data_5I1R # _entry.id 5I1R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5I1R pdb_00005i1r 10.2210/pdb5i1r/pdb WWPDB D_1000218105 ? ? BMRB 30008 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.db_id 30008 _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5I1R _pdbx_database_status.recvd_initial_deposition_date 2016-02-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Deshmukh, L.' 1 ? 'Schwieters, C.D.' 2 ? 'Grishaev, A.' 3 ? 'Clore, G.M.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Chemphyschem _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1439-7641 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 17 _citation.language ? _citation.page_first 1548 _citation.page_last 1552 _citation.title ;Quantitative Characterization of Configurational Space Sampled by HIV-1 Nucleocapsid Using Solution NMR, X-ray Scattering and Protein Engineering. ; _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/cphc.201600212 _citation.pdbx_database_id_PubMed 26946052 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Deshmukh, L.' 1 ? primary 'Schwieters, C.D.' 2 ? primary 'Grishaev, A.' 3 ? primary 'Clore, G.M.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nucleocapsid protein p7' 6442.522 1 ? ? ? 'zinc atoms' 2 non-polymer man 'ZINC ION' 65.409 2 ? ? ? 'zinc atoms' # _entity_name_com.entity_id 1 _entity_name_com.name Pr55Gag # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MQRGNFRNQRKIVKCFNCGKEGHTARNCRAPRKKGCWKCGKEGHQMKDCTERQAN _entity_poly.pdbx_seq_one_letter_code_can MQRGNFRNQRKIVKCFNCGKEGHTARNCRAPRKKGCWKCGKEGHQMKDCTERQAN _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLN n 1 3 ARG n 1 4 GLY n 1 5 ASN n 1 6 PHE n 1 7 ARG n 1 8 ASN n 1 9 GLN n 1 10 ARG n 1 11 LYS n 1 12 ILE n 1 13 VAL n 1 14 LYS n 1 15 CYS n 1 16 PHE n 1 17 ASN n 1 18 CYS n 1 19 GLY n 1 20 LYS n 1 21 GLU n 1 22 GLY n 1 23 HIS n 1 24 THR n 1 25 ALA n 1 26 ARG n 1 27 ASN n 1 28 CYS n 1 29 ARG n 1 30 ALA n 1 31 PRO n 1 32 ARG n 1 33 LYS n 1 34 LYS n 1 35 GLY n 1 36 CYS n 1 37 TRP n 1 38 LYS n 1 39 CYS n 1 40 GLY n 1 41 LYS n 1 42 GLU n 1 43 GLY n 1 44 HIS n 1 45 GLN n 1 46 MET n 1 47 LYS n 1 48 ASP n 1 49 CYS n 1 50 THR n 1 51 GLU n 1 52 ARG n 1 53 GLN n 1 54 ALA n 1 55 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 55 _entity_src_gen.gene_src_common_name HIV-1 _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene gag _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'isolate HXB2' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus type 1 (HXB2 ISOLATE)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11706 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET11a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GAG_HV1H2 _struct_ref.pdbx_db_accession P04591 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MQRGNFRNQRKIVKCFNCGKEGHTARNCRAPRKKGCWKCGKEGHQMKDCTERQAN _struct_ref.pdbx_align_begin 378 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5I1R _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 55 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P04591 _struct_ref_seq.db_align_beg 378 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 432 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 378 _struct_ref_seq.pdbx_auth_seq_align_end 432 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-15N HSQC' 1 isotropic 2 1 1 '3D HNCO' 1 isotropic 3 1 1 '3D HNCA' 1 isotropic 4 1 1 '3D HNCACB' 1 isotropic 5 1 2 '2D ARTSY' 2 anisotropic 6 1 2 ;3D Quntitaive HNCO - NC' ; 1 anisotropic 7 1 2 ;3D Quntitaive HNCO - CaC' ; 1 anisotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 308 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 50 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label Buffer_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 ;0.2 mM [U-13C; U-15N; U-2H] Nucleocapsid protein of human immunodeficiency virus 1 (HIV-1), 50 mM sodium chloride, 20 mM sodium phosphate, 1 mM Dithiothreitol, 0.1 mM zinc chloride, 93% H2O/7% D2O ; '93% H2O/7% D2O' CDN_Sample solution ? 2 ;0.2 mM [U-13C; U-15N; U-2H] Nucleocapsid protein of human immunodeficiency virus 1 (HIV-1), 50 mM sodium chloride, 20 mM sodium phosphate, 1 mM Dithiothreitol, 0.1 mM zinc chloride, 5 % neutral bicelles, 93% H2O/7% D2O ; '93% H2O/7% D2O' CDN_Sample_1 bicelle ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 AVANCE ? Bruker 500 ? 2 AVANCE ? Bruker 800 ? # _pdbx_nmr_refine.entry_id 5I1R _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 5I1R _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 21 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5I1R _pdbx_nmr_representative.conformer_id all _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement Xplor-NIH 2.41 'C. D. Schwieters, J. J. Kuszewski, N. Tjandra, G. M. Clore' 2 'chemical shift assignment' Analysis 2.2.2 'W. F. Vranken, W. Boucher, T. J. Stevens, R. H. Fogh, A. Pajon, M. Llinas, E. L. Ulrich, J. L. Markley, J. Ionides, E. D. Laue' 3 'peak picking' Analysis 2.2.2 'W. F. Vranken, W. Boucher, T. J. Stevens, R. H. Fogh, A. Pajon, M. Llinas, E. L. Ulrich, J. L. Markley, J. Ionides, E. D. Laue' # loop_ _exptl.absorpt_coefficient_mu _exptl.absorpt_correction_T_max _exptl.absorpt_correction_T_min _exptl.absorpt_correction_type _exptl.absorpt_process_details _exptl.entry_id _exptl.crystals_number _exptl.details _exptl.method _exptl.method_details ? ? ? ? ? 5I1R ? ? 'SOLUTION NMR' ? ? ? ? ? ? 5I1R ? ? 'SOLUTION SCATTERING' ? # _struct.entry_id 5I1R _struct.title 'Quantitative characterization of configurational space sampled by HIV-1 nucleocapsid using solution NMR and X-ray scattering' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5I1R _struct_keywords.text 'VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 15 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 392 A ZN 901 1_555 ? ? ? ? ? ? ? 2.382 ? ? metalc2 metalc ? ? A CYS 18 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 395 A ZN 901 1_555 ? ? ? ? ? ? ? 2.386 ? ? metalc3 metalc ? ? A HIS 23 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 400 A ZN 901 1_555 ? ? ? ? ? ? ? 2.269 ? ? metalc4 metalc ? ? A CYS 28 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 405 A ZN 901 1_555 ? ? ? ? ? ? ? 2.395 ? ? metalc5 metalc ? ? A CYS 36 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 413 A ZN 902 1_555 ? ? ? ? ? ? ? 2.381 ? ? metalc6 metalc ? ? A CYS 39 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 416 A ZN 902 1_555 ? ? ? ? ? ? ? 