOH 538 ? 4_555 36.6 ? 58 OD1 ? A ASP 256 ? A ASP 346 ? 1_555 ZN ? G ZN . ? A ZN 406 ? 1_555 O ? H HOH . ? A HOH 541 ? 1_555 85.8 ? 59 OD1 ? A ASP 256 ? A ASP 346 ? 1_555 ZN ? G ZN . ? A ZN 406 ? 1_555 O ? H HOH . ? A HOH 541 ? 1_555 85.8 ? 60 O ? H HOH . ? A HOH 538 ? 1_555 ZN ? G ZN . ? A ZN 406 ? 1_555 O ? H HOH . ? A HOH 541 ? 1_555 118.8 ? 61 O ? H HOH . ? A HOH 538 ? 4_555 ZN ? G ZN . ? A ZN 406 ? 1_555 O ? H HOH . ? A HOH 541 ? 1_555 87.6 ? 62 OD1 ? A ASP 256 ? A ASP 346 ? 1_555 ZN ? G ZN . ? A ZN 406 ? 1_555 O ? H HOH . ? A HOH 541 ? 4_555 87.1 ? 63 OD1 ? A ASP 256 ? A ASP 346 ? 1_555 ZN ? G ZN . ? A ZN 406 ? 1_555 O ? H HOH . ? A HOH 541 ? 4_555 87.1 ? 64 O ? H HOH . ? A HOH 538 ? 1_555 ZN ? G ZN . ? A ZN 406 ? 1_555 O ? H HOH . ? A HOH 541 ? 4_555 87.6 ? 65 O ? H HOH . ? A HOH 538 ? 4_555 ZN ? G ZN . ? A ZN 406 ? 1_555 O ? H HOH . ? A HOH 541 ? 4_555 118.8 ? 66 O ? H HOH . ? A HOH 541 ? 1_555 ZN ? G ZN . ? A ZN 406 ? 1_555 O ? H HOH . ? A HOH 541 ? 4_555 153.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-06-28 2 'Structure model' 1 1 2017-10-11 3 'Structure model' 2 0 2017-11-15 4 'Structure model' 2 1 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Polymer sequence' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' entity_poly 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' database_2 8 4 'Structure model' pdbx_initial_refinement_model 9 4 'Structure model' pdbx_struct_conn_angle 10 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 3 'Structure model' '_citation.journal_volume' 11 3 'Structure model' '_citation.page_first' 12 3 'Structure model' '_citation.page_last' 13 3 'Structure model' '_citation.title' 14 3 'Structure model' '_entity_poly.pdbx_target_identifier' 15 4 'Structure model' '_database_2.pdbx_DOI' 16 4 'Structure model' '_database_2.pdbx_database_accession' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 27 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 28 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 29 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 30 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 31 4 'Structure model' '_pdbx_struct_conn_angle.value' 32 4 'Structure model' '_struct_conn.pdbx_dist_value' 33 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 34 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 35 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 36 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 37 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 38 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 39 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 40 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 41 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 42 