data_5JKD # _entry.id 5JKD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5JKD pdb_00005jkd 10.2210/pdb5jkd/pdb WWPDB D_1000220778 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 5JKE PDB . unspecified 5JKC PDB . unspecified 5JKB PDB . unspecified 5JKA PDB . unspecified 5JK9 PDB . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5JKD _pdbx_database_status.recvd_initial_deposition_date 2016-04-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ohto, U.' 1 'Ishida, H.' 2 'Shimizu, T.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nature _citation.journal_id_ASTM NATUAS _citation.journal_id_CSD 0006 _citation.journal_id_ISSN 1476-4687 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 534 _citation.language ? _citation.page_first 566 _citation.page_last 569 _citation.title 'Structure of IZUMO1-JUNO reveals sperm-oocyte recognition during mammalian fertilization' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/nature18596 _citation.pdbx_database_id_PubMed 27309808 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ohto, U.' 1 ? primary 'Ishida, H.' 2 ? primary 'Krayukhina, E.' 3 ? primary 'Uchiyama, S.' 4 ? primary 'Inoue, N.' 5 ? primary 'Shimizu, T.' 6 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 104.24 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5JKD _cell.details ? _cell.formula_units_Z ? _cell.length_a 145.604 _cell.length_a_esd ? _cell.length_b 65.377 _cell.length_b_esd ? _cell.length_c 77.199 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JKD _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Izumo sperm-egg fusion protein 1' 28163.326 1 ? ? 'UNP residues 22-255' ? 2 polymer man 'Sperm-egg fusion protein Juno' 25428.842 1 ? ? 'UNP residues 20-228' ? 3 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 5 water nat water 18.015 3 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Oocyte binding/fusion factor,OBF,Sperm-specific protein izumo' 2 'Folate receptor 4,Folate receptor delta,FR-delta,IZUMO1 receptor protein JUNO' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;RSPWCVICDPSVVLALKSLEKDYLPGHLDAKHHKAMMERVENAVKDFQELSLNEDAYMGVVDEATLQKGSWSLLKDLKRI TDSDVKGDLFVKELFWMLHLQKETFATYVARFQKEAYCPNKCGVMLQTLIWCKNCKKEVHACRKSYDCGERNVEVPQMED MILDCELNWHQASEGLTDYSFYRVWGNNTETLVSKGKEATLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPKEF LEVLFQ ; ;RSPWCVICDPSVVLALKSLEKDYLPGHLDAKHHKAMMERVENAVKDFQELSLNEDAYMGVVDEATLQKGSWSLLKDLKRI TDSDVKGDLFVKELFWMLHLQKETFATYVARFQKEAYCPNKCGVMLQTLIWCKNCKKEVHACRKSYDCGERNVEVPQMED MILDCELNWHQASEGLTDYSFYRVWGNNTETLVSKGKEATLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPKEF LEVLFQ ; A ? 2 'polypeptide(L)' no no ;RSPWGDELLNICMNAKHHKRVPSPEDKLYEECIPWKDNACCTLTTSWEAHLDVSPLYNFSLFHCGLLMPGCRKHFIQAIC FYECSPNLGPWIQPVGSLGWEVAPSGQGERVVNVPLCQEDCEEWWEDCRMSYTCKSNWRGGWDWSQGKNRCPKGAQCLPF SHYFPTPADLCEKTWSNSFKASPERRNSGRCLQKWFEPAQGNPNVAVARLFASEFLEVLFQ ; ;RSPWGDELLNICMNAKHHKRVPSPEDKLYEECIPWKDNACCTLTTSWEAHLDVSPLYNFSLFHCGLLMPGCRKHFIQAIC FYECSPNLGPWIQPVGSLGWEVAPSGQGERVVNVPLCQEDCEEWWEDCRMSYTCKSNWRGGWDWSQGKNRCPKGAQCLPF SHYFPTPADLCEKTWSNSFKASPERRNSGRCLQKWFEPAQGNPNVAVARLFASEFLEVLFQ ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 SER n 1 3 PRO n 1 4 TRP n 1 5 CYS n 1 6 VAL n 1 7 ILE n 1 8 CYS n 1 9 ASP n 1 10 PRO n 1 11 SER n 1 12 VAL n 1 13 VAL n 1 14 LEU n 1 15 ALA n 1 16 LEU n 1 17 LYS n 1 18 SER n 1 19 LEU n 1 20 GLU n 1 21 LYS n 1 22 ASP n 1 23 TYR n 1 24 LEU n 1 25 PRO n 1 26 GLY n 1 27 HIS n 1 28 LEU n 1 29 ASP n 1 30 ALA n 1 31 LYS n 1 32 HIS n 1 33 HIS n 1 34 LYS n 1 35 ALA n 1 36 MET n 1 37 MET n 1 38 GLU n 1 39 ARG n 1 40 VAL n 1 41 GLU n 1 42 ASN n 1 43 ALA n 1 44 VAL n 1 45 LYS n 1 46 ASP n 1 47 PHE n 1 48 GLN n 1 49 GLU n 1 50 LEU n 1 51 SER n 1 52 LEU n 1 53 ASN n 1 54 GLU n 1 55 ASP n 1 56 ALA n 1 57 TYR n 1 58 MET n 1 59 GLY n 1 60 VAL n 1 61 VAL n 1 62 ASP n 1 63 GLU n 1 64 ALA n 1 65 THR n 1 66 LEU n 1 67 GLN n 1 68 LYS n 1 69 GLY n 1 70 SER n 1 71 TRP n 1 72 SER n 1 73 LEU n 1 74 LEU n 1 75 LYS n 1 76 ASP n 1 77 LEU n 1 78 LYS n 1 79 ARG n 1 80 ILE n 1 81 THR n 1 82 ASP n 1 83 SER n 1 84 ASP n 1 85 VAL n 1 86 LYS n 1 87 GLY n 1 88 ASP n 1 89 LEU n 1 90 PHE n 1 91 VAL n 1 92 LYS n 1 93 GLU n 1 94 LEU n 1 95 PHE n 1 96 TRP n 1 97 MET n 1 98 LEU n 1 99 HIS n 1 100 LEU n 1 101 GLN n 1 102 LYS n 1 103 GLU n 1 104 THR n 1 105 PHE n 1 106 ALA n 1 107 THR n 1 108 TYR n 1 109 VAL n 1 110 ALA n 1 111 ARG n 1 112 PHE n 1 113 GLN n 1 114 LYS n 1 115 GLU n 1 116 ALA n 1 117 TYR n 1 118 CYS n 1 119 PRO n 1 120 ASN n 1 121 LYS n 1 122 CYS n 1 123 GLY n 1 124 VAL n 1 125 MET n 1 126 LEU n 1 127 GLN n 1 128 THR n 1 129 LEU n 1 130 ILE n 1 131 TRP n 1 132 CYS n 1 133 LYS n 1 134 ASN n 1 135 CYS n 1 136 LYS n 1 137 LYS n 1 138 GLU n 1 139 VAL n 1 140 HIS n 1 141 ALA n 1 142 CYS n 1 143 ARG n 1 144 LYS n 1 145 SER n 1 146 TYR n 1 147 ASP n 1 148 CYS n 1 149 GLY n 1 150 GLU n 1 151 ARG n 1 152 ASN n 1 153 VAL n 1 154 GLU n 1 155 VAL n 1 156 PRO n 1 157 GLN n 1 158 MET n 1 159 GLU n 1 160 ASP n 1 161 MET n 1 162 ILE n 1 163 LEU n 1 164 ASP n 1 165 CYS n 1 166 GLU n 1 167 LEU n 1 168 ASN n 1 169 TRP n 1 170 HIS n 1 171 GLN n 1 172 ALA n 1 173 SER n 1 174 GLU n 1 175 GLY n 1 176 LEU n 1 177 THR n 1 178 ASP n 1 179 TYR n 1 180 SER n 1 181 PHE n 1 182 TYR n 1 183 ARG n 1 184 VAL n 1 185 TRP n 1 186 GLY n 1 187 ASN n 1 188 ASN n 1 189 THR n 1 190 GLU n 1 191 THR n 1 192 LEU n 1 193 VAL n 1 194 SER n 1 195 LYS n 1 196 GLY n 1 197 LYS n 1 198 GLU n 1 199 ALA n 1 200 THR n 1 201 LEU n 1 202 THR n 1 203 LYS n 1 204 PRO n 1 205 MET n 1 206 VAL n 1 207 GLY n 1 208 PRO n 1 209 GLU n 1 210 ASP n 1 211 ALA n 1 212 GLY n 1 213 SER n 1 214 TYR n 1 215 ARG n 1 216 CYS n 1 217 GLU n 1 218 LEU n 1 219 GLY n 1 220 SER n 1 221 VAL n 1 222 ASN n 1 223 SER n 1 224 SER n 1 225 PRO n 1 226 ALA n 1 227 THR n 1 228 ILE n 1 229 ILE n 1 230 ASN n 1 231 PHE n 1 232 HIS n 1 233 VAL n 1 234 THR n 1 235 VAL n 1 236 LEU n 1 237 PRO n 1 238 LYS n 1 239 GLU n 1 240 PHE n 1 241 LEU n 1 242 GLU n 1 243 VAL n 1 244 LEU n 1 245 PHE n 1 246 GLN n 2 1 ARG n 2 2 SER n 2 3 PRO n 2 4 TRP n 2 5 GLY n 2 6 ASP n 2 7 GLU n 2 8 LEU n 2 9 LEU n 2 10 ASN n 2 11 ILE n 2 12 CYS n 2 13 MET n 2 14 ASN n 2 15 ALA n 2 16 LYS n 2 17 HIS n 2 18 HIS n 2 19 LYS n 2 20 ARG n 2 21 VAL n 2 22 PRO n 2 23 SER n 2 24 PRO n 2 25 GLU n 2 26 ASP n 2 27 LYS n 2 28 LEU n 2 29 TYR n 2 30 GLU n 2 31 GLU n 2 32 CYS n 2 33 ILE n 2 34 PRO n 2 35 TRP n 2 36 LYS n 2 37 ASP n 2 38 ASN n 2 39 ALA n 2 40 CYS n 2 41 CYS n 2 42 THR n 2 43 LEU n 2 44 THR n 2 45 THR n 2 46 SER n 2 47 TRP n 2 48 GLU n 2 49 ALA n 2 50 HIS n 2 51 LEU n 2 52 ASP n 2 53 VAL n 2 54 SER n 2 55 PRO n 2 56 LEU n 2 57 TYR n 2 58 ASN n 2 59 PHE n 2 60 SER n 2 61 LEU n 2 62 PHE n 2 63 HIS n 2 64 CYS n 2 65 GLY n 2 66 LEU n 2 67 LEU n 2 68 MET n 2 69 PRO n 2 70 GLY n 2 71 CYS n 2 72 ARG n 2 73 LYS n 2 74 HIS n 2 75 PHE n 2 76 ILE n 2 77 GLN n 2 78 ALA n 2 79 ILE n 2 80 CYS n 2 81 PHE n 2 82 TYR n 2 83 GLU n 2 84 CYS n 2 85 SER n 2 86 PRO n 2 87 ASN n 2 88 LEU n 2 89 GLY n 2 90 PRO n 2 91 TRP n 2 92 ILE n 2 93 GLN n 2 94 PRO n 2 95 VAL n 2 96 GLY n 2 97 SER n 2 98 LEU n 2 99 GLY n 2 100 TRP n 2 101 GLU n 2 102 VAL n 2 103 ALA n 2 104 PRO n 2 105 SER n 2 106 GLY n 2 107 GLN n 2 108 GLY n 2 109 GLU n 2 110 ARG n 2 111 VAL n 2 112 VAL n 2 113 ASN n 2 114 VAL n 2 115 PRO n 2 116 LEU n 2 117 CYS n 2 118 GLN n 2 119 GLU n 2 120 ASP n 2 121 CYS n 2 122 GLU n 2 123 GLU n 2 124 TRP n 2 125 TRP n 2 126 GLU n 2 127 ASP n 2 128 CYS n 2 129 ARG n 2 130 MET n 2 131 SER n 2 132 TYR n 2 133 THR n 2 134 CYS n 2 135 LYS n 2 136 SER n 2 137 ASN n 2 138 TRP n 2 139 ARG n 2 140 GLY n 2 141 GLY n 2 142 TRP n 2 143 ASP n 2 144 TRP n 2 145 SER n 2 146 GLN n 2 147 GLY n 2 148 LYS n 2 149 ASN n 2 150 ARG n 2 151 CYS n 2 152 PRO n 2 153 LYS n 2 154 GLY n 2 155 ALA n 2 156 GLN n 2 157 CYS n 2 158 LEU n 2 159 PRO n 2 160 PHE n 2 161 SER n 2 162 HIS n 2 163 TYR n 2 164 PHE n 2 165 PRO n 2 166 THR n 2 167 PRO n 2 168 ALA n 2 169 ASP n 2 170 LEU n 2 171 CYS n 2 172 GLU n 2 173 LYS n 2 174 THR n 2 175 TRP n 2 176 SER n 2 177 ASN n 2 178 SER n 2 179 PHE n 2 180 LYS n 2 181 ALA n 2 182 SER n 2 183 PRO n 2 184 GLU n 2 185 ARG n 2 186 ARG n 2 187 ASN n 2 188 SER n 2 189 GLY n 2 190 ARG n 2 191 CYS n 2 192 LEU n 2 193 GLN n 2 194 LYS n 2 195 TRP n 2 196 PHE n 2 197 GLU n 2 198 PRO n 2 199 ALA n 2 200 GLN n 2 201 GLY n 2 202 ASN n 2 203 PRO n 2 204 ASN n 2 205 VAL n 2 206 ALA n 2 207 VAL n 2 208 ALA n 2 209 ARG n 2 210 LEU n 2 211 PHE n 2 212 ALA n 2 213 SER n 2 214 GLU n 2 215 PHE n 2 216 LEU n 2 217 GLU n 2 218 VAL n 2 219 LEU n 2 220 PHE n 2 221 GLN n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 246 Human ? IZUMO1 ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? Drosophila 7215 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 221 Human ? 'IZUMO1R, FOLR4, JUNO' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? Drosophila 7215 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP IZUM1_HUMAN Q8IYV9 ? 1 ;CVICDPSVVLALKSLEKDYLPGHLDAKHHKAMMERVENAVKDFQELSLNEDAYMGVVDEATLQKGSWSLLKDLKRITDSD VKGDLFVKELFWMLHLQKETFATYVARFQKEAYCPNKCGVMLQTLIWCKNCKKEVHACRKSYDCGERNVEVPQMEDMILD CELNWHQASEGLTDYSFYRVWGNNTETLVSKGKEATLTKPMVGPEDAGSYRCELGSVNSSPATIINFHVTVLPK ; 22 2 UNP JUNO_HUMAN A6ND01 ? 2 ;GDELLNICMNAKHHKRVPSPEDKLYEECIPWKDNACCTLTTSWEAHLDVSPLYNFSLFHCGLLMPGCRKHFIQAICFYEC SPNLGPWIQPVGSLGWEVAPSGQGERVVNVPLCQEDCEEWWEDCRMSYTCKSNWRGGWDWSQGKNRCPKGAQCLPFSHYF PTPADLCEKTWSNSFKASPERRNSGRCLQKWFEPAQGNPNVAVARLFAS ; 20 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5JKD A 5 ? 238 ? Q8IYV9 22 ? 255 ? 22 255 2 2 5JKD B 5 ? 213 ? A6ND01 20 ? 228 ? 20 228 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5JKD ARG A 1 ? UNP Q8IYV9 ? ? 'expression tag' 18 1 1 5JKD SER A 2 ? UNP Q8IYV9 ? ? 'expression tag' 19 2 1 5JKD PRO A 3 ? UNP Q8IYV9 ? ? 'expression tag' 20 3 1 5JKD TRP A 4 ? UNP Q8IYV9 ? ? 'expression tag' 21 4 1 5JKD GLU A 239 ? UNP Q8IYV9 ? ? 'expression tag' 256 5 1 5JKD PHE A 240 ? UNP Q8IYV9 ? ? 'expression tag' 257 6 1 5JKD LEU A 241 ? UNP Q8IYV9 ? ? 'expression tag' 258 7 1 5JKD GLU A 242 ? UNP Q8IYV9 ? ? 'expression tag' 259 8 1 5JKD VAL A 243 ? UNP Q8IYV9 ? ? 'expression tag' 260 9 1 5JKD LEU A 244 ? UNP Q8IYV9 ? ? 'expression tag' 261 10 1 5JKD PHE A 245 ? UNP Q8IYV9 ? ? 'expression tag' 262 11 1 5JKD GLN A 246 ? UNP Q8IYV9 ? ? 'expression tag' 263 12 2 5JKD ARG B 1 ? UNP A6ND01 ? ? 'expression tag' 16 13 2 5JKD SER B 2 ? UNP A6ND01 ? ? 'expression tag' 17 14 2 5JKD PRO B 3 ? UNP A6ND01 ? ? 'expression tag' 18 15 2 5JKD TRP B 4 ? UNP A6ND01 ? ? 'expression tag' 19 16 2 5JKD GLU B 214 ? UNP A6ND01 ? ? 'expression tag' 229 17 2 5JKD PHE B 215 ? UNP A6ND01 ? ? 'expression tag' 230 18 2 5JKD LEU B 216 ? UNP A6ND01 ? ? 'expression tag' 231 19 2 5JKD GLU B 217 ? UNP A6ND01 ? ? 'expression tag' 232 20 2 5JKD VAL B 218 ? UNP A6ND01 ? ? 'expression tag' 233 21 2 5JKD LEU B 219 ? UNP A6ND01 ? ? 'expression tag' 234 22 2 5JKD PHE B 220 ? UNP A6ND01 ? ? 'expression tag' 235 23 2 5JKD GLN B 221 ? UNP A6ND01 ? ? 'expression tag' 236 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5JKD _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.32 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 62.98 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1.0 M (NH4)2SO4, 1.0 M KCl, 0.1 M HEPES-NaOH pH 7.0' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 2M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-03-12 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NE3A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline AR-NE3A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5JKD _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.90 _reflns.d_resolution_low 50.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 15805 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 21.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high . _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -5.40 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -1.37 _refine.aniso_B[2][2] 4.18 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 1.69 _refine.B_iso_max ? _refine.B_iso_mean 88.915 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.937 _refine.correlation_coeff_Fo_to_Fc_free 0.919 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5JKD _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.90 _refine.ls_d_res_low 50.0 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 15006 _refine.ls_number_reflns_R_free 799 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.77 _refine.ls_percent_reflns_R_free 5.1 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.22169 _refine.ls_R_factor_R_free 0.25080 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.22008 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model '5JK9, 5JKA' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 1.243 _refine.pdbx_overall_ESU_R_Free 0.358 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 37.844 _refine.overall_SU_ML 0.314 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 3480 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 3 _refine_hist.number_atoms_total 3512 _refine_hist.d_res_high 2.90 _refine_hist.d_res_low 50.0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.011 0.019 3622 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 3306 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.564 1.947 4920 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.983 3.000 7654 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.777 5.000 429 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 34.455 24.286 168 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 17.272 15.000 606 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 15.595 15.000 18 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.086 0.200 513 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 0.021 4035 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 837 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 5.061 6.119 1728 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 5.062 6.118 1727 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 7.874 9.167 2153 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 7.872 9.168 2154 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 5.919 6.761 1894 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 5.918 6.763 1895 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 9.269 9.913 2768 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 14.840 58.356 14899 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 14.839 58.361 14899 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.898 _refine_ls_shell.d_res_low 2.973 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 56 _refine_ls_shell.number_reflns_R_work 1108 _refine_ls_shell.percent_reflns_obs 97.82 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.310 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.362 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5JKD _struct.title 'Crystal structure of human IZUMO1-JUNO complex (crystal form 2)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5JKD _struct_keywords.text 'fertilization, IZUMO1, JUNO, CELL ADHESION' _struct_keywords.pdbx_keywords 'CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 TRP A 4 ? CYS A 8 ? TRP A 21 CYS A 25 5 ? 5 HELX_P HELX_P2 AA2 ASP A 9 ? TYR A 23 ? ASP A 26 TYR A 40 1 ? 15 HELX_P HELX_P3 AA3 TYR A 23 ? LEU A 28 ? TYR A 40 LEU A 45 1 ? 6 HELX_P HELX_P4 AA4 ASP A 29 ? LYS A 31 ? ASP A 46 LYS A 48 5 ? 3 HELX_P HELX_P5 AA5 HIS A 32 ? ASP A 46 ? HIS A 49 ASP A 63 1 ? 15 HELX_P HELX_P6 AA6 ASP A 62 ? SER A 83 ? ASP A 79 SER A 100 1 ? 22 HELX_P HELX_P7 AA7 LYS A 86 ? ALA A 116 ? LYS A 103 ALA A 133 1 ? 31 HELX_P HELX_P8 AA8 LEU A 167 ? ALA A 172 ? LEU A 184 ALA A 189 5 ? 6 HELX_P HELX_P9 AA9 GLY A 207 ? ALA A 211 ? GLY A 224 ALA A 228 5 ? 5 HELX_P HELX_P10 AB1 GLY B 5 ? LEU B 9 ? GLY B 20 LEU B 24 5 ? 5 HELX_P HELX_P11 AB2 TYR B 29 ? LYS B 36 ? TYR B 44 LYS B 51 5 ? 8 HELX_P HELX_P12 AB3 THR B 42 ? HIS B 50 ? THR B 57 HIS B 65 1 ? 9 HELX_P HELX_P13 AB4 LEU B 61 ? GLY B 65 ? LEU B 76 GLY B 80 5 ? 5 HELX_P HELX_P14 AB5 MET B 68 ? SER B 85 ? MET B 83 SER B 100 1 ? 18 HELX_P HELX_P15 AB6 LEU B 88 ? PRO B 90 ? LEU B 103 PRO B 105 5 ? 3 HELX_P HELX_P16 AB7 CYS B 117 ? CYS B 128 ? CYS B 132 CYS B 143 1 ? 12 HELX_P HELX_P17 AB8 PHE B 160 ? PHE B 164 ? PHE B 175 PHE B 179 1 ? 5 HELX_P HELX_P18 AB9 THR B 166 ? THR B 174 ? THR B 181 THR B 189 1 ? 9 HELX_P HELX_P19 AC1 GLU B 197 ? GLY B 201 ? GLU B 212 GLY B 216 5 ? 5 HELX_P HELX_P20 AC2 ASN B 204 ? SER B 213 ? ASN B 219 SER B 228 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 132 SG ? ? A CYS 22 A CYS 149 1_555 ? ? ? ? ? ? ? 2.062 ? ? disulf2 disulf ? ? A CYS 8 SG ? ? ? 1_555 A CYS 135 SG ? ? A CYS 25 A CYS 152 1_555 ? ? ? ? ? ? ? 2.074 ? ? disulf3 disulf ? ? A CYS 118 SG ? ? ? 1_555 A CYS 142 SG ? ? A CYS 135 A CYS 159 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf4 disulf ? ? A CYS 122 SG ? ? ? 1_555 A CYS 148 SG ? ? A CYS 139 A CYS 165 1_555 ? ? ? ? ? ? ? 2.090 ? ? disulf5 disulf ? ? A CYS 165 SG ? ? ? 1_555 A CYS 216 SG ? ? A CYS 182 A CYS 233 1_555 ? ? ? ? ? ? ? 2.006 ? ? disulf6 disulf ? ? B CYS 12 SG ? ? ? 1_555 B CYS 40 SG ? ? B CYS 27 B CYS 55 1_555 ? ? ? ? ? ? ? 2.064 ? ? disulf7 disulf ? ? B CYS 32 SG ? ? ? 1_555 B CYS 80 SG ? ? B CYS 47 B CYS 95 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf8 disulf ? ? B CYS 41 SG ? ? ? 1_555 B CYS 84 SG ? ? B CYS 56 B CYS 99 1_555 ? ? ? ? ? ? ? 2.026 ? ? disulf9 disulf ? ? B CYS 64 SG ? ? ? 1_555 B CYS 157 SG ? ? B CYS 79 B CYS 172 1_555 ? ? ? ? ? ? ? 2.058 ? ? disulf10 disulf ? ? B CYS 71 SG ? ? ? 1_555 B CYS 128 SG ? ? B CYS 86 B CYS 143 1_555 ? ? ? ? ? ? ? 2.053 ? ? disulf11 disulf ? ? B CYS 117 SG ? ? ? 1_555 B CYS 191 SG ? ? B CYS 132 B CYS 206 1_555 ? ? ? ? ? ? ? 2.075 ? ? disulf12 disulf ? ? B CYS 121 SG ? ? ? 1_555 B CYS 171 SG ? ? B CYS 136 B CYS 186 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf13 disulf ? ? B CYS 134 SG ? ? ? 1_555 B CYS 151 SG ? ? B CYS 149 B CYS 166 1_555 ? ? ? ? ? ? ? 2.036 ? ? covale1 covale one ? A ASN 187 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 204 A NAG 300 1_555 ? ? ? ? ? ? ? 1.452 ? N-Glycosylation covale2 covale one ? B ASN 58 ND2 ? ? ? 1_555 D NAG . C1 ? ? B ASN 73 B NAG 301 1_555 ? ? ? ? ? ? ? 1.443 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 5 ? AA3 ? 2 ? AA4 ? 2 ? AA5 ? 2 ? AA6 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? parallel AA6 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 60 ? VAL A 61 ? VAL A 77 VAL A 78 AA1 2 GLY A 123 ? TRP A 131 ? GLY A 140 TRP A 148 AA1 3 LYS A 137 ? SER A 145 ? LYS A 154 SER A 162 AA2 1 GLU A 150 ? PRO A 156 ? GLU A 167 PRO A 173 AA2 2 THR A 227 ? LEU A 236 ? THR A 244 LEU A 253 AA2 3 GLY A 212 ? SER A 220 ? GLY A 229 SER A 237 AA2 4 LEU A 176 ? VAL A 184 ? LEU A 193 VAL A 201 AA2 5 GLU A 190 ? GLY A 196 ? GLU A 207 GLY A 213 AA3 1 MET A 161 ? ASP A 164 ? MET A 178 ASP A 181 AA3 2 THR A 200 ? LYS A 203 ? THR A 217 LYS A 220 AA4 1 ILE B 92 ? GLN B 93 ? ILE B 107 GLN B 108 AA4 2 ARG B 110 ? VAL B 111 ? ARG B 125 VAL B 126 AA5 1 VAL B 114 ? LEU B 116 ? VAL B 129 LEU B 131 AA5 2 PHE B 179 ? ALA B 181 ? PHE B 194 ALA B 196 AA6 1 TYR B 132 ? THR B 133 ? TYR B 147 THR B 148 AA6 2 LEU B 158 ? PRO B 159 ? LEU B 173 PRO B 174 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 61 ? N VAL A 78 O ILE A 130 ? O ILE A 147 AA1 2 3 N MET A 125 ? N MET A 142 O CYS A 142 ? O CYS A 159 AA2 1 2 N ARG A 151 ? N ARG A 168 O HIS A 232 ? O HIS A 249 AA2 2 3 O ILE A 229 ? O ILE A 246 N CYS A 216 ? N CYS A 233 AA2 3 4 O GLU A 217 ? O GLU A 234 N SER A 180 ? N SER A 197 AA2 4 5 N TYR A 179 ? N TYR A 196 O GLY A 196 ? O GLY A 213 AA3 1 2 N MET A 161 ? N MET A 178 O LYS A 203 ? O LYS A 220 AA4 1 2 N GLN B 93 ? N GLN B 108 O ARG B 110 ? O ARG B 125 AA5 1 2 N VAL B 114 ? N VAL B 129 O LYS B 180 ? O LYS B 195 AA6 1 2 N THR B 133 ? N THR B 148 O LEU B 158 ? O LEU B 173 # _atom_sites.entry_id 5JKD _atom_sites.fract_transf_matrix[1][1] 0.006868 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001742 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015296 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013364 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 18 18 ARG ARG A . n A 1 2 SER 2 19 19 SER SER A . n A 1 3 PRO 3 20 20 PRO PRO A . n A 1 4 TRP 4 21 21 TRP TRP A . n A 1 5 CYS 5 22 22 CYS CYS A . n A 1 6 VAL 6 23 23 VAL VAL A . n A 1 7 ILE 7 24 24 ILE ILE A . n A 1 8 CYS 8 25 25 CYS CYS A . n A 1 9 ASP 9 26 26 ASP ASP A . n A 1 10 PRO 10 27 27 PRO PRO A . n A 1 11 SER 11 28 28 SER SER A . n A 1 12 VAL 12 29 29 VAL VAL A . n A 1 13 VAL 13 30 30 VAL VAL A . n A 1 14 LEU 14 31 31 LEU LEU A . n A 1 15 ALA 15 32 32 ALA ALA A . n A 1 16 LEU 16 33 33 LEU LEU A . n A 1 17 LYS 17 34 34 LYS LYS A . n A 1 18 SER 18 35 35 SER SER A . n A 1 19 LEU 19 36 36 LEU LEU A . n A 1 20 GLU 20 37 37 GLU GLU A . n A 1 21 LYS 21 38 38 LYS LYS A . n A 1 22 ASP 22 39 39 ASP ASP A . n A 1 23 TYR 23 40 40 TYR TYR A . n A 1 24 LEU 24 41 41 LEU LEU A . n A 1 25 PRO 25 42 42 PRO PRO A . n A 1 26 GLY 26 43 43 GLY GLY A . n A 1 27 HIS 27 44 44 HIS HIS A . n A 1 28 LEU 28 45 45 LEU LEU A . n A 1 29 ASP 29 46 46 ASP ASP A . n A 1 30 ALA 30 47 47 ALA ALA A . n A 1 31 LYS 31 48 48 LYS LYS A . n A 1 32 HIS 32 49 49 HIS HIS A . n A 1 33 HIS 33 50 50 HIS HIS A . n A 1 34 LYS 34 51 51 LYS LYS A . n A 1 35 ALA 35 52 52 ALA ALA A . n A 1 36 MET 36 53 53 MET MET A . n A 1 37 MET 37 54 54 MET MET A . n A 1 38 GLU 38 55 55 GLU GLU A . n A 1 39 ARG 39 56 56 ARG ARG A . n A 1 40 VAL 40 57 57 VAL VAL A . n A 1 41 GLU 41 58 58 GLU GLU A . n A 1 42 ASN 42 59 59 ASN ASN A . n A 1 43 ALA 43 60 60 ALA ALA A . n A 1 44 VAL 44 61 61 VAL VAL A . n A 1 45 LYS 45 62 62 LYS LYS A . n A 1 46 ASP 46 63 63 ASP ASP A . n A 1 47 PHE 47 64 64 PHE PHE A . n A 1 48 GLN 48 65 65 GLN GLN A . n A 1 49 GLU 49 66 66 GLU GLU A . n A 1 50 LEU 50 67 67 LEU LEU A . n A 1 51 SER 51 68 ? ? ? A . n A 1 52 LEU 52 69 ? ? ? A . n A 1 53 ASN 53 70 ? ? ? A . n A 1 54 GLU 54 71 ? ? ? A . n A 1 55 ASP 55 72 ? ? ? A . n A 1 56 ALA 56 73 73 ALA ALA A . n A 1 57 TYR 57 74 74 TYR TYR A . n A 1 58 MET 58 75 75 MET MET A . n A 1 59 GLY 59 76 76 GLY GLY A . n A 1 60 VAL 60 77 77 VAL VAL A . n A 1 61 VAL 61 78 78 VAL VAL A . n A 1 62 ASP 62 79 79 ASP ASP A . n A 1 63 GLU 63 80 80 GLU GLU A . n A 1 64 ALA 64 81 81 ALA ALA A . n A 1 65 THR 65 82 82 THR THR A . n A 1 66 LEU 66 83 83 LEU LEU A . n A 1 67 GLN 67 84 84 GLN GLN A . n A 1 68 LYS 68 85 85 LYS LYS A . n A 1 69 GLY 69 86 86 GLY GLY A . n A 1 70 SER 70 87 87 SER SER A . n A 1 71 TRP 71 88 88 TRP TRP A . n A 1 72 SER 72 89 89 SER SER A . n A 1 73 LEU 73 90 90 LEU LEU A . n A 1 74 LEU 74 91 91 LEU LEU A . n A 1 75 LYS 75 92 92 LYS LYS A . n A 1 76 ASP 76 93 93 ASP ASP A . n A 1 77 LEU 77 94 94 LEU LEU A . n A 1 78 LYS 78 95 95 LYS LYS A . n A 1 79 ARG 79 96 96 ARG ARG A . n A 1 80 ILE 80 97 97 ILE ILE A . n A 1 81 THR 81 98 98 THR THR A . n A 1 82 ASP 82 99 99 ASP ASP A . n A 1 83 SER 83 100 100 SER SER A . n A 1 84 ASP 84 101 101 ASP ASP A . n A 1 85 VAL 85 102 102 VAL VAL A . n A 1 86 LYS 86 103 103 LYS LYS A . n A 1 87 GLY 87 104 104 GLY GLY A . n A 1 88 ASP 88 105 105 ASP ASP A . n A 1 89 LEU 89 106 106 LEU LEU A . n A 1 90 PHE 90 107 107 PHE PHE A . n A 1 91 VAL 91 108 108 VAL VAL A . n A 1 92 LYS 92 109 109 LYS LYS A . n A 1 93 GLU 93 110 110 GLU GLU A . n A 1 94 LEU 94 111 111 LEU LEU A . n A 1 95 PHE 95 112 112 PHE PHE A . n A 1 96 TRP 96 113 113 TRP TRP A . n A 1 97 MET 97 114 114 MET MET A . n A 1 98 LEU 98 115 115 LEU LEU A . n A 1 99 HIS 99 116 116 HIS HIS A . n A 1 100 LEU 100 117 117 LEU LEU A . n A 1 101 GLN 101 118 118 GLN GLN A . n A 1 102 LYS 102 119 119 LYS LYS A . n A 1 103 GLU 103 120 120 GLU GLU A . n A 1 104 THR 104 121 121 THR THR A . n A 1 105 PHE 105 122 122 PHE PHE A . n A 1 106 ALA 106 123 123 ALA ALA A . n A 1 107 THR 107 124 124 THR THR A . n A 1 108 TYR 108 125 125 TYR TYR A . n A 1 109 VAL 109 126 126 VAL VAL A . n A 1 110 ALA 110 127 127 ALA ALA A . n A 1 111 ARG 111 128 128 ARG ARG A . n A 1 112 PHE 112 129 129 PHE PHE A . n A 1 113 GLN 113 130 130 GLN GLN A . n A 1 114 LYS 114 131 131 LYS LYS A . n A 1 115 GLU 115 132 132 GLU GLU A . n A 1 116 ALA 116 133 133 ALA ALA A . n A 1 117 TYR 117 134 134 TYR TYR A . n A 1 118 CYS 118 135 135 CYS CYS A . n A 1 119 PRO 119 136 136 PRO PRO A . n A 1 120 ASN 120 137 137 ASN ASN A . n A 1 121 LYS 121 138 138 LYS LYS A . n A 1 122 CYS 122 139 139 CYS CYS A . n A 1 123 GLY 123 140 140 GLY GLY A . n A 1 124 VAL 124 141 141 VAL VAL A . n A 1 125 MET 125 142 142 MET MET A . n A 1 126 LEU 126 143 143 LEU LEU A . n A 1 127 GLN 127 144 144 GLN GLN A . n A 1 128 THR 128 145 145 THR THR A . n A 1 129 LEU 129 146 146 LEU LEU A . n A 1 130 ILE 130 147 147 ILE ILE A . n A 1 131 TRP 131 148 148 TRP TRP A . n A 1 132 CYS 132 149 149 CYS CYS A . n A 1 133 LYS 133 150 150 LYS LYS A . n A 1 134 ASN 134 151 151 ASN ASN A . n A 1 135 CYS 135 152 152 CYS CYS A . n A 1 136 LYS 136 153 153 LYS LYS A . n A 1 137 LYS 137 154 154 LYS LYS A . n A 1 138 GLU 138 155 155 GLU GLU A . n A 1 139 VAL 139 156 156 VAL VAL A . n A 1 140 HIS 140 157 157 HIS HIS A . n A 1 141 ALA 141 158 158 ALA ALA A . n A 1 142 CYS 142 159 159 CYS CYS A . n A 1 143 ARG 143 160 160 ARG ARG A . n A 1 144 LYS 144 161 161 LYS LYS A . n A 1 145 SER 145 162 162 SER SER A . n A 1 146 TYR 146 163 163 TYR TYR A . n A 1 147 ASP 147 164 164 ASP ASP A . n A 1 148 CYS 148 165 165 CYS CYS A . n A 1 149 GLY 149 166 166 GLY GLY A . n A 1 150 GLU 150 167 167 GLU GLU A . n A 1 151 ARG 151 168 168 ARG ARG A . n A 1 152 ASN 152 169 169 ASN ASN A . n A 1 153 VAL 153 170 170 VAL VAL A . n A 1 154 GLU 154 171 171 GLU GLU A . n A 1 155 VAL 155 172 172 VAL VAL A . n A 1 156 PRO 156 173 173 PRO PRO A . n A 1 157 GLN 157 174 174 GLN GLN A . n A 1 158 MET 158 175 175 MET MET A . n A 1 159 GLU 159 176 176 GLU GLU A . n A 1 160 ASP 160 177 177 ASP ASP A . n A 1 161 MET 161 178 178 MET MET A . n A 1 162 ILE 162 179 179 ILE ILE A . n A 1 163 LEU 163 180 180 LEU LEU A . n A 1 164 ASP 164 181 181 ASP ASP A . n A 1 165 CYS 165 182 182 CYS CYS A . n A 1 166 GLU 166 183 183 GLU GLU A . n A 1 167 LEU 167 184 184 LEU LEU A . n A 1 168 ASN 168 185 185 ASN ASN A . n A 1 169 TRP 169 186 186 TRP TRP A . n A 1 170 HIS 170 187 187 HIS HIS A . n A 1 171 GLN 171 188 188 GLN GLN A . n A 1 172 ALA 172 189 189 ALA ALA A . n A 1 173 SER 173 190 190 SER SER A . n A 1 174 GLU 174 191 191 GLU GLU A . n A 1 175 GLY 175 192 192 GLY GLY A . n A 1 176 LEU 176 193 193 LEU LEU A . n A 1 177 THR 177 194 194 THR THR A . n A 1 178 ASP 178 195 195 ASP ASP A . n A 1 179 TYR 179 196 196 TYR TYR A . n A 1 180 SER 180 197 197 SER SER A . n A 1 181 PHE 181 198 198 PHE PHE A . n A 1 182 TYR 182 199 199 TYR TYR A . n A 1 183 ARG 183 200 200 ARG ARG A . n A 1 184 VAL 184 201 201 VAL VAL A . n A 1 185 TRP 185 202 202 TRP TRP A . n A 1 186 GLY 186 203 203 GLY GLY A . n A 1 187 ASN 187 204 204 ASN ASN A . n A 1 188 ASN 188 205 205 ASN ASN A . n A 1 189 THR 189 206 206 THR THR A . n A 1 190 GLU 190 207 207 GLU GLU A . n A 1 191 THR 191 208 208 THR THR A . n A 1 192 LEU 192 209 209 LEU LEU A . n A 1 193 VAL 193 210 210 VAL VAL A . n A 1 194 SER 194 211 211 SER SER A . n A 1 195 LYS 195 212 212 LYS LYS A . n A 1 196 GLY 196 213 213 GLY GLY A . n A 1 197 LYS 197 214 214 LYS LYS A . n A 1 198 GLU 198 215 215 GLU GLU A . n A 1 199 ALA 199 216 216 ALA ALA A . n A 1 200 THR 200 217 217 THR THR A . n A 1 201 LEU 201 218 218 LEU LEU A . n A 1 202 THR 202 219 219 THR THR A . n A 1 203 LYS 203 220 220 LYS LYS A . n A 1 204 PRO 204 221 221 PRO PRO A . n A 1 205 MET 205 222 222 MET MET A . n A 1 206 VAL 206 223 223 VAL VAL A . n A 1 207 GLY 207 224 224 GLY GLY A . n A 1 208 PRO 208 225 225 PRO PRO A . n A 1 209 GLU 209 226 226 GLU GLU A . n A 1 210 ASP 210 227 227 ASP ASP A . n A 1 211 ALA 211 228 228 ALA ALA A . n A 1 212 GLY 212 229 229 GLY GLY A . n A 1 213 SER 213 230 230 SER SER A . n A 1 214 TYR 214 231 231 TYR TYR A . n A 1 215 ARG 215 232 232 ARG ARG A . n A 1 216 CYS 216 233 233 CYS CYS A . n A 1 217 GLU 217 234 234 GLU GLU A . n A 1 218 LEU 218 235 235 LEU LEU A . n A 1 219 GLY 219 236 236 GLY GLY A . n A 1 220 SER 220 237 237 SER SER A . n A 1 221 VAL 221 238 238 VAL VAL A . n A 1 222 ASN 222 239 239 ASN ASN A . n A 1 223 SER 223 240 240 SER SER A . n A 1 224 SER 224 241 241 SER SER A . n A 1 225 PRO 225 242 242 PRO PRO A . n A 1 226 ALA 226 243 243 ALA ALA A . n A 1 227 THR 227 244 244 THR THR A . n A 1 228 ILE 228 245 245 ILE ILE A . n A 1 229 ILE 229 246 246 ILE ILE A . n A 1 230 ASN 230 247 247 ASN ASN A . n A 1 231 PHE 231 248 248 PHE PHE A . n A 1 232 HIS 232 249 249 HIS HIS A . n A 1 233 VAL 233 250 250 VAL VAL A . n A 1 234 THR 234 251 251 THR THR A . n A 1 235 VAL 235 252 252 VAL VAL A . n A 1 236 LEU 236 253 253 LEU LEU A . n A 1 237 PRO 237 254 254 PRO PRO A . n A 1 238 LYS 238 255 ? ? ? A . n A 1 239 GLU 239 256 ? ? ? A . n A 1 240 PHE 240 257 ? ? ? A . n A 1 241 LEU 241 258 ? ? ? A . n A 1 242 GLU 242 259 ? ? ? A . n A 1 243 VAL 243 260 ? ? ? A . n A 1 244 LEU 244 261 ? ? ? A . n A 1 245 PHE 245 262 ? ? ? A . n A 1 246 GLN 246 263 ? ? ? A . n B 2 1 ARG 1 16 ? ? ? B . n B 2 2 SER 2 17 ? ? ? B . n B 2 3 PRO 3 18 18 PRO PRO B . n B 2 4 TRP 4 19 19 TRP TRP B . n B 2 5 GLY 5 20 20 GLY GLY B . n B 2 6 ASP 6 21 21 ASP ASP B . n B 2 7 GLU 7 22 22 GLU GLU B . n B 2 8 LEU 8 23 23 LEU LEU B . n B 2 9 LEU 9 24 24 LEU LEU B . n B 2 10 ASN 10 25 25 ASN ASN B . n B 2 11 ILE 11 26 26 ILE ILE B . n B 2 12 CYS 12 27 27 CYS CYS B . n B 2 13 MET 13 28 28 MET MET B . n B 2 14 ASN 14 29 29 ASN ASN B . n B 2 15 ALA 15 30 30 ALA ALA B . n B 2 16 LYS 16 31 31 LYS LYS B . n B 2 17 HIS 17 32 32 HIS HIS B . n B 2 18 HIS 18 33 33 HIS HIS B . n B 2 19 LYS 19 34 34 LYS LYS B . n B 2 20 ARG 20 35 35 ARG ARG B . n B 2 21 VAL 21 36 36 VAL VAL B . n B 2 22 PRO 22 37 37 PRO PRO B . n B 2 23 SER 23 38 38 SER SER B . n B 2 24 PRO 24 39 39 PRO PRO B . n B 2 25 GLU 25 40 40 GLU GLU B . n B 2 26 ASP 26 41 41 ASP ASP B . n B 2 27 LYS 27 42 42 LYS LYS B . n B 2 28 LEU 28 43 43 LEU LEU B . n B 2 29 TYR 29 44 44 TYR TYR B . n B 2 30 GLU 30 45 45 GLU GLU B . n B 2 31 GLU 31 46 46 GLU GLU B . n B 2 32 CYS 32 47 47 CYS CYS B . n B 2 33 ILE 33 48 48 ILE ILE B . n B 2 34 PRO 34 49 49 PRO PRO B . n B 2 35 TRP 35 50 50 TRP TRP B . n B 2 36 LYS 36 51 51 LYS LYS B . n B 2 37 ASP 37 52 52 ASP ASP B . n B 2 38 ASN 38 53 53 ASN ASN B . n B 2 39 ALA 39 54 54 ALA ALA B . n B 2 40 CYS 40 55 55 CYS CYS B . n B 2 41 CYS 41 56 56 CYS CYS B . n B 2 42 THR 42 57 57 THR THR B . n B 2 43 LEU 43 58 58 LEU LEU B . n B 2 44 THR 44 59 59 THR THR B . n B 2 45 THR 45 60 60 THR THR B . n B 2 46 SER 46 61 61 SER SER B . n B 2 47 TRP 47 62 62 TRP TRP B . n B 2 48 GLU 48 63 63 GLU GLU B . n B 2 49 ALA 49 64 64 ALA ALA B . n B 2 50 HIS 50 65 65 HIS HIS B . n B 2 51 LEU 51 66 66 LEU LEU B . n B 2 52 ASP 52 67 67 ASP ASP B . n B 2 53 VAL 53 68 68 VAL VAL B . n B 2 54 SER 54 69 69 SER SER B . n B 2 55 PRO 55 70 70 PRO PRO B . n B 2 56 LEU 56 71 71 LEU LEU B . n B 2 57 TYR 57 72 72 TYR TYR B . n B 2 58 ASN 58 73 73 ASN ASN B . n B 2 59 PHE 59 74 74 PHE PHE B . n B 2 60 SER 60 75 75 SER SER B . n B 2 61 LEU 61 76 76 LEU LEU B . n B 2 62 PHE 62 77 77 PHE PHE B . n B 2 63 HIS 63 78 78 HIS HIS B . n B 2 64 CYS 64 79 79 CYS CYS B . n B 2 65 GLY 65 80 80 GLY GLY B . n B 2 66 LEU 66 81 81 LEU LEU B . n B 2 67 LEU 67 82 82 LEU LEU B . n B 2 68 MET 68 83 83 MET MET B . n B 2 69 PRO 69 84 84 PRO PRO B . n B 2 70 GLY 70 85 85 GLY GLY B . n B 2 71 CYS 71 86 86 CYS CYS B . n B 2 72 ARG 72 87 87 ARG ARG B . n B 2 73 LYS 73 88 88 LYS LYS B . n B 2 74 HIS 74 89 89 HIS HIS B . n B 2 75 PHE 75 90 90 PHE PHE B . n B 2 76 ILE 76 91 91 ILE ILE B . n B 2 77 GLN 77 92 92 GLN GLN B . n B 2 78 ALA 78 93 93 ALA ALA B . n B 2 79 ILE 79 94 94 ILE ILE B . n B 2 80 CYS 80 95 95 CYS CYS B . n B 2 81 PHE 81 96 96 PHE PHE B . n B 2 82 TYR 82 97 97 TYR TYR B . n B 2 83 GLU 83 98 98 GLU GLU B . n B 2 84 CYS 84 99 99 CYS CYS B . n B 2 85 SER 85 100 100 SER SER B . n B 2 86 PRO 86 101 101 PRO PRO B . n B 2 87 ASN 87 102 102 ASN ASN B . n B 2 88 LEU 88 103 103 LEU LEU B . n B 2 89 GLY 89 104 104 GLY GLY B . n B 2 90 PRO 90 105 105 PRO PRO B . n B 2 91 TRP 91 106 106 TRP TRP B . n B 2 92 ILE 92 107 107 ILE ILE B . n B 2 93 GLN 93 108 108 GLN GLN B . n B 2 94 PRO 94 109 109 PRO PRO B . n B 2 95 VAL 95 110 110 VAL VAL B . n B 2 96 GLY 96 111 ? ? ? B . n B 2 97 SER 97 112 ? ? ? B . n B 2 98 LEU 98 113 ? ? ? B . n B 2 99 GLY 99 114 ? ? ? B . n B 2 100 TRP 100 115 ? ? ? B . n B 2 101 GLU 101 116 ? ? ? B . n B 2 102 VAL 102 117 ? ? ? B . n B 2 103 ALA 103 118 ? ? ? B . n B 2 104 PRO 104 119 ? ? ? B . n B 2 105 SER 105 120 ? ? ? B . n B 2 106 GLY 106 121 ? ? ? B . n B 2 107 GLN 107 122 ? ? ? B . n B 2 108 GLY 108 123 123 GLY GLY B . n B 2 109 GLU 109 124 124 GLU GLU B . n B 2 110 ARG 110 125 125 ARG ARG B . n B 2 111 VAL 111 126 126 VAL VAL B . n B 2 112 VAL 112 127 127 VAL VAL B . n B 2 113 ASN 113 128 128 ASN ASN B . n B 2 114 VAL 114 129 129 VAL VAL B . n B 2 115 PRO 115 130 130 PRO PRO B . n B 2 116 LEU 116 131 131 LEU LEU B . n B 2 117 CYS 117 132 132 CYS CYS B . n B 2 118 GLN 118 133 133 GLN GLN B . n B 2 119 GLU 119 134 134 GLU GLU B . n B 2 120 ASP 120 135 135 ASP ASP B . n B 2 121 CYS 121 136 136 CYS CYS B . n B 2 122 GLU 122 137 137 GLU GLU B . n B 2 123 GLU 123 138 138 GLU GLU B . n B 2 124 TRP 124 139 139 TRP TRP B . n B 2 125 TRP 125 140 140 TRP TRP B . n B 2 126 GLU 126 141 141 GLU GLU B . n B 2 127 ASP 127 142 142 ASP ASP B . n B 2 128 CYS 128 143 143 CYS CYS B . n B 2 129 ARG 129 144 144 ARG ARG B . n B 2 130 MET 130 145 145 MET MET B . n B 2 131 SER 131 146 146 SER SER B . n B 2 132 TYR 132 147 147 TYR TYR B . n B 2 133 THR 133 148 148 THR THR B . n B 2 134 CYS 134 149 149 CYS CYS B . n B 2 135 LYS 135 150 150 LYS LYS B . n B 2 136 SER 136 151 151 SER SER B . n B 2 137 ASN 137 152 152 ASN ASN B . n B 2 138 TRP 138 153 153 TRP TRP B . n B 2 139 ARG 139 154 154 ARG ARG B . n B 2 140 GLY 140 155 155 GLY GLY B . n B 2 141 GLY 141 156 156 GLY GLY B . n B 2 142 TRP 142 157 157 TRP TRP B . n B 2 143 ASP 143 158 158 ASP ASP B . n B 2 144 TRP 144 159 159 TRP TRP B . n B 2 145 SER 145 160 160 SER SER B . n B 2 146 GLN 146 161 161 GLN GLN B . n B 2 147 GLY 147 162 162 GLY GLY B . n B 2 148 LYS 148 163 163 LYS LYS B . n B 2 149 ASN 149 164 164 ASN ASN B . n B 2 150 ARG 150 165 165 ARG ARG B . n B 2 151 CYS 151 166 166 CYS CYS B . n B 2 152 PRO 152 167 167 PRO PRO B . n B 2 153 LYS 153 168 168 LYS LYS B . n B 2 154 GLY 154 169 169 GLY GLY B . n B 2 155 ALA 155 170 170 ALA ALA B . n B 2 156 GLN 156 171 171 GLN GLN B . n B 2 157 CYS 157 172 172 CYS CYS B . n B 2 158 LEU 158 173 173 LEU LEU B . n B 2 159 PRO 159 174 174 PRO PRO B . n B 2 160 PHE 160 175 175 PHE PHE B . n B 2 161 SER 161 176 176 SER SER B . n B 2 162 HIS 162 177 177 HIS HIS B . n B 2 163 TYR 163 178 178 TYR TYR B . n B 2 164 PHE 164 179 179 PHE PHE B . n B 2 165 PRO 165 180 180 PRO PRO B . n B 2 166 THR 166 181 181 THR THR B . n B 2 167 PRO 167 182 182 PRO PRO B . n B 2 168 ALA 168 183 183 ALA ALA B . n B 2 169 ASP 169 184 184 ASP ASP B . n B 2 170 LEU 170 185 185 LEU LEU B . n B 2 171 CYS 171 186 186 CYS CYS B . n B 2 172 GLU 172 187 187 GLU GLU B . n B 2 173 LYS 173 188 188 LYS LYS B . n B 2 174 THR 174 189 189 THR THR B . n B 2 175 TRP 175 190 190 TRP TRP B . n B 2 176 SER 176 191 191 SER SER B . n B 2 177 ASN 177 192 192 ASN ASN B . n B 2 178 SER 178 193 193 SER SER B . n B 2 179 PHE 179 194 194 PHE PHE B . n B 2 180 LYS 180 195 195 LYS LYS B . n B 2 181 ALA 181 196 196 ALA ALA B . n B 2 182 SER 182 197 197 SER SER B . n B 2 183 PRO 183 198 198 PRO PRO B . n B 2 184 GLU 184 199 199 GLU GLU B . n B 2 185 ARG 185 200 200 ARG ARG B . n B 2 186 ARG 186 201 201 ARG ARG B . n B 2 187 ASN 187 202 202 ASN ASN B . n B 2 188 SER 188 203 203 SER SER B . n B 2 189 GLY 189 204 204 GLY GLY B . n B 2 190 ARG 190 205 205 ARG ARG B . n B 2 191 CYS 191 206 206 CYS CYS B . n B 2 192 LEU 192 207 207 LEU LEU B . n B 2 193 GLN 193 208 208 GLN GLN B . n B 2 194 LYS 194 209 209 LYS LYS B . n B 2 195 TRP 195 210 210 TRP TRP B . n B 2 196 PHE 196 211 211 PHE PHE B . n B 2 197 GLU 197 212 212 GLU GLU B . n B 2 198 PRO 198 213 213 PRO PRO B . n B 2 199 ALA 199 214 214 ALA ALA B . n B 2 200 GLN 200 215 215 GLN GLN B . n B 2 201 GLY 201 216 216 GLY GLY B . n B 2 202 ASN 202 217 217 ASN ASN B . n B 2 203 PRO 203 218 218 PRO PRO B . n B 2 204 ASN 204 219 219 ASN ASN B . n B 2 205 VAL 205 220 220 VAL VAL B . n B 2 206 ALA 206 221 221 ALA ALA B . n B 2 207 VAL 207 222 222 VAL VAL B . n B 2 208 ALA 208 223 223 ALA ALA B . n B 2 209 ARG 209 224 224 ARG ARG B . n B 2 210 LEU 210 225 225 LEU LEU B . n B 2 211 PHE 211 226 226 PHE PHE B . n B 2 212 ALA 212 227 227 ALA ALA B . n B 2 213 SER 213 228 228 SER SER B . n B 2 214 GLU 214 229 229 GLU GLU B . n B 2 215 PHE 215 230 230 PHE PHE B . n B 2 216 LEU 216 231 ? ? ? B . n B 2 217 GLU 217 232 ? ? ? B . n B 2 218 VAL 218 233 ? ? ? B . n B 2 219 LEU 219 234 ? ? ? B . n B 2 220 PHE 220 235 ? ? ? B . n B 2 221 GLN 221 236 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG 1 300 300 NAG NAG A . D 3 NAG 1 301 300 NAG NAG B . E 4 CL 1 302 1 CL CL B . F 5 HOH 1 401 3 HOH HOH A . F 5 HOH 2 402 2 HOH HOH A . F 5 HOH 3 403 1 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2470 ? 1 MORE -14 ? 1 'SSA (A^2)' 22060 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-06-22 2 'Structure model' 1 1 2016-06-29 3 'Structure model' 1 2 2020-02-19 4 'Structure model' 1 3 2020-07-29 5 'Structure model' 1 4 2023-11-08 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Refinement description' 11 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' citation 3 3 'Structure model' diffrn_source 4 3 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' chem_comp 6 4 'Structure model' entity 7 4 'Structure model' pdbx_chem_comp_identifier 8 4 'Structure model' pdbx_entity_nonpoly 9 4 'Structure model' struct_conn 10 4 'Structure model' struct_site 11 4 'Structure model' struct_site_gen 12 5 'Structure model' chem_comp 13 5 'Structure model' chem_comp_atom 14 5 'Structure model' chem_comp_bond 15 5 'Structure model' database_2 16 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.type' 2 3 'Structure model' '_citation.journal_id_CSD' 3 3 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 4 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 5 4 'Structure model' '_chem_comp.name' 6 4 'Structure model' '_entity.pdbx_description' 7 4 'Structure model' '_pdbx_entity_nonpoly.name' 8 4 'Structure model' '_struct_conn.pdbx_role' 9 5 'Structure model' '_chem_comp.pdbx_synonyms' 10 5 'Structure model' '_database_2.pdbx_DOI' 11 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 36.1337 11.8675 22.4193 0.1446 0.3052 0.2451 0.0912 -0.0192 -0.1396 1.5587 0.2415 0.7333 -0.3145 -0.3576 -0.2336 0.1579 0.1945 0.0287 -0.0192 -0.1533 -0.0032 -0.0917 -0.0334 -0.0046 'X-RAY DIFFRACTION' 2 ? refined 25.6183 -12.2225 7.6791 0.3496 0.0843 0.1739 -0.0235 0.0457 -0.0556 3.4007 1.2352 1.6845 1.6579 0.8978 0.9374 -0.0505 -0.2208 0.0042 0.0845 0.0325 -0.1226 0.4692 -0.0424 0.0180 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 18 ? ? A 254 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 18 ? ? B 230 ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0103 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 63 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OG _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 SER _pdbx_validate_close_contact.auth_seq_id_2 69 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.66 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 152 ? ? 54.90 18.87 2 1 THR A 194 ? ? -121.10 -91.76 3 1 MET A 222 ? ? 38.58 68.77 4 1 GLU B 45 ? ? 39.31 -108.44 5 1 ASN B 53 ? ? -170.66 103.14 6 1 HIS B 78 ? ? -36.22 -29.64 7 1 LEU B 81 ? ? -38.21 126.17 8 1 ARG B 125 ? ? -126.68 -168.22 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 68 ? A SER 51 2 1 Y 1 A LEU 69 ? A LEU 52 3 1 Y 1 A ASN 70 ? A ASN 53 4 1 Y 1 A GLU 71 ? A GLU 54 5 1 Y 1 A ASP 72 ? A ASP 55 6 1 Y 1 A LYS 255 ? A LYS 238 7 1 Y 1 A GLU 256 ? A GLU 239 8 1 Y 1 A PHE 257 ? A PHE 240 9 1 Y 1 A LEU 258 ? A LEU 241 10 1 Y 1 A GLU 259 ? A GLU 242 11 1 Y 1 A VAL 260 ? A VAL 243 12 1 Y 1 A LEU 261 ? A LEU 244 13 1 Y 1 A PHE 262 ? A PHE 245 14 1 Y 1 A GLN 263 ? A GLN 246 15 1 Y 1 B ARG 16 ? B ARG 1 16 1 Y 1 B SER 17 ? B SER 2 17 1 Y 1 B GLY 111 ? B GLY 96 18 1 Y 1 B SER 112 ? B SER 97 19 1 Y 1 B LEU 113 ? B LEU 98 20 1 Y 1 B GLY 114 ? B GLY 99 21 1 Y 1 B TRP 115 ? B TRP 100 22 1 Y 1 B GLU 116 ? B GLU 101 23 1 Y 1 B VAL 117 ? B VAL 102 24 1 Y 1 B ALA 118 ? B ALA 103 25 1 Y 1 B PRO 119 ? B PRO 104 26 1 Y 1 B SER 120 ? B SER 105 27 1 Y 1 B GLY 121 ? B GLY 106 28 1 Y 1 B GLN 122 ? B GLN 107 29 1 Y 1 B LEU 231 ? B LEU 216 30 1 Y 1 B GLU 232 ? B GLU 217 31 1 Y 1 B VAL 233 ? B VAL 218 32 1 Y 1 B LEU 234 ? B LEU 219 33 1 Y 1 B PHE 235 ? B PHE 220 34 1 Y 1 B GLN 236 ? B GLN 221 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 NAG C1 C N R 251 NAG C2 C N R 252 NAG C3 C N R 253 NAG C4 C N S 254 NAG C5 C N R 255 NAG C6 C N N 256 NAG C7 C N N 257 NAG C8 C N N 258 NAG N2 N N N 259 NAG O1 O N N 260 NAG O3 O N N 261 NAG O4 O N N 262 NAG O5 O N N 263 NAG O6 O N N 264 NAG O7 O N N 265 NAG H1 H N N 266 NAG H2 H N N 267 NAG H3 H N N 268 NAG H4 H N N 269 NAG H5 H N N 270 NAG H61 H N N 271 NAG H62 H N N 272 NAG H81 H N N 273 NAG H82 H N N 274 NAG H83 H N N 275 NAG HN2 H N N 276 NAG HO1 H N N 277 NAG HO3 H N N 278 NAG HO4 H N N 279 NAG HO6 H N N 280 PHE N N N N 281 PHE CA C N S 282 PHE C C N N 283 PHE O O N N 284 PHE CB C N N 285 PHE CG C Y N 286 PHE CD1 C Y N 287 PHE CD2 C Y N 288 PHE CE1 C Y N 289 PHE CE2 C Y N 290 PHE CZ C Y N 291 PHE OXT O N N 292 PHE H H N N 293 PHE H2 H N N 294 PHE HA H N N 295 PHE HB2 H N N 296 PHE HB3 H N N 297 PHE HD1 H N N 298 PHE HD2 H N N 299 PHE HE1 H N N 300 PHE HE2 H N N 301 PHE HZ H N N 302 PHE HXT H N N 303 PRO N N N N 304 PRO CA C N S 305 PRO C C N N 306 PRO O O N N 307 PRO CB C N N 308 PRO CG C N N 309 PRO CD C N N 310 PRO OXT O N N 311 PRO H H N N 312 PRO HA H N N 313 PRO HB2 H N N 314 PRO HB3 H N N 315 PRO HG2 H N N 316 PRO HG3 H N N 317 PRO HD2 H N N 318 PRO HD3 H N N 319 PRO HXT H N N 320 SER N N N N 321 SER CA C N S 322 SER C C N N 323 SER O O N N 324 SER CB C N N 325 SER OG O N N 326 SER OXT O N N 327 SER H H N N 328 SER H2 H N N 329 SER HA H N N 330 SER HB2 H N N 331 SER HB3 H N N 332 SER HG H N N 333 SER HXT H N N 334 THR N N N N 335 THR CA C N S 336 THR C C N N 337 THR O O N N 338 THR CB C N R 339 THR OG1 O N N 340 THR CG2 C N N 341 THR OXT O N N 342 THR H H N N 343 THR H2 H N N 344 THR HA H N N 345 THR HB H N N 346 THR HG1 H N N 347 THR HG21 H N N 348 THR HG22 H N N 349 THR HG23 H N N 350 THR HXT H N N 351 TRP N N N N 352 TRP CA C N S 353 TRP C C N N 354 TRP O O N N 355 TRP CB C N N 356 TRP CG C Y N 357 TRP CD1 C Y N 358 TRP CD2 C Y N 359 TRP NE1 N Y N 360 TRP CE2 C Y N 361 TRP CE3 C Y N 362 TRP CZ2 C Y N 363 TRP CZ3 C Y N 364 TRP CH2 C Y N 365 TRP OXT O N N 366 TRP H H N N 367 TRP H2 H N N 368 TRP HA H N N 369 TRP HB2 H N N 370 TRP HB3 H N N 371 TRP HD1 H N N 372 TRP HE1 H N N 373 TRP HE3 H N N 374 TRP HZ2 H N N 375 TRP HZ3 H N N 376 TRP HH2 H N N 377 TRP HXT H N N 378 TYR N N N N 379 TYR CA C N S 380 TYR C C N N 381 TYR O O N N 382 TYR CB C N N 383 TYR CG C Y N 384 TYR CD1 C Y N 385 TYR CD2 C Y N 386 TYR CE1 C Y N 387 TYR CE2 C Y N 388 TYR CZ C Y N 389 TYR OH O N N 390 TYR OXT O N N 391 TYR H H N N 392 TYR H2 H N N 393 TYR HA H N N 394 TYR HB2 H N N 395 TYR HB3 H N N 396 TYR HD1 H N N 397 TYR HD2 H N N 398 TYR HE1 H N N 399 TYR HE2 H N N 400 TYR HH H N N 401 TYR HXT H N N 402 VAL N N N N 403 VAL CA C N S 404 VAL C C N N 405 VAL O O N N 406 VAL CB C N N 407 VAL CG1 C N N 408 VAL CG2 C N N 409 VAL OXT O N N 410 VAL H H N N 411 VAL H2 H N N 412 VAL HA H N N 413 VAL HB H N N 414 VAL HG11 H N N 415 VAL HG12 H N N 416 VAL HG13 H N N 417 VAL HG21 H N N 418 VAL HG22 H N N 419 VAL HG23 H N N 420 VAL HXT H N N 421 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 NAG C1 C2 sing N N 237 NAG C1 O1 sing N N 238 NAG C1 O5 sing N N 239 NAG C1 H1 sing N N 240 NAG C2 C3 sing N N 241 NAG C2 N2 sing N N 242 NAG C2 H2 sing N N 243 NAG C3 C4 sing N N 244 NAG C3 O3 sing N N 245 NAG C3 H3 sing N N 246 NAG C4 C5 sing N N 247 NAG C4 O4 sing N N 248 NAG C4 H4 sing N N 249 NAG C5 C6 sing N N 250 NAG C5 O5 sing N N 251 NAG C5 H5 sing N N 252 NAG C6 O6 sing N N 253 NAG C6 H61 sing N N 254 NAG C6 H62 sing N N 255 NAG C7 C8 sing N N 256 NAG C7 N2 sing N N 257 NAG C7 O7 doub N N 258 NAG C8 H81 sing N N 259 NAG C8 H82 sing N N 260 NAG C8 H83 sing N N 261 NAG N2 HN2 sing N N 262 NAG O1 HO1 sing N N 263 NAG O3 HO3 sing N N 264 NAG O4 HO4 sing N N 265 NAG O6 HO6 sing N N 266 PHE N CA sing N N 267 PHE N H sing N N 268 PHE N H2 sing N N 269 PHE CA C sing N N 270 PHE CA CB sing N N 271 PHE CA HA sing N N 272 PHE C O doub N N 273 PHE C OXT sing N N 274 PHE CB CG sing N N 275 PHE CB HB2 sing N N 276 PHE CB HB3 sing N N 277 PHE CG CD1 doub Y N 278 PHE CG CD2 sing Y N 279 PHE CD1 CE1 sing Y N 280 PHE CD1 HD1 sing N N 281 PHE CD2 CE2 doub Y N 282 PHE CD2 HD2 sing N N 283 PHE CE1 CZ doub Y N 284 PHE CE1 HE1 sing N N 285 PHE CE2 CZ sing Y N 286 PHE CE2 HE2 sing N N 287 PHE CZ HZ sing N N 288 PHE OXT HXT sing N N 289 PRO N CA sing N N 290 PRO N CD sing N N 291 PRO N H sing N N 292 PRO CA C sing N N 293 PRO CA CB sing N N 294 PRO CA HA sing N N 295 PRO C O doub N N 296 PRO C OXT sing N N 297 PRO CB CG sing N N 298 PRO CB HB2 sing N N 299 PRO CB HB3 sing N N 300 PRO CG CD sing N N 301 PRO CG HG2 sing N N 302 PRO CG HG3 sing N N 303 PRO CD HD2 sing N N 304 PRO CD HD3 sing N N 305 PRO OXT HXT sing N N 306 SER N CA sing N N 307 SER N H sing N N 308 SER N H2 sing N N 309 SER CA C sing N N 310 SER CA CB sing N N 311 SER CA HA sing N N 312 SER C O doub N N 313 SER C OXT sing N N 314 SER CB OG sing N N 315 SER CB HB2 sing N N 316 SER CB HB3 sing N N 317 SER OG HG sing N N 318 SER OXT HXT sing N N 319 THR N CA sing N N 320 THR N H sing N N 321 THR N H2 sing N N 322 THR CA C sing N N 323 THR CA CB sing N N 324 THR CA HA sing N N 325 THR C O doub N N 326 THR C OXT sing N N 327 THR CB OG1 sing N N 328 THR CB CG2 sing N N 329 THR CB HB sing N N 330 THR OG1 HG1 sing N N 331 THR CG2 HG21 sing N N 332 THR CG2 HG22 sing N N 333 THR CG2 HG23 sing N N 334 THR OXT HXT sing N N 335 TRP N CA sing N N 336 TRP N H sing N N 337 TRP N H2 sing N N 338 TRP CA C sing N N 339 TRP CA CB sing N N 340 TRP CA HA sing N N 341 TRP C O doub N N 342 TRP C OXT sing N N 343 TRP CB CG sing N N 344 TRP CB HB2 sing N N 345 TRP CB HB3 sing N N 346 TRP CG CD1 doub Y N 347 TRP CG CD2 sing Y N 348 TRP CD1 NE1 sing Y N 349 TRP CD1 HD1 sing N N 350 TRP CD2 CE2 doub Y N 351 TRP CD2 CE3 sing Y N 352 TRP NE1 CE2 sing Y N 353 TRP NE1 HE1 sing N N 354 TRP CE2 CZ2 sing Y N 355 TRP CE3 CZ3 doub Y N 356 TRP CE3 HE3 sing N N 357 TRP CZ2 CH2 doub Y N 358 TRP CZ2 HZ2 sing N N 359 TRP CZ3 CH2 sing Y N 360 TRP CZ3 HZ3 sing N N 361 TRP CH2 HH2 sing N N 362 TRP OXT HXT sing N N 363 TYR N CA sing N N 364 TYR N H sing N N 365 TYR N H2 sing N N 366 TYR CA C sing N N 367 TYR CA CB sing N N 368 TYR CA HA sing N N 369 TYR C O doub N N 370 TYR C OXT sing N N 371 TYR CB CG sing N N 372 TYR CB HB2 sing N N 373 TYR CB HB3 sing N N 374 TYR CG CD1 doub Y N 375 TYR CG CD2 sing Y N 376 TYR CD1 CE1 sing Y N 377 TYR CD1 HD1 sing N N 378 TYR CD2 CE2 doub Y N 379 TYR CD2 HD2 sing N N 380 TYR CE1 CZ doub Y N 381 TYR CE1 HE1 sing N N 382 TYR CE2 CZ sing Y N 383 TYR CE2 HE2 sing N N 384 TYR CZ OH sing N N 385 TYR OH HH sing N N 386 TYR OXT HXT sing N N 387 VAL N CA sing N N 388 VAL N H sing N N 389 VAL N H2 sing N N 390 VAL CA C sing N N 391 VAL CA CB sing N N 392 VAL CA HA sing N N 393 VAL C O doub N N 394 VAL C OXT sing N N 395 VAL CB CG1 sing N N 396 VAL CB CG2 sing N N 397 VAL CB HB sing N N 398 VAL CG1 HG11 sing N N 399 VAL CG1 HG12 sing N N 400 VAL CG1 HG13 sing N N 401 VAL CG2 HG21 sing N N 402 VAL CG2 HG22 sing N N 403 VAL CG2 HG23 sing N N 404 VAL OXT HXT sing N N 405 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 4 'CHLORIDE ION' CL 5 water HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 5JK9 '5JK9, 5JKA' 2 ? 'experimental model' PDB 5JKA '5JK9, 5JKA' #