2.373 ? ? metalc7 metalc ? ? A HIS 44 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 421 A ZN 902 1_555 ? ? ? ? ? ? ? 2.294 ? ? metalc8 metalc ? ? A CYS 49 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 426 A ZN 902 1_555 ? ? ? ? ? ? ? 2.396 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 901 ? 4 'binding site for residue ZN A 901' AC2 Software A ZN 902 ? 4 'binding site for residue ZN A 902' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 15 ? CYS A 392 . ? 1_555 ? 2 AC1 4 CYS A 18 ? CYS A 395 . ? 1_555 ? 3 AC1 4 HIS A 23 ? HIS A 400 . ? 1_555 ? 4 AC1 4 CYS A 28 ? CYS A 405 . ? 1_555 ? 5 AC2 4 CYS A 36 ? CYS A 413 . ? 1_555 ? 6 AC2 4 CYS A 39 ? CYS A 416 . ? 1_555 ? 7 AC2 4 HIS A 44 ? HIS A 421 . ? 1_555 ? 8 AC2 4 CYS A 49 ? CYS A 426 . ? 1_555 ? # _atom_sites.entry_id 5I1R _atom_sites.fract_transf_matrix[1][1] 0.001000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.001000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.001000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 378 378 MET MET A . n A 1 2 GLN 2 379 379 GLN GLN A . n A 1 3 ARG 3 380 380 ARG ARG A . n A 1 4 GLY 4 381 381 GLY GLY A . n A 1 5 ASN 5 382 382 ASN ASN A . n A 1 6 PHE 6 383 383 PHE PHE A . n A 1 7 ARG 7 384 384 ARG ARG A . n A 1 8 ASN 8 385 385 ASN ASN A . n A 1 9 GLN 9 386 386 GLN GLN A . n A 1 10 ARG 10 387 387 ARG ARG A . n A 1 11 LYS 11 388 388 LYS LYS A . n A 1 12 ILE 12 389 389 ILE ILE A . n A 1 13 VAL 13 390 390 VAL VAL A . n A 1 14 LYS 14 391 391 LYS LYS A . n A 1 15 CYS 15 392 392 CYS CYS A . n A 1 16 PHE 16 393 393 PHE PHE A . n A 1 17 ASN 17 394 394 ASN ASN A . n A 1 18 CYS 18 395 395 CYS CYS A . n A 1 19 GLY 19 396 396 GLY GLY A . n A 1 20 LYS 20 397 397 LYS LYS A . n A 1 21 GLU 21 398 398 GLU GLU A . n A 1 22 GLY 22 399 399 GLY GLY A . n A 1 23 HIS 23 400 400 HIS HIS A . n A 1 24 THR 24 401 401 THR THR A . n A 1 25 ALA 25 402 402 ALA ALA A . n A 1 26 ARG 26 403 403 ARG ARG A . n A 1 27 ASN 27 404 404 ASN ASN A . n A 1 28 CYS 28 405 405 CYS CYS A . n A 1 29 ARG 29 406 406 ARG ARG A . n A 1 30 ALA 30 407 407 ALA ALA A . n A 1 31 PRO 31 408 408 PRO PRO A . n A 1 32 ARG 32 409 409 ARG ARG A . n A 1 33 LYS 33 410 410 LYS LYS A . n A 1 34 LYS 34 411 411 LYS LYS A . n A 1 35 GLY 35 412 412 GLY GLY A . n A 1 36 CYS 36 413 413 CYS CYS A . n A 1 37 TRP 37 414 414 TRP TRP A . n A 1 38 LYS 38 415 415 LYS LYS A . n A 1 39 CYS 39 416 416 CYS CYS A . n A 1 40 GLY 40 417 417 GLY GLY A . n A 1 41 LYS 41 418 418 LYS LYS A . n A 1 42 GLU 42 419 419 GLU GLU A . n A 1 43 GLY 43 420 420 GLY GLY A . n A 1 44 HIS 44 421 421 HIS HIS A . n A 1 45 GLN 45 422 422 GLN GLN A . n A 1 46 MET 46 423 423 MET MET A . n A 1 47 LYS 47 424 424 LYS LYS A . n A 1 48 ASP 48 425 425 ASP ASP A . n A 1 49 CYS 49 426 426 CYS CYS A . n A 1 50 THR 50 427 427 THR THR A . n A 1 51 GLU 51 428 428 GLU GLU A . n A 1 52 ARG 52 429 429 ARG ARG A . n A 1 53 GLN 53 430 430 GLN GLN A . n A 1 54 ALA 54 431 431 ALA ALA A . n A 1 55 ASN 55 432 432 ASN ASN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 901 901 ZN ZN2 A . C 2 ZN 1 902 902 ZN ZN2 A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 15 ? A CYS 392 ? 1_555 ZN ? B ZN . ? A ZN 901 ? 1_555 SG ? A CYS 18 ? A CYS 395 ? 