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 43 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 44 4 'Structure model' '_struct_conn.ptnr2_symmetry' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.7.0029 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.20 3 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 NH1 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 ARG _pdbx_validate_symm_contact.auth_seq_id_1 207 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 OD2 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 ASP _pdbx_validate_symm_contact.auth_seq_id_2 306 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_555 _pdbx_validate_symm_contact.dist 2.15 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 275 ? ? 57.91 -141.99 2 1 GLN A 288 ? ? 32.68 62.64 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HEM CHA C N N 123 HEM CHB C N N 124 HEM CHC C N N 125 HEM CHD C N N 126 HEM C1A C Y N 127 HEM C2A C Y N 128 HEM C3A C Y N 129 HEM C4A C Y N 130 HEM CMA C N N 131 HEM CAA C N N 132 HEM CBA C N N 133 HEM CGA C N N 134 HEM O1A O N N 135 HEM O2A O N N 136 HEM C1B C N N 137 HEM C2B C N N 138 HEM C3B C N N 139 HEM C4B C N N 140 HEM CMB C N N 141 HEM CAB C N N 142 HEM CBB C N N 143 HEM C1C C Y N 144 HEM C2C C Y N 145 HEM C3C C Y N 146 HEM C4C C Y N 147 HEM CMC C N N 148 HEM CAC C N N 149 HEM CBC C N N 150 HEM C1D C N N 151 HEM C2D C N N 152 HEM C3D C N N 153 HEM C4D C N N 154 HEM CMD C N N 155 HEM CAD C N N 156 HEM CBD C N N 157 HEM CGD C N N 158 HEM O1D O N N 159 HEM O2D O N N 160 HEM NA N Y N 161 HEM NB N N N 162 HEM NC N Y N 163 HEM ND N N N 164 HEM FE FE N N 165 HEM HHB H N N 166 HEM HHC H N N 167 HEM HHD H N N 168 HEM HMA H N N 169 HEM HMAA H N N 170 HEM HMAB H N N 171 HEM HAA H N N 172 HEM HAAA H N N 173 HEM HBA H N N 174 HEM HBAA H N N 175 HEM HMB H N N 176 HEM HMBA H N N 177 HEM HMBB H N N 178 HEM HAB H N N 179 HEM HBB H N N 180 HEM HBBA H N N 181 HEM HMC H N N 182 HEM HMCA H N N 183 HEM HMCB H N N 184 HEM HAC H N N 185 HEM HBC H N N 186 HEM HBCA H N N 187 HEM HMD H N N 188 HEM HMDA H N N 189 HEM HMDB H N N 190 HEM HAD H N N 191 HEM HADA H N N 192 HEM HBD H N N 193 HEM HBDA H N N 194 HEM H2A H N N 195 HEM H2D H N N 196 HEM HHA H N N 197 HIS N N N N 198 HIS CA C N S 199 HIS C C N N 200 HIS O O N N 201 HIS CB C N N 202 HIS CG C Y N 203 HIS ND1 N Y N 204 HIS CD2 C Y N 205 HIS CE1 C Y N 206 HIS NE2 N Y N 207 HIS OXT O N N 208 HIS H H N N 209 HIS H2 H N N 210 HIS HA H N N 211 HIS HB2 H N N 212 HIS HB3 H N N 213 HIS HD1 H N N 214 HIS HD2 H N N 215 HIS HE1 H N N 216 HIS HE2 H N N 217 HIS HXT H N N 218 HOH O O N N 219 HOH H1 H N N 220 HOH H2 H N N 221 ILE N N N N 222 ILE CA C N S 223 ILE C C N N 224 ILE O O N N 225 ILE CB C N S 226 ILE CG1 C N N 227 ILE CG2 C N N 228 ILE CD1 C N