data_5IBV # _entry.id 5IBV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.320 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5IBV WWPDB D_1000218447 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5IBV _pdbx_database_status.recvd_initial_deposition_date 2016-02-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tao, Y.J.' 1 'Toh, Y.S.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Virol. _citation.journal_id_ASTM JOVIAM _citation.journal_id_CSD 0825 _citation.journal_id_ISSN 1098-5514 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 90 _citation.language ? _citation.page_first 9008 _citation.page_last 9017 _citation.title 'Crystal Structure of the Human Astrovirus Capsid Protein.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1128/JVI.00694-16 _citation.pdbx_database_id_PubMed 27466429 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Toh, Y.' 1 ? primary 'Harper, J.' 2 ? primary 'Dryden, K.A.' 3 ? primary 'Yeager, M.' 4 ? primary 'Arias, C.F.' 5 ? primary 'Mendez, E.' 6 ? primary 'Tao, Y.J.' 7 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 91.45 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5IBV _cell.details ? _cell.formula_units_Z ? _cell.length_a 51.983 _cell.length_a_esd ? _cell.length_b 59.236 _cell.length_b_esd ? _cell.length_c 56.197 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IBV _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Capsid polyprotein VP90' 37772.746 1 ? ? 'unp residues 71-416' ? 2 water nat water 18.015 73 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;KQGVTGPKPAICQTATATLGTIGSNTTGATEIEACILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVRLTS (MSE)VGASAVNGTVVRISLNPTSTPSSTSWSGLGARKHLDVTVGKNAVFKLKPSDLGGPRDGWWLTNTNDNASDTLGPS IEIHTLGQT(MSE)SSYQNTQFTGGLFLVELSSAWCFTGYAANPNLVNLVKSTDKSVNVTFEGSAGTPLI(MSE)NVPEH SHFARTAVEHSSLSTSLSRAGGESSSDTVWQVLNTAVSAAELVTPPPFNWLVKGGWWFVKLIAGRARTGARRFYVYLSYQ DALSNKPALCTGGVPASARQSNPVRTTLQFTQ(MSE)NQPSLGHGGGGHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;KQGVTGPKPAICQTATATLGTIGSNTTGATEIEACILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVRLTSMVGA SAVNGTVVRISLNPTSTPSSTSWSGLGARKHLDVTVGKNAVFKLKPSDLGGPRDGWWLTNTNDNASDTLGPSIEIHTLGQ TMSSYQNTQFTGGLFLVELSSAWCFTGYAANPNLVNLVKSTDKSVNVTFEGSAGTPLIMNVPEHSHFARTAVEHSSLSTS LSRAGGESSSDTVWQVLNTAVSAAELVTPPPFNWLVKGGWWFVKLIAGRARTGARRFYVYLSYQDALSNKPALCTGGVPA SARQSNPVRTTLQFTQMNQPSLGHGGGGHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 GLN n 1 3 GLY n 1 4 VAL n 1 5 THR n 1 6 GLY n 1 7 PRO n 1 8 LYS n 1 9 PRO n 1 10 ALA n 1 11 ILE n 1 12 CYS n 1 13 GLN n 1 14 THR n 1 15 ALA n 1 16 THR n 1 17 ALA n 1 18 THR n 1 19 LEU n 1 20 GLY n 1 21 THR n 1 22 ILE n 1 23 GLY n 1 24 SER n 1 25 ASN n 1 26 THR n 1 27 THR n 1 28 GLY n 1 29 ALA n 1 30 THR n 1 31 GLU n 1 32 ILE n 1 33 GLU n 1 34 ALA n 1 35 CYS n 1 36 ILE n 1 37 LEU n 1 38 LEU n 1 39 ASN n 1 40 PRO n 1 41 VAL n 1 42 LEU n 1 43 VAL n 1 44 LYS n 1 45 ASP n 1 46 ALA n 1 47 THR n 1 48 GLY n 1 49 SER n 1 50 THR n 1 51 GLN n 1 52 PHE n 1 53 GLY n 1 54 PRO n 1 55 VAL n 1 56 GLN n 1 57 ALA n 1 58 LEU n 1 59 GLY n 1 60 ALA n 1 61 GLN n 1 62 TYR n 1 63 SER n 1 64 MET n 1 65 TRP n 1 66 LYS n 1 67 LEU n 1 68 LYS n 1 69 TYR n 1 70 LEU n 1 71 ASN n 1 72 VAL n 1 73 ARG n 1 74 LEU n 1 75 THR n 1 76 SER n 1 77 MSE n 1 78 VAL n 1 79 GLY n 1 80 ALA n 1 81 SER n 1 82 ALA n 1 83 VAL n 1 84 ASN n 1 85 GLY n 1 86 THR n 1 87 VAL n 1 88 VAL n 1 89 ARG n 1 90 ILE n 1 91 SER n 1 92 LEU n 1 93 ASN n 1 94 PRO n 1 95 THR n 1 96 SER n 1 97 THR n 1 98 PRO n 1 99 SER n 1 100 SER n 1 101 THR n 1 102 SER n 1 103 TRP n 1 104 SER n 1 105 GLY n 1 106 LEU n 1 107 GLY n 1 108 ALA n 1 109 ARG n 1 110 LYS n 1 111 HIS n 1 112 LEU n 1 113 ASP n 1 114 VAL n 1 115 THR n 1 116 VAL n 1 117 GLY n 1 118 LYS n 1 119 ASN n 1 120 ALA n 1 121 VAL n 1 122 PHE n 1 123 LYS n 1 124 LEU n 1 125 LYS n 1 126 PRO n 1 127 SER n 1 128 ASP n 1 129 LEU n 1 130 GLY n 1 131 GLY n 1 132 PRO n 1 133 ARG n 1 134 ASP n 1 135 GLY n 1 136 TRP n 1 137 TRP n 1 138 LEU n 1 139 THR n 1 140 ASN n 1 141 THR n 1 142 ASN n 1 143 ASP n 1 144 ASN n 1 145 ALA n 1 146 SER n 1 147 ASP n 1 148 THR n 1 149 LEU n 1 150 GLY n 1 151 PRO n 1 152 SER n 1 153 ILE n 1 154 GLU n 1 155 ILE n 1 156 HIS n 1 157 THR n 1 158 LEU n 1 159 GLY n 1 160 GLN n 1 161 THR n 1 162 MSE n 1 163 SER n 1 164 SER n 1 165 TYR n 1 166 GLN n 1 167 ASN n 1 168 THR n 1 169 GLN n 1 170 PHE n 1 171 THR n 1 172 GLY n 1 173 GLY n 1 174 LEU n 1 175 PHE n 1 176 LEU n 1 177 VAL n 1 178 GLU n 1 179 LEU n 1 180 SER n 1 181 SER n 1 182 ALA n 1 183 TRP n 1 184 CYS n 1 185 PHE n 1 186 THR n 1 187 GLY n 1 188 TYR n 1 189 ALA n 1 190 ALA n 1 191 ASN n 1 192 PRO n 1 193 ASN n 1 194 LEU n 1 195 VAL n 1 196 ASN n 1 