data_5H2S # _entry.id 5H2S # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5H2S pdb_00005h2s 10.2210/pdb5h2s/pdb WWPDB D_1300001691 ? ? BMRB 36025 ? 10.13018/BMR36025 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-10-25 2 'Structure model' 1 1 2023-06-14 3 'Structure model' 1 2 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' Other 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' database_2 2 2 'Structure model' pdbx_database_status 3 2 'Structure model' pdbx_nmr_software 4 2 'Structure model' pdbx_nmr_spectrometer 5 3 'Structure model' chem_comp_atom 6 3 'Structure model' chem_comp_bond 7 3 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 2 'Structure model' '_pdbx_nmr_software.name' 5 2 'Structure model' '_pdbx_nmr_spectrometer.model' 6 3 'Structure model' '_database_2.pdbx_DOI' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5H2S _pdbx_database_status.recvd_initial_deposition_date 2016-10-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution structure of Tilapia Piscidin 4 (TP4) from Oreochromis niloticus' _pdbx_database_related.db_id 36025 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wei, S.' 1 'Chen, C.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Solution structure of Tilapia piscidin 4, an antimicrobial peptide effective against multidrug resistant Helicobacter pylori' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wei, S.' 1 ? primary 'Liao, Y.' 2 ? primary 'Chen, C.' 3 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description Piscidin-4 _entity.formula_weight 2991.639 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'UNP residues 23-47' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code FIHHIIGGLFSAGKAIHRLIRRRRR _entity_poly.pdbx_seq_one_letter_code_can FIHHIIGGLFSAGKAIHRLIRRRRR _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PHE n 1 2 ILE n 1 3 HIS n 1 4 HIS n 1 5 ILE n 1 6 ILE n 1 7 GLY n 1 8 GLY n 1 9 LEU n 1 10 PHE n 1 11 SER n 1 12 ALA n 1 13 GLY n 1 14 LYS n 1 15 ALA n 1 16 ILE n 1 17 HIS n 1 18 ARG n 1 19 LEU n 1 20 ILE n 1 21 ARG n 1 22 ARG n 1 23 ARG n 1 24 ARG n 1 25 ARG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 25 _pdbx_entity_src_syn.organism_scientific 'Oreochromis niloticus' _pdbx_entity_src_syn.organism_common_name 'Nile tilapia' _pdbx_entity_src_syn.ncbi_taxonomy_id 8128 _pdbx_entity_src_syn.details 'Oreochromis niloticus spleen tissues, GR634176.1' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PHE 1 1 1 PHE PHE A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 HIS 3 3 3 HIS HIS A . n A 1 4 HIS 4 4 4 HIS HIS A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 ILE 16 16 16 ILE ILE A . n A 1 17 HIS 17 17 17 HIS HIS A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 ARG 22 22 22 ARG ARG A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 ARG 25 25 25 ARG ARG