data_5IBN # _entry.id 5IBN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5IBN pdb_00005ibn 10.2210/pdb5ibn/pdb WWPDB D_1000218580 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5IBN _pdbx_database_status.recvd_initial_deposition_date 2016-02-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tripathi, S.K.' 1 'Padmanabhan, B.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Plos One' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1932-6203 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 11 _citation.language ? _citation.page_first e0156344 _citation.page_last e0156344 _citation.title 'A Novel Phenanthridionone Based Scaffold As a Potential Inhibitor of the BRD2 Bromodomain: Crystal Structure of the Complex' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1371/journal.pone.0156344 _citation.pdbx_database_id_PubMed 27243809 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tripathi, S.' 1 ? primary 'Mathur, S.' 2 ? primary 'Deshmukh, P.' 3 ? primary 'Manjula, R.' 4 ? primary 'Padmanabhan, B.' 5 ? # _cell.entry_id 5IBN _cell.length_a 32.080 _cell.length_b 52.460 _cell.length_c 71.370 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IBN _symmetry.space_group_name_H-M 'P 2 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bromodomain-containing protein 2' 13052.965 1 ? ? 'UNP residues 348-455' ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 5 ? ? ? ? 4 non-polymer syn 'TRIETHYLENE GLYCOL' 150.173 2 ? ? ? ? 5 water nat water 18.015 164 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'O27.1.1,Really interesting new gene 3 protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ANPEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSN CYKYNPPDHDVVAMARKLQDVFEFRYAKMPD ; _entity_poly.pdbx_seq_one_letter_code_can ;ANPEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSN CYKYNPPDHDVVAMARKLQDVFEFRYAKMPD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ASN n 1 3 PRO n 1 4 GLU n 1 5 GLN n 1 6 LEU n 1 7 LYS n 1 8 HIS n 1 9 CYS n 1 10 ASN n 1 11 GLY n 1 12 ILE n 1 13 LEU n 1 14 LYS n 1 15 GLU n 1 16 LEU n 1 17 LEU n 1 18 SER n 1 19 LYS n 1 20 LYS n 1 21 HIS n 1 22 ALA n 1 23 ALA n 1 24 TYR n 1 25 ALA n 1 26 TRP n 1 27 PRO n 1 28 PHE n 1 29 TYR n 1 30 LYS n 1 31 PRO n 1 32 VAL n 1 33 ASP n 1 34 ALA n 1 35 SER n 1 36 ALA n 1 37 LEU n 1 38 GLY n 1 39 LEU n 1 40 HIS n 1 41 ASP n 1 42 TYR n 1 43 HIS n 1 44 ASP n 1 45 ILE n 1 46 ILE n 1 47 LYS n 1 48 HIS n 1 49 PRO n 1 50 MET n 1 51 ASP n 1 52 LEU n 1 53 SER n 1 54 THR n 1 55 VAL n 1 56 LYS n 1 57 ARG n 1 58 LYS n 1 59 MET n 1 60 GLU n 1 61 ASN n 1 62 ARG n 1 63 ASP n 1 64 TYR n 1 65 ARG n 1 66 ASP n 1 67 ALA n 1 68 GLN n 1 69 GLU n 1 70 PHE n 1 71 ALA n 1 72 ALA n 1 73 ASP n 1 74 VAL n 1 75 ARG n 1 76 LEU n 1 77 MET n 1 78 PHE n 1 79 SER n 1 80 ASN n 1 81 CYS n 1 82 TYR n 1 83 LYS n 1 84 TYR n 1 85 ASN n 1 86 PRO n 1 87 PRO n 1 88 ASP n 1 89 HIS n 1 90 ASP n 1 91 VAL n 1 92 VAL n 1 93 ALA n 1 94 MET n 1 95 ALA n 1 96 ARG n 1 97 LYS n 1 98 LEU n 1 99 GLN n 1 100 ASP n 1 101 VAL n 1 102 PHE n 1 103 GLU n 1 104 PHE n 1 105 ARG n 1 106 TYR n 1 107 ALA n 1 108 LYS n 1 109 MET n 1 110 PRO n 1 111 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 111 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BRD2, KIAA9001, RING3' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BRD2_HUMAN _struct_ref.pdbx_db_accession P25440 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYK YNPPDHDVVAMARKLQDVFEFRYAKMPD ; _struct_ref.pdbx_align_begin 348 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5IBN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 111 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P25440 _struct_ref_seq.db_align_beg 348 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 455 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 348 _struct_ref_seq.pdbx_auth_seq_align_end 455 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5IBN ALA A 1 ? UNP P25440 ? ? 