1_555 112.0 ? 2 SG ? A CYS 15 ? A CYS 392 ? 1_555 ZN ? B ZN . ? A ZN 901 ? 1_555 NE2 ? A HIS 23 ? A HIS 400 ? 1_555 98.6 ? 3 SG ? A CYS 18 ? A CYS 395 ? 1_555 ZN ? B ZN . ? A ZN 901 ? 1_555 NE2 ? A HIS 23 ? A HIS 400 ? 1_555 101.6 ? 4 SG ? A CYS 15 ? A CYS 392 ? 1_555 ZN ? B ZN . ? A ZN 901 ? 1_555 SG ? A CYS 28 ? A CYS 405 ? 1_555 117.8 ? 5 SG ? A CYS 18 ? A CYS 395 ? 1_555 ZN ? B ZN . ? A ZN 901 ? 1_555 SG ? A CYS 28 ? A CYS 405 ? 1_555 120.0 ? 6 NE2 ? A HIS 23 ? A HIS 400 ? 1_555 ZN ? B ZN . ? A ZN 901 ? 1_555 SG ? A CYS 28 ? A CYS 405 ? 1_555 101.8 ? 7 SG ? A CYS 36 ? A CYS 413 ? 1_555 ZN ? C ZN . ? A ZN 902 ? 1_555 SG ? A CYS 39 ? A CYS 416 ? 1_555 109.2 ? 8 SG ? A CYS 36 ? A CYS 413 ? 1_555 ZN ? C ZN . ? A ZN 902 ? 1_555 NE2 ? A HIS 44 ? A HIS 421 ? 1_555 100.4 ? 9 SG ? A CYS 39 ? A CYS 416 ? 1_555 ZN ? C ZN . ? A ZN 902 ? 1_555 NE2 ? A HIS 44 ? A HIS 421 ? 1_555 105.1 ? 10 SG ? A CYS 36 ? A CYS 413 ? 1_555 ZN ? C ZN . ? A ZN 902 ? 1_555 SG ? A CYS 49 ? A CYS 426 ? 1_555 117.6 ? 11 SG ? A CYS 39 ? A CYS 416 ? 1_555 ZN ? C ZN . ? A ZN 902 ? 1_555 SG ? A CYS 49 ? A CYS 426 ? 1_555 116.1 ? 12 NE2 ? A HIS 44 ? A HIS 421 ? 1_555 ZN ? C ZN . ? A ZN 902 ? 1_555 SG ? A CYS 49 ? A CYS 426 ? 1_555 106.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-03-30 2 'Structure model' 1 1 2016-06-29 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other 5 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' entity 3 3 'Structure model' pdbx_database_status 4 3 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_entity.pdbx_number_of_molecules' 4 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 5 3 'Structure model' '_pdbx_nmr_spectrometer.model' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'Nucleocapsid protein of human immunodeficiency virus 1 (HIV-1)' 0.2 ? mM '[U-13C; U-15N; U-2H]' 1 'sodium chloride' 50 ? mM 'natural abundance' 1 'sodium phosphate' 20 ? mM 'natural abundance' 1 Dithiothreitol 1 ? mM 'natural abundance' 1 'zinc chloride' 0.1 ? mM 'natural abundance' 2 'Nucleocapsid protein of human immunodeficiency virus 1 (HIV-1)' 0.2 ? mM '[U-13C; U-15N; U-2H]' 2 'sodium chloride' 50 ? mM 'natural abundance' 2 'sodium phosphate' 20 ? mM 'natural abundance' 2 Dithiothreitol 1 ? mM 'natural abundance' 2 'zinc chloride' 0.1 ? mM 'natural abundance' 2 'neutral bicelles' 5 ? % 'natural abundance' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 5 HE22 A GLN 386 ? B H A LYS 388 ? B 1.17 2 5 H3 A MET 378 ? C H A GLN 379 ? C 1.25 3 5 HH22 A ARG 380 ? E OD1 A ASN 382 ? E 1.58 4 6 HE22 A GLN 386 ? A HE A ARG 387 ? A 1.30 5 7 HD22 A ASN 382 ? C HE A ARG 384 ? C 1.27 6 8 H A GLN 379 ? B HH11 A ARG 380 ? B 1.23 7 8 H A GLN 379 ? C HH11 A ARG 380 ? C 1.23 8 8 HH21 A ARG 384 ? B HD22 A ASN 385 ? B 1.26 9 8 H3 A MET 378 ? E HH12 A ARG 380 ? E 1.26 10 8 HE22 A GLN 386 ? A HH21 A ARG 387 ? A 1.26 11 8 H1 A MET 378 ? B HE21 A GLN 379 ? B 1.35 12 8 O A VAL 390 ? B H A GLY 399 ? ? 