A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5H2S _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5H2S _struct.title 'Solution structure of Tilapia Piscidin 4 (TP4) from Oreochromis niloticus' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5H2S _struct_keywords.text 'antimicrobial peptide, piscidin, tilapia piscidin 4, DPC micelle, ANTIMICROBIAL PROTEIN' _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code L0CKG3_ORENI _struct_ref.pdbx_db_accession L0CKG3 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code FIHHIIGGLFSAGKAIHRLIRRRRR _struct_ref.pdbx_align_begin 23 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5H2S _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 25 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession L0CKG3 _struct_ref_seq.db_align_beg 23 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 47 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 25 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 2910 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id ILE _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 5 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ARG _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 23 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ILE _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 5 _struct_conf.end_auth_comp_id ARG _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 23 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 4 HE2 A HIS 17 ? ? HH21 A ARG 21 ? ? 1.31 2 7 HE2 A HIS 17 ? ? HH21 A ARG 21 ? ? 1.28 3 12 HE2 A HIS 17 ? ? HH21 A ARG 21 ? ? 1.25 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 2 ? ? -97.12 -93.19 2 1 HIS A 3 ? ? -157.01 -13.80 3 1 ARG A 23 ? ? -98.55 31.54 4 1 ARG A 24 ? ? -58.24 81.14 5 2 ILE A 2 ? ? -79.81 -98.31 6 2 HIS A 3 ? ? -157.29 -14.21 7 2 ARG A 24 ? ? -58.40 86.62 8 3 ILE A 2 ? ? -75.13 -102.44 9 3 HIS A 3 ? ? -155.27 -12.50 10 3 LEU A 9 ? ? -133.75 -34.56 11 3 ARG A 23 ? ? -99.51 34.75 12 3 ARG A 24 ? ? -58.30 82.80 13 4 ILE A 2 ? ? -89.14 -97.47 14 4 HIS A 3 ? ? -154.67 -14.37 15 4 ILE A 6 ? ? -91.33 -64.25 16 4 ARG A 24 ? ? -59.58 82.11 17 5 ILE A 2 ? ? -76.12 -97.95 18 5 HIS A 3 ? ? -157.97 -13.92 19 5 LEU A 9 ? ? -131.15 -32.76 20 5 ARG A 24 ? ? -58.51 82.68 21 6 ILE A 2 ? ? -77.65 -102.67 22 6 HIS A 3 ? ? -153.09 -14.07 23 6 LEU A 9 ? ? -131.16 -36.55 24 6 ARG A 24 ? ? -58.23 83.07 25 7 ILE A 2 ? ? -82.86 -98.64 26 7 HIS A 3 ? ? -157.51 -13.86 27 7 ARG A 24 ? ? -58.38 84.40 28 8 ILE A 2 ? ? -93.10 -86.35 29 8 HIS A 3 ? ? -157.35 -13.35 30 8 LEU A 9 ? ? -130.67 -33.08 31 8 ARG A 24 ? ? -59.40 84.65 32 9 ILE A 2 ? ? -76.33 -101.43 33 9 HIS A 3 ? ? -154.69 -13.68 34 9 LEU A 9 ? ? -131.09 -34.47 35 9 ARG A 24 ? ? -58.55 84.06 36 10 ILE A 2 ? ? -77.11 -105.64 37 10 HIS A 3 ? ? -153.80 -12.80 38 10 LEU A 9 ? ? -130.69 -34.29 39 10 ARG A 24 ? ? -58.78 80.86 40 11 ILE A 2 ? ? -78.36 -104.78 41 11 HIS A 3 ? ? -152.24 -12.26 42 11 LEU A 9 ? ? -137.25 -30.70 43 11 ARG A 24 ? ? -59.55 84.69 44 12 ILE A 2 ? ? -82.18 -103.02 45 12 HIS A 3 ? ? -152.08 -12.75 46 12 LEU A 9 ? ? -132.81 -31.37 47 12 ARG A 24 ? ? -58.67 80.99 48 13 ILE A 2 ? ? -81.73 -98.86 49 13 HIS A 3 ? ? -157.72 -15.78 50 13 ARG A 24 ? ? -59.23 84.15 51 14 ILE A 2 ? ? -90.45 -82.26 52 14 HIS A 3 ? ? -157.78 -13.40 53 14 ARG A 24 ? ? -56.72 87.91 54 15 ILE A 2 ? ? -91.37 -98.84 55 15 HIS A 3 ? ? -157.10 -15.64 56 15 ARG A 24 ? ? -58.24 83.84 # _pdbx_nmr_ensemble.entry_id 5H2S _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' # _pdbx_nmr_representative.entry_id 5H2S _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '1.5 mM TP4, 20 mM sodium phosphate, 100 mM U-98% 2H dodecylphosphocholine, 90% H2O/10% D2O' '90% H2O/10% D2O' TP4 micelle '1.5 mM TP4 with 100 mM dodecylphosphocholine-d38 in 20 mM sodium phosphate buffer at pH 3.5' 2 '1.5 mM TP4, 20 mM sodium phosphate, 100 mM U-98% 2H dodecylphosphocholine, 100% D2O' '100% D2O' TP4 micelle '1.5 mM TP4 with 100 mM dodecylphosphocholine-d38 in 20 mM sodium phosphate buffer at pH 3.5' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 TP4 1.5 ? mM 'natural abundance' 1 'sodium phosphate' 20 ? mM 'natural abundance' 1 dodecylphosphocholine 100 ? mM 'U-98% 2H' 2 TP4 1.5 ? mM 'natural abundance' 2 'sodium phosphate' 20 ? mM 'natural abundance' 2 dodecylphosphocholine 100 ? mM 'U-98% 2H' # _pdbx_nmr_exptl_sample_conditions.conditions_id 2 _pdbx_nmr_exptl_sample_conditions.temperature 318 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure ATMOSPHERIC _pdbx_nmr_exptl_sample_conditions.pH 3.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 105 _pdbx_nmr_exptl_sample_conditions.details '1.5 mM TP4 with 100 mM dodecylphosphocholine-d38 in 20 mM sodium phosphate buffer at pH 3.5' _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label 'phosphate buffer' _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 2 1 '2D 1H-1H TOCSY' 1 isotropic 2 2 1 '2D 1H-1H COSY' 1 isotropic 3 2 1 '2D 1H-1H NOESY' 1 isotropic 4 2 1 '2D DQF-COSY' 1 isotropic 5 2 2 '2D 1H-1H NOESY' 1 isotropic 6 2 2 '2D 1H-1H TOCSY' 1 isotropic # _pdbx_nmr_refine.entry_id 5H2S _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 4 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'chemical shift assignment' 'Bruker TopSpin' 3.1 Bruker 2 'data analysis' Sparky ? Goddard 3 'structure calculation' 'X-PLOR NIH' ? 'Schwieters, Kuszewski, Tjandra and Clore' 4 refinement 'X-PLOR NIH' ? 