'expression tag' 345 1 1 5IBN ASN A 2 ? UNP P25440 ? ? 'expression tag' 346 2 1 5IBN PRO A 3 ? UNP P25440 ? ? 'expression tag' 347 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PGE non-polymer . 'TRIETHYLENE GLYCOL' ? 'C6 H14 O4' 150.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5IBN _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.53 _exptl_crystal.description 'Square thin plates' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.3 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 300 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '30% PEG MME 2000, 20% glycerol, 50mM NaCl, 50mM Tris pH 7.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details 'Grazing angle 2.8 mrad' _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-07-22 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.7293 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE BM14' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.7293 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BM14 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5IBN _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 0.940 _reflns.d_resolution_low 42.240 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 78817 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.700 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 8.000 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.089 _reflns.pdbx_netI_over_av_sigmaI 5.612 _reflns.pdbx_netI_over_sigmaI 9.500 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 0.940 _reflns_shell.d_res_low 0.990 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.000 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100.000 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 2.268 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 7.900 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5IBN _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 74948 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 0.94 _refine.ls_percent_reflns_obs 99.63 _refine.ls_R_factor_obs 0.12921 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.12841 _refine.ls_R_factor_R_free 0.14510 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 3889 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.980 _refine.correlation_coeff_Fo_to_Fc_free 0.976 _refine.B_iso_mean 13.809 _refine.aniso_B[1][1] 0.06 _refine.aniso_B[2][2] -0.25 _refine.aniso_B[3][3] 0.19 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 2e3k _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.017 _refine.pdbx_overall_ESU_R_Free 0.018 _refine.overall_SU_ML 0.012 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 0.494 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 916 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 51 _refine_hist.number_atoms_solvent 164 _refine_hist.number_atoms_total 1131 _refine_hist.d_res_high 0.94 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.019 ? 1090 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1040 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.614 1.984 ? 1477 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.888 3.000 ? 2427 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.405 5.000 ? 135 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.589 24.035 ? 57 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.101 15.000 ? 189 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 22.753 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr 0.099 0.200 ? 148 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.021 ? 1223 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 256 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 2.803 3.000 ? 2129 'X-RAY DIFFRACTION' ? r_sphericity_free 29.445 5.000 ? 48 'X-RAY DIFFRACTION' ? r_sphericity_bonded 7.949 5.000 ? 