1.54 13 8 O A GLN 379 ? C HD22 A ASN 382 ? C 1.59 14 9 H1 A MET 378 ? D HE22 A GLN 379 ? D 1.23 15 9 HE22 A GLN 379 ? B HH11 A ARG 380 ? B 1.26 16 9 HE22 A GLN 379 ? A HH11 A ARG 380 ? A 1.28 17 9 HE22 A GLN 430 ? B HD21 A ASN 432 ? B 1.28 18 9 HD22 A ASN 382 ? E H A LYS 388 ? E 1.30 19 9 HH11 A ARG 429 ? B OE1 A GLN 430 ? B 1.58 20 10 HE A ARG 429 ? D H A GLN 430 ? D 1.32 21 11 HD22 A ASN 385 ? D HH11 A ARG 387 ? D 1.17 22 11 HD22 A ASN 385 ? E HH11 A ARG 387 ? E 1.22 23 11 HE22 A GLN 386 ? B HH22 A ARG 387 ? B 1.31 24 11 H3 A MET 378 ? C HD21 A ASN 382 ? C 1.33 25 11 O A GLN 386 ? D HE A ARG 387 ? D 1.48 26 11 HE A ARG 429 ? B O A GLN 430 ? B 1.53 27 11 O A MET 378 ? A HH12 A ARG 380 ? A 1.54 28 11 HH11 A ARG 380 ? C OD1 A ASN 382 ? C 1.55 29 11 HH12 A ARG 429 ? A O A GLN 430 ? A 1.56 30 11 O A GLN 379 ? C OD1 A ASN 382 ? C 2.16 31 12 HD22 A ASN 382 ? B H A ASN 385 ? B 1.05 32 12 HE21 A GLN 386 ? E HH21 A ARG 387 ? E 1.15 33 12 H2 A MET 378 ? C HH12 A ARG 380 ? C 1.30 34 12 HE A ARG 429 ? B H A GLN 430 ? B 1.31 35 15 HH12 A ARG 384 ? B HZ1 A LYS 388 ? B 1.24 36 16 HH12 A ARG 380 ? D HH22 A ARG 384 ? D 1.27 37 17 HH12 A ARG 429 ? D HD22 A ASN 432 ? D 1.16 38 17 HH22 A ARG 429 ? D HE22 A GLN 430 ? D 1.17 39 17 H2 A MET 378 ? E HH11 A ARG 380 ? E 1.26 40 17 HE22 A GLN 386 ? B HH21 A ARG 387 ? B 1.29 41 17 HE21 A GLN 430 ? A O A ALA 431 ? A 1.57 42 17 O A GLN 386 ? E HE A ARG 387 ? E 1.60 43 18 H2 A MET 378 ? D HH12 A ARG 380 ? D 1.27 44 18 H1 A MET 378 ? A H A GLN 379 ? A 1.29 45 18 HH21 A ARG 384 ? A HE22 A GLN 386 ? A 1.31 46 18 O A GLN 379 ? A HE A ARG 380 ? A 1.60 47 19 H2 A MET 378 ? D HH11 A ARG 380 ? D 1.28 48 20 HH21 A ARG 384 ? A HE22 A GLN 386 ? A 1.19 49 20 HE21 A GLN 379 ? A HH12 A ARG 380 ? A 1.20 50 20 H3 A MET 378 ? D HE22 A GLN 379 ? D 1.30 51 20 HH22 A ARG 384 ? D HE22 A GLN 386 ? D 1.30 52 20 H1 A MET 378 ? E HE22 A GLN 379 ? E 1.31 53 20 H3 A MET 378 ? B HE22 A GLN 379 ? B 1.35 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 382 ? A -171.80 -70.46 2 1 ASN A 382 ? C 62.77 156.31 3 1 ASN A 382 ? E -173.99 -50.80 4 1 PHE A 383 ? B -57.58 -168.37 5 1 ARG A 384 ? A -171.48 98.94 6 1 ASN A 385 ? B 88.41 117.05 7 1 ASN A 385 ? D -164.27 71.19 8 1 GLN A 386 ? C 61.13 -129.52 9 1 GLN A 386 ? D 34.89 -116.88 10 1 GLN A 386 ? E 36.56 -133.41 11 1 ARG A 387 ? B 65.87 82.92 12 2 ARG A 380 ? B -164.72 -45.30 13 2 ASN A 382 ? A 40.54 102.18 14 2 PHE A 383 ? C 52.02 77.00 15 2 ASN A 385 ? C 49.44 -154.00 16 2 ASN A 385 ? D -165.30 -4.95 17 2 GLN A 386 ? A -68.45 -166.56 18 2 GLN A 386 ? D 57.47 152.12 19 2 ARG A 387 ? A 65.57 140.60 20 2 ARG A 387 ? C 92.43 42.63 21 2 LYS A 388 ? E -50.00 175.05 22 3 PHE A 383 ? E 124.91 173.12 23 3 GLN A 386 ? A -112.34 -161.11 24 3 ARG A 387 ? B -55.26 -4.78 25 3 LYS A 388 ? B -48.08 167.02 26 3 ARG A 429 ? E -68.85 75.04 27 4 ASN A 382 ? C -129.21 -124.23 28 4 PHE A 383 ? B 50.87 115.36 29 4 PHE A 383 ? C 86.33 177.05 30 4 PHE A 383 ? D 59.67 155.41 31 4 PHE A 383 ? E 84.29 155.35 32 4 ASN A 385 ? A 73.84 -141.24 33 4 ASN A 385 ? C 52.96 -159.37 34 4 ASN A 385 ? D 66.74 163.24 35 4 ASN A 385 ? E 38.04 98.75 36 4 ARG A 387 ? A -160.39 -47.71 37 4 ARG A 387 ? D -92.80 37.44 38 4 ARG A 387 ? E -173.52 -65.07 39 4 THR A 427 ? B -69.76 97.00 40 4 THR A 427 ? E -64.26 27.21 41 4 ARG A 429 ? D -57.85 171.29 42 4 ARG A 429 ? E -18.53 109.92 43 5 ARG A 380 ? E -152.23 -136.70 44 5 ASN A 382 ? B -164.28 33.22 45 5 ASN A 382 ? D -143.82 -152.21 46 5 ASN A 382 ? E -99.73 -80.45 47 5 PHE A 383 ? E 49.20 167.24 48 5 ARG A 384 ? C -50.43 90.82 49 5 ASN A 385 ? B 79.30 100.73 50 5 ASN A 385 ? C -140.58 -140.26 51 5 ASN A 385 ? D -165.00 25.33 52 5 ASN A 385 ? E 72.17 73.26 53 5 GLN A 386 ? A -132.15 -80.66 54 5 ARG A 387 ? E -174.39 43.16 55 5 VAL A 390 ? D -49.89 106.94 56 5 THR A 427 ? D -50.02 98.91 57 5 THR A 427 ? E -48.75 100.06 58 5 GLU A 428 ? A -39.42 125.53 59 5 GLU A 428 ? B -32.03 145.78 60 5 GLU A 428 ? C -34.71 147.49 61 6 ARG A 380 ? A 50.05 102.86 62 6 ASN A 382 ? D -130.95 -155.41 63 6 ASN A 382 ? E -166.23 -161.13 64 6 ARG A 384 ? A -96.47 55.07 65 6 ARG A 384 ? B -88.17 -133.88 66 6 ARG A 384 ? C -110.36 -92.97 67 6 ARG A 384 ? E -115.42 -100.37 68 6 ASN A 385 ? B 178.93 167.25 69 6 GLN A 386 ? C -79.17 -77.57 70 6 GLN A 386 ? E -148.71 -14.54 71 6 ARG A 387 ? B -24.48 -75.43 72 6 ARG A 387 ? E -40.07 164.18 73 6 THR A 427 ? D -144.10 -45.54 74 6 GLU A 428 ? C -44.91 152.42 75 7 GLN A 379 ? A -66.84 71.00 76 7 ARG A 380 ? B 177.51 50.71 77 7 ASN A 382 ? A -158.09 -71.19 78 7 ASN A 382 ? D -167.16 -95.67 79 7 ARG A 384 ? C -56.34 0.53 80 7 ARG A 384 ? D -48.24 -17.98 81 7 ARG A 384 ? E -74.82 22.31 82 7 ASN A 385 ? A -160.48 107.48 83 7 LYS A 411 ? ? 84.45 43.82 84 8 GLN A 379 ? B -142.05 -151.46 85 8 ARG A 380 ? B 65.03 148.38 86 8 ARG A 380 ? C 76.01 110.00 87 8 ARG A 380 ? D 177.62 142.85 88 8 ARG A 380 ? E -164.03 112.43 89 8 ASN A 382 ? B 117.20 -109.85 90 8 ASN A 382 ? D -153.82 63.98 91 8 ASN A 382 ? E 37.07 -92.03 92 8 PHE A 383 ? B 76.14 142.47 93 8 PHE A 383 ? C 178.50 102.74 94 8 ARG A 384 ? A -49.75 -179.64 95 8 ASN A 385 ? A -81.84 41.41 96 8 ASN A 385 ? B 73.19 77.93 97 8 ASN A 385 ? C -70.02 46.37 98 8 ASN A 385 ? E -165.80 117.51 99 8 GLN A 386 ? A 30.83 127.15 100 8 GLN A 386 ? C 55.80 105.19 101 8 ARG A 387 ? A 142.71 24.69 102 8 ARG A 387 ? C -155.63 13.22 103 8 LYS A 388 ? A -52.16 171.91 104 8 THR A 427 ? A -52.47 93.45 105 8 GLU A 428 ? D -53.28 92.59 106 8 GLU A 428 ? E -48.34 171.65 107 8 ARG A 429 ? B -29.77 148.05 108 8 ARG A 429 ? E -43.77 166.37 109 9 ASN A 382 ? A -159.23 -143.67 110 9 ASN A 382 ? B 60.25 132.42 111 9 ARG A 384 ? A 86.95 138.65 112 9 ASN A 385 ? D -90.52 -109.79 113 9 ASN A 385 ? E 61.81 -136.52 114 9 GLN A 386 ? D 53.98 114.28 115 9 GLN A 386 ? E 38.46 58.00 116 9 ARG A 387 ? A 47.06 152.28 117 9 ARG A 387 ? B -48.67 -7.79 118 9 ARG A 387 ? C 50.14 174.64 119 9 ARG A 387 ? E 39.86 43.21 120 9 THR A 427 ? E -151.26 -67.39 121 9 GLN A 430 ? B -48.61 158.54 122 9 ALA A 431 ? B -43.64 164.59 123 10 GLN A 379 ? A 83.89 175.39 124 10 GLN A 379 ? B 59.34 90.15 125 10 GLN A 379 ? C 60.19 142.33 126 10 GLN A 379 ? D 69.51 90.64 127 10 GLN A 379 ? E 71.78 -80.81 128 10 ARG A 380 ? C 62.18 -70.87 129 10 ARG A 380 ? E 40.45 -129.11 130 10 PHE A 383 ? A 29.98 -137.85 131 10 PHE A 383 ? B 56.03 -161.62 132 10 PHE A 383 ? D 41.21 -166.25 133 10 PHE A 383 ? E 55.56 144.26 134 10 GLN A 386 ? A 95.58 122.01 135 10 GLN A 386 ? B 95.69 115.51 136 10 GLN A 386 ? D 82.08 80.70 137 10 GLN A 386 ? E 99.76 56.12 138 10 ARG A 387 ? C -153.98 -5.25 139 10 THR A 427 ? B -133.48 -32.86 140 11 GLN A 379 ? C -8.30 73.26 141 11 ARG A 380 ? C 33.25 -150.03 142 11 ARG A 380 ? D -156.58 8.44 143 11 ASN A 382 ? B 154.82 