'Schwieters, Kuszewski, Tjandra and Clore' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 GLY N N N N 41 GLY CA C N N 42 GLY C C N N 43 GLY O O N N 44 GLY OXT O N N 45 GLY H H N N 46 GLY H2 H N N 47 GLY HA2 H N N 48 GLY HA3 H N N 49 GLY HXT H N N 50 HIS N N N N 51 HIS CA C N S 52 HIS C C N N 53 HIS O O N N 54 HIS CB C N N 55 HIS CG C Y N 56 HIS ND1 N Y N 57 HIS CD2 C Y N 58 HIS CE1 C Y N 59 HIS NE2 N Y N 60 HIS OXT O N N 61 HIS H H N N 62 HIS H2 H N N 63 HIS HA H N N 64 HIS HB2 H N N 65 HIS HB3 H N N 66 HIS HD1 H N N 67 HIS HD2 H N N 68 HIS HE1 H N N 69 HIS HE2 H N N 70 HIS HXT H N N 71 ILE N N N N 72 ILE CA C N S 73 ILE C C N N 74 ILE O O N N 75 ILE CB C N S 76 ILE CG1 C N N 77 ILE CG2 C N N 78 ILE CD1 C N N 79 ILE OXT O N N 80 ILE H H N N 81 ILE H2 H N N 82 ILE HA H N N 83 ILE HB H N N 84 ILE HG12 H N N 85 ILE HG13 H N N 86 ILE HG21 H N N 87 ILE HG22 H N N 88 ILE HG23 H N N 89 ILE HD11 H N N 90 ILE HD12 H N N 91 ILE HD13 H N N 92 ILE HXT H N N 93 LEU N N N N 94 LEU CA C N S 95 LEU C C N N 96 LEU O O N N 97 LEU CB C N N 98 LEU CG C N N 99 LEU CD1 C N N 100 LEU CD2 C N N 101 LEU OXT O N N 102 LEU H H N N 103 LEU H2 H N N 104 LEU HA H N N 105 LEU HB2 H N N 106 LEU HB3 H N N 107 LEU HG H N N 108 LEU HD11 H N N 109 LEU HD12 H N N 110 LEU HD13 H N N 111 LEU HD21 H N N 112 LEU HD22 H N N 113 LEU HD23 H N N 114 LEU HXT H N N 115 LYS N N N N 116 LYS CA C N S 117 LYS C C N N 118 LYS O O N N 119 LYS CB C N N 120 LYS CG C N N 121 LYS CD C N N 122 LYS CE C N N 123 LYS NZ N N N 124 LYS OXT O N N 125 LYS H H N N 126 LYS H2 H N N 127 LYS HA H N N 128 LYS HB2 H N N 129 LYS HB3 H N N 130 LYS HG2 H N N 131 LYS HG3 H N N 132 LYS HD2 H N N 133 LYS HD3 H N N 134 LYS HE2 H N N 135 LYS HE3 H N N 136 LYS HZ1 H N N 137 LYS HZ2 H N N 138 LYS HZ3 H N N 139 LYS HXT H N N 140 PHE N N N N 141 PHE CA C N S 142 PHE C C N N 143 PHE O O N N 144 PHE CB C N N 145 PHE CG C Y N 146 PHE CD1 C Y N 147 PHE CD2 C Y N 148 PHE CE1 C Y N 149 PHE CE2 C Y N 150 PHE CZ C Y N 151 PHE OXT O N N 152 PHE H H N N 153 PHE H2 H N N 154 PHE HA H N N 155 PHE HB2 H N N 156 PHE HB3 H N N 157 PHE HD1 H N N 158 PHE HD2 H N N 159 PHE HE1 H N N 160 PHE HE2 H N N 161 PHE HZ H N N 162 PHE HXT H N N 163 SER N N N N 164 SER CA C N S 165 SER C C N N 166 SER O O N N 167 SER CB C N N 168 SER OG O N N 169 SER OXT O N N 170 SER H H N N 171 SER H2 H N N 172 SER HA H N N 173 SER HB2 H N N 174 SER HB3 H N N 175 SER HG H N N 176 SER HXT H N N 177 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 GLY N CA sing N N 39 GLY N H sing N N 40 GLY N H2 sing N N 41 GLY CA C sing N N 42 GLY CA HA2 sing N N 43 GLY CA HA3 sing N N 44 GLY C O doub N N 45 GLY C OXT sing N N 46 GLY OXT HXT sing N N 47 HIS N CA sing N N 48 HIS N H sing N N 49 HIS N H2 sing N N 50 HIS CA C sing N N 51 HIS CA CB sing N N 52 HIS CA HA sing N N 53 HIS C O doub N N 54 HIS C OXT sing N N 55 HIS CB CG sing N N 56 HIS CB HB2 sing N N 57 HIS CB HB3 sing N N 58 HIS CG ND1 sing Y N 59 HIS CG CD2 doub Y N 60 HIS ND1 CE1 doub Y N 61 HIS ND1 HD1 sing N N 62 HIS CD2 NE2 sing Y N 63 HIS CD2 HD2 sing N N 64 HIS CE1 NE2 sing Y N 65 HIS CE1 HE1 sing N N 66 HIS NE2 HE2 sing N N 67 HIS OXT HXT sing N N 68 ILE N CA sing N N 69 ILE N H sing N N 70 ILE N H2 sing N N 71 ILE CA C sing N N 72 ILE CA CB sing N N 73 ILE CA HA sing N N 74 ILE C O doub N N 75 ILE C OXT sing N N 76 ILE CB CG1 sing N N 77 ILE CB CG2 sing N N 78 ILE CB HB sing N N 79 ILE CG1 CD1 sing N N 80 ILE CG1 HG12 sing N N 81 ILE CG1 HG13 sing N N 82 ILE CG2 HG21 sing N N 83 ILE CG2 HG22 sing N N 84 ILE CG2 HG23 sing N N 85 ILE CD1 HD11 sing N N 86 ILE CD1 HD12 sing N N 87 ILE CD1 HD13 sing N N 88 ILE OXT HXT sing N N 89 LEU N CA sing N N 90 LEU N H sing N N 91 LEU N H2 sing N N 92 LEU CA C sing N N 93 LEU CA CB sing N N 94 LEU CA HA sing N N 95 LEU C O doub N N 96 LEU C OXT sing N N 97 LEU CB CG sing N N 98 LEU CB HB2 sing N N 99 LEU CB HB3 sing N N 100 LEU CG CD1 sing N N 101 LEU CG CD2 sing N N 102 LEU CG HG sing N N 103 LEU CD1 HD11 sing N N 104 LEU CD1 HD12 sing N N 105 LEU CD1 HD13 sing N N 106 LEU CD2 HD21 sing N N 107 LEU CD2 HD22 sing N N 108 LEU CD2 HD23 sing N N 109 LEU OXT HXT sing N N 110 LYS N CA sing N N 111 LYS N H sing N N 112 LYS N H2 sing N N 113 LYS CA C sing N N 114 LYS CA CB sing N N 115 LYS CA HA sing N N 116 LYS C O doub N N 117 LYS C OXT sing N N 118 LYS CB CG sing N N 119 LYS CB HB2 sing N N 120 LYS CB HB3 sing N N 121 LYS CG CD sing N N 122 LYS CG HG2 sing N N 123 LYS CG HG3 sing N N 124 LYS CD CE sing N N 125 LYS CD HD2 sing N N 126 LYS CD HD3 sing N N 127 LYS CE NZ sing N N 128 LYS CE HE2 sing N N 129 LYS CE HE3 sing N N 130 LYS NZ HZ1 sing N N 131 LYS NZ HZ2 sing N N 132 LYS NZ HZ3 sing N N 133 LYS OXT HXT sing N N 134 PHE N CA sing N N 135 PHE N H sing N N 136 PHE N H2 sing N N 137 PHE CA C sing N N 138 PHE CA CB sing N N 139 PHE CA HA sing N N 140 PHE C O doub N N 141 PHE C OXT sing N N 142 PHE CB CG sing N N 143 PHE CB HB2 sing N N 144 PHE CB HB3 sing N N 145 PHE CG CD1 doub Y N 146 PHE CG CD2 sing Y N 147 PHE CD1 CE1 sing Y N 148 PHE CD1 HD1 sing N N 149 PHE CD2 CE2 doub Y N 150 PHE CD2 HD2 sing N N 151 PHE CE1 CZ doub Y N 152 PHE CE1 HE1 sing N N 153 PHE CE2 CZ sing Y N 154 PHE CE2 HE2 sing N N 155 PHE CZ HZ sing N N 156 PHE OXT HXT sing N N 157 SER N CA sing N N 158 SER N H sing N N 159 SER N H2 sing N N 160 SER CA C sing N N 161 SER CA CB sing N N 162 SER CA HA sing N N 163 SER C O doub N N 164 SER C OXT sing N N 165 SER CB OG sing N N 166 SER CB HB2 sing N N 167 SER CB HB3 sing N N 168 SER OG HG sing N N 169 SER OXT HXT sing N N 170 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Academia Sinica and Ministry of Science and Technology' Taiwan 104-0210-01-09-02 1 'Ministry of Science and Technology' Taiwan 'MOST 103-2311-B-001-026-MY3' 2 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details 'with a triple (1H, 13C and 15N) resonance cryoprobe' # _atom_sites.entry_id 5H2S _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_