2232 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 0.940 _refine_ls_shell.d_res_low 0.964 _refine_ls_shell.number_reflns_R_work 5479 _refine_ls_shell.R_factor_R_work 0.337 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.365 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 285 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 5IBN _struct.title 'Ultra high resolution crystal structure of the apo- form of second bromodomain of BRD2.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5IBN _struct_keywords.text 'BET-family, acetyl-lysine binding, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 4 ? J N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 1 ? LEU A 17 ? ALA A 345 LEU A 361 1 ? 17 HELX_P HELX_P2 AA2 SER A 18 ? LYS A 20 ? SER A 362 LYS A 364 5 ? 3 HELX_P HELX_P3 AA3 HIS A 21 ? TRP A 26 ? HIS A 365 TRP A 370 1 ? 6 HELX_P HELX_P4 AA4 PRO A 27 ? TYR A 29 ? PRO A 371 TYR A 373 5 ? 3 HELX_P HELX_P5 AA5 ASP A 33 ? GLY A 38 ? ASP A 377 GLY A 382 1 ? 6 HELX_P HELX_P6 AA6 ASP A 41 ? ILE A 46 ? ASP A 385 ILE A 390 1 ? 6 HELX_P HELX_P7 AA7 ASP A 51 ? ASN A 61 ? ASP A 395 ASN A 405 1 ? 11 HELX_P HELX_P8 AA8 ASP A 66 ? ASN A 85 ? ASP A 410 ASN A 429 1 ? 20 HELX_P HELX_P9 AA9 HIS A 89 ? ALA A 107 ? HIS A 433 ALA A 451 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 501 ? 4 'binding site for residue CL A 501' AC2 Software A GOL 502 ? 3 'binding site for residue GOL A 502' AC3 Software A GOL 503 ? 4 'binding site for residue GOL A 503' AC4 Software A GOL 504 ? 5 'binding site for residue GOL A 504' AC5 Software A GOL 505 ? 9 'binding site for residue GOL A 505' AC6 Software A GOL 506 ? 6 'binding site for residue GOL A 506' AC7 Software A PGE 507 ? 12 'binding site for residue PGE A 507' AC8 Software A PGE 508 ? 5 'binding site for residue PGE A 508' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 GLN A 68 ? GLN A 412 . ? 2_565 ? 2 AC1 4 GLN A 68 ? GLN A 412 . ? 1_555 ? 3 AC1 4 ARG A 75 ? ARG A 419 . ? 1_555 ? 4 AC1 4 ARG A 75 ? ARG A 419 . ? 2_565 ? 5 AC2 3 TRP A 26 ? TRP A 370 . ? 1_555 ? 6 AC2 3 PRO A 27 ? PRO A 371 . ? 1_555 ? 7 AC2 3 MET A 94 ? MET A 438 . ? 1_555 ? 8 AC3 4 SER A 53 ? SER A 397 . ? 1_555 ? 9 AC3 4 THR A 54 ? THR A 398 . ? 1_555 ? 10 AC3 4 ARG A 57 ? ARG A 401 . ? 1_555 ? 11 AC3 4 HOH J . ? HOH A 712 . ? 1_555 ? 12 AC4 5 LEU A 39 ? LEU A 383 . ? 1_555 ? 13 AC4 5 ASN A 85 ? ASN A 429 . ? 1_555 ? 14 AC4 5 HOH J . ? HOH A 604 . ? 1_555 ? 15 AC4 5 HOH J . ? HOH A 614 . ? 1_555 ? 16 AC4 5 HOH J . ? HOH A 617 . ? 1_555 ? 17 AC5 9 TYR A 24 ? TYR A 368 . ? 1_555 ? 18 AC5 9 LYS A 58 ? LYS A 402 . ? 1_455 ? 19 AC5 9 ASP A 63 ? ASP A 407 . ? 1_455 ? 20 AC5 9 MET A 94 ? MET A 438 . ? 1_555 ? 21 AC5 9 LYS A 97 ? LYS A 441 . ? 1_555 ? 22 AC5 9 HOH J . ? HOH A 609 . ? 1_555 ? 23 AC5 9 HOH J . ? HOH A 627 . ? 1_455 ? 24 AC5 9 HOH J . ? HOH A 681 . ? 1_555 ? 25 AC5 9 HOH J . ? HOH A 715 . ? 1_555 ? 26 AC6 6 HIS A 43 ? HIS A 387 . ? 1_555 ? 27 AC6 6 ILE A 46 ? ILE A 390 . ? 1_555 ? 28 AC6 6 LYS A 47 ? LYS A 391 . ? 1_555 ? 29 AC6 6 PRO A 49 ? PRO A 393 . ? 1_555 ? 30 AC6 6 HOH J . ? HOH A 621 . ? 1_555 ? 31 AC6 6 HOH J . ? HOH A 673 . ? 1_555 ? 32 AC7 12 ARG A 65 ? ARG A 409 . ? 2_465 ? 33 AC7 12 ASP A 66 ? ASP A 410 . ? 2_465 ? 34 AC7 12 PRO A 87 ? PRO A 431 . ? 1_555 ? 35 AC7 12 ARG A 96 ? ARG A 440 . ? 1_555 ? 36 AC7 12 ASP A 100 ? ASP A 444 . ? 2_565 ? 37 AC7 12 VAL A 101 ? VAL A 445 . ? 2_565 ? 38 AC7 12 PHE A 104 ? PHE A 448 . ? 2_565 ? 39 AC7 12 HOH J . ? HOH A 619 . ? 1_555 ? 40 AC7 12 HOH J . ? HOH A 652 . ? 2_565 ? 41 AC7 12 HOH J . ? HOH A 665 . ? 1_555 ? 42 AC7 12 HOH J . ? HOH A 708 . ? 1_555 ? 43 AC7 12 HOH J . ? HOH A 735 . ? 1_555 ? 44 AC8 5 PRO A 3 ? PRO A 347 . ? 1_555 ? 45 AC8 5 LEU A 6 ? LEU A 350 . ? 1_555 ? 46 AC8 5 LYS A 7 ? LYS A 351 . ? 1_555 ? 47 AC8 5 ASN A 10 ? ASN A 354 . ? 1_555 ? 48 AC8 5 HOH J . ? HOH A 683 . ? 1_555 ? # _atom_sites.entry_id 5IBN _atom_sites.fract_transf_matrix[1][1] 0.031172 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019062 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014011 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 345 345 ALA ALA A . n A 1 2 ASN 2 346 346 ASN ASN A . n A 1 3 PRO 3 347 347 PRO PRO A . n A 1 4 GLU 4 348 348 GLU GLU A . n A 1 5 GLN 5 349 349 GLN GLN A . n A 1 6 LEU 6 350 350 LEU LEU A . n A 1 7 LYS 7 351 351 LYS LYS A . n A 1 8 HIS 8 352 352 HIS HIS A . n A 1 9 CYS 9 353 353 CYS CYS A . n A 1 10 ASN 10 354 354 ASN ASN A . n A 1 11 GLY 11 355 355 GLY GLY A . n A 1 12 ILE 12 356 356 ILE ILE A . n A 1 13 LEU 13 357 357 LEU LEU A . n A 1 14 LYS 14 358 358 LYS LYS A . n A 1 15 GLU 15 359 359 GLU GLU A . n A 1 16 LEU 16 360 360 LEU LEU A . n A 1 17 LEU 17 361 361 LEU LEU A . n A 1 18 SER 18 362 362 SER SER A . n A 1 19 LYS 19 363 363 LYS LYS A . n A 1 20 LYS 20 364 364 LYS LYS A . n A 1 21 HIS 21 365 365 HIS HIS A . n A 1 22 ALA 22 366 366 ALA ALA A . n A 1 23 ALA 23 367 367 ALA ALA A . n A 1 24 TYR 24 368 368 TYR TYR A . n A 1 25 ALA 25 369 369 ALA ALA A . n A 1 26 TRP 26 370 370 TRP TRP A . n A 1 27 PRO 27 371 371 PRO PRO A . n A 1 28 PHE 28 372 372 PHE PHE A . n A 1 29 TYR 29 373 373 TYR TYR A . n A 1 30 LYS 30 374 374 LYS LYS A . n A 1 31 PRO 31 375 375 PRO PRO A . n A 1 32 VAL 32 376 376 VAL VAL A . n A 1 33 ASP 33 377 377 ASP ASP A . n A 1 34 ALA 34 378 378 ALA ALA A . n A 1 35 SER 35 379 379 SER SER A . n A 1 36 ALA 36 380 380 ALA ALA A . n A 1 37 LEU 37 381 381 LEU LEU A . n A 1 38 GLY 38 382 382 GLY GLY A . n A 1 39 LEU 39 383 383 LEU LEU A . n A 1 40 HIS 40 384 384 HIS HIS A . n A 1 41 ASP 41 385 385 ASP ASP A . n A 1 42 TYR 42 386 386 TYR TYR A . n A 1 43 HIS 43 387 387 HIS HIS A . n A 1 44 ASP 44 388 388 ASP ASP A . n A 1 45 ILE 45 389 389 ILE ILE A . n A 1 46 ILE 46 390 390 ILE ILE A . n A 1 47 LYS 47 391 391 LYS LYS A . n A 1 48 HIS 48 392 392 HIS HIS A . n A 1 49 PRO 49 393 393 PRO PRO A . n A 1 50 MET 50 394 394 MET MET A . n A 1 51 ASP 51 395 395 ASP ASP A . n A 1 52 LEU 52 396 396 LEU LEU A . n A 1 53 SER 53 397 397 SER SER A . n A 1 54 THR 54 398 398 THR THR A . n A 1 55 VAL 55 399 399 VAL VAL A . n A 1 56 LYS 56 400 400 LYS LYS A . n A 1 57 ARG 57 401 401 ARG ARG A . n A 1 58 LYS 58 402 402 LYS LYS A . n A 1 59 MET 59 403 403 MET MET A . n A 1 60 GLU 60 404 404 GLU GLU A . n A 1 61 ASN 61 405 405 ASN ASN A . n A 1 62 ARG 62 406 406 ARG ARG A . n A 1 63 ASP 63 407 407 ASP ASP A . n A 1 64 TYR 64 408 408 TYR TYR A . n A 1 65 ARG 65 409 409 ARG ARG A . n A 1 66 ASP 66 410 410 ASP ASP A . n A 1 67 ALA 67 411 411 ALA ALA A . n A 1 68 GLN 68 412 412 GLN GLN A . n A 1 69 GLU 69 413 413 GLU GLU A . n A 1 70 PHE 70 414 414 PHE PHE A . n A 1 71 ALA 71 415 415 ALA ALA A . n A 1 72 ALA 72 416 416 ALA ALA A . n A 1 73 ASP 73 417 417 ASP ASP A . n A 1 74 VAL 74 418 418 VAL VAL A . n A 1 75 ARG 75 419 419 ARG ARG A . n A 1 76 LEU 76 420 420 LEU LEU A . n A 1 77 MET 77 421 421 MET MET A . n A 1 78 PHE 78 422 422 PHE PHE A . n A 1 79 SER 79 423 423 SER SER A . n A 1 80 ASN 80 424 424 ASN ASN A . n A 1 81 CYS 81 425 425 CYS CYS A . n A 1 82 TYR 82 426 426 TYR TYR A . n A 1 83 LYS 83 427 427 LYS LYS A . n A 1 84 TYR 84 428 428 TYR TYR A . n A 1 85 ASN 85 429 429 ASN ASN A . n A 1 86 PRO 86 430 430 PRO PRO A . n A 1 87 PRO 87 431 431 PRO PRO A . n A 1 88 ASP 88 432 432 ASP ASP A . n A 1 89 HIS 89 433 433 HIS HIS A . n A 1 90 ASP 90 434 434 ASP ASP A . n A 1 91 VAL 91 435 435 VAL VAL A . n A 1 92 VAL 92 436 436 VAL VAL A . n A 1 93 ALA 93 437 437 ALA ALA A . n A 1 94 MET 94 438 438 MET MET A . n A 1 95 ALA 95 439 439 ALA ALA A . n A 1 96 ARG 96 440 440 ARG ARG A . n A 1 97 LYS 97 441 441 LYS LYS A . n A 1 98 LEU 98 442 442 LEU LEU A . n A 1 99 GLN 99 443 443 GLN GLN A . n A 1 100 ASP 100 444 444 ASP ASP A . n A 1 101 VAL 101 445 445 VAL VAL A . n A 1 102 PHE 102 446 446 PHE PHE A . n A 1 103 GLU 103 447 447 GLU GLU A . n A 1 104 PHE 104 448 448 PHE PHE A . n A 1 105 ARG 105 449 449 ARG ARG A . n A 1 106 TYR 106 450 450 TYR TYR A . n A 1 107 ALA 107 451 451 ALA ALA A . n A 1 108 LYS 108 452 452 LYS LYS A . n A 1 109 MET 109 453 453 MET MET A . n A 1 110 PRO 110 454 454 PRO PRO A . n A 1 111 ASP 111 455 455 ASP ASP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 501 1 CL CL A . C 3 GOL 1 502 1 GOL GOL A . D 3 GOL 1 503 2 GOL GOL A . E 3 GOL 1 504 3 GOL GOL A . F 3 GOL 1 505 4 GOL GOL A . G 3 GOL 1 506 5 GOL GOL A . H 4 PGE 1 507 1 PGE PGE A . I 4 PGE 1 508 2 PGE PGE A . J 5 HOH 1 601 4 HOH HOH A . J 5 HOH 2 602 160 HOH HOH A . J 5 HOH 3 603 141 HOH HOH A . J 5 HOH 4 604 16 HOH HOH A . J 5 HOH 5 605 77 HOH HOH A . J 5 HOH 6 606 95 HOH HOH A . J 5 HOH 7 607 162 HOH HOH A . J 5 HOH 8 608 28 HOH HOH A . J 5 HOH 9 609 20 HOH HOH A . J 5 HOH 10 610 1 HOH HOH A . J 5 HOH 11 611 78 HOH HOH A . J 5 HOH 12 612 8 HOH HOH A . J 5 HOH 13 613 50 HOH HOH A . J 5 HOH 14 614 82 HOH HOH A . J 5 HOH 15 615 148 HOH HOH A . J 5 HOH 16 616 29 HOH HOH A . J 5 HOH 17 617 153 HOH HOH A . J 5 HOH 18 618 91 HOH HOH A . J 5 HOH 19 619 155 HOH HOH A . J 5 HOH 20 620 26 HOH HOH A . J 5 HOH 21 621 109 HOH HOH A . J 5 HOH 22 622 6 HOH HOH A . J 5 HOH 23 623 46 HOH HOH A . J 5 HOH 24 624 9 HOH HOH A . J 5 HOH 25 625 60 HOH HOH A . J 5 HOH 26 626 93 HOH HOH A . J 5 HOH 27 627 22 HOH HOH A . J 5 HOH 28 628 52 HOH HOH A . J 5 HOH 29 629 38 HOH HOH A . J 5 HOH 30 630 23 HOH HOH A . J 5 HOH 31 631 73 HOH HOH A . J 5 HOH 32 632 150 HOH HOH A . J 5 HOH 33 633 45 HOH HOH A . J 5 HOH 34 634 35 HOH HOH A . J 5 HOH 35 635 159 HOH HOH A . J 5 HOH 36 636 25 HOH HOH A . J 5 HOH 37 637 158 HOH HOH A . J 5 HOH 38 638 55 HOH HOH A . J 5 HOH 39 639 47 HOH HOH A . J 5 HOH 40 640 71 HOH HOH A . J 5 HOH 41 641 68 HOH HOH A . J 5 HOH 42 642 2 HOH HOH A . J 5 HOH 43 643 123 HOH HOH A . J 5 HOH 44 644 5 HOH HOH A . J 5 HOH 45 645 21 HOH HOH A . J 5 HOH 46 646 58 HOH HOH A . J 5 HOH 47 647 34 HOH HOH A . J 5 HOH 48 648 59 HOH HOH A . J 5 HOH 49 649 163 HOH HOH A . J 5 HOH 50 650 96 HOH HOH A . J 5 HOH 51 651 24 HOH HOH A . J 5 HOH 52 652 12 HOH HOH A . J 5 HOH 53 653 111 HOH HOH A . J 5 HOH 54 654 40 HOH HOH A . J 5 HOH 55 655 42 HOH HOH A . J 5 HOH 56 656 57 HOH HOH A . J 5 HOH 57 657 17 HOH HOH A . J 5 HOH 58 658 13 HOH HOH A . J 5 HOH 59 659 49 HOH HOH A . J 5 HOH 60 660 108 HOH HOH A . J 5 HOH 61 661 67 HOH HOH A . J 5 HOH 62 662 41 HOH HOH A . J 5 HOH 63 663 30 HOH HOH A . J 5 HOH 64 664 18 HOH HOH A . J 5 HOH 65 665 131 HOH HOH A . J 5 HOH 66 666 11 HOH HOH A . J 5 HOH 67 667 161 HOH HOH A . J 5 HOH 68 668 115 HOH HOH A . J 5 HOH 69 669 7 HOH HOH A . J 5 HOH 70 670 65 HOH HOH A . J 5 HOH 71 671 14 HOH HOH A . J 5 HOH 72 672 154 HOH HOH A . J 5 HOH 73 673 94 HOH HOH A . J 5 HOH 74 674 15 HOH HOH A . J 5 HOH 75 675 104 HOH HOH A . J 5 HOH 76 676 74 HOH HOH A . J 5 HOH 77 677 33 HOH HOH A . J 5 HOH 78 678 51 HOH HOH A . J 5 HOH 79 679 105 HOH HOH A . J 5 HOH 80 680 103 HOH HOH A . J 5 HOH 81 681 98 HOH HOH A . J 5 HOH 82 682 54 HOH HOH A . J 5 HOH 83 683 61 HOH HOH A . J 5 HOH 84 684 134 HOH HOH A . J 5 HOH 85 685 156 HOH HOH A . J 5 HOH 86 686 56 HOH HOH A . J 5 HOH 87 687 92 HOH HOH A . J 5 HOH 88 688 114 HOH HOH A . J 5 HOH 89 689 106 HOH HOH A . J 5 HOH 90 690 110 HOH HOH A . J 5 HOH 91 691 152 HOH HOH A . J 5 HOH 92 692 10 HOH HOH A . J 5 HOH 93 693 53 HOH HOH A . J 5 HOH 94 694 19 HOH HOH A . J 5 HOH 95 695 37 HOH HOH A . J 5 HOH 96 696 44 HOH HOH A . J 5 HOH 97 697 63 HOH HOH A . J 5 HOH 98 698 3 HOH HOH A . J 5 HOH 99 699 72 HOH HOH A . J 5 HOH 100 700 48 HOH HOH A . J 5 HOH 101 701 149 HOH HOH A . J 5 HOH 102 702 83 HOH HOH A . J 5 HOH 103 703 112 HOH HOH A . J 5 HOH 104 704 85 HOH HOH A . J 5 HOH 105 705 66 HOH HOH A . J 5 HOH 106 706 88 HOH HOH A . J 5 HOH 107 707 70 HOH HOH A . J 5 HOH 108 708 107 HOH HOH A . J 5 HOH 109 709 97 HOH HOH A . J 5 HOH 110 710 43 HOH HOH A . J 5 HOH 111 711 142 HOH HOH A . J 5 HOH 112 712 120 HOH HOH A . J 5 HOH 113 713 100 HOH HOH A . J 5 HOH 114 714 31 HOH HOH A . J 5 HOH 115 715 89 HOH HOH A . J 5 HOH 116 716 102 HOH HOH A . J 5 HOH 117 717 139 HOH HOH A . J 5 HOH 118 718 151 HOH HOH A . J 5 HOH 119 719 62 HOH HOH A . J 5 HOH 120 720 119 HOH HOH A . J 5 HOH 121 721 135 HOH HOH A . J 5 HOH 122 722 121 HOH HOH A . J 5 HOH 123 723 84 HOH HOH A . J 5 HOH 124 724 128 HOH HOH A . J 5 HOH 125 725 27 HOH HOH A . J 5 HOH 126 726 99 HOH HOH A . J 5 HOH 127 727 69 HOH HOH A . J 5 HOH 128 728 79 HOH HOH A . J 5 HOH 129 729 36 HOH HOH A . J 5 HOH 130 730 138 HOH HOH A . J 5 HOH 131 731 136 HOH HOH A . J 5 HOH 132 732 127 HOH HOH A . J 5 HOH 133 733 132 HOH HOH A . J 5 HOH 134 734 76 HOH HOH A . J 5 HOH 135 735 86 HOH HOH A . J 5 HOH 136 736 144 HOH HOH A . J 5 HOH 137 737 87 HOH HOH A . J 5 HOH 138 738 122 HOH HOH A . J 5 HOH 139 739 81 HOH HOH A . J 5 HOH 140 740 118 HOH HOH A . J 5 HOH 141 741 164 HOH HOH A . J 5 HOH 142 742 137 HOH HOH A . J 5 HOH 143 743 133 HOH HOH A . J 5 HOH 144 744 39 HOH HOH A . J 5 HOH 145 745 145 HOH HOH A . J 5 HOH 146 746 116 HOH HOH A . J 5 HOH 147 747 64 HOH HOH A . J 5 HOH 148 748 75 HOH HOH A . J 5 HOH 149 749 101 HOH HOH A . J 5 HOH 150 750 129 HOH HOH A . J 5 HOH 151 751 124 HOH HOH A . J 5 HOH 152 752 126 HOH HOH A . J 5 HOH 153 753 146 HOH HOH A . J 5 HOH 154 754 130 HOH HOH A . J 5 HOH 155 755 157 HOH HOH A . J 5 HOH 156 756 32 HOH HOH A . J 5 HOH 157 757 140 HOH HOH A . J 5 HOH 158 758 143 HOH HOH A . J 5 HOH 159 759 125 HOH HOH A . J 5 HOH 160 760 117 HOH HOH A . J 5 HOH 161 761 147 HOH HOH A . J 5 HOH 162 762 113 HOH HOH A . J 5 HOH 163 763 80 HOH HOH A . J 5 HOH 164 764 90 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1790 ? 1 MORE -5 ? 1 'SSA (A^2)' 6900 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id CL _pdbx_struct_special_symmetry.auth_seq_id 501 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id CL _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-06-22 2 'Structure model' 1 1 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.7.0029 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? 3.3.22 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.20 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? 7.1.0 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? Phaser_MR ? ? ? . 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 SG _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 CYS _pdbx_validate_close_contact.auth_seq_id_1 425 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 B _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 614 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.12 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 NE2 A GLN 412 ? B 1_555 O A HOH 763 ? ? 2_565 1.86 2 1 O A HOH 685 ? ? 1_555 O A HOH 685 ? ? 2_565 1.95 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 GOL C1 C N N 138 GOL O1 O N N 139 GOL C2 C N N 140 GOL O2 O N N 141 GOL C3 C N N 142 GOL O3 O N N 143 GOL H11 H N N 144 GOL H12 H N N 145 GOL HO1 H N N 146 GOL H2 H N N 147 GOL HO2 H N N 148 GOL H31 H N N 149 GOL H32 H N N 150 GOL HO3 H N N 151 HIS N N N N 152 HIS CA C N S 153 HIS C C N N 154 HIS O O N N 155 HIS CB C N N 156 HIS CG C Y N 157 HIS ND1 N Y N 158 HIS CD2 C Y N 159 HIS CE1 C Y N 160 HIS NE2 N Y N 161 HIS OXT O N N 162 HIS H H N N 163 HIS H2 H N N 164 HIS HA H N N 165 HIS HB2 H N N 166 HIS HB3 H N N 167 HIS HD1 H N N 168 HIS HD2 H N N 169 HIS HE1 H N N 170 HIS HE2 H N N 171 HIS HXT H N N 172 HOH O O N N 173 HOH H1 H N N 174 HOH H2 H N N 175 ILE N N N N 176 ILE CA C N S 177 ILE C C N N 178 ILE O O N N 179 ILE CB C N S 180 ILE CG1 C N N 181 ILE CG2 C N N 182 ILE CD1 C N N 183 ILE OXT O N N 184 ILE H H N N 185 ILE H2 H N N 186 ILE HA H N N 187 ILE HB H N N 188 ILE HG12 H N N 189 ILE HG13 H N N 190 ILE HG21 H N N 191 ILE HG22 H N N 192 ILE HG23 H N N 193 ILE HD11 H N N 194 ILE HD12 H N N 195 ILE HD13 H N N 196 ILE HXT H N N 197 LEU N N N N 198 LEU CA C N S 199 LEU C C N N 200 LEU O O N N 201 LEU CB C N N 202 LEU CG C N N 203 LEU CD1 C N N 204 LEU CD2 C N N 205 LEU OXT O N N 206 LEU H H N N 207 LEU H2 H N N 208 LEU HA H N N 209 LEU HB2 H N N 210 LEU HB3 H N N 211 LEU HG H N N 212 LEU HD11 H N N 213 LEU HD12 H N N 214 LEU HD13 H N N 215 LEU HD21 H N N 216 LEU HD22 H N N 217 LEU HD23 H N N 218 LEU HXT H N N 219 LYS N N N N 220 LYS CA C N S 221 LYS C C N N 222 LYS O O N N 223 LYS CB C N N 224 LYS CG C N N 225 LYS CD C N N 226 LYS CE C N N 227 LYS NZ N N N 228 LYS OXT O N N 229 LYS H H N N 230 LYS H2 H N N 231 LYS HA H N N 232 LYS HB2 H N N 233 LYS HB3 H N N 234 LYS HG2 H N N 235 LYS HG3 H N N 236 LYS HD2 H N N 237 LYS HD3 H N N 238 LYS HE2 H N N 239 LYS HE3 H N N 240 LYS HZ1 H N N 241 LYS HZ2 H N N 242 LYS HZ3 H N N 243 LYS HXT H N N 244 MET N N N N 245 MET CA C N S 246 MET C C N N 247 MET O O N N 248 MET CB C N N 249 MET CG C N N 250 MET SD S N N 251 MET CE C N N 252 MET OXT O N N 253 MET H H N N 254 MET H2 H N N 255 MET HA H N N 256 MET HB2 H N N 257 MET HB3 H N N 258 MET HG2 H N N 259 MET HG3 H N N 260 MET HE1 H N N 261 MET HE2 H N N 262 MET HE3 H N N 263 MET HXT H N N 264 PGE C1 C N N 265 PGE O1 O N N 266 PGE C2 C N N 267 PGE O2 O N N 268 PGE C3 C N N 269 PGE C4 C N N 270 PGE O4 O N N 271 PGE C6 C N N 272 PGE C5 C N N 273 PGE O3 O N N 274 PGE H1 H N N 275 PGE H12 H N N 276 PGE HO1 H N N 277 PGE H2 H N N 278 PGE H22 H N N 279 PGE H3 H N N 280 PGE H32 H N N 281 PGE H4 H N N 282 PGE H42 H N N 283 PGE HO4 H N N 284 PGE H6 H N N 285 PGE H62 H N N 286 PGE H5 H N N 287 PGE H52 H N N 288 PHE N N N N 289 PHE CA C N S 290 PHE C C N N 291 PHE O O N N 292 PHE CB C N N 293 PHE CG C Y N 294 PHE CD1 C Y N 295 PHE CD2 C Y N 296 PHE CE1 C Y N 297 PHE CE2 C Y N 298 PHE CZ C Y N 299 PHE OXT O N N 300 PHE H H N N 301 PHE H2 H N N 302 PHE HA H N N 303 PHE HB2 H N N 304 PHE HB3 H N N 305 PHE HD1 H N N 306 PHE HD2 H N N 307 PHE HE1 H N N 308 PHE HE2 H N N 309 PHE HZ H N N 310 PHE HXT H N N 311 PRO N N N N 312 PRO CA C N S 313 PRO C C N N 314 PRO O O N N 315 PRO CB C N N 316 PRO CG C N N 317 PRO CD C N N 318 PRO OXT O N N 319 PRO H H N N 320 PRO HA H N N 321 PRO HB2 H N N 322 PRO HB3 H N N 323 PRO HG2 H N N 324 PRO HG3 H N N 325 PRO HD2 H N N 326 PRO HD3 H N N 327 PRO HXT H N N 328 SER N N N N 329 SER CA C N S 330 SER C C N N 331 SER O O N N 332 SER CB C N N 333 SER OG O N N 334 SER OXT O N N 335 SER H H N N 336 SER H2 H N N 337 SER HA H N N 338 SER HB2 H N N 339 SER HB3 H N N 340 SER HG H N N 341 SER HXT H N N 342 THR N N N N 343 THR CA C N S 344 THR C C N N 345 THR O O N N 346 THR CB C N R 347 THR OG1 O N N 348 THR CG2 C N N 349 THR OXT O N N 350 THR H H N N 351 THR H2 H N N 352 THR HA H N N 353 THR HB H N N 354 THR HG1 H N N 355 THR HG21 H N N 356 THR HG22 H N N 357 THR HG23 H N N 358 THR HXT H N N 359 TRP N N N N 360 TRP CA C N S 361 TRP C C N N 362 TRP O O N N 363 TRP CB C N N 364 TRP CG C Y N 365 TRP CD1 C Y N 366 TRP CD2 C Y N 367 TRP NE1 N Y N 368 TRP CE2 C Y N 369 TRP CE3 C Y N 370 TRP CZ2 C Y N 371 TRP CZ3 C Y N 372 TRP CH2 C Y N 373 TRP OXT O N N 374 TRP H H N N 375 TRP H2 H N N 376 TRP HA H N N 377 TRP HB2 H N N 378 TRP HB3 H N N 379 TRP HD1 H N N 380 TRP HE1 H N N 381 TRP HE3 H N N 382 TRP HZ2 H N N 383 TRP HZ3 H N N 384 TRP HH2 H N N 385 TRP HXT H N N 386 TYR N N N N 387 TYR CA C N S 388 TYR C C N N 389 TYR O O N N 390 TYR CB C N N 391 TYR CG C Y N 392 TYR CD1 C Y N 393 TYR CD2 C Y N 394 TYR CE1 C Y N 395 TYR CE2 C Y N 396 TYR CZ C Y N 397 TYR OH O N N 398 TYR OXT O N N 399 TYR H H N N 400 TYR H2 H N N 401 TYR HA H N N 402 TYR HB2 H N N 403 TYR HB3 H N N 404 TYR HD1 H N N 405 TYR HD2 H N N 406 TYR HE1 H N N 407 TYR HE2 H N N 408 TYR HH H N N 409 TYR HXT H N N 410 VAL N N N N 411 VAL CA C N S 412 VAL C C N N 413 VAL O O N N 414 VAL CB C N N 415 VAL CG1 C N N 416 VAL CG2 C N N 417 VAL OXT O N N 418 VAL H H N N 419 VAL H2 H N N 420 VAL HA H N N 421 VAL HB H N N 422 VAL HG11 H N N 423 VAL HG12 H N N 424 VAL HG13 H N N 425 VAL HG21 H N N 426 VAL HG22 H N N 427 VAL HG23 H N N 428 VAL HXT H N N 429 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 PGE C1 O1 sing N N 250 PGE C1 C2 sing N N 251 PGE C1 H1 sing N N 252 PGE C1 H12 sing N N 253 PGE O1 HO1 sing N N 254 PGE C2 O2 sing N N 255 PGE C2 H2 sing N N 256 PGE C2 H22 sing N N 257 PGE O2 C3 sing N N 258 PGE C3 C4 sing N N 259 PGE C3 H3 sing N N 260 PGE C3 H32 sing N N 261 PGE C4 O3 sing N N 262 PGE C4 H4 sing N N 263 PGE C4 H42 sing N N 264 PGE O4 C6 sing N N 265 PGE O4 HO4 sing N N 266 PGE C6 C5 sing N N 267 PGE C6 H6 sing N N 268 PGE C6 H62 sing N N 269 PGE C5 O3 sing N N 270 PGE C5 H5 sing N N 271 PGE C5 H52 sing N N 272 PHE N CA sing N N 273 PHE N H sing N N 274 PHE N H2 sing N N 275 PHE CA C sing N N 276 PHE CA CB sing N N 277 PHE CA HA sing N N 278 PHE C O doub N N 279 PHE C OXT sing N N 280 PHE CB CG sing N N 281 PHE CB HB2 sing N N 282 PHE CB HB3 sing N N 283 PHE CG CD1 doub Y N 284 PHE CG CD2 sing Y N 285 PHE CD1 CE1 sing Y N 286 PHE CD1 HD1 sing N N 287 PHE CD2 CE2 doub Y N 288 PHE CD2 HD2 sing N N 289 PHE CE1 CZ doub Y N 290 PHE CE1 HE1 sing N N 291 PHE CE2 CZ sing Y N 292 PHE CE2 HE2 sing N N 293 PHE CZ HZ sing N N 294 PHE OXT HXT sing N N 295 PRO N CA sing N N 296 PRO N CD sing N N 297 PRO N H sing N N 298 PRO CA C sing N N 299 PRO CA CB sing N N 300 PRO CA HA sing N N 301 PRO C O doub N N 302 PRO C OXT sing N N 303 PRO CB CG sing N N 304 PRO CB HB2 sing N N 305 PRO CB HB3 sing N N 306 PRO CG CD sing N N 307 PRO CG HG2 sing N N 308 PRO CG HG3 sing N N 309 PRO CD HD2 sing N N 310 PRO CD HD3 sing N N 311 PRO OXT HXT sing N N 312 SER N CA sing N N 313 SER N H sing N N 314 SER N H2 sing N N 315 SER CA C sing N N 316 SER CA CB sing N N 317 SER CA HA sing N N 318 SER C O doub N N 319 SER C OXT sing N N 320 SER CB OG sing N N 321 SER CB HB2 sing N N 322 SER CB HB3 sing N N 323 SER OG HG sing N N 324 SER OXT HXT sing N N 325 THR N CA sing N N 326 THR N H sing N N 327 THR N H2 sing N N 328 THR CA C sing N N 329 THR CA CB sing N N 330 THR CA HA sing N N 331 THR C O doub N N 332 THR C OXT sing N N 333 THR CB OG1 sing N N 334 THR CB CG2 sing N N 335 THR CB HB sing N N 336 THR OG1 HG1 sing N N 337 THR CG2 HG21 sing N N 338 THR CG2 HG22 sing N N 339 THR CG2 HG23 sing N N 340 THR OXT HXT sing N N 341 TRP N CA sing N N 342 TRP N H sing N N 343 TRP N H2 sing N N 344 TRP CA C sing N N 345 TRP CA CB sing N N 346 TRP CA HA sing N N 347 TRP C O doub N N 348 TRP C OXT sing N N 349 TRP CB CG sing N N 350 TRP CB HB2 sing N N 351 TRP CB HB3 sing N N 352 TRP CG CD1 doub Y N 353 TRP CG CD2 sing Y N 354 TRP CD1 NE1 sing Y N 355 TRP CD1 HD1 sing N N 356 TRP CD2 CE2 doub Y N 357 TRP CD2 CE3 sing Y N 358 TRP NE1 CE2 sing Y N 359 TRP NE1 HE1 sing N N 360 TRP CE2 CZ2 sing Y N 361 TRP CE3 CZ3 doub Y N 362 TRP CE3 HE3 sing N N 363 TRP CZ2 CH2 doub Y N 364 TRP CZ2 HZ2 sing N N 365 TRP CZ3 CH2 sing Y N 366 TRP CZ3 HZ3 sing N N 367 TRP CH2 HH2 sing N N 368 TRP OXT HXT sing N N 369 TYR N CA sing N N 370 TYR N H sing N N 371 TYR N H2 sing N N 372 TYR CA C sing N N 373 TYR CA CB sing N N 374 TYR CA HA sing N N 375 TYR C O doub N N 376 TYR C OXT sing N N 377 TYR CB CG sing N N 378 TYR CB HB2 sing N N 379 TYR CB HB3 sing N N 380 TYR CG CD1 doub Y N 381 TYR CG CD2 sing Y N 382 TYR CD1 CE1 sing Y N 383 TYR CD1 HD1 sing N N 384 TYR CD2 CE2 doub Y N 385 TYR CD2 HD2 sing N N 386 TYR CE1 CZ doub Y N 387 TYR CE1 HE1 sing N N 388 TYR CE2 CZ sing Y N 389 TYR CE2 HE2 sing N N 390 TYR CZ OH sing N N 391 TYR OH HH sing N N 392 TYR OXT HXT sing N N 393 VAL N CA sing N N 394 VAL N H sing N N 395 VAL N H2 sing N N 396 VAL CA C sing N N 397 VAL CA CB sing N N 398 VAL CA HA sing N N 399 VAL C O doub N N 400 VAL C OXT sing N N 401 VAL CB CG1 sing N N 402 VAL CB CG2 sing N N 403 VAL CB HB sing N N 404 VAL CG1 HG11 sing N N 405 VAL CG1 HG12 sing N N 406 VAL CG1 HG13 sing N N 407 VAL CG2 HG21 sing N N 408 VAL CG2 HG22 sing N N 409 VAL CG2 HG23 sing N N 410 VAL OXT HXT sing N N 411 # _pdbx_audit_support.funding_organization DBT _pdbx_audit_support.country India _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 GLYCEROL GOL 4 'TRIETHYLENE GLYCOL' PGE 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2E3K _pdbx_initial_refinement_model.details ? #