N 229 ILE OXT O N N 230 ILE H H N N 231 ILE H2 H N N 232 ILE HA H N N 233 ILE HB H N N 234 ILE HG12 H N N 235 ILE HG13 H N N 236 ILE HG21 H N N 237 ILE HG22 H N N 238 ILE HG23 H N N 239 ILE HD11 H N N 240 ILE HD12 H N N 241 ILE HD13 H N N 242 ILE HXT H N N 243 LEU N N N N 244 LEU CA C N S 245 LEU C C N N 246 LEU O O N N 247 LEU CB C N N 248 LEU CG C N N 249 LEU CD1 C N N 250 LEU CD2 C N N 251 LEU OXT O N N 252 LEU H H N N 253 LEU H2 H N N 254 LEU HA H N N 255 LEU HB2 H N N 256 LEU HB3 H N N 257 LEU HG H N N 258 LEU HD11 H N N 259 LEU HD12 H N N 260 LEU HD13 H N N 261 LEU HD21 H N N 262 LEU HD22 H N N 263 LEU HD23 H N N 264 LEU HXT H N N 265 LYS N N N N 266 LYS CA C N S 267 LYS C C N N 268 LYS O O N N 269 LYS CB C N N 270 LYS CG C N N 271 LYS CD C N N 272 LYS CE C N N 273 LYS NZ N N N 274 LYS OXT O N N 275 LYS H H N N 276 LYS H2 H N N 277 LYS HA H N N 278 LYS HB2 H N N 279 LYS HB3 H N N 280 LYS HG2 H N N 281 LYS HG3 H N N 282 LYS HD2 H N N 283 LYS HD3 H N N 284 LYS HE2 H N N 285 LYS HE3 H N N 286 LYS HZ1 H N N 287 LYS HZ2 H N N 288 LYS HZ3 H N N 289 LYS HXT H N N 290 MET N N N N 291 MET CA C N S 292 MET C C N N 293 MET O O N N 294 MET CB C N N 295 MET CG C N N 296 MET SD S N N 297 MET CE C N N 298 MET OXT O N N 299 MET H H N N 300 MET H2 H N N 301 MET HA H N N 302 MET HB2 H N N 303 MET HB3 H N N 304 MET HG2 H N N 305 MET HG3 H N N 306 MET HE1 H N N 307 MET HE2 H N N 308 MET HE3 H N N 309 MET HXT H N N 310 PHE N N N N 311 PHE CA C N S 312 PHE C C N N 313 PHE O O N N 314 PHE CB C N N 315 PHE CG C Y N 316 PHE CD1 C Y N 317 PHE CD2 C Y N 318 PHE CE1 C Y N 319 PHE CE2 C Y N 320 PHE CZ C Y N 321 PHE OXT O N N 322 PHE H H N N 323 PHE H2 H N N 324 PHE HA H N N 325 PHE HB2 H N N 326 PHE HB3 H N N 327 PHE HD1 H N N 328 PHE HD2 H N N 329 PHE HE1 H N N 330 PHE HE2 H N N 331 PHE HZ H N N 332 PHE HXT H N N 333 PRO N N N N 334 PRO CA C N S 335 PRO C C N N 336 PRO O O N N 337 PRO CB C N N 338 PRO CG C N N 339 PRO CD C N N 340 PRO OXT O N N 341 PRO H H N N 342 PRO HA H N N 343 PRO HB2 H N N 344 PRO HB3 H N N 345 PRO HG2 H N N 346 PRO HG3 H N N 347 PRO HD2 H N N 348 PRO HD3 H N N 349 PRO HXT H N N 350 SER N N N N 351 SER CA C N S 352 SER C C N N 353 SER O O N N 354 SER CB C N N 355 SER OG O N N 356 SER OXT O N N 357 SER H H N N 358 SER H2 H N N 359 SER HA H N N 360 SER HB2 H N N 361 SER HB3 H N N 362 SER HG H N N 363 SER HXT H N N 364 THR N N N N 365 THR CA C N S 366 THR C C N N 367 THR O O N N 368 THR CB C N R 369 THR OG1 O N N 370 THR CG2 C N N 371 THR OXT O N N 372 THR H H N N 373 THR H2 H N N 374 THR HA H N N 375 THR HB H N N 376 THR HG1 H N N 377 THR HG21 H N N 378 THR HG22 H N N 379 THR HG23 H N N 380 THR HXT H N N 381 TYR N N N N 382 TYR CA C N S 383 TYR C C N N 384 TYR O O N N 385 TYR CB C N N 386 TYR CG C Y N 387 TYR CD1 C Y N 388 TYR CD2 C Y N 389 TYR CE1 C Y N 390 TYR CE2 C Y N 391 TYR CZ C Y N 392 TYR OH O N N 393 TYR OXT O N N 394 TYR H H N N 395 TYR H2 H N N 396 TYR HA H N N 397 TYR HB2 H N N 398 TYR HB3 H N N 399 TYR HD1 H N N 400 TYR HD2 H N N 401 TYR HE1 H N N 402 TYR HE2 H N N 403 TYR HH H N N 404 TYR HXT H N N 405 VAL N N N N 406 VAL CA C N S 407 VAL C C N N 408 VAL O O N N 409 VAL CB C N N 410 VAL CG1 C N N 411 VAL CG2 C N N 412 VAL OXT O N N 413 VAL H H N N 414 VAL H2 H N N 415 VAL HA H N N 416 VAL HB H N N 417 VAL HG11 H N N 418 VAL HG12 H N N 419 VAL HG13 H N N 420 VAL HG21 H N N 421 VAL HG22 H N N 422 VAL HG23 H N N 423 VAL HXT H N N 424 ZN ZN ZN N N 425 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HEM CHA C1A sing N N 116 HEM CHA C4D doub N N 117 HEM CHA HHA sing N N 118 HEM CHB C4A sing N N 119 HEM CHB C1B doub N N 120 HEM CHB HHB sing N N 121 HEM CHC C4B sing N N 122 HEM CHC C1C doub N N 123 HEM CHC HHC sing N N 124 HEM CHD C4C doub N N 125 HEM CHD C1D sing N N 126 HEM CHD HHD sing N N 127 HEM C1A C2A doub Y N 128 HEM C1A NA sing Y N 129 HEM C2A C3A sing Y N 130 HEM C2A CAA sing N N 131 HEM C3A C4A doub Y N 132 HEM C3A CMA sing N N 133 HEM C4A NA sing Y N 134 HEM CMA HMA sing N N 135 HEM CMA HMAA sing N N 136 HEM CMA HMAB sing N N 137 HEM CAA CBA sing N N 138 HEM CAA HAA sing N N 139 HEM CAA HAAA sing N N 140 HEM CBA CGA sing N N 141 HEM CBA HBA sing N N 142 HEM CBA HBAA sing N N 143 HEM CGA O1A doub N N 144 HEM CGA O2A sing N N 145 HEM C1B C2B sing N N 146 HEM C1B NB sing N N 147 HEM C2B C3B doub N N 148 HEM C2B CMB sing N N 149 HEM C3B C4B sing N N 150 HEM C3B CAB sing N N 151 HEM C4B NB doub N N 152 HEM CMB HMB sing N N 153 HEM CMB HMBA sing N N 154 HEM CMB HMBB sing N N 155 HEM CAB CBB doub N N 156 HEM CAB HAB sing N N 157 HEM CBB HBB sing N N 158 HEM CBB HBBA sing N N 159 HEM C1C C2C sing Y N 160 HEM C1C NC sing Y N 161 HEM C2C C3C doub Y N 162 HEM C2C CMC sing N N 163 HEM C3C C4C sing Y N 164 HEM C3C CAC sing N N 165 HEM C4C NC sing Y N 166 HEM CMC HMC sing N N 167 HEM CMC HMCA sing N N 168 HEM CMC HMCB sing N N 169 HEM CAC CBC doub N N 170 HEM CAC HAC sing N N 171 HEM CBC HBC sing N N 172 HEM CBC HBCA sing N N 173 HEM C1D C2D sing N N 174 HEM C1D ND doub N N 175 HEM C2D C3D doub N N 176 HEM C2D CMD sing N N 177 HEM C3D C4D sing N N 178 HEM C3D CAD sing N N 179 HEM C4D ND sing N N 180 HEM CMD HMD sing N N 181 HEM CMD HMDA sing N N 182 HEM CMD HMDB sing N N 183 HEM CAD CBD sing N N 184 HEM CAD HAD sing N N 185 HEM CAD HADA sing N N 186 HEM CBD CGD sing N N 187 HEM CBD HBD sing N N 188 HEM CBD HBDA sing N N 189 HEM CGD O1D doub N N 190 HEM CGD O2D sing N N 191 HEM O2A H2A sing N N 192 HEM O2D H2D sing N N 193 HEM FE NA sing N N 194 HEM FE NB sing N N 195 HEM FE NC sing N N 196 HEM FE ND sing N N 197 HIS N CA sing N N 198 HIS N H sing N N 199 HIS N H2 sing N N 200 HIS CA C sing N N 201 HIS CA CB sing N N 202 HIS CA HA sing N N 203 HIS C O doub N N 204 HIS C OXT sing N N 205 HIS CB CG sing N N 206 HIS CB HB2 sing N N 207 HIS CB HB3 sing N N 208 HIS CG ND1 sing Y N 209 HIS CG CD2 doub Y N 210 HIS ND1 CE1 doub Y N 211 HIS ND1 HD1 sing N N 212 HIS CD2 NE2 sing Y N 213 HIS CD2 HD2 sing N N 214 HIS CE1 NE2 sing Y N 215 HIS CE1 HE1 sing N N 216 HIS NE2 HE2 sing N N 217 HIS OXT HXT sing N N 218 HOH O H1 sing N N 219 HOH O H2 sing N N 220 ILE N CA sing N N 221 ILE N H sing N N 222 ILE N H2 sing N N 223 ILE CA C sing N N 224 ILE CA CB sing N N 225 ILE CA HA sing N N 226 ILE C O doub N N 227 ILE C OXT sing N N 228 ILE CB CG1 sing N N 229 ILE CB CG2 sing N N 230 ILE CB HB sing N N 231 ILE CG1 CD1 sing N N 232 ILE CG1 HG12 sing N N 233 ILE CG1 HG13 sing N N 234 ILE CG2 HG21 sing N N 235 ILE CG2 HG22 sing N N 236 ILE CG2 HG23 sing N N 237 ILE CD1 HD11 sing N N 238 ILE CD1 HD12 sing N N 239 ILE CD1 HD13 sing N N 240 ILE OXT HXT sing N N 241 LEU N CA sing N N 242 LEU N H sing N N 243 LEU N H2 sing N N 244 LEU CA C sing N N 245 LEU CA CB sing N N 246 LEU CA HA sing N N 247 LEU C O doub N N 248 LEU C OXT sing N N 249 LEU CB CG sing N N 250 LEU CB HB2 sing N N 251 LEU CB HB3 sing N N 252 LEU CG CD1 sing N N 253 LEU CG CD2 sing N N 254 LEU CG HG sing N N 255 LEU CD1 HD11 sing N N 256 LEU CD1 HD12 sing N N 257 LEU CD1 HD13 sing N N 258 LEU CD2 HD21 sing N N 259 LEU CD2 HD22 sing N N 260 LEU CD2 HD23 sing N N 261 LEU OXT HXT sing N N 262 LYS N CA sing N N 263 LYS N H sing N N 264 LYS N H2 sing N N 265 LYS CA C sing N N 266 LYS CA CB sing N N 267 LYS CA HA sing N N 268 LYS C O doub N N 269 LYS C OXT sing N N 270 LYS CB CG sing N N 271 LYS CB HB2 sing N N 272 LYS CB HB3 sing N N 273 LYS CG CD sing N N 274 LYS CG HG2 sing N N 275 LYS CG HG3 sing N N 276 LYS CD CE sing N N 277 LYS CD HD2 sing N N 278 LYS CD HD3 sing N N 279 LYS CE NZ sing N N 280 LYS CE HE2 sing N N 281 LYS CE HE3 sing N N 282 LYS NZ HZ1 sing N N 283 LYS NZ HZ2 sing N N 284 LYS NZ HZ3 sing N N 285 LYS OXT HXT sing N N 286 MET N CA sing N N 287 MET N H sing N N 288 MET N H2 sing N N 289 MET CA C sing N N 290 MET CA CB sing N N 291 MET CA HA sing N N 292 MET C O doub N N 293 MET C OXT sing N N 294 MET CB CG sing N N 295 MET CB HB2 sing N N 296 MET CB HB3 sing N N 297 MET CG SD sing N N 298 MET CG HG2 sing N N 299 MET CG HG3 sing N N 300 MET SD CE sing N N 301 MET CE HE1 sing N N 302 MET CE HE2 sing N N 303 MET CE HE3 sing N N 304 MET OXT HXT sing N N 305 PHE N CA sing N N 306 PHE N H sing N N 307 PHE N H2 sing N N 308 PHE CA C sing N N 309 PHE CA CB sing N N 310 PHE CA HA sing N N 311 PHE C O doub N N 312 PHE C OXT sing N N 313 PHE CB CG sing N N 314 PHE CB HB2 sing N N 315 PHE CB HB3 sing N N 316 PHE CG CD1 doub Y N 317 PHE CG CD2 sing Y N 318 PHE CD1 CE1 sing Y N 319 PHE CD1 HD1 sing N N 320 PHE CD2 CE2 doub Y N 321 PHE CD2 HD2 sing N N 322 PHE CE1 CZ doub Y N 323 PHE CE1 HE1 sing N N 324 PHE CE2 CZ sing Y N 325 PHE CE2 HE2 sing N N 326 PHE CZ HZ sing N N 327 PHE OXT HXT sing N N 328 PRO N CA sing N N 329 PRO N CD sing N N 330 PRO N H sing N N 331 PRO CA C sing N N 332 PRO CA CB sing N N 333 PRO CA HA sing N N 334 PRO C O doub N N 335 PRO C OXT sing N N 336 PRO CB CG sing N N 337 PRO CB HB2 sing N N 338 PRO CB HB3 sing N N 339 PRO CG CD sing N N 340 PRO CG HG2 sing N N 341 PRO CG HG3 sing N N 342 PRO CD HD2 sing N N 343 PRO CD HD3 sing N N 344 PRO OXT HXT sing N N 345 SER N CA sing N N 346 SER N H sing N N 347 SER N H2 sing N N 348 SER CA C sing N N 349 SER CA CB sing N N 350 SER CA HA sing N N 351 SER C O doub N N 352 SER C OXT sing N N 353 SER CB OG sing N N 354 SER CB HB2 sing N N 355 SER CB HB3 sing N N 356 SER OG HG sing N N 357 SER OXT HXT sing N N 358 THR N CA sing N N 359 THR N H sing N N 360 THR N H2 sing N N 361 THR CA C sing N N 362 THR CA CB sing N N 363 THR CA HA sing N N 364 THR C O doub N N 365 THR C OXT sing N N 366 THR CB OG1 sing N N 367 THR CB CG2 sing N N 368 THR CB HB sing N N 369 THR OG1 HG1 sing N N 370 THR CG2 HG21 sing N N 371 THR CG2 HG22 sing N N 372 THR CG2 HG23 sing N N 373 THR OXT HXT sing N N 374 TYR N CA sing N N 375 TYR N H sing N N 376 TYR N H2 sing N N 377 TYR CA C sing N N 378 TYR CA CB sing N N 379 TYR CA HA sing N N 380 TYR C O doub N N 381 TYR C OXT sing N N 382 TYR CB CG sing N N 383 TYR CB HB2 sing N N 384 TYR CB HB3 sing N N 385 TYR CG CD1 doub Y N 386 TYR CG CD2 sing Y N 387 TYR CD1 CE1 sing Y N 388 TYR CD1 HD1 sing N N 389 TYR CD2 CE2 doub Y N 390 TYR CD2 HD2 sing N N 391 TYR CE1 CZ doub Y N 392 TYR CE1 HE1 sing N N 393 TYR CE2 CZ sing Y N 394 TYR CE2 HE2 sing N N 395 TYR CZ OH sing N N 396 TYR OH HH sing N N 397 TYR OXT HXT sing N N 398 VAL N CA sing N N 399 VAL N H sing N N 400 VAL N H2 sing N N 401 VAL CA C sing N N 402 VAL CA CB sing N N 403 VAL CA HA sing N N 404 VAL C O doub N N 405 VAL C OXT sing N N 406 VAL CB CG1 sing N N 407 VAL CB CG2 sing N N 408 VAL CB HB sing N N 409 VAL CG1 HG11 sing N N 410 VAL CG1 HG12 sing N N 411 VAL CG1 HG13 sing N N 412 VAL CG2 HG21 sing N N 413 VAL CG2 HG22 sing N N 414 VAL CG2 HG23 sing N N 415 VAL OXT HXT sing N N 416 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal JSPS Japan JP24770110 1 JSPS Japan JP15H01655 2 JSPS Japan JP25121739 3 JSPS Japan JP23121531 4 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PROTOPORPHYRIN IX CONTAINING FE' HEM 3 'ZINC ION' ZN 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3MD9 _pdbx_initial_refinement_model.details ? #