197 LEU n 1 198 VAL n 1 199 LYS n 1 200 SER n 1 201 THR n 1 202 ASP n 1 203 LYS n 1 204 SER n 1 205 VAL n 1 206 ASN n 1 207 VAL n 1 208 THR n 1 209 PHE n 1 210 GLU n 1 211 GLY n 1 212 SER n 1 213 ALA n 1 214 GLY n 1 215 THR n 1 216 PRO n 1 217 LEU n 1 218 ILE n 1 219 MSE n 1 220 ASN n 1 221 VAL n 1 222 PRO n 1 223 GLU n 1 224 HIS n 1 225 SER n 1 226 HIS n 1 227 PHE n 1 228 ALA n 1 229 ARG n 1 230 THR n 1 231 ALA n 1 232 VAL n 1 233 GLU n 1 234 HIS n 1 235 SER n 1 236 SER n 1 237 LEU n 1 238 SER n 1 239 THR n 1 240 SER n 1 241 LEU n 1 242 SER n 1 243 ARG n 1 244 ALA n 1 245 GLY n 1 246 GLY n 1 247 GLU n 1 248 SER n 1 249 SER n 1 250 SER n 1 251 ASP n 1 252 THR n 1 253 VAL n 1 254 TRP n 1 255 GLN n 1 256 VAL n 1 257 LEU n 1 258 ASN n 1 259 THR n 1 260 ALA n 1 261 VAL n 1 262 SER n 1 263 ALA n 1 264 ALA n 1 265 GLU n 1 266 LEU n 1 267 VAL n 1 268 THR n 1 269 PRO n 1 270 PRO n 1 271 PRO n 1 272 PHE n 1 273 ASN n 1 274 TRP n 1 275 LEU n 1 276 VAL n 1 277 LYS n 1 278 GLY n 1 279 GLY n 1 280 TRP n 1 281 TRP n 1 282 PHE n 1 283 VAL n 1 284 LYS n 1 285 LEU n 1 286 ILE n 1 287 ALA n 1 288 GLY n 1 289 ARG n 1 290 ALA n 1 291 ARG n 1 292 THR n 1 293 GLY n 1 294 ALA n 1 295 ARG n 1 296 ARG n 1 297 PHE n 1 298 TYR n 1 299 VAL n 1 300 TYR n 1 301 LEU n 1 302 SER n 1 303 TYR n 1 304 GLN n 1 305 ASP n 1 306 ALA n 1 307 LEU n 1 308 SER n 1 309 ASN n 1 310 LYS n 1 311 PRO n 1 312 ALA n 1 313 LEU n 1 314 CYS n 1 315 THR n 1 316 GLY n 1 317 GLY n 1 318 VAL n 1 319 PRO n 1 320 ALA n 1 321 SER n 1 322 ALA n 1 323 ARG n 1 324 GLN n 1 325 SER n 1 326 ASN n 1 327 PRO n 1 328 VAL n 1 329 ARG n 1 330 THR n 1 331 THR n 1 332 LEU n 1 333 GLN n 1 334 PHE n 1 335 THR n 1 336 GLN n 1 337 MSE n 1 338 ASN n 1 339 GLN n 1 340 PRO n 1 341 SER n 1 342 LEU n 1 343 GLY n 1 344 HIS n 1 345 GLY n 1 346 GLY n 1 347 GLY n 1 348 GLY n 1 349 HIS n 1 350 HIS n 1 351 HIS n 1 352 HIS n 1 353 HIS n 1 354 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 354 _entity_src_gen.gene_src_common_name HAstV-8 _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ORF2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human astrovirus-8' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 43358 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type pET28 _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'HSstV-8 CP71-415' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CAPSD_HASV8 _struct_ref.pdbx_db_accession Q9IFX1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KQGVTGPKPAICQTATATLGTIGSNTTGATEIEACILLNPVLVKDATGSTQFGPVQALGAQYSMWKLKYLNVRLTSMVGA SAVNGTVVRISLNPTSTPSSTSWSGLGARKHLDVTVGKNAVFKLKPSDLGGPRDGWWLTNTNDNASDTLGPSIEIHTLGQ TMSSYQNTQFTGGLFLVELSSAWCFTGYAANPNLVNLVKSTDKSVNVTFEGSAGTPLIMNVPEHSHFARTAVEHSSLSTS LSRAGGESSSDTVWQVLNTAVSAAELVTPPPFNWLVKGGWWFVKLIAGRARTGARRFYVYLSYQDALSNKPALCTGGVPA SARQSNPVRTTLQFTQMNQPSLGHGA ; _struct_ref.pdbx_align_begin 71 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5IBV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 346 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9IFX1 _struct_ref_seq.db_align_beg 71 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 416 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 71 _struct_ref_seq.pdbx_auth_seq_align_end 416 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5IBV GLY A 346 ? UNP Q9IFX1 ALA 416 conflict 416 1 1 5IBV GLY A 347 ? UNP Q9IFX1 ? ? 'expression tag' 417 2 1 5IBV GLY A 348 ? UNP Q9IFX1 ? ? 'expression tag' 418 3 1 5IBV HIS A 349 ? UNP Q9IFX1 ? ? 'expression tag' 419 4 1 5IBV HIS A 350 ? UNP Q9IFX1 ? ? 'expression tag' 420 5 1 5IBV HIS A 351 ? UNP Q9IFX1 ? ? 'expression tag' 421 6 1 5IBV HIS A 352 ? UNP Q9IFX1 ? ? 'expression tag' 422 7 1 5IBV HIS A 353 ? UNP Q9IFX1 ? ? 'expression tag' 423 8 1 5IBV HIS A 354 ? UNP Q9IFX1 ? ? 'expression tag' 424 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5IBV _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.55 _exptl_crystal.description 'rod shape' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;VAPOR DIFFUSION, HANGING DROP, 0.2 M ammoium phosphate, 22% PEG 4000 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-11-03 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97856 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-D' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97856 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-D _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5IBV _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.15 _reflns.d_resolution_low 30 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 18278 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.0 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 17.