135.58 144 11 ASN A 382 ? C 168.20 82.63 145 11 ASN A 382 ? E 70.30 96.29 146 11 PHE A 383 ? A -117.84 -83.55 147 11 PHE A 383 ? D 68.63 145.60 148 11 ARG A 384 ? A 66.10 128.64 149 11 ARG A 384 ? B 158.14 47.06 150 11 ARG A 384 ? E -171.24 54.56 151 11 ASN A 385 ? C 43.89 109.42 152 11 ASN A 385 ? D 105.83 -145.74 153 11 ARG A 387 ? A -157.14 -138.79 154 11 ARG A 387 ? D -162.48 32.72 155 11 ARG A 387 ? E -152.96 -61.63 156 11 THR A 427 ? A -39.50 106.19 157 11 GLN A 430 ? B -43.93 157.75 158 11 GLN A 430 ? E -40.04 167.98 159 11 ALA A 431 ? E -35.27 127.79 160 12 GLN A 379 ? A 26.22 107.49 161 12 ASN A 382 ? C -173.89 -170.00 162 12 PHE A 383 ? B -78.71 26.34 163 12 ARG A 384 ? A -126.07 -87.88 164 12 ARG A 384 ? B 49.87 26.65 165 12 ARG A 384 ? D 45.85 87.70 166 12 ARG A 384 ? E 98.98 110.89 167 12 ASN A 385 ? A 154.91 53.45 168 12 GLN A 386 ? A -121.56 -163.91 169 12 GLN A 386 ? B 20.21 -131.50 170 12 ARG A 387 ? B 56.06 82.23 171 12 ARG A 387 ? C -43.17 165.62 172 12 ARG A 387 ? E 43.42 -96.56 173 12 LYS A 388 ? A -56.80 87.67 174 12 LYS A 391 ? A 175.37 72.09 175 12 LYS A 391 ? C -174.47 86.83 176 12 ALA A 431 ? B -45.52 160.92 177 13 ARG A 380 ? A -163.17 -44.55 178 13 ARG A 380 ? C -177.88 -86.58 179 13 ASN A 382 ? B 65.02 -130.27 180 13 ASN A 382 ? E 59.66 -143.28 181 13 PHE A 383 ? B -119.40 -110.15 182 13 ARG A 384 ? A -53.66 -105.89 183 13 ARG A 384 ? B 75.18 111.22 184 13 ARG A 384 ? C 92.81 169.65 185 13 ARG A 384 ? D 70.33 -103.10 186 13 ARG A 384 ? E 36.12 -134.71 187 13 ASN A 385 ? A 64.71 -164.60 188 13 GLN A 386 ? D -150.22 38.54 189 14 ARG A 380 ? E -171.63 97.36 190 14 ASN A 382 ? A -158.65 34.43 191 14 ASN A 382 ? C -174.15 100.11 192 14 ASN A 382 ? D -130.19 -83.57 193 14 PHE A 383 ? C -154.26 -95.92 194 14 PHE A 383 ? D 90.72 -135.97 195 14 ARG A 384 ? C -148.23 -85.09 196 14 ASN A 385 ? C -178.67 77.55 197 14 ASN A 385 ? D 87.80 86.64 198 14 ASN A 385 ? E 37.12 10.54 199 14 ARG A 387 ? C -62.15 -173.27 200 14 ARG A 387 ? D -56.80 -169.64 201 14 ARG A 387 ? E -75.64 -108.48 202 14 LYS A 388 ? D -48.78 165.81 203 14 THR A 427 ? A -48.03 98.68 204 14 THR A 427 ? B -112.34 -167.17 205 14 GLU A 428 ? B -32.99 149.25 206 14 GLU A 428 ? E -36.66 131.59 207 14 ARG A 429 ? C -32.67 138.04 208 14 ARG A 429 ? D -39.18 114.34 209 14 ARG A 429 ? E -33.24 95.28 210 15 PHE A 383 ? C 68.50 173.02 211 15 PHE A 383 ? D 80.54 154.24 212 15 ARG A 384 ? D -142.90 -131.29 213 15 ASN A 385 ? A 179.32 -89.37 214 15 ASN A 385 ? C 169.92 151.95 215 15 ASN A 385 ? D -154.01 61.24 216 15 ASN A 385 ? E 70.71 44.49 217 15 GLN A 386 ? D -127.83 -137.97 218 15 LYS A 391 ? B -179.73 140.39 219 15 LYS A 391 ? E -175.52 104.41 220 16 ASN A 382 ? D 62.64 160.95 221 16 ARG A 384 ? B -96.62 32.89 222 16 ARG A 384 ? D -147.87 23.52 223 16 ARG A 384 ? E -131.21 -38.45 224 16 ASN A 385 ? E 161.59 77.20 225 16 ARG A 387 ? A 40.61 178.71 226 16 ARG A 387 ? B 41.59 -93.02 227 16 ARG A 387 ? C 110.93 73.07 228 16 ARG A 387 ? D 71.53 87.79 229 16 ARG A 429 ? C -48.49 155.05 230 17 GLN A 379 ? D 69.82 120.87 231 17 GLN A 379 ? E 52.04 173.83 232 17 ARG A 380 ? B 39.32 84.19 233 17 ARG A 380 ? E 177.49 158.63 234 17 ASN A 382 ? E -168.52 -98.80 235 17 PHE A 383 ? A -164.72 84.46 236 17 PHE A 383 ? B 87.35 172.34 237 17 PHE A 383 ? E 67.02 166.93 238 17 ARG A 384 ? B -132.19 -115.78 239 17 ARG A 384 ? C 39.59 151.92 240 17 GLN A 386 ? B -98.06 -157.32 241 17 GLN A 386 ? E -61.50 76.40 242 17 ARG A 387 ? E -143.71 -117.07 243 17 LYS A 391 ? D -78.46 -80.98 244 17 THR A 427 ? C -125.64 -168.77 245 17 GLU A 428 ? A -36.37 95.74 246 17 GLU A 428 ? C -31.54 93.01 247 17 GLU A 428 ? E -37.51 -177.98 248 17 ARG A 429 ? B -17.69 118.22 249 17 ARG A 429 ? E -2.80 84.87 250 17 ALA A 431 ? C -47.52 168.32 251 18 ARG A 380 ? A 65.08 98.75 252 18 ASN A 382 ? B 74.13 50.86 253 18 ASN A 382 ? D -119.60 -151.67 254 18 PHE A 383 ? E -142.62 -21.85 255 18 ARG A 384 ? A -175.91 -141.57 256 18 ASN A 385 ? A -176.56 41.01 257 18 ASN A 385 ? D -172.14 86.48 258 18 ASN A 385 ? E -138.75 -158.99 259 18 GLN A 386 ? D 177.89 156.84 260 18 ARG A 387 ? B 57.17 -15.30 261 18 ARG A 387 ? C -101.15 -114.60 262 18 ARG A 387 ? E 74.07 36.20 263 18 LYS A 391 ? A -162.79 105.93 264 18 LYS A 391 ? E -165.64 99.05 265 18 GLU A 428 ? B -39.58 152.13 266 18 GLU A 428 ? C -37.61 130.97 267 18 GLU A 428 ? D -37.04 -178.79 268 18 ARG A 429 ? D -9.81 120.61 269 19 ASN A 382 ? B -126.29 -163.36 270 19 ASN A 382 ? C -138.36 -122.65 271 19 PHE A 383 ? A 43.10 -105.76 272 19 PHE A 383 ? B 62.49 171.76 273 19 PHE A 383 ? C 82.03 122.03 274 19 PHE A 383 ? E 90.27 116.09 275 19 ASN A 385 ? D -170.82 -146.99 276 19 GLN A 386 ? D -69.14 62.90 277 19 ARG A 387 ? A 61.02 -120.67 278 19 ARG A 387 ? B 47.54 -144.32 279 19 LYS A 391 ? A -128.38 -68.40 280 19 LYS A 391 ? B -81.22 -91.14 281 19 LYS A 391 ? C -106.51 -64.58 282 19 LYS A 391 ? D -80.47 -83.92 283 19 LYS A 391 ? E -107.88 -65.85 284 20 ASN A 382 ? A -158.81 -13.16 285 20 ASN A 382 ? C 90.63 88.32 286 20 ASN A 382 ? E -160.94 102.49 287 20 ARG A 384 ? C 91.04 156.21 288 20 ARG A 384 ? D 82.65 91.93 289 20 ASN A 385 ? A -173.87 147.91 290 20 ASN A 385 ? C -171.44 137.36 291 20 GLN A 386 ? E -57.50 -163.04 292 20 ARG A 387 ? D -96.64 47.69 293 20 LYS A 388 ? E -45.55 164.95 294 20 LYS A 391 ? B -150.03 -152.98 295 20 LYS A 391 ? C -172.26 -176.92 296 21 GLN A 379 ? A 48.81 109.46 297 21 ARG A 380 ? B 56.84 70.50 298 21 ARG A 380 ? C 167.11 121.19 299 21 ARG A 380 ? E 67.59 121.53 300 21 ASN A 382 ? B -136.18 -62.83 301 21 ASN A 382 ? C 86.28 124.49 302 21 PHE A 383 ? A 74.86 141.20 303 21 PHE A 383 ? B 84.87 170.67 304 21 ARG A 384 ? A -141.63 -73.49 305 21 ARG A 384 ? C 123.72 128.13 306 21 ASN A 385 ? B 93.21 -57.65 307 21 ASN A 385 ? C 75.93 -163.58 308 21 ASN A 385 ? D 177.91 43.10 309 21 ARG A 387 ? A 174.91 31.77 310 21 ARG A 387 ? C 166.65 95.68 311 21 ARG A 387 ? E 54.23 120.53 312 21 GLU A 428 ? A -33.98 141.87 313 21 GLU A 428 ? B -39.20 152.97 314 21 GLU A 428 ? D -38.46 171.04 315 21 ARG A 429 ? B -41.62 95.16 316 21 ARG A 429 ? D -28.61 158.62 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 8 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 429 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id A _pdbx_validate_planes.rmsd 0.078 _pdbx_validate_planes.type 'SIDE CHAIN' # _pdbx_audit_support.funding_organization 'National Institutes of Health' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN #