data_5IEM # _entry.id 5IEM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5IEM pdb_00005iem 10.2210/pdb5iem/pdb WWPDB D_1000218616 ? ? BMRB 30026 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details . _pdbx_database_related.db_id 30026 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5IEM _pdbx_database_status.recvd_initial_deposition_date 2016-02-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bourbigot, S.' 1 ? 'Dock-Bregeon, A.C.' 2 ? 'Coutant, J.' 3 ? 'Kieffer, B.' 4 ? 'Lebars, I.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev RNA _citation.journal_id_ASTM RNARFU _citation.journal_id_CSD 2122 _citation.journal_id_ISSN 1469-9001 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 22 _citation.language ? _citation.page_first 1844 _citation.page_last 1858 _citation.title ;Solution structure of the 5'-terminal hairpin of the 7SK small nuclear RNA. ; _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1261/rna.056523.116 _citation.pdbx_database_id_PubMed 27852926 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bourbigot, S.' 1 ? primary 'Dock-Bregeon, A.C.' 2 ? primary 'Eberling, P.' 3 ? primary 'Coutant, J.' 4 ? primary 'Kieffer, B.' 5 ? primary 'Lebars, I.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description '7SK snRNA' _entity.formula_weight 18268.777 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details RNA # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGGAUCUGUCACCCCAUUGAUCGCCUUCGGGCUGAUCUGGCUGGCUAGGCGGGUCCC _entity_poly.pdbx_seq_one_letter_code_can GGGAUCUGUCACCCCAUUGAUCGCCUUCGGGCUGAUCUGGCUGGCUAGGCGGGUCCC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 G n 1 4 A n 1 5 U n 1 6 C n 1 7 U n 1 8 G n 1 9 U n 1 10 C n 1 11 A n 1 12 C n 1 13 C n 1 14 C n 1 15 C n 1 16 A n 1 17 U n 1 18 U n 1 19 G n 1 20 A n 1 21 U n 1 22 C n 1 23 G n 1 24 C n 1 25 C n 1 26 U n 1 27 U n 1 28 C n 1 29 G n 1 30 G n 1 31 G n 1 32 C n 1 33 U n 1 34 G n 1 35 A n 1 36 U n 1 37 C n 1 38 U n 1 39 G n 1 40 G n 1 41 C n 1 42 U n 1 43 G n 1 44 G n 1 45 C n 1 46 U n 1 47 A n 1 48 G n 1 49 G n 1 50 C n 1 51 G n 1 52 G n 1 53 G n 1 54 U n 1 55 C n 1 56 C n 1 57 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 57 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5IEM _struct_ref.pdbx_db_accession 5IEM _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5IEM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 57 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5IEM _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 57 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 57 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H NOESY' 2 isotropic 2 1 1 '2D 1H-15N HSQC' 2 isotropic 3 2 2 '2D 1H-1H NOESY' 2 isotropic 4 2 2 '2D 1H-13C HSQC' 2 isotropic 5 3 3 '2D 1H-13C HSQC' 2 anisotropic 6 2 2 '2D 1H-1H TOCSY' 3 isotropic 7 2 2 '2D DQF-COSY' 2 isotropic 8 2 2 '3D HCCH-TOCSY' 2 isotropic 9 3 3 '2D 1H-15N HSQC' 2 anisotropic 10 2 2 '3D HCP' 1 isotropic 11 2 2 '2D HPCOSY' 1 isotropic 12 2 2 '2D HCN' 2 isotropic # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 1 288 Pa ambient 6.4 50 'sodium phosphate buffer' ? mM conditions_1 ? pH ? ? K 2 303 Pa ambient 6.4 50 'sodium phosphate buffer' ? mM conditions_2 ? pH ? ? K 3 303 Pa ambient 6.4 50 'sodium phosphate buffer' ? mM conditions_3 ? pH ? ? K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '0.4 mM [U-99% 13C; U-99% 15N] HPI, 90% H2O/10% D2O' '90% H2O/10% D2O' HPI solution ? 2 '0.4 mM [U-99% 13C; U-99% 15N] HPI, 100% D2O' '100% D2O' HPI solution ? 3 '0.4 mM [U-99% 13C; U-99% 15N] HPI, 90% H2O/10% D2O' '90% H2O/10% D2O' HPI 'filamentous virus' ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 'AVANCE III' ? Bruker 500 ? 2 'AVANCE III' ? Bruker 700 ? 3 DRX ? Bruker 600 ? # _pdbx_nmr_refine.entry_id 5IEM _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 5IEM _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations,lowest energy' # _pdbx_nmr_representative.entry_id 5IEM _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'fewest violations,lowest energy' # _pdbx_nmr_software.name CNS _pdbx_nmr_software.version ? _pdbx_nmr_software.classification refinement _pdbx_nmr_software.authors 'Brunger A. T. et.al.' _pdbx_nmr_software.ordinal 1 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5IEM _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5IEM _struct.title ;NMR structure of the 5'-terminal hairpin of the 7SK snRNA ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5IEM _struct_keywords.text 'RNA, regulator, transcription' _struct_keywords.pdbx_keywords TRANSCRIPTION # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 57 N3 ? ? A G 1 A C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 57 O2 ? ? A G 1 A C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 57 N4 ? ? A G 1 A C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 56 N3 ? ? A G 2 A C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 56 O2 ? ? A G 2 A C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 56 N4 ? ? A G 2 A C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 3 N1 ? ? ? 1_555 A C 55 N3 ? ? A G 3 A C 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 3 N2 ? ? ? 1_555 A C 55 O2 ? ? A G 3 A C 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 3 O6 ? ? ? 1_555 A C 55 N4 ? ? A G 3 A C 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A A 4 N1 ? ? ? 1_555 A U 54 N3 ? ? A A 4 A U 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A A 4 N6 ? ? ? 1_555 A U 54 O4 ? ? A A 4 A U 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A U 5 N3 ? ? ? 1_555 A G 53 O6 ? ? A U 5 A G 53 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog13 hydrog ? ? A U 5 O2 ? ? ? 1_555 A G 53 N1 ? ? A U 5 A G 53 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog14 hydrog ? ? A C 6 N3 ? ? ? 1_555 A G 52 N1 ? ? A C 6 A G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 6 N4 ? ? ? 1_555 A G 52 O6 ? ? A C 6 A G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A C 6 O2 ? ? ? 1_555 A G 52 N2 ? ? A C 6 A G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A U 7 N3 ? ? ? 1_555 A G 51 O6 ? ? A U 7 A G 51 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog18 hydrog ? ? A U 7 O2 ? ? ? 1_555 A G 51 N1 ? ? A U 7 A G 51 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog19 hydrog ? ? A G 8 N1 ? ? ? 1_555 A C 50 N3 ? ? A G 8 A C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 50 O2 ? ? A G 8 A C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 8 O6 ? ? ? 1_555 A C 50 N4 ? ? A G 8 A C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A U 9 N3 ? ? ? 1_555 A G 49 O6 ? ? A U 9 A G 49 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog23 hydrog ? ? A U 9 O2 ? ? ? 1_555 A G 49 N1 ? ? A U 9 A G 49 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog24 hydrog ? ? A C 10 N4 ? ? ? 1_555 A C 45 O2 ? ? A C 10 A C 45 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog25 hydrog ? ? A C 10 N3 ? ? ? 1_555 A G 48 N1 ? ? A C 10 A G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 10 N4 ? ? ? 1_555 A G 48 O6 ? ? A C 10 A G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 10 O2 ? ? ? 1_555 A G 48 N2 ? ? A C 10 A G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A A 11 N1 ? ? ? 1_555 A A 47 N6 ? ? A A 11 A A 47 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog29 hydrog ? ? A C 12 N3 ? ? ? 1_555 A G 44 N1 ? ? A C 12 A G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A C 12 N4 ? ? ? 1_555 A G 44 O6 ? ? A C 12 A G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 44 N2 ? ? A C 12 A G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 43 N1 ? ? A C 13 A G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 43 O6 ? ? A C 13 A G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 43 N2 ? ? A C 13 A G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A C 14 N3 ? ? ? 1_555 A G 40 N1 ? ? A C 14 A G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A C 14 N4 ? ? ? 1_555 A G 40 O6 ? ? A C 14 A G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A C 14 O2 ? ? ? 1_555 A G 40 N2 ? ? A C 14 A G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A C 15 N3 ? ? ? 1_555 A G 39 N1 ? ? A C 15 A G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 15 N4 ? ? ? 1_555 A G 39 O6 ? ? A C 15 A G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 15 O2 ? ? ? 1_555 A G 39 N2 ? ? A C 15 A G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A A 16 N6 ? ? ? 1_555 A U 38 O4 ? ? A A 16 A U 38 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog42 hydrog ? ? A U 17 O4 ? ? ? 1_555 A U 38 N3 ? ? A U 17 A U 38 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog43 hydrog ? ? A U 18 O2 ? ? ? 1_555 A A 20 N6 ? ? A U 18 A A 20 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog44 hydrog ? ? A U 18 N3 ? ? ? 1_555 A U 36 O4 ? ? A U 18 A U 36 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog45 hydrog ? ? A G 19 N1 ? ? ? 1_555 A C 37 N3 ? ? A G 19 A C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A G 19 N2 ? ? ? 1_555 A C 37 O2 ? ? A G 19 A C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 19 O6 ? ? ? 1_555 A C 37 N4 ? ? A G 19 A C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A A 20 N1 ? ? ? 1_555 A U 36 N3 ? ? A A 20 A U 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A A 20 N6 ? ? ? 1_555 A U 36 O4 ? ? A A 20 A U 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A U 21 N3 ? ? ? 1_555 A A 35 N1 ? ? A U 21 A A 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A U 21 O4 ? ? ? 1_555 A A 35 N6 ? ? A U 21 A A 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A C 22 N3 ? ? ? 1_555 A G 34 N1 ? ? A C 22 A G 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A C 22 N4 ? ? ? 1_555 A G 34 O6 ? ? A C 22 A G 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A C 22 O2 ? ? ? 1_555 A G 34 N2 ? ? A C 22 A G 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 23 N1 ? ? ? 1_555 A C 32 N3 ? ? A G 23 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 23 N2 ? ? ? 1_555 A C 32 O2 ? ? A G 23 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 23 O6 ? ? ? 1_555 A C 32 N4 ? ? A G 23 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A C 24 N3 ? ? ? 1_555 A G 31 N1 ? ? A C 24 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A C 24 N4 ? ? ? 1_555 A G 31 O6 ? ? A C 24 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A C 24 O2 ? ? ? 1_555 A G 31 N2 ? ? A C 24 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A C 25 N3 ? ? ? 1_555 A G 30 N1 ? ? A C 25 A G 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A C 25 N4 ? ? ? 1_555 A G 30 O6 ? ? A C 25 A G 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A C 25 O2 ? ? ? 1_555 A G 30 N2 ? ? A C 25 A G 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A U 26 O2 ? ? ? 1_555 A G 29 N1 ? ? A U 26 A G 29 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 5IEM _atom_sites.fract_transf_matrix[1][1] 0.001000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.001000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.001000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G GUA A . n A 1 2 G 2 2 2 G GUA A . n A 1 3 G 3 3 3 G GUA A . n A 1 4 A 4 4 4 A ADE A . n A 1 5 U 5 5 5 U URI A . n A 1 6 C 6 6 6 C CYT A . n A 1 7 U 7 7 7 U URI A . n A 1 8 G 8 8 8 G GUA A . n A 1 9 U 9 9 9 U URI A . n A 1 10 C 10 10 10 C CYT A . n A 1 11 A 11 11 11 A ADE A . n A 1 12 C 12 12 12 C CYT A . n A 1 13 C 13 13 13 C CYT A . n A 1 14 C 14 14 14 C CYT A . n A 1 15 C 15 15 15 C CYT A . n A 1 16 A 16 16 16 A ADE A . n A 1 17 U 17 17 17 U URI A . n A 1 18 U 18 18 18 U URI A . n A 1 19 G 19 19 19 G GUA A . n A 1 20 A 20 20 20 A ADE A . n A 1 21 U 21 21 21 U URI A . n A 1 22 C 22 22 22 C CYT A . n A 1 23 G 23 23 23 G GUA A . n A 1 24 C 24 24 24 C CYT A . n A 1 25 C 25 25 25 C CYT A . n A 1 26 U 26 26 26 U URI A . n A 1 27 U 27 27 27 U URI A . n A 1 28 C 28 28 28 C CYT A . n A 1 29 G 29 29 29 G GUA A . n A 1 30 G 30 30 30 G GUA A . n A 1 31 G 31 31 31 G GUA A . n A 1 32 C 32 32 32 C CYT A . n A 1 33 U 33 33 33 U URI A . n A 1 34 G 34 34 34 G GUA A . n A 1 35 A 35 35 35 A ADE A . n A 1 36 U 36 36 36 U URI A . n A 1 37 C 37 37 37 C CYT A . n A 1 38 U 38 38 38 U URI A . n A 1 39 G 39 39 39 G GUA A . n A 1 40 G 40 40 40 G GUA A . n A 1 41 C 41 41 41 C CYT A . n A 1 42 U 42 42 42 U URI A . n A 1 43 G 43 43 43 G GUA A . n A 1 44 G 44 44 44 G GUA A . n A 1 45 C 45 45 45 C CYT A . n A 1 46 U 46 46 46 U URI A . n A 1 47 A 47 47 47 A ADE A . n A 1 48 G 48 48 48 G GUA A . n A 1 49 G 49 49 49 G GUA A . n A 1 50 C 50 50 50 C CYT A . n A 1 51 G 51 51 51 G GUA A . n A 1 52 G 52 52 52 G GUA A . n A 1 53 G 53 53 53 G GUA A . n A 1 54 U 54 54 54 U URI A . n A 1 55 C 55 55 55 C CYT A . n A 1 56 C 56 56 56 C CYT A . n A 1 57 C 57 57 57 C CYT A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 11090 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-11-02 2 'Structure model' 1 1 2016-11-30 3 'Structure model' 1 2 2017-08-30 4 'Structure model' 1 3 2018-04-18 5 'Structure model' 1 4 2018-06-06 6 'Structure model' 1 5 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Structure summary' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Refinement description' 9 5 'Structure model' 'Source and taxonomy' 10 6 'Structure model' 'Data collection' 11 6 'Structure model' 'Database references' 12 6 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_audit_support 2 3 'Structure model' struct_conn 3 4 'Structure model' citation 4 4 'Structure model' entity 5 5 'Structure model' pdbx_entity_src_syn 6 5 'Structure model' pdbx_nmr_ensemble 7 5 'Structure model' pdbx_nmr_refine 8 5 'Structure model' pdbx_nmr_representative 9 6 'Structure model' database_2 10 6 'Structure model' pdbx_database_status 11 6 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_audit_support.funding_organization' 2 4 'Structure model' '_citation.journal_abbrev' 3 4 'Structure model' '_entity.pdbx_description' 4 5 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 5 5 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 6 5 'Structure model' '_pdbx_nmr_ensemble.conformer_selection_criteria' 7 5 'Structure model' '_pdbx_nmr_ensemble.conformers_calculated_total_number' 8 6 'Structure model' '_database_2.pdbx_DOI' 9 6 'Structure model' '_database_2.pdbx_database_accession' 10 6 'Structure model' '_pdbx_database_status.status_code_nmr_data' 11 6 'Structure model' '_pdbx_nmr_spectrometer.model' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 HPI 0.4 ? mM '[U-99% 13C; U-99% 15N]' 2 HPI 0.4 ? mM '[U-99% 13C; U-99% 15N]' 3 HPI 0.4 ? mM '[U-99% 13C; U-99% 15N]' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 3 "HO2'" A U 18 ? ? H61 A A 20 ? ? 1.32 2 4 "HO2'" A U 18 ? ? H61 A A 20 ? ? 1.19 3 5 "HO2'" A U 18 ? ? H61 A A 20 ? ? 1.22 4 7 "HO2'" A U 18 ? ? H61 A A 20 ? ? 1.28 5 9 "HO2'" A U 18 ? ? H61 A A 20 ? ? 1.14 6 10 "HO2'" A U 18 ? ? H61 A A 20 ? ? 1.12 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5IEM 'double helix' 5IEM 'a-form double helix' 5IEM 'parallel strands' 5IEM tetraloop 5IEM 'bulge loop' 5IEM 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 57 1_555 -0.370 -0.127 -0.037 0.191 -1.309 -2.254 1 A_G1:C57_A A 1 ? A 57 ? 19 1 1 A G 2 1_555 A C 56 1_555 -0.150 -0.072 -0.124 -2.181 -2.461 -2.134 2 A_G2:C56_A A 2 ? A 56 ? 19 1 1 A G 3 1_555 A C 55 1_555 -0.131 -0.080 -0.104 -0.611 -6.541 -1.570 3 A_G3:C55_A A 3 ? A 55 ? 19 1 1 A A 4 1_555 A U 54 1_555 0.107 -0.016 -0.178 -1.643 -10.489 -3.240 4 A_A4:U54_A A 4 ? A 54 ? 20 1 1 A U 5 1_555 A G 53 1_555 2.112 -0.431 0.073 0.218 -8.676 -4.920 5 A_U5:G53_A A 5 ? A 53 ? 28 1 1 A C 6 1_555 A G 52 1_555 0.472 -0.173 -0.110 1.656 -8.830 -1.526 6 A_C6:G52_A A 6 ? A 52 ? 19 1 1 A U 7 1_555 A G 51 1_555 2.102 -0.422 -0.042 -1.792 -5.616 -5.007 7 A_U7:G51_A A 7 ? A 51 ? 28 1 1 A G 8 1_555 A C 50 1_555 0.055 -0.071 -0.210 -3.643 -8.319 -0.963 8 A_G8:C50_A A 8 ? A 50 ? 19 1 1 A U 9 1_555 A G 49 1_555 2.106 -0.400 -0.064 -1.900 -7.042 -3.160 9 A_U9:G49_A A 9 ? A 49 ? 28 1 1 A C 10 1_555 A G 48 1_555 -0.096 -0.051 -0.074 1.557 -7.935 -1.695 10 A_C10:G48_A A 10 ? A 48 ? 19 1 1 A A 11 1_555 A A 47 1_555 1.537 1.379 -1.524 -10.672 16.341 -6.426 11 A_A11:A47_A A 11 ? A 47 ? ? 1 1 A C 12 1_555 A G 44 1_555 0.244 -0.087 -0.237 10.228 -10.733 -1.143 12 A_C12:G44_A A 12 ? A 44 ? 19 1 1 A C 13 1_555 A G 43 1_555 -0.118 -0.061 0.153 5.168 -13.877 -2.800 13 A_C13:G43_A A 13 ? A 43 ? 19 1 1 A C 14 1_555 A G 40 1_555 0.224 -0.106 -0.213 6.726 -12.950 -0.899 14 A_C14:G40_A A 14 ? A 40 ? 19 1 1 A C 15 1_555 A G 39 1_555 0.100 -0.072 -0.240 8.154 -9.561 -1.465 15 A_C15:G39_A A 15 ? A 39 ? 19 1 1 A U 17 1_555 A U 38 1_555 -3.315 -1.243 0.900 1.315 0.698 -9.161 16 A_U17:U38_A A 17 ? A 38 ? ? ? 1 A G 19 1_555 A C 37 1_555 -0.784 -0.306 -0.030 8.014 -9.497 -2.944 17 A_G19:C37_A A 19 ? A 37 ? 19 1 1 A A 20 1_555 A U 36 1_555 0.634 -0.060 -0.523 -19.020 -1.452 2.084 18 A_A20:U36_A A 20 ? A 36 ? 20 1 1 A U 21 1_555 A A 35 1_555 0.309 0.143 -0.112 -0.295 -0.931 -2.932 19 A_U21:A35_A A 21 ? A 35 ? 20 1 1 A C 22 1_555 A G 34 1_555 0.723 -0.248 -0.110 -0.741 -3.285 -1.660 20 A_C22:G34_A A 22 ? A 34 ? 19 1 1 A G 23 1_555 A C 32 1_555 -0.118 -0.080 -0.144 -2.912 -8.189 -2.397 21 A_G23:C32_A A 23 ? A 32 ? 19 1 1 A C 24 1_555 A G 31 1_555 0.040 -0.063 -0.211 5.491 -5.745 -1.458 22 A_C24:G31_A A 24 ? A 31 ? 19 1 1 A C 25 1_555 A G 30 1_555 0.384 -0.147 -0.467 7.761 -1.608 -2.163 23 A_C25:G30_A A 25 ? A 30 ? 19 1 1 A U 26 1_555 A G 29 1_555 0.927 -4.879 -0.291 -12.653 -17.162 -112.580 24 A_U26:G29_A A 26 ? A 29 ? ? 6 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 57 1_555 A G 2 1_555 A C 56 1_555 0.008 -0.570 3.907 -0.464 21.424 29.295 -4.396 -0.088 2.853 36.798 0.797 36.157 1 AA_G1G2:C56C57_AA A 1 ? A 57 ? A 2 ? A 56 ? 1 A G 2 1_555 A C 56 1_555 A G 3 1_555 A C 55 1_555 0.033 -0.685 3.842 -0.174 10.559 29.833 -3.491 -0.098 3.408 19.747 0.326 31.606 2 AA_G2G3:C55C56_AA A 2 ? A 56 ? A 3 ? A 55 ? 1 A G 3 1_555 A C 55 1_555 A A 4 1_555 A U 54 1_555 -0.118 -0.788 3.914 0.621 8.161 31.744 -3.040 0.335 3.602 14.618 -1.113 32.756 3 AA_G3A4:U54C55_AA A 3 ? A 55 ? A 4 ? A 54 ? 1 A A 4 1_555 A U 54 1_555 A U 5 1_555 A G 53 1_555 -0.036 -0.485 3.821 0.075 6.382 39.484 -1.558 0.063 3.702 9.372 -0.110 39.976 4 AA_A4U5:G53U54_AA A 4 ? A 54 ? A 5 ? A 53 ? 1 A U 5 1_555 A G 53 1_555 A C 6 1_555 A G 52 1_555 0.365 -1.028 3.574 4.788 9.818 25.307 -4.681 0.463 2.992 21.194 -10.337 27.528 5 AA_U5C6:G52G53_AA A 5 ? A 53 ? A 6 ? A 52 ? 1 A C 6 1_555 A G 52 1_555 A U 7 1_555 A G 51 1_555 -0.072 -0.529 4.007 1.821 10.099 37.590 -2.272 0.375 3.740 15.326 -2.764 38.917 6 AA_C6U7:G51G52_AA A 6 ? A 52 ? A 7 ? A 51 ? 1 A U 7 1_555 A G 51 1_555 A G 8 1_555 A C 50 1_555 0.354 -1.003 3.824 3.789 7.447 23.449 -4.864 0.469 3.366 17.622 -8.967 24.874 7 AA_U7G8:C50G51_AA A 7 ? A 51 ? A 8 ? A 50 ? 1 A G 8 1_555 A C 50 1_555 A U 9 1_555 A G 49 1_555 0.001 -0.493 3.834 0.736 7.629 38.988 -1.756 0.098 3.677 11.298 -1.090 39.705 8 AA_G8U9:G49C50_AA A 8 ? A 50 ? A 9 ? A 49 ? 1 A U 9 1_555 A G 49 1_555 A C 10 1_555 A G 48 1_555 0.301 -1.051 3.447 3.637 12.015 22.645 -5.643 0.324 2.585 28.004 -8.477 25.852 9 AA_U9C10:G48G49_AA A 9 ? A 49 ? A 10 ? A 48 ? 1 A C 10 1_555 A G 48 1_555 A A 11 1_555 A A 47 1_555 0.368 -0.662 4.990 6.420 -0.715 35.555 -0.912 0.802 4.990 -1.160 -10.407 36.118 10 AA_C10A11:A47G48_AA A 10 ? A 48 ? A 11 ? A 47 ? 1 A A 11 1_555 A A 47 1_555 A C 12 1_555 A G 44 1_555 5.733 -0.318 2.454 0.356 32.834 54.524 -1.404 -5.475 2.029 32.750 -0.355 62.992 11 AA_A11C12:G44A47_AA A 11 ? A 47 ? A 12 ? A 44 ? 1 A C 12 1_555 A G 44 1_555 A C 13 1_555 A G 43 1_555 -0.079 -1.454 3.814 -3.099 19.094 33.814 -4.664 -0.283 2.650 29.979 4.866 38.815 12 AA_C12C13:G43G44_AA A 12 ? A 44 ? A 13 ? A 43 ? 1 A C 13 1_555 A G 43 1_555 A C 14 1_555 A G 40 1_555 -0.300 -0.502 5.671 -24.405 40.280 34.364 -4.399 -2.040 3.254 47.783 28.951 57.717 13 AA_C13C14:G40G43_AA A 13 ? A 43 ? A 14 ? A 40 ? 1 A C 14 1_555 A G 40 1_555 A C 15 1_555 A G 39 1_555 0.202 -0.649 3.640 1.387 8.247 32.817 -2.567 -0.103 3.387 14.309 -2.406 33.837 14 AA_C14C15:G39G40_AA A 14 ? A 40 ? A 15 ? A 39 ? 1 A C 15 1_555 A G 39 1_555 A U 17 1_555 A U 38 1_555 -2.791 -1.598 5.728 9.167 23.101 37.504 -5.366 4.963 3.491 32.001 -12.699 44.744 15 AA_C15U17:U38G39_AA A 15 ? A 39 ? A 17 ? A 38 ? 1 A U 17 1_555 A U 38 1_555 A G 19 1_555 A C 37 1_555 -1.896 -1.215 3.665 -3.873 2.197 36.762 -2.250 2.393 3.762 3.467 6.114 37.022 16 AA_U17G19:C37U38_AA A 17 ? A 38 ? A 19 ? A 37 ? 1 A G 19 1_555 A C 37 1_555 A A 20 1_555 A U 36 1_555 0.073 -0.936 4.401 -0.560 34.894 41.023 -3.878 -0.127 2.848 41.889 0.672 53.366 17 AA_G19A20:U36C37_AA A 19 ? A 37 ? A 20 ? A 36 ? 1 A A 20 1_555 A U 36 1_555 A U 21 1_555 A A 35 1_555 -0.275 -0.346 3.318 -0.689 11.436 25.076 -3.517 0.411 2.892 24.756 1.492 27.532 18 AA_A20U21:A35U36_AA A 20 ? A 36 ? A 21 ? A 35 ? 1 A U 21 1_555 A A 35 1_555 A C 22 1_555 A G 34 1_555 0.315 -0.719 3.953 0.371 19.442 29.005 -4.621 -0.461 2.921 34.374 -0.656 34.803 19 AA_U21C22:G34A35_AA A 21 ? A 35 ? A 22 ? A 34 ? 1 A C 22 1_555 A G 34 1_555 A G 23 1_555 A C 32 1_555 2.407 -1.552 5.467 -15.273 28.307 42.241 -4.445 -4.168 2.981 34.026 18.359 52.644 20 AA_C22G23:C32G34_AA A 22 ? A 34 ? A 23 ? A 32 ? 1 A G 23 1_555 A C 32 1_555 A C 24 1_555 A G 31 1_555 -0.078 -0.931 3.681 0.462 3.464 32.844 -2.291 0.223 3.566 6.106 -0.815 33.024 21 AA_G23C24:G31C32_AA A 23 ? A 32 ? A 24 ? A 31 ? 1 A C 24 1_555 A G 31 1_555 A C 25 1_555 A G 30 1_555 -0.143 -0.506 3.833 2.012 15.236 30.191 -3.681 0.617 3.203 27.152 -3.585 33.796 22 AA_C24C25:G30G31_AA A 24 ? A 31 ? A 25 ? A 30 ? 1 A C 25 1_555 A G 30 1_555 A U 26 1_555 A G 29 1_555 -0.582 -0.556 3.819 20.261 15.835 88.988 -0.740 0.857 3.548 11.108 -14.214 91.875 23 AA_C25U26:G29G30_AA A 25 ? A 30 ? A 26 ? A 29 ? # _pdbx_audit_support.funding_organization 'French National Research Agency' _pdbx_audit_support.country France _pdbx_audit_support.grant_number ANR-2010-JCJC-1507-01 _pdbx_audit_support.ordinal 1 #