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.706 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.15 _reflns_shell.d_res_low 2.23 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 97.8 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.507 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.2 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5IBV _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.15 _refine.ls_d_res_low 30 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 35248 _refine.ls_number_reflns_R_free 3573 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.55 _refine.ls_percent_reflns_R_free 10.14 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2132 _refine.ls_R_factor_R_free 0.2458 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2095 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details 0.05 _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 29.18 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.29 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2437 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 73 _refine_hist.number_atoms_total 2510 _refine_hist.d_res_high 2.15 _refine_hist.d_res_low 30 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 ? 2512 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.207 ? 3432 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 13.479 ? 1479 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.071 ? 402 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 434 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.1554 2.1837 . . 68 718 57.00 . . . 0.3283 . 0.3524 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1837 2.2136 . . 116 1187 95.00 . . . 0.3901 . 0.3518 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2136 2.2452 . . 141 1232 98.00 . . . 0.3853 . 0.3215 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2452 2.2787 . . 157 1214 98.00 . . . 0.3310 . 0.3080 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2787 2.3143 . . 125 1210 99.00 . . . 0.3086 . 0.2844 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3143 2.3523 . . 140 1289 99.00 . . . 0.3050 . 0.2841 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3523 2.3928 . . 136 1240 100.00 . . . 0.3156 . 0.2497 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3928 2.4363 . . 171 1214 100.00 . . . 0.3031 . 0.2545 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4363 2.4831 . . 129 1259 100.00 . . . 0.2821 . 0.2621 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4831 2.5338 . . 136 1249 100.00 . . . 0.2934 . 0.2294 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5338 2.5888 . . 142 1244 100.00 . . . 0.2914 . 0.2384 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5888 2.6490 . . 135 1237 100.00 . . . 0.2658 . 0.2239 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6490 2.7152 . . 154 1274 100.00 . . . 0.3143 . 0.2314 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7152 2.7886 . . 145 1210 100.00 . . . 0.3387 . 0.2091 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7886 2.8706 . . 129 1246 100.00 . . . 0.2131 . 0.2095 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8706 2.9632 . . 143 1249 100.00 . . . 0.2606 . 0.2074 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9632 3.0690 . . 144 1252 100.00 . . . 0.2652 . 0.2199 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0690 3.1917 . . 145 1231 99.00 . . . 0.2282 . 0.2054 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1917 3.3368 . . 114 1274 100.00 . . . 0.2528 . 0.1897 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.3368 3.5124 . . 146 1246 99.00 . . . 0.1959 . 0.1756 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5124 3.7321 . . 144 1259 100.00 . . . 0.2414 . 0.1842 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.7321 4.0196 . . 138 1221 99.00 . . . 0.1912 . 0.1875 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.0196 4.4229 . . 148 1221 99.00 . . . 0.1957 . 0.1640 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.4229 5.0602 . . 152 1226 98.00 . . . 0.1783 . 0.1518 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.0602 6.3649 . . 142 1235 99.00 . . . 0.2195 . 0.1903 . . . . . . . . . . 'X-RAY DIFFRACTION' 6.3649 29.6208 . . 133 1238 99.00 . . . 0.2408 . 0.2100 . . . . . . . . . . # _struct.entry_id 5IBV _struct.title 'Crystal Structure of Human Astrovirus capsid protein' _struct.pdbx_descriptor 'Capsid polyprotein VP90' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5IBV _struct_keywords.text 'Astrovirus, Capsid, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLN A 51 ? GLN A 61 ? GLN A 121 GLN A 131 1 ? 11 HELX_P HELX_P2 AA2 THR A 101 ? ARG A 109 ? THR A 171 ARG A 179 1 ? 9 HELX_P HELX_P3 AA3 LYS A 125 ? GLY A 130 ? LYS A 195 GLY A 200 1 ? 6 HELX_P HELX_P4 AA4 ASN A 144 ? THR A 148 ? ASN A 214 THR A 218 5 ? 5 HELX_P HELX_P5 AA5 SER A 225 ? SER A 235 ? SER A 295 SER A 305 1 ? 11 HELX_P HELX_P6 AA6 PHE A 272 ? GLY A 279 ? PHE A 342 GLY A 349 1 ? 8 HELX_P HELX_P7 AA7 SER A 302 ? SER A 308 ? SER A 372 SER A 378 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 12 SG ? ? ? 1_555 A CYS 184 SG ? ? A CYS 82 A CYS 254 1_555 ? ? ? ? ? ? ? 2.533 ? covale1 covale both ? A SER 76 C ? ? ? 1_555 A MSE 77 N A ? A SER 146 A MSE 147 1_555 ? ? ? ? ? ? ? 1.322 ? covale2 covale both ? A SER 76 C ? ? ? 1_555 A MSE 77 N B ? A SER 146 A MSE 147 1_555 ? ? ? ? ? ? ? 1.324 ? covale3 covale both ? A MSE 77 C A ? ? 1_555 A VAL 78 N ? ? A MSE 147 A VAL 148 1_555 ? ? ? ? ? ? ? 1.337 ? covale4 covale both ? A MSE 77 C B ? ? 1_555 A VAL 78 N ? ? A MSE 147 A VAL 148 1_555 ? ? ? ? ? ? ? 1.335 ? covale5 covale both ? A THR 161 C ? ? ? 1_555 A MSE 162 N A ? A THR 231 A MSE 232 1_555 ? ? ? ? ? ? ? 1.331 ? covale6 covale both ? A THR 161 C ? ? ? 1_555 A MSE 162 N B ? A THR 231 A MSE 232 1_555 ? ? ? ? ? ? ? 1.321 ? covale7 covale both ? A MSE 162 C A ? ? 1_555 A SER 163 N ? ? A MSE 232 A SER 233 1_555 ? ? ? ? ? ? ? 1.334 ? covale8 covale both ? A MSE 162 C B ? ? 1_555 A SER 163 N ? ? A MSE 232 A SER 233 1_555 ? ? ? ? ? ? ? 1.328 ? covale9 covale both ? A ILE 218 C ? ? ? 1_555 A MSE 219 N ? ? A ILE 288 A MSE 289 1_555 ? ? ? ? ? ? ? 1.330 ? covale10 covale both ? A MSE 219 C ? ? ? 1_555 A ASN 220 N ? ? A MSE 289 A ASN 290 1_555 ? ? ? ? ? ? ? 1.332 ? covale11 covale none ? A ARG 289 NH1 ? ? ? 1_555 A ARG 291 NH1 ? ? A ARG 359 A ARG 361 1_555 ? ? ? ? ? ? ? 1.463 ? covale12 covale both ? A GLN 336 C ? ? ? 1_555 A MSE 337 N ? ? A GLN 406 A MSE 407 1_555 ? ? ? ? ? ? ? 1.325 ? covale13 covale both ? A MSE 337 C ? ? ? 1_555 A ASN 338 N ? ? A MSE 407 A ASN 408 1_555 ? ? ? ? ? ? ? 1.326 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PRO 270 A . ? PRO 340 A PRO 271 A ? PRO 341 A 1 -5.08 2 ALA 290 A . ? ALA 360 A ARG 291 A ? ARG 361 A 1 -14.11 3 ARG 291 A . ? ARG 361 A THR 292 A ? THR 362 A 1 8.10 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? AA3 ? 4 ? AA4 ? 2 ? AA5 ? 7 ? AA6 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA5 5 6 ? anti-parallel AA5 6 7 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 11 ? GLY A 23 ? ILE A 81 GLY A 93 AA1 2 GLY A 173 ? TYR A 188 ? GLY A 243 TYR A 258 AA1 3 TYR A 62 ? SER A 76 ? TYR A 132 SER A 146 AA1 4 ALA A 120 ? LEU A 124 ? ALA A 190 LEU A 194 AA2 1 ILE A 11 ? GLY A 23 ? ILE A 81 GLY A 93 AA2 2 GLY A 173 ? TYR A 188 ? GLY A 243 TYR A 258 AA2 3 TYR A 62 ? SER A 76 ? TYR A 132 SER A 146 AA2 4 GLY A 131 ? LEU A 138 ? GLY A 201 LEU A 208 AA3 1 GLU A 31 ? LEU A 37 ? GLU A 101 LEU A 107 AA3 2 SER A 152 ? LEU A 158 ? SER A 222 LEU A 228 AA3 3 VAL A 87 ? ASN A 93 ? VAL A 157 ASN A 163 AA3 4 HIS A 111 ? THR A 115 ? HIS A 181 THR A 185 AA4 1 VAL A 83 ? ASN A 84 ? VAL A 153 ASN A 154 AA4 2 MSE A 162 ? SER A 163 ? MSE A 232 SER A 233 AA5 1 LYS A 199 ? VAL A 205 ? LYS A 269 VAL A 275 AA5 2 THR A 330 ? GLN A 336 ? THR A 400 GLN A 406 AA5 3 SER A 248 ? ASN A 258 ? SER A 318 ASN A 328 AA5 4 TRP A 280 ? ILE A 286 ? TRP A 350 ILE A 356 AA5 5 ARG A 295 ? TYR A 300 ? ARG A 365 TYR A 370 AA5 6 ILE A 218 ? VAL A 221 ? ILE A 288 VAL A 291 AA5 7 THR A 208 ? GLU A 210 ? THR A 278 GLU A 280 AA6 1 LYS A 199 ? VAL A 205 ? LYS A 269 VAL A 275 AA6 2 THR A 330 ? GLN A 336 ? THR A 400 GLN A 406 AA6 3 SER A 248 ? ASN A 258 ? SER A 318 ASN A 328 AA6 4 THR A 239 ? LEU A 241 ? THR A 309 LEU A 311 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 22 ? N ILE A 92 O LEU A 174 ? O LEU A 244 AA1 2 3 O CYS A 184 ? O CYS A 254 N LYS A 66 ? N LYS A 136 AA1 3 4 N VAL A 72 ? N VAL A 142 O PHE A 122 ? O PHE A 192 AA2 1 2 N ILE A 22 ? N ILE A 92 O LEU A 174 ? O LEU A 244 AA2 2 3 O CYS A 184 ? O CYS A 254 N LYS A 66 ? N LYS A 136 AA2 3 4 N TRP A 65 ? N TRP A 135 O TRP A 137 ? O TRP A 207 AA3 1 2 N ILE A 36 ? N ILE A 106 O ILE A 153 ? O ILE A 223 AA3 2 3 O SER A 152 ? O SER A 222 N ASN A 93 ? N ASN A 163 AA3 3 4 N ILE A 90 ? N ILE A 160 O LEU A 112 ? O LEU A 182 AA4 1 2 N ASN A 84 ? N ASN A 154 O MSE A 162 ? O MSE A 232 AA5 1 2 N ASP A 202 ? N ASP A 272 O LEU A 332 ? O LEU A 402 AA5 2 3 O GLN A 333 ? O GLN A 403 N LEU A 257 ? N LEU A 327 AA5 3 4 N VAL A 256 ? N VAL A 326 O TRP A 281 ? O TRP A 351 AA5 4 5 N ILE A 286 ? N ILE A 356 O ARG A 296 ? O ARG A 366 AA5 5 6 O PHE A 297 ? O PHE A 367 N MSE A 219 ? N MSE A 289 AA5 6 7 O ILE A 218 ? O ILE A 288 N GLU A 210 ? N GLU A 280 AA6 1 2 N ASP A 202 ? N ASP A 272 O LEU A 332 ? O LEU A 402 AA6 2 3 O GLN A 333 ? O GLN A 403 N LEU A 257 ? N LEU A 327 AA6 3 4 O SER A 249 ? O SER A 319 N SER A 240 ? N SER A 310 # _atom_sites.entry_id 5IBV _atom_sites.fract_transf_matrix[1][1] 0.019237 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000486 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016882 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017800 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 71 ? ? ? A . n A 1 2 GLN 2 72 ? ? ? A . n A 1 3 GLY 3 73 ? ? ? A . n A 1 4 VAL 4 74 ? ? ? A . n A 1 5 THR 5 75 ? ? ? A . n A 1 6 GLY 6 76 ? ? ? A . n A 1 7 PRO 7 77 77 PRO PRO A . n A 1 8 LYS 8 78 78 LYS LYS A . n A 1 9 PRO 9 79 79 PRO PRO A . n A 1 10 ALA 10 80 80 ALA ALA A . n A 1 11 ILE 11 81 81 ILE ILE A . n A 1 12 CYS 12 82 82 CYS CYS A . n A 1 13 GLN 13 83 83 GLN GLN A . n A 1 14 THR 14 84 84 THR THR A . n A 1 15 ALA 15 85 85 ALA ALA A . n A 1 16 THR 16 86 86 THR THR A . n A 1 17 ALA 17 87 87 ALA ALA A . n A 1 18 THR 18 88 88 THR THR A . n A 1 19 LEU 19 89 89 LEU LEU A . n A 1 20 GLY 20 90 90 GLY GLY A . n A 1 21 THR 21 91 91 THR THR A . n A 1 22 ILE 22 92 92 ILE ILE A . n A 1 23 GLY 23 93 93 GLY GLY A . n A 1 24 SER 24 94 94 SER SER A . n A 1 25 ASN 25 95 95 ASN ASN A . n A 1 26 THR 26 96 96 THR THR A . n A 1 27 THR 27 97 97 THR THR A . n A 1 28 GLY 28 98 98 GLY GLY A . n A 1 29 ALA 29 99 99 ALA ALA A . n A 1 30 THR 30 100 100 THR THR A . n A 1 31 GLU 31 101 101 GLU GLU A . n A 1 32 ILE 32 102 102 ILE ILE A . n A 1 33 GLU 33 103 103 GLU GLU A . n A 1 34 ALA 34 104 104 ALA ALA A . n A 1 35 CYS 35 105 105 CYS CYS A . n A 1 36 ILE 36 106 106 ILE ILE A . n A 1 37 LEU 37 107 107 LEU LEU A . n A 1 38 LEU 38 108 108 LEU LEU A . n A 1 39 ASN 39 109 109 ASN ASN A . n A 1 40 PRO 40 110 110 PRO PRO A . n A 1 41 VAL 41 111 111 VAL VAL A . n A 1 42 LEU 42 112 112 LEU LEU A . n A 1 43 VAL 43 113 113 VAL VAL A . n A 1 44 LYS 44 114 114 LYS LYS A . n A 1 45 ASP 45 115 115 ASP ASP A . n A 1 46 ALA 46 116 116 ALA ALA A . n A 1 47 THR 47 117 117 THR THR A . n A 1 48 GLY 48 118 118 GLY GLY A . n A 1 49 SER 49 119 119 SER SER A . n A 1 50 THR 50 120 120 THR THR A . n A 1 51 GLN 51 121 121 GLN GLN A . n A 1 52 PHE 52 122 122 PHE PHE A . n A 1 53 GLY 53 123 123 GLY GLY A . n A 1 54 PRO 54 124 124 PRO PRO A . n A 1 55 VAL 55 125 125 VAL VAL A . n A 1 56 GLN 56 126 126 GLN GLN A . n A 1 57 ALA 57 127 127 ALA ALA A . n A 1 58 LEU 58 128 128 LEU LEU A . n A 1 59 GLY 59 129 129 GLY GLY A . n A 1 60 ALA 60 130 130 ALA ALA A . n A 1 61 GLN 61 131 131 GLN GLN A . n A 1 62 TYR 62 132 132 TYR TYR A . n A 1 63 SER 63 133 133 SER SER A . n A 1 64 MET 64 134 134 MET MET A . n A 1 65 TRP 65 135 135 TRP TRP A . n A 1 66 LYS 66 136 136 LYS LYS A . n A 1 67 LEU 67 137 137 LEU LEU A . n A 1 68 LYS 68 138 138 LYS LYS A . n A 1 69 TYR 69 139 139 TYR TYR A . n A 1 70 LEU 70 140 140 LEU LEU A . n A 1 71 ASN 71 141 141 ASN ASN A . n A 1 72 VAL 72 142 142 VAL VAL A . n A 1 73 ARG 73 143 143 ARG ARG A . n A 1 74 LEU 74 144 144 LEU LEU A . n A 1 75 THR 75 145 145 THR THR A . n A 1 76 SER 76 146 146 SER SER A . n A 1 77 MSE 77 147 147 MSE MSE A . n A 1 78 VAL 78 148 148 VAL VAL A . n A 1 79 GLY 79 149 149 GLY GLY A . n A 1 80 ALA 80 150 150 ALA ALA A . n A 1 81 SER 81 151 151 SER SER A . n A 1 82 ALA 82 152 152 ALA ALA A . n A 1 83 VAL 83 153 153 VAL VAL A . n A 1 84 ASN 84 154 154 ASN ASN A . n A 1 85 GLY 85 155 155 GLY GLY A . n A 1 86 THR 86 156 156 THR THR A . n A 1 87 VAL 87 157 157 VAL VAL A . n A 1 88 VAL 88 158 158 VAL VAL A . n A 1 89 ARG 89 159 159 ARG ARG A . n A 1 90 ILE 90 160 160 ILE ILE A . n A 1 91 SER 91 161 161 SER SER A . n A 1 92 LEU 92 162 162 LEU LEU A . n A 1 93 ASN 93 163 163 ASN ASN A . n A 1 94 PRO 94 164 164 PRO PRO A . n A 1 95 THR 95 165 165 THR THR A . n A 1 96 SER 96 166 166 SER SER A . n A 1 97 THR 97 167 167 THR THR A . n A 1 98 PRO 98 168 168 PRO PRO A . n A 1 99 SER 99 169 169 SER SER A . n A 1 100 SER 100 170 170 SER SER A . n A 1 101 THR 101 171 171 THR THR A . n A 1 102 SER 102 172 172 SER SER A . n A 1 103 TRP 103 173 173 TRP TRP A . n A 1 104 SER 104 174 174 SER SER A . n A 1 105 GLY 105 175 175 GLY GLY A . n A 1 106 LEU 106 176 176 LEU LEU A . n A 1 107 GLY 107 177 177 GLY GLY A . n A 1 108 ALA 108 178 178 ALA ALA A . n A 1 109 ARG 109 179 179 ARG ARG A . n A 1 110 LYS 110 180 180 LYS LYS A . n A 1 111 HIS 111 181 181 HIS HIS A . n A 1 112 LEU 112 182 182 LEU LEU A . n A 1 113 ASP 113 183 183 ASP ASP A . n A 1 114 VAL 114 184 184 VAL VAL A . n A 1 115 THR 115 185 185 THR THR A . n A 1 116 VAL 116 186 186 VAL VAL A . n A 1 117 GLY 117 187 187 GLY GLY A . n A 1 118 LYS 118 188 188 LYS LYS A . n A 1 119 ASN 119 189 189 ASN ASN A . n A 1 120 ALA 120 190 190 ALA ALA A . n A 1 121 VAL 121 191 191 VAL VAL A . n A 1 122 PHE 122 192 192 PHE PHE A . n A 1 123 LYS 123 193 193 LYS LYS A . n A 1 124 LEU 124 194 194 LEU LEU A . n A 1 125 LYS 125 195 195 LYS LYS A . n A 1 126 PRO 126 196 196 PRO PRO A . n A 1 127 SER 127 197 197 SER SER A . n A 1 128 ASP 128 198 198 ASP ASP A . n A 1 129 LEU 129 199 199 LEU LEU A . n A 1 130 GLY 130 200 200 GLY GLY A . n A 1 131 GLY 131 201 201 GLY GLY A . n A 1 132 PRO 132 202 202 PRO PRO A . n A 1 133 ARG 133 203 203 ARG ARG A . n A 1 134 ASP 134 204 204 ASP ASP A . n A 1 135 GLY 135 205 205 GLY GLY A . n A 1 136 TRP 136 206 206 TRP TRP A . n A 1 137 TRP 137 207 207 TRP TRP A . n A 1 138 LEU 138 208 208 LEU LEU A . n A 1 139 THR 139 209 209 THR THR A . n A 1 140 ASN 140 210 210 ASN ASN A . n A 1 141 THR 141 211 211 THR THR A . n A 1 142 ASN 142 212 212 ASN ASN A . n A 1 143 ASP 143 213 213 ASP ASP A . n A 1 144 ASN 144 214 214 ASN ASN A . n A 1 145 ALA 145 215 215 ALA ALA A . n A 1 146 SER 146 216 216 SER SER A . n A 1 147 ASP 147 217 217 ASP ASP A . n A 1 148 THR 148 218 218 THR THR A . n A 1 149 LEU 149 219 219 LEU LEU A . n A 1 150 GLY 150 220 220 GLY GLY A . n A 1 151 PRO 151 221 221 PRO PRO A . n A 1 152 SER 152 222 222 SER SER A . n A 1 153 ILE 153 223 223 ILE ILE A . n A 1 154 GLU 154 224 224 GLU GLU A . n A 1 155 ILE 155 225 225 ILE ILE A . n A 1 156 HIS 156 226 226 HIS HIS A . n A 1 157 THR 157 227 227 THR THR A . n A 1 158 LEU 158 228 228 LEU LEU A . n A 1 159 GLY 159 229 229 GLY GLY A . n A 1 160 GLN 160 230 230 GLN GLN A . n A 1 161 THR 161 231 231 THR THR A . n A 1 162 MSE 162 232 232 MSE MSE A . n A 1 163 SER 163 233 233 SER SER A . n A 1 164 SER 164 234 234 SER SER A . n A 1 165 TYR 165 235 235 TYR TYR A . n A 1 166 GLN 166 236 236 GLN GLN A . n A 1 167 ASN 167 237 237 ASN ASN A . n A 1 168 THR 168 238 238 THR THR A . n A 1 169 GLN 169 239 239 GLN GLN A . n A 1 170 PHE 170 240 240 PHE PHE A . n A 1 171 THR 171 241 241 THR THR A . n A 1 172 GLY 172 242 242 GLY GLY A . n A 1 173 GLY 173 243 243 GLY GLY A . n A 1 174 LEU 174 244 244 LEU LEU A . n A 1 175 PHE 175 245 245 PHE PHE A . n A 1 176 LEU 176 246 246 LEU LEU A . n A 1 177 VAL 177 247 247 VAL VAL A . n A 1 178 GLU 178 248 248 GLU GLU A . n A 1 179 LEU 179 249 249 LEU LEU A . n A 1 180 SER 180 250 250 SER SER A . n A 1 181 SER 181 251 251 SER SER A . n A 1 182 ALA 182 252 252 ALA ALA A . n A 1 183 TRP 183 253 253 TRP TRP A . n A 1 184 CYS 184 254 254 CYS CYS A . n A 1 185 PHE 185 255 255 PHE PHE A . n A 1 186 THR 186 256 256 THR THR A . n A 1 187 GLY 187 257 257 GLY GLY A . n A 1 188 TYR 188 258 258 TYR TYR A . n A 1 189 ALA 189 259 259 ALA ALA A . n A 1 190 ALA 190 260 260 ALA ALA A . n A 1 191 ASN 191 261 261 ASN ASN A . n A 1 192 PRO 192 262 262 PRO PRO A . n A 1 193 ASN 193 263 263 ASN ASN A . n A 1 194 LEU 194 264 264 LEU LEU A . n A 1 195 VAL 195 265 265 VAL VAL A . n A 1 196 ASN 196 266 266 ASN ASN A . n A 1 197 LEU 197 267 267 LEU LEU A . n A 1 198 VAL 198 268 268 VAL VAL A . n A 1 199 LYS 199 269 269 LYS LYS A . n A 1 200 SER 200 270 270 SER SER A . n A 1 201 THR 201 271 271 THR THR A . n A 1 202 ASP 202 272 272 ASP ASP A . n A 1 203 LYS 203 273 273 LYS LYS A . n A 1 204 SER 204 274 274 SER SER A . n A 1 205 VAL 205 275 275 VAL VAL A . n A 1 206 ASN 206 276 276 ASN ASN A . n A 1 207 VAL 207 277 277 VAL VAL A . n A 1 208 THR 208 278 278 THR THR A . n A 1 209 PHE 209 279 279 PHE PHE A . n A 1 210 GLU 210 280 280 GLU GLU A . n A 1 211 GLY 211 281 281 GLY GLY A . n A 1 212 SER 212 282 282 SER SER A . n A 1 213 ALA 213 283 283 ALA ALA A . n A 1 214 GLY 214 284 284 GLY GLY A . n A 1 215 THR 215 285 285 THR THR A . n A 1 216 PRO 216 286 286 PRO PRO A . n A 1 217 LEU 217 287 287 LEU LEU A . n A 1 218 ILE 218 288 288 ILE ILE A . n A 1 219 MSE 219 289 289 MSE MSE A . n A 1 220 ASN 220 290 290 ASN ASN A . n A 1 221 VAL 221 291 291 VAL VAL A . n A 1 222 PRO 222 292 292 PRO PRO A . n A 1 223 GLU 223 293 293 GLU GLU A . n A 1 224 HIS 224 294 294 HIS HIS A . n A 1 225 SER 225 295 295 SER SER A . n A 1 226 HIS 226 296 296 HIS HIS A . n A 1 227 PHE 227 297 297 PHE PHE A . n A 1 228 ALA 228 298 298 ALA ALA A . n A 1 229 ARG 229 299 299 ARG ARG A . n A 1 230 THR 230 300 300 THR THR A . n A 1 231 ALA 231 301 301 ALA ALA A . n A 1 232 VAL 232 302 302 VAL VAL A . n A 1 233 GLU 233 303 303 GLU GLU A . n A 1 234 HIS 234 304 304 HIS HIS A . n A 1 235 SER 235 305 305 SER SER A . n A 1 236 SER 236 306 306 SER SER A . n A 1 237 LEU 237 307 307 LEU LEU A . n A 1 238 SER 238 308 308 SER SER A . n A 1 239 THR 239 309 309 THR THR A . n A 1 240 SER 240 310 310 SER SER A . n A 1 241 LEU 241 311 311 LEU LEU A . n A 1 242 SER 242 312 312 SER SER A . n A 1 243 ARG 243 313 313 ARG ARG A . n A 1 244 ALA 244 314 314 ALA ALA A . n A 1 245 GLY 245 315 315 GLY GLY A . n A 1 246 GLY 246 316 316 GLY GLY A . n A 1 247 GLU 247 317 317 GLU GLU A . n A 1 248 SER 248 318 318 SER SER A . n A 1 249 SER 249 319 319 SER SER A . n A 1 250 SER 250 320 320 SER SER A . n A 1 251 ASP 251 321 321 ASP ASP A . n A 1 252 THR 252 322 322 THR THR A . n A 1 253 VAL 253 323 323 VAL VAL A . n A 1 254 TRP 254 324 324 TRP TRP A . n A 1 255 GLN 255 325 325 GLN GLN A . n A 1 256 VAL 256 326 326 VAL VAL A . n A 1 257 LEU 257 327 327 LEU LEU A . n A 1 258 ASN 258 328 328 ASN ASN A . n A 1 259 THR 259 329 329 THR THR A . n A 1 260 ALA 260 330 330 ALA ALA A . n A 1 261 VAL 261 331 331 VAL VAL A . n A 1 262 SER 262 332 ? ? ? A . n A 1 263 ALA 263 333 ? ? ? A . n A 1 264 ALA 264 334 ? ? ? A . n A 1 265 GLU 265 335 335 GLU GLU A . n A 1 266 LEU 266 336 336 LEU LEU A . n A 1 267 VAL 267 337 337 VAL VAL A . n A 1 268 THR 268 338 338 THR THR A . n A 1 269 PRO 269 339 339 PRO PRO A . n A 1 270 PRO 270 340 340 PRO PRO A . n A 1 271 PRO 271 341 341 PRO PRO A . n A 1 272 PHE 272 342 342 PHE PHE A . n A 1 273 ASN 273 343 343 ASN ASN A . n A 1 274 TRP 274 344 344 TRP TRP A . n A 1 275 LEU 275 345 345 LEU LEU A . n A 1 276 VAL 276 346 346 VAL VAL A . n A 1 277 LYS 277 347 347 LYS LYS A . n A 1 278 GLY 278 348 348 GLY GLY A . n A 1 279 GLY 279 349 349 GLY GLY A . n A 1 280 TRP 280 350 350 TRP TRP A . n A 1 281 TRP 281 351 351 TRP TRP A . n A 1 282 PHE 282 352 352 PHE PHE A . n A 1 283 VAL 283 353 353 VAL VAL A . n A 1 284 LYS 284 354 354 LYS LYS A . n A 1 285 LEU 285 355 355 LEU LEU A . n A 1 286 ILE 286 356 356 ILE ILE A . n A 1 287 ALA 287 357 357 ALA ALA A . n A 1 288 GLY 288 358 358 GLY GLY A . n A 1 289 ARG 289 359 359 ARG ARG A . n A 1 290 ALA 290 360 360 ALA ALA A . n A 1 291 ARG 291 361 361 ARG ARG A . n A 1 292 THR 292 362 362 THR THR A . n A 1 293 GLY 293 363 363 GLY ALA A . n A 1 294 ALA 294 364 364 ALA ALA A . n A 1 295 ARG 295 365 365 ARG ARG A . n A 1 296 ARG 296 366 366 ARG ARG A . n A 1 297 PHE 297 367 367 PHE PHE A . n A 1 298 TYR 298 368 368 TYR TYR A . n A 1 299 VAL 299 369 369 VAL VAL A . n A 1 300 TYR 300 370 370 TYR TYR A . n A 1 301 LEU 301 371 371 LEU LEU A . n A 1 302 SER 302 372 372 SER SER A . n A 1 303 TYR 303 373 373 TYR TYR A . n A 1 304 GLN 304 374 374 GLN GLN A . n A 1 305 ASP 305 375 375 ASP ASP A . n A 1 306 ALA 306 376 376 ALA ALA A . n A 1 307 LEU 307 377 377 LEU LEU A . n A 1 308 SER 308 378 378 SER SER A . n A 1 309 ASN 309 379 379 ASN ASN A . n A 1 310 LYS 310 380 380 LYS LYS A . n A 1 311 PRO 311 381 381 PRO PRO A . n A 1 312 ALA 312 382 382 ALA ALA A . n A 1 313 LEU 313 383 383 LEU LEU A . n A 1 314 CYS 314 384 384 CYS CYS A . n A 1 315 THR 315 385 385 THR THR A . n A 1 316 GLY 316 386 386 GLY GLY A . n A 1 317 GLY 317 387 387 GLY GLY A . n A 1 318 VAL 318 388 388 VAL VAL A . n A 1 319 PRO 319 389 389 PRO PRO A . n A 1 320 ALA 320 390 ? ? ? A . n A 1 321 SER 321 391 ? ? ? A . n A 1 322 ALA 322 392 ? ? ? A . n A 1 323 ARG 323 393 ? ? ? A . n A 1 324 GLN 324 394 ? ? ? A . n A 1 325 SER 325 395 ? ? ? A . n A 1 326 ASN 326 396 ? ? ? A . n A 1 327 PRO 327 397 ? ? ? A . n A 1 328 VAL 328 398 ? ? ? A . n A 1 329 ARG 329 399 399 ARG ARG A . n A 1 330 THR 330 400 400 THR THR A . n A 1 331 THR 331 401 401 THR THR A . n A 1 332 LEU 332 402 402 LEU LEU A . n A 1 333 GLN 333 403 403 GLN GLN A . n A 1 334 PHE 334 404 404 PHE PHE A . n A 1 335 THR 335 405 405 THR THR A . n A 1 336 GLN 336 406 406 GLN GLN A . n A 1 337 MSE 337 407 407 MSE MSE A . n A 1 338 ASN 338 408 408 ASN ASN A . n A 1 339 GLN 339 409 409 GLN GLN A . n A 1 340 PRO 340 410 410 PRO PRO A . n A 1 341 SER 341 411 411 SER SER A . n A 1 342 LEU 342 412 412 LEU LEU A . n A 1 343 GLY 343 413 ? ? ? A . n A 1 344 HIS 344 414 ? ? ? A . n A 1 345 GLY 345 415 ? ? ? A . n A 1 346 GLY 346 416 ? ? ? A . n A 1 347 GLY 347 417 ? ? ? A . n A 1 348 GLY 348 418 ? ? ? A . n A 1 349 HIS 349 419 ? ? ? A . n A 1 350 HIS 350 420 ? ? ? A . n A 1 351 HIS 351 421 ? ? ? A . n A 1 352 HIS 352 422 ? ? ? A . n A 1 353 HIS 353 423 ? ? ? A . n A 1 354 HIS 354 424 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 501 39 HOH HOH A . B 2 HOH 2 502 36 HOH HOH A . B 2 HOH 3 503 26 HOH HOH A . B 2 HOH 4 504 56 HOH HOH A . B 2 HOH 5 505 59 HOH HOH A . B 2 HOH 6 506 18 HOH HOH A . B 2 HOH 7 507 76 HOH HOH A . B 2 HOH 8 508 22 HOH HOH A . B 2 HOH 9 509 8 HOH HOH A . B 2 HOH 10 510 24 HOH HOH A . B 2 HOH 11 511 25 HOH HOH A . B 2 HOH 12 512 38 HOH HOH A . B 2 HOH 13 513 9 HOH HOH A . B 2 HOH 14 514 27 HOH HOH A . B 2 HOH 15 515 50 HOH HOH A . B 2 HOH 16 516 29 HOH HOH A . B 2 HOH 17 517 51 HOH HOH A . B 2 HOH 18 518 54 HOH HOH A . B 2 HOH 19 519 70 HOH HOH A . B 2 HOH 20 520 64 HOH HOH A . B 2 HOH 21 521 47 HOH HOH A . B 2 HOH 22 522 57 HOH HOH A . B 2 HOH 23 523 12 HOH HOH A . B 2 HOH 24 524 53 HOH HOH A . B 2 HOH 25 525 55 HOH HOH A . B 2 HOH 26 526 52 HOH HOH A . B 2 HOH 27 527 3 HOH HOH A . B 2 HOH 28 528 49 HOH HOH A . B 2 HOH 29 529 28 HOH HOH A . B 2 HOH 30 530 16 HOH HOH A . B 2 HOH 31 531 79 HOH HOH A . B 2 HOH 32 532 5 HOH HOH A . B 2 HOH 33 533 37 HOH HOH A . B 2 HOH 34 534 4 HOH HOH A . B 2 HOH 35 535 21 HOH HOH A . B 2 HOH 36 536 6 HOH HOH A . B 2 HOH 37 537 7 HOH HOH A . B 2 HOH 38 538 20 HOH HOH A . B 2 HOH 39 539 75 HOH HOH A . B 2 HOH 40 540 40 HOH HOH A . B 2 HOH 41 541 11 HOH HOH A . B 2 HOH 42 542 10 HOH HOH A . B 2 HOH 43 543 15 HOH HOH A . B 2 HOH 44 544 2 HOH HOH A . B 2 HOH 45 545 63 HOH HOH A . B 2 HOH 46 546 33 HOH HOH A . B 2 HOH 47 547 19 HOH HOH A . B 2 HOH 48 548 81 HOH HOH A . B 2 HOH 49 549 13 HOH HOH A . B 2 HOH 50 550 80 HOH HOH A . B 2 HOH 51 551 23 HOH HOH A . B 2 HOH 52 552 48 HOH HOH A . B 2 HOH 53 553 17 HOH HOH A . B 2 HOH 54 554 32 HOH HOH A . B 2 HOH 55 555 1 HOH HOH A . B 2 HOH 56 556 68 HOH HOH A . B 2 HOH 57 557 41 HOH HOH A . B 2 HOH 58 558 43 HOH HOH A . B 2 HOH 59 559 46 HOH HOH A . B 2 HOH 60 560 30 HOH HOH A . B 2 HOH 61 561 42 HOH HOH A . B 2 HOH 62 562 60 HOH HOH A . B 2 HOH 63 563 62 HOH HOH A . B 2 HOH 64 564 61 HOH HOH A . B 2 HOH 65 565 69 HOH HOH A . B 2 HOH 66 566 65 HOH HOH A . B 2 HOH 67 567 35 HOH HOH A . B 2 HOH 68 568 78 HOH HOH A . B 2 HOH 69 569 45 HOH HOH A . B 2 HOH 70 570 31 HOH HOH A . B 2 HOH 71 571 72 HOH HOH A . B 2 HOH 72 572 71 HOH HOH A . B 2 HOH 73 573 82 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 77 A MSE 147 ? MET 'modified residue' 2 A MSE 162 A MSE 232 ? MET 'modified residue' 3 A MSE 219 A MSE 289 ? MET 'modified residue' 4 A MSE 337 A MSE 407 ? MET 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-08-03 2 'Structure model' 1 1 2016-08-10 3 'Structure model' 1 2 2016-10-12 4 'Structure model' 1 3 2017-09-20 5 'Structure model' 1 4 2019-12-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Author supporting evidence' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' pdbx_audit_support 3 4 'Structure model' pdbx_struct_oper_list 4 4 'Structure model' software 5 5 'Structure model' pdbx_audit_support # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_id_CSD' 2 4 'Structure model' '_pdbx_audit_support.funding_organization' 3 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 4 'Structure model' '_software.classification' 5 4 'Structure model' '_software.name' 6 5 'Structure model' '_pdbx_audit_support.funding_organization' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.10_2155: ???)' 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASES ? ? ? . 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CD2 A LEU 412 ? ? O A HOH 507 ? ? 2.00 2 1 O A PRO 79 ? ? O A HOH 501 ? ? 2.13 3 1 OG A SER 310 ? ? O A HOH 502 ? ? 2.14 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 148 ? ? -171.25 126.07 2 1 SER A 172 ? ? 52.43 -143.41 3 1 ASN A 263 ? ? 86.11 -22.33 4 1 ARG A 313 ? ? 59.79 -132.91 5 1 PRO A 339 ? ? -49.72 151.12 6 1 PRO A 341 ? ? -92.91 31.41 7 1 ARG A 361 ? ? 96.50 128.67 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 LEU A 264 ? ? VAL A 265 ? ? -122.11 2 1 SER A 312 ? ? ARG A 313 ? ? 138.50 3 1 GLY A 315 ? ? GLY A 316 ? ? -113.67 4 1 ARG A 359 ? ? ALA A 360 ? ? -64.68 5 1 THR A 362 ? ? GLY A 363 ? ? -138.04 6 1 GLY A 363 ? ? ALA A 364 ? ? -131.98 7 1 MSE A 407 ? ? ASN A 408 ? ? -146.78 8 1 PRO A 410 ? ? SER A 411 ? ? 106.82 9 1 SER A 411 ? ? LEU A 412 ? ? -120.20 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 71 ? A LYS 1 2 1 Y 1 A GLN 72 ? A GLN 2 3 1 Y 1 A GLY 73 ? A GLY 3 4 1 Y 1 A VAL 74 ? A VAL 4 5 1 Y 1 A THR 75 ? A THR 5 6 1 Y 1 A GLY 76 ? A GLY 6 7 1 Y 1 A SER 332 ? A SER 262 8 1 Y 1 A ALA 333 ? A ALA 263 9 1 Y 1 A ALA 334 ? A ALA 264 10 1 Y 1 A ALA 390 ? A ALA 320 11 1 Y 1 A SER 391 ? A SER 321 12 1 Y 1 A ALA 392 ? A ALA 322 13 1 Y 1 A ARG 393 ? A ARG 323 14 1 Y 1 A GLN 394 ? A GLN 324 15 1 Y 1 A SER 395 ? A SER 325 16 1 Y 1 A ASN 396 ? A ASN 326 17 1 Y 1 A PRO 397 ? A PRO 327 18 1 Y 1 A VAL 398 ? A VAL 328 19 1 Y 1 A GLY 413 ? A GLY 343 20 1 Y 1 A HIS 414 ? A HIS 344 21 1 Y 1 A GLY 415 ? A GLY 345 22 1 Y 1 A GLY 416 ? A GLY 346 23 1 Y 1 A GLY 417 ? A GLY 347 24 1 Y 1 A GLY 418 ? A GLY 348 25 1 Y 1 A HIS 419 ? A HIS 349 26 1 Y 1 A HIS 420 ? A HIS 350 27 1 Y 1 A HIS 421 ? A HIS 351 28 1 Y 1 A HIS 422 ? A HIS 352 29 1 Y 1 A HIS 423 ? A HIS 353 30 1 Y 1 A HIS 424 ? A HIS 354 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' AI103777 1 'Welch Foundation' 'United States' C-1565 2 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #