data_5JRN # _entry.id 5JRN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5JRN pdb_00005jrn 10.2210/pdb5jrn/pdb WWPDB D_1000221121 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-05-24 2 'Structure model' 1 1 2017-09-13 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2024-01-10 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Refinement description' 8 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_audit_support 2 3 'Structure model' atom_site 3 3 'Structure model' atom_site_anisotrop 4 3 'Structure model' chem_comp 5 3 'Structure model' pdbx_chem_comp_identifier 6 3 'Structure model' struct_site 7 3 'Structure model' struct_site_gen 8 4 'Structure model' chem_comp 9 4 'Structure model' chem_comp_atom 10 4 'Structure model' chem_comp_bond 11 4 'Structure model' database_2 12 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_audit_support.funding_organization' 2 3 'Structure model' '_atom_site.auth_atom_id' 3 3 'Structure model' '_atom_site.label_atom_id' 4 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 5 3 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 6 3 'Structure model' '_chem_comp.mon_nstd_flag' 7 3 'Structure model' '_chem_comp.type' 8 4 'Structure model' '_chem_comp.pdbx_synonyms' 9 4 'Structure model' '_database_2.pdbx_DOI' 10 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5JRN _pdbx_database_status.recvd_initial_deposition_date 2016-05-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gomez, S.' 1 'Payne, A.M.' 2 'Savko, M.' 3 'Fox, G.C.' 4 'Shepard, W.E.' 5 'Fernandez, F.J.' 6 'Vega, M.C.' 7 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal Structure of a Xylanase in Complex with a Monosaccharide at 2.84 Angstroem resolution' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gomez, S.' 1 ? primary 'Payne, A.M.' 2 ? primary 'Savko, M.' 3 ? primary 'Fox, G.C.' 4 ? primary 'Shepard, W.E.' 5 ? primary 'Fernandez, F.J.' 6 ? primary 'Vega, M.C.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Endo-1,4-beta-xylanase 21245.049 1 3.2.1.8 ? ? ? 2 non-polymer syn GLYCEROL 92.094 7 ? ? ? ? 3 non-polymer syn 'methyl beta-D-xylopyranoside' 164.156 1 ? ? ? ? 4 water nat water 18.015 21 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GAMDKRTQPTTGTSGGYYFSFWTDTPNSVTYTNGNGGQFSMQWSGNGNHVGGKGWMPGTSRTIKYSGSYNPNGNSYLAVY GWTRNPLIEYYIVENFGTYNPSSGGQKKGEVNVDGSVYDIYVSTRVNAPSIDGNKTFQQYWSVRRNKRSSGSVNTGAHFQ AWKNVGLNLGTHDYQILAVEGYYSSGSASMTVSQ ; _entity_poly.pdbx_seq_one_letter_code_can ;GAMDKRTQPTTGTSGGYYFSFWTDTPNSVTYTNGNGGQFSMQWSGNGNHVGGKGWMPGTSRTIKYSGSYNPNGNSYLAVY GWTRNPLIEYYIVENFGTYNPSSGGQKKGEVNVDGSVYDIYVSTRVNAPSIDGNKTFQQYWSVRRNKRSSGSVNTGAHFQ AWKNVGLNLGTHDYQILAVEGYYSSGSASMTVSQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 'methyl beta-D-xylopyranoside' 6MJ 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 ASP n 1 5 LYS n 1 6 ARG n 1 7 THR n 1 8 GLN n 1 9 PRO n 1 10 THR n 1 11 THR n 1 12 GLY n 1 13 THR n 1 14 SER n 1 15 GLY n 1 16 GLY n 1 17 TYR n 1 18 TYR n 1 19 PHE n 1 20 SER n 1 21 PHE n 1 22 TRP n 1 23 THR n 1 24 ASP n 1 25 THR n 1 26 PRO n 1 27 ASN n 1 28 SER n 1 29 VAL n 1 30 THR n 1 31 TYR n 1 32 THR n 1 33 ASN n 1 34 GLY n 1 35 ASN n 1 36 GLY n 1 37 GLY n 1 38 GLN n 1 39 PHE n 1 40 SER n 1 41 MET n 1 42 GLN n 1 43 TRP n 1 44 SER n 1 45 GLY n 1 46 ASN n 1 47 GLY n 1 48 ASN n 1 49 HIS n 1 50 VAL n 1 51 GLY n 1 52 GLY n 1 53 LYS n 1 54 GLY n 1 55 TRP n 1 56 MET n 1 57 PRO n 1 58 GLY n 1 59 THR n 1 60 SER n 1 61 ARG n 1 62 THR n 1 63 ILE n 1 64 LYS n 1 65 TYR n 1 66 SER n 1 67 GLY n 1 68 SER n 1 69 TYR n 1 70 ASN n 1 71 PRO n 1 72 ASN n 1 73 GLY n 1 74 ASN n 1 75 SER n 1 76 TYR n 1 77 LEU n 1 78 ALA n 1 79 VAL n 1 80 TYR n 1 81 GLY n 1 82 TRP n 1 83 THR n 1 84 ARG n 1 85 ASN n 1 86 PRO n 1 87 LEU n 1 88 ILE n 1 89 GLU n 1 90 TYR n 1 91 TYR n 1 92 ILE n 1 93 VAL n 1 94 GLU n 1 95 ASN n 1 96 PHE n 1 97 GLY n 1 98 THR n 1 99 TYR n 1 100 ASN n 1 101 PRO n 1 102 SER n 1 103 SER n 1 104 GLY n 1 105 GLY n 1 106 GLN n 1 107 LYS n 1 108 LYS n 1 109 GLY n 1 110 GLU n 1 111 VAL n 1 112 ASN n 1 113 VAL n 1 114 ASP n 1 115 GLY n 1 116 SER n 1 117 VAL n 1 118 TYR n 1 119 ASP n 1 120 ILE n 1 121 TYR n 1 122 VAL n 1 123 SER n 1 124 THR n 1 125 ARG n 1 126 VAL n 1 127 ASN n 1 128 ALA n 1 129 PRO n 1 130 SER n 1 131 ILE n 1 132 ASP n 1 133 GLY n 1 134 ASN n 1 135 LYS n 1 136 THR n 1 137 PHE n 1 138 GLN n 1 139 GLN n 1 140 TYR n 1 141 TRP n 1 142 SER n 1 143 VAL n 1 144 ARG n 1 145 ARG n 1 146 ASN n 1 147 LYS n 1 148 ARG n 1 149 SER n 1 150 SER n 1 151 GLY n 1 152 SER n 1 153 VAL n 1 154 ASN n 1 155 THR n 1 156 GLY n 1 157 ALA n 1 158 HIS n 1 159 PHE n 1 160 GLN n 1 161 ALA n 1 162 TRP n 1 163 LYS n 1 164 ASN n 1 165 VAL n 1 166 GLY n 1 167 LEU n 1 168 ASN n 1 169 LEU n 1 170 GLY n 1 171 THR n 1 172 HIS n 1 173 ASP n 1 174 TYR n 1 175 GLN n 1 176 ILE n 1 177 LEU n 1 178 ALA n 1 179 VAL n 1 180 GLU n 1 181 GLY n 1 182 TYR n 1 183 TYR n 1 184 SER n 1 185 SER n 1 186 GLY n 1 187 SER n 1 188 ALA n 1 189 SER n 1 190 MET n 1 191 THR n 1 192 VAL n 1 193 SER n 1 194 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 194 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene FOTG_15646 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Fusarium oxysporum f. sp. vasinfectum 25433' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1089449 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector pETM-11 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 6MJ D-saccharide n 'methyl beta-D-xylopyranoside' 'methyl beta-D-xyloside; methyl D-xyloside; methyl xyloside' 'C6 H12 O5' 164.156 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 6MJ 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 'DXylp[1Me]b' 6MJ 'COMMON NAME' GMML 1.0 1-methyl-b-D-xylopyranose # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -3 ? ? ? A . n A 1 2 ALA 2 -2 ? ? ? A . n A 1 3 MET 3 -1 ? ? ? A . n A 1 4 ASP 4 0 ? ? ? A . n A 1 5 LYS 5 1 ? ? ? A . n A 1 6 ARG 6 2 2 ARG ARG A . n A 1 7 THR 7 3 3 THR THR A . n A 1 8 GLN 8 4 4 GLN GLN A . n A 1 9 PRO 9 5 5 PRO PRO A . n A 1 10 THR 10 6 6 THR THR A . n A 1 11 THR 11 7 7 THR THR A . n A 1 12 GLY 12 8 8 GLY GLY A . n A 1 13 THR 13 9 9 THR THR A . n A 1 14 SER 14 10 10 SER SER A . n A 1 15 GLY 15 11 11 GLY GLY A . n A 1 16 GLY 16 12 12 GLY GLY A . n A 1 17 TYR 17 13 13 TYR TYR A . n A 1 18 TYR 18 14 14 TYR TYR A . n A 1 19 PHE 19 15 15 PHE PHE A . n A 1 20 SER 20 16 16 SER SER A . n A 1 21 PHE 21 17 17 PHE PHE A . n A 1 22 TRP 22 18 18 TRP TRP A . n A 1 23 THR 23 19 19 THR THR A . n A 1 24 ASP 24 20 20 ASP ASP A . n A 1 25 THR 25 21 21 THR THR A . n A 1 26 PRO 26 22 22 PRO PRO A . n A 1 27 ASN 27 23 23 ASN ASN A . n A 1 28 SER 28 24 24 SER SER A . n A 1 29 VAL 29 25 25 VAL VAL A . n A 1 30 THR 30 26 26 THR THR A . n A 1 31 TYR 31 27 27 TYR TYR A . n A 1 32 THR 32 28 28 THR THR A . n A 1 33 ASN 33 29 29 ASN ASN A . n A 1 34 GLY 34 30 30 GLY GLY A . n A 1 35 ASN 35 31 31 ASN ASN A . n A 1 36 GLY 36 32 32 GLY GLY A . n A 1 37 GLY 37 33 33 GLY GLY A . n A 1 38 GLN 38 34 34 GLN GLN A . n A 1 39 PHE 39 35 35 PHE PHE A . n A 1 40 SER 40 36 36 SER SER A . n A 1 41 MET 41 37 37 MET MET A . n A 1 42 GLN 42 38 38 GLN GLN A . n A 1 43 TRP 43 39 39 TRP TRP A . n A 1 44 SER 44 40 40 SER SER A . n A 1 45 GLY 45 41 41 GLY GLY A . n A 1 46 ASN 46 42 42 ASN ASN A . n A 1 47 GLY 47 43 43 GLY GLY A . n A 1 48 ASN 48 44 44 ASN ASN A . n A 1 49 HIS 49 45 45 HIS HIS A . n A 1 50 VAL 50 46 46 VAL VAL A . n A 1 51 GLY 51 47 47 GLY GLY A . n A 1 52 GLY 52 48 48 GLY GLY A . n A 1 53 LYS 53 49 49 LYS LYS A . n A 1 54 GLY 54 50 50 GLY GLY A . n A 1 55 TRP 55 51 51 TRP TRP A . n A 1 56 MET 56 52 52 MET MET A . n A 1 57 PRO 57 53 53 PRO PRO A . n A 1 58 GLY 58 54 54 GLY GLY A . n A 1 59 THR 59 55 55 THR THR A . n A 1 60 SER 60 56 56 SER SER A . n A 1 61 ARG 61 57 57 ARG ARG A . n A 1 62 THR 62 58 58 THR THR A . n A 1 63 ILE 63 59 59 ILE ILE A . n A 1 64 LYS 64 60 60 LYS LYS A . n A 1 65 TYR 65 61 61 TYR TYR A . n A 1 66 SER 66 62 62 SER SER A . n A 1 67 GLY 67 63 63 GLY GLY A . n A 1 68 SER 68 64 64 SER SER A . n A 1 69 TYR 69 65 65 TYR TYR A . n A 1 70 ASN 70 66 66 ASN ASN A . n A 1 71 PRO 71 67 67 PRO PRO A . n A 1 72 ASN 72 68 68 ASN ASN A . n A 1 73 GLY 73 69 69 GLY GLY A . n A 1 74 ASN 74 70 70 ASN ASN A . n A 1 75 SER 75 71 71 SER SER A . n A 1 76 TYR 76 72 72 TYR TYR A . n A 1 77 LEU 77 73 73 LEU LEU A . n A 1 78 ALA 78 74 74 ALA ALA A . n A 1 79 VAL 79 75 75 VAL VAL A . n A 1 80 TYR 80 76 76 TYR TYR A . n A 1 81 GLY 81 77 77 GLY GLY A . n A 1 82 TRP 82 78 78 TRP TRP A . n A 1 83 THR 83 79 79 THR THR A . n A 1 84 ARG 84 80 80 ARG ARG A . n A 1 85 ASN 85 81 81 ASN ASN A . n A 1 86 PRO 86 82 82 PRO PRO A . n A 1 87 LEU 87 83 83 LEU LEU A . n A 1 88 ILE 88 84 84 ILE ILE A . n A 1 89 GLU 89 85 85 GLU GLU A . n A 1 90 TYR 90 86 86 TYR TYR A . n A 1 91 TYR 91 87 87 TYR TYR A . n A 1 92 ILE 92 88 88 ILE ILE A . n A 1 93 VAL 93 89 89 VAL VAL A . n A 1 94 GLU 94 90 90 GLU GLU A . n A 1 95 ASN 95 91 91 ASN ASN A . n A 1 96 PHE 96 92 92 PHE PHE A . n A 1 97 GLY 97 93 93 GLY GLY A . n A 1 98 THR 98 94 94 THR THR A . n A 1 99 TYR 99 95 95 TYR TYR A . n A 1 100 ASN 100 96 96 ASN ASN A . n A 1 101 PRO 101 97 97 PRO PRO A . n A 1 102 SER 102 98 98 SER SER A . n A 1 103 SER 103 99 99 SER SER A . n A 1 104 GLY 104 100 100 GLY GLY A . n A 1 105 GLY 105 101 101 GLY GLY A . n A 1 106 GLN 106 102 102 GLN GLN A . n A 1 107 LYS 107 103 103 LYS LYS A . n A 1 108 LYS 108 104 104 LYS LYS A . n A 1 109 GLY 109 105 105 GLY GLY A . n A 1 110 GLU 110 106 106 GLU GLU A . n A 1 111 VAL 111 107 107 VAL VAL A . n A 1 112 ASN 112 108 108 ASN ASN A . n A 1 113 VAL 113 109 109 VAL VAL A . n A 1 114 ASP 114 110 110 ASP ASP A . n A 1 115 GLY 115 111 111 GLY GLY A . n A 1 116 SER 116 112 112 SER SER A . n A 1 117 VAL 117 113 113 VAL VAL A . n A 1 118 TYR 118 114 114 TYR TYR A . n A 1 119 ASP 119 115 115 ASP ASP A . n A 1 120 ILE 120 116 116 ILE ILE A . n A 1 121 TYR 121 117 117 TYR TYR A . n A 1 122 VAL 122 118 118 VAL VAL A . n A 1 123 SER 123 119 119 SER SER A . n A 1 124 THR 124 120 120 THR THR A . n A 1 125 ARG 125 121 121 ARG ARG A . n A 1 126 VAL 126 122 122 VAL VAL A . n A 1 127 ASN 127 123 123 ASN ASN A . n A 1 128 ALA 128 124 124 ALA ALA A . n A 1 129 PRO 129 125 125 PRO PRO A . n A 1 130 SER 130 126 126 SER SER A . n A 1 131 ILE 131 127 127 ILE ILE A . n A 1 132 ASP 132 128 128 ASP ASP A . n A 1 133 GLY 133 129 129 GLY GLY A . n A 1 134 ASN 134 130 130 ASN ASN A . n A 1 135 LYS 135 131 131 LYS LYS A . n A 1 136 THR 136 132 132 THR THR A . n A 1 137 PHE 137 133 133 PHE PHE A . n A 1 138 GLN 138 134 134 GLN GLN A . n A 1 139 GLN 139 135 135 GLN GLN A . n A 1 140 TYR 140 136 136 TYR TYR A . n A 1 141 TRP 141 137 137 TRP TRP A . n A 1 142 SER 142 138 138 SER SER A . n A 1 143 VAL 143 139 139 VAL VAL A . n A 1 144 ARG 144 140 140 ARG ARG A . n A 1 145 ARG 145 141 141 ARG ARG A . n A 1 146 ASN 146 142 142 ASN ASN A . n A 1 147 LYS 147 143 143 LYS LYS A . n A 1 148 ARG 148 144 144 ARG ARG A . n A 1 149 SER 149 145 145 SER SER A . n A 1 150 SER 150 146 146 SER SER A . n A 1 151 GLY 151 147 147 GLY GLY A . n A 1 152 SER 152 148 148 SER SER A . n A 1 153 VAL 153 149 149 VAL VAL A . n A 1 154 ASN 154 150 150 ASN ASN A . n A 1 155 THR 155 151 151 THR THR A . n A 1 156 GLY 156 152 152 GLY GLY A . n A 1 157 ALA 157 153 153 ALA ALA A . n A 1 158 HIS 158 154 154 HIS HIS A . n A 1 159 PHE 159 155 155 PHE PHE A . n A 1 160 GLN 160 156 156 GLN GLN A . n A 1 161 ALA 161 157 157 ALA ALA A . n A 1 162 TRP 162 158 158 TRP TRP A . n A 1 163 LYS 163 159 159 LYS LYS A . n A 1 164 ASN 164 160 160 ASN ASN A . n A 1 165 VAL 165 161 161 VAL VAL A . n A 1 166 GLY 166 162 162 GLY GLY A . n A 1 167 LEU 167 163 163 LEU LEU A . n A 1 168 ASN 168 164 164 ASN ASN A . n A 1 169 LEU 169 165 165 LEU LEU A . n A 1 170 GLY 170 166 166 GLY GLY A . n A 1 171 THR 171 167 167 THR THR A . n A 1 172 HIS 172 168 168 HIS HIS A . n A 1 173 ASP 173 169 169 ASP ASP A . n A 1 174 TYR 174 170 170 TYR TYR A . n A 1 175 GLN 175 171 171 GLN GLN A . n A 1 176 ILE 176 172 172 ILE ILE A . n A 1 177 LEU 177 173 173 LEU LEU A . n A 1 178 ALA 178 174 174 ALA ALA A . n A 1 179 VAL 179 175 175 VAL VAL A . n A 1 180 GLU 180 176 176 GLU GLU A . n A 1 181 GLY 181 177 177 GLY GLY A . n A 1 182 TYR 182 178 178 TYR TYR A . n A 1 183 TYR 183 179 179 TYR TYR A . n A 1 184 SER 184 180 180 SER SER A . n A 1 185 SER 185 181 181 SER SER A . n A 1 186 GLY 186 182 182 GLY GLY A . n A 1 187 SER 187 183 183 SER SER A . n A 1 188 ALA 188 184 184 ALA ALA A . n A 1 189 SER 189 185 185 SER SER A . n A 1 190 MET 190 186 186 MET MET A . n A 1 191 THR 191 187 187 THR THR A . n A 1 192 VAL 192 188 188 VAL VAL A . n A 1 193 SER 193 189 189 SER SER A . n A 1 194 GLN 194 190 190 GLN GLN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 201 1 GOL GOL A . C 2 GOL 1 202 2 GOL GOL A . D 2 GOL 1 203 3 GOL GOL A . E 2 GOL 1 204 4 GOL GOL A . F 2 GOL 1 205 5 GOL GOL A . G 2 GOL 1 206 7 GOL GOL A . H 2 GOL 1 207 8 GOL GOL A . I 3 6MJ 1 208 1 6MJ MBX A . J 4 HOH 1 301 14 HOH HOH A . J 4 HOH 2 302 20 HOH HOH A . J 4 HOH 3 303 5 HOH HOH A . J 4 HOH 4 304 9 HOH HOH A . J 4 HOH 5 305 1 HOH HOH A . J 4 HOH 6 306 23 HOH HOH A . J 4 HOH 7 307 18 HOH HOH A . J 4 HOH 8 308 4 HOH HOH A . J 4 HOH 9 309 16 HOH HOH A . J 4 HOH 10 310 15 HOH HOH A . J 4 HOH 11 311 22 HOH HOH A . J 4 HOH 12 312 11 HOH HOH A . J 4 HOH 13 313 8 HOH HOH A . J 4 HOH 14 314 19 HOH HOH A . J 4 HOH 15 315 17 HOH HOH A . J 4 HOH 16 316 2 HOH HOH A . J 4 HOH 17 317 10 HOH HOH A . J 4 HOH 18 318 3 HOH HOH A . J 4 HOH 19 319 7 HOH HOH A . J 4 HOH 20 320 6 HOH HOH A . J 4 HOH 21 321 13 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.8.4_1496 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 'November 3, 2014' 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.25 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.6.0 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5JRN _cell.details ? _cell.formula_units_Z ? _cell.length_a 105.700 _cell.length_a_esd ? _cell.length_b 36.100 _cell.length_b_esd ? _cell.length_c 48.800 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JRN _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5JRN _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.20 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 44.04 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M sodium citrate pH 5, varying ammonium sulfate concentrations' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details 'Channel-cut Si(111) + KB focusing mirrors' _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-10-25 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Channel-cut Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98009 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALBA BEAMLINE XALOC' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.98009 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline XALOC _diffrn_source.pdbx_synchrotron_site ALBA # _reflns.B_iso_Wilson_estimate 35.89 _reflns.entry_id 5JRN _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.84 _reflns.d_resolution_low 48.8 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 4766 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F -3 _reflns.observed_criterion_sigma_I -3 _reflns.percent_possible_obs 100.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.1 _reflns.pdbx_Rmerge_I_obs 0.252 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.96 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.989 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.84 _reflns_shell.d_res_low 2.94 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.73 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.884 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 8.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 38.35 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5JRN _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.841 _refine.ls_d_res_low 48.800 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 4760 _refine.ls_number_reflns_R_free 239 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.79 _refine.ls_percent_reflns_R_free 5.02 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2100 _refine.ls_R_factor_R_free 0.2264 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2092 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.37 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5JRM _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details 0 _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.02 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.22 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1468 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 53 _refine_hist.number_atoms_solvent 21 _refine_hist.number_atoms_total 1542 _refine_hist.d_res_high 2.841 _refine_hist.d_res_low 48.800 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.002 ? 1563 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.891 ? 2116 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 14.278 ? 540 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.027 ? 209 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 ? 272 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.8406 3.5786 . . 116 2204 100.00 . . . 0.2493 . 0.2585 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5786 48.8072 . . 123 2317 100.00 . . . 0.2116 . 0.1800 . . . . . . . . . . # _struct.entry_id 5JRN _struct.title 'Crystal Structure of a Xylanase in Complex with a Monosaccharide at 2.84 Angstroem resolution' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5JRN _struct_keywords.text 'Xylanase, Complex, GH11, Hydrolase' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 3 ? J N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code X0M5X0_FUSOX _struct_ref.pdbx_db_accession X0M5X0 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DKRTQPTTGTSGGYYFSFWTDTPNSVTYTNGNGGQFSMQWSGNGNHVGGKGWMPGTSRTIKYSGSYNPNGNSYLAVYGWT RNPLIEYYIVENFGTYNPSSGGQKKGEVNVDGSVYDIYVSTRVNAPSIDGNKTFQQYWSVRRNKRSSGSVNTGAHFQAWK NVGLNLGTHDYQILAVEGYYSSGSASMTVSQ ; _struct_ref.pdbx_align_begin 42 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5JRN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 194 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession X0M5X0 _struct_ref_seq.db_align_beg 42 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 232 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 0 _struct_ref_seq.pdbx_auth_seq_align_end 190 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5JRN GLY A 1 ? UNP X0M5X0 ? ? 'expression tag' -3 1 1 5JRN ALA A 2 ? UNP X0M5X0 ? ? 'expression tag' -2 2 1 5JRN MET A 3 ? UNP X0M5X0 ? ? 'expression tag' -1 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1190 ? 1 MORE 3 ? 1 'SSA (A^2)' 8530 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id THR _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 155 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id VAL _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 165 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id THR _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 151 _struct_conf.end_auth_comp_id VAL _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 161 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 MET 56 A . ? MET 52 A PRO 57 A ? PRO 53 A 1 -1.17 2 ASN 85 A . ? ASN 81 A PRO 86 A ? PRO 82 A 1 2.70 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 9 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? parallel AA1 7 8 ? anti-parallel AA1 8 9 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 10 ? SER A 14 ? THR A 6 SER A 10 AA1 2 TYR A 17 ? THR A 23 ? TYR A 13 THR A 19 AA1 3 ASN A 48 ? TRP A 55 ? ASN A 44 TRP A 51 AA1 4 THR A 171 ? TYR A 182 ? THR A 167 TYR A 178 AA1 5 SER A 75 ? ARG A 84 ? SER A 71 ARG A 80 AA1 6 ILE A 88 ? PHE A 96 ? ILE A 84 PHE A 92 AA1 7 GLY A 133 ? ARG A 144 ? GLY A 129 ARG A 140 AA1 8 SER A 116 ? SER A 130 ? SER A 112 SER A 126 AA1 9 GLN A 106 ? VAL A 113 ? GLN A 102 VAL A 109 AA2 1 VAL A 29 ? ASN A 33 ? VAL A 25 ASN A 29 AA2 2 GLN A 38 ? TRP A 43 ? GLN A 34 TRP A 39 AA2 3 SER A 185 ? SER A 193 ? SER A 181 SER A 189 AA2 4 THR A 62 ? ASN A 72 ? THR A 58 ASN A 68 AA2 5 GLY A 151 ? ASN A 154 ? GLY A 147 ASN A 150 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER A 14 ? N SER A 10 O TYR A 17 ? O TYR A 13 AA1 2 3 N TRP A 22 ? N TRP A 18 O VAL A 50 ? O VAL A 46 AA1 3 4 N LYS A 53 ? N LYS A 49 O LEU A 177 ? O LEU A 173 AA1 4 5 O ASP A 173 ? O ASP A 169 N TRP A 82 ? N TRP A 78 AA1 5 6 N LEU A 77 ? N LEU A 73 O ASN A 95 ? O ASN A 91 AA1 6 7 N VAL A 93 ? N VAL A 89 O ARG A 144 ? O ARG A 140 AA1 7 8 O LYS A 135 ? O LYS A 131 N ALA A 128 ? N ALA A 124 AA1 8 9 O ILE A 120 ? O ILE A 116 N LYS A 108 ? N LYS A 104 AA2 1 2 N THR A 32 ? N THR A 28 O SER A 40 ? O SER A 36 AA2 2 3 N TRP A 43 ? N TRP A 39 O GLY A 186 ? O GLY A 182 AA2 3 4 O SER A 185 ? O SER A 181 N ASN A 72 ? N ASN A 68 AA2 4 5 N TYR A 65 ? N TYR A 61 O GLY A 151 ? O GLY A 147 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 THR _pdbx_validate_rmsd_angle.auth_seq_id_1 94 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 C _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 THR _pdbx_validate_rmsd_angle.auth_seq_id_2 94 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 TYR _pdbx_validate_rmsd_angle.auth_seq_id_3 95 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 101.40 _pdbx_validate_rmsd_angle.angle_target_value 117.20 _pdbx_validate_rmsd_angle.angle_deviation -15.80 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.20 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 81 ? ? 52.09 73.66 2 1 THR A 94 ? ? -25.62 -78.15 3 1 ASP A 169 ? ? -99.56 -136.02 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id THR _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 94 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 13.50 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -3 ? A GLY 1 2 1 Y 1 A ALA -2 ? A ALA 2 3 1 Y 1 A MET -1 ? A MET 3 4 1 Y 1 A ASP 0 ? A ASP 4 5 1 Y 1 A LYS 1 ? A LYS 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 6MJ C01 C N N 1 6MJ O1 O N N 2 6MJ C1 C N R 3 6MJ C2 C N R 4 6MJ C3 C N S 5 6MJ C4 C N R 6 6MJ C5 C N N 7 6MJ O5 O N N 8 6MJ O4 O N N 9 6MJ O3 O N N 10 6MJ O2 O N N 11 6MJ H1A H N N 12 6MJ H2A H N N 13 6MJ H3A H N N 14 6MJ H1 H N N 15 6MJ H2 H N N 16 6MJ H3 H N N 17 6MJ H4 H N N 18 6MJ H51 H N N 19 6MJ H52 H N N 20 6MJ HO4 H N N 21 6MJ HO3 H N N 22 6MJ HO2 H N N 23 ALA N N N N 24 ALA CA C N S 25 ALA C C N N 26 ALA O O N N 27 ALA CB C N N 28 ALA OXT O N N 29 ALA H H N N 30 ALA H2 H N N 31 ALA HA H N N 32 ALA HB1 H N N 33 ALA HB2 H N N 34 ALA HB3 H N N 35 ALA HXT H N N 36 ARG N N N N 37 ARG CA C N S 38 ARG C C N N 39 ARG O O N N 40 ARG CB C N N 41 ARG CG C N N 42 ARG CD C N N 43 ARG NE N N N 44 ARG CZ C N N 45 ARG NH1 N N N 46 ARG NH2 N N N 47 ARG OXT O N N 48 ARG H H N N 49 ARG H2 H N N 50 ARG HA H N N 51 ARG HB2 H N N 52 ARG HB3 H N N 53 ARG HG2 H N N 54 ARG HG3 H N N 55 ARG HD2 H N N 56 ARG HD3 H N N 57 ARG HE H N N 58 ARG HH11 H N N 59 ARG HH12 H N N 60 ARG HH21 H N N 61 ARG HH22 H N N 62 ARG HXT H N N 63 ASN N N N N 64 ASN CA C N S 65 ASN C C N N 66 ASN O O N N 67 ASN CB C N N 68 ASN CG C N N 69 ASN OD1 O N N 70 ASN ND2 N N N 71 ASN OXT O N N 72 ASN H H N N 73 ASN H2 H N N 74 ASN HA H N N 75 ASN HB2 H N N 76 ASN HB3 H N N 77 ASN HD21 H N N 78 ASN HD22 H N N 79 ASN HXT H N N 80 ASP N N N N 81 ASP CA C N S 82 ASP C C N N 83 ASP O O N N 84 ASP CB C N N 85 ASP CG C N N 86 ASP OD1 O N N 87 ASP OD2 O N N 88 ASP OXT O N N 89 ASP H H N N 90 ASP H2 H N N 91 ASP HA H N N 92 ASP HB2 H N N 93 ASP HB3 H N N 94 ASP HD2 H N N 95 ASP HXT H N N 96 GLN N N N N 97 GLN CA C N S 98 GLN C C N N 99 GLN O O N N 100 GLN CB C N N 101 GLN CG C N N 102 GLN CD C N N 103 GLN OE1 O N N 104 GLN NE2 N N N 105 GLN OXT O N N 106 GLN H H N N 107 GLN H2 H N N 108 GLN HA H N N 109 GLN HB2 H N N 110 GLN HB3 H N N 111 GLN HG2 H N N 112 GLN HG3 H N N 113 GLN HE21 H N N 114 GLN HE22 H N N 115 GLN HXT H N N 116 GLU N N N N 117 GLU CA C N S 118 GLU C C N N 119 GLU O O N N 120 GLU CB C N N 121 GLU CG C N N 122 GLU CD C N N 123 GLU OE1 O N N 124 GLU OE2 O N N 125 GLU OXT O N N 126 GLU H H N N 127 GLU H2 H N N 128 GLU HA H N N 129 GLU HB2 H N N 130 GLU HB3 H N N 131 GLU HG2 H N N 132 GLU HG3 H N N 133 GLU HE2 H N N 134 GLU HXT H N N 135 GLY N N N N 136 GLY CA C N N 137 GLY C C N N 138 GLY O O N N 139 GLY OXT O N N 140 GLY H H N N 141 GLY H2 H N N 142 GLY HA2 H N N 143 GLY HA3 H N N 144 GLY HXT H N N 145 GOL C1 C N N 146 GOL O1 O N N 147 GOL C2 C N N 148 GOL O2 O N N 149 GOL C3 C N N 150 GOL O3 O N N 151 GOL H11 H N N 152 GOL H12 H N N 153 GOL HO1 H N N 154 GOL H2 H N N 155 GOL HO2 H N N 156 GOL H31 H N N 157 GOL H32 H N N 158 GOL HO3 H N N 159 HIS N N N N 160 HIS CA C N S 161 HIS C C N N 162 HIS O O N N 163 HIS CB C N N 164 HIS CG C Y N 165 HIS ND1 N Y N 166 HIS CD2 C Y N 167 HIS CE1 C Y N 168 HIS NE2 N Y N 169 HIS OXT O N N 170 HIS H H N N 171 HIS H2 H N N 172 HIS HA H N N 173 HIS HB2 H N N 174 HIS HB3 H N N 175 HIS HD1 H N N 176 HIS HD2 H N N 177 HIS HE1 H N N 178 HIS HE2 H N N 179 HIS HXT H N N 180 HOH O O N N 181 HOH H1 H N N 182 HOH H2 H N N 183 ILE N N N N 184 ILE CA C N S 185 ILE C C N N 186 ILE O O N N 187 ILE CB C N S 188 ILE CG1 C N N 189 ILE CG2 C N N 190 ILE CD1 C N N 191 ILE OXT O N N 192 ILE H H N N 193 ILE H2 H N N 194 ILE HA H N N 195 ILE HB H N N 196 ILE HG12 H N N 197 ILE HG13 H N N 198 ILE HG21 H N N 199 ILE HG22 H N N 200 ILE HG23 H N N 201 ILE HD11 H N N 202 ILE HD12 H N N 203 ILE HD13 H N N 204 ILE HXT H N N 205 LEU N N N N 206 LEU CA C N S 207 LEU C C N N 208 LEU O O N N 209 LEU CB C N N 210 LEU CG C N N 211 LEU CD1 C N N 212 LEU CD2 C N N 213 LEU OXT O N N 214 LEU H H N N 215 LEU H2 H N N 216 LEU HA H N N 217 LEU HB2 H N N 218 LEU HB3 H N N 219 LEU HG H N N 220 LEU HD11 H N N 221 LEU HD12 H N N 222 LEU HD13 H N N 223 LEU HD21 H N N 224 LEU HD22 H N N 225 LEU HD23 H N N 226 LEU HXT H N N 227 LYS N N N N 228 LYS CA C N S 229 LYS C C N N 230 LYS O O N N 231 LYS CB C N N 232 LYS CG C N N 233 LYS CD C N N 234 LYS CE C N N 235 LYS NZ N N N 236 LYS OXT O N N 237 LYS H H N N 238 LYS H2 H N N 239 LYS HA H N N 240 LYS HB2 H N N 241 LYS HB3 H N N 242 LYS HG2 H N N 243 LYS HG3 H N N 244 LYS HD2 H N N 245 LYS HD3 H N N 246 LYS HE2 H N N 247 LYS HE3 H N N 248 LYS HZ1 H N N 249 LYS HZ2 H N N 250 LYS HZ3 H N N 251 LYS HXT H N N 252 MET N N N N 253 MET CA C N S 254 MET C C N N 255 MET O O N N 256 MET CB C N N 257 MET CG C N N 258 MET SD S N N 259 MET CE C N N 260 MET OXT O N N 261 MET H H N N 262 MET H2 H N N 263 MET HA H N N 264 MET HB2 H N N 265 MET HB3 H N N 266 MET HG2 H N N 267 MET HG3 H N N 268 MET HE1 H N N 269 MET HE2 H N N 270 MET HE3 H N N 271 MET HXT H N N 272 PHE N N N N 273 PHE CA C N S 274 PHE C C N N 275 PHE O O N N 276 PHE CB C N N 277 PHE CG C Y N 278 PHE CD1 C Y N 279 PHE CD2 C Y N 280 PHE CE1 C Y N 281 PHE CE2 C Y N 282 PHE CZ C Y N 283 PHE OXT O N N 284 PHE H H N N 285 PHE H2 H N N 286 PHE HA H N N 287 PHE HB2 H N N 288 PHE HB3 H N N 289 PHE HD1 H N N 290 PHE HD2 H N N 291 PHE HE1 H N N 292 PHE HE2 H N N 293 PHE HZ H N N 294 PHE HXT H N N 295 PRO N N N N 296 PRO CA C N S 297 PRO C C N N 298 PRO O O N N 299 PRO CB C N N 300 PRO CG C N N 301 PRO CD C N N 302 PRO OXT O N N 303 PRO H H N N 304 PRO HA H N N 305 PRO HB2 H N N 306 PRO HB3 H N N 307 PRO HG2 H N N 308 PRO HG3 H N N 309 PRO HD2 H N N 310 PRO HD3 H N N 311 PRO HXT H N N 312 SER N N N N 313 SER CA C N S 314 SER C C N N 315 SER O O N N 316 SER CB C N N 317 SER OG O N N 318 SER OXT O N N 319 SER H H N N 320 SER H2 H N N 321 SER HA H N N 322 SER HB2 H N N 323 SER HB3 H N N 324 SER HG H N N 325 SER HXT H N N 326 THR N N N N 327 THR CA C N S 328 THR C C N N 329 THR O O N N 330 THR CB C N R 331 THR OG1 O N N 332 THR CG2 C N N 333 THR OXT O N N 334 THR H H N N 335 THR H2 H N N 336 THR HA H N N 337 THR HB H N N 338 THR HG1 H N N 339 THR HG21 H N N 340 THR HG22 H N N 341 THR HG23 H N N 342 THR HXT H N N 343 TRP N N N N 344 TRP CA C N S 345 TRP C C N N 346 TRP O O N N 347 TRP CB C N N 348 TRP CG C Y N 349 TRP CD1 C Y N 350 TRP CD2 C Y N 351 TRP NE1 N Y N 352 TRP CE2 C Y N 353 TRP CE3 C Y N 354 TRP CZ2 C Y N 355 TRP CZ3 C Y N 356 TRP CH2 C Y N 357 TRP OXT O N N 358 TRP H H N N 359 TRP H2 H N N 360 TRP HA H N N 361 TRP HB2 H N N 362 TRP HB3 H N N 363 TRP HD1 H N N 364 TRP HE1 H N N 365 TRP HE3 H N N 366 TRP HZ2 H N N 367 TRP HZ3 H N N 368 TRP HH2 H N N 369 TRP HXT H N N 370 TYR N N N N 371 TYR CA C N S 372 TYR C C N N 373 TYR O O N N 374 TYR CB C N N 375 TYR CG C Y N 376 TYR CD1 C Y N 377 TYR CD2 C Y N 378 TYR CE1 C Y N 379 TYR CE2 C Y N 380 TYR CZ C Y N 381 TYR OH O N N 382 TYR OXT O N N 383 TYR H H N N 384 TYR H2 H N N 385 TYR HA H N N 386 TYR HB2 H N N 387 TYR HB3 H N N 388 TYR HD1 H N N 389 TYR HD2 H N N 390 TYR HE1 H N N 391 TYR HE2 H N N 392 TYR HH H N N 393 TYR HXT H N N 394 VAL N N N N 395 VAL CA C N S 396 VAL C C N N 397 VAL O O N N 398 VAL CB C N N 399 VAL CG1 C N N 400 VAL CG2 C N N 401 VAL OXT O N N 402 VAL H H N N 403 VAL H2 H N N 404 VAL HA H N N 405 VAL HB H N N 406 VAL HG11 H N N 407 VAL HG12 H N N 408 VAL HG13 H N N 409 VAL HG21 H N N 410 VAL HG22 H N N 411 VAL HG23 H N N 412 VAL HXT H N N 413 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6MJ O2 C2 sing N N 1 6MJ O3 C3 sing N N 2 6MJ C2 C3 sing N N 3 6MJ C2 C1 sing N N 4 6MJ O1 C01 sing N N 5 6MJ O1 C1 sing N N 6 6MJ C3 C4 sing N N 7 6MJ C1 O5 sing N N 8 6MJ C4 O4 sing N N 9 6MJ C4 C5 sing N N 10 6MJ O5 C5 sing N N 11 6MJ C01 H1A sing N N 12 6MJ C01 H2A sing N N 13 6MJ C01 H3A sing N N 14 6MJ C1 H1 sing N N 15 6MJ C2 H2 sing N N 16 6MJ C3 H3 sing N N 17 6MJ C4 H4 sing N N 18 6MJ C5 H51 sing N N 19 6MJ C5 H52 sing N N 20 6MJ O4 HO4 sing N N 21 6MJ O3 HO3 sing N N 22 6MJ O2 HO2 sing N N 23 ALA N CA sing N N 24 ALA N H sing N N 25 ALA N H2 sing N N 26 ALA CA C sing N N 27 ALA CA CB sing N N 28 ALA CA HA sing N N 29 ALA C O doub N N 30 ALA C OXT sing N N 31 ALA CB HB1 sing N N 32 ALA CB HB2 sing N N 33 ALA CB HB3 sing N N 34 ALA OXT HXT sing N N 35 ARG N CA sing N N 36 ARG N H sing N N 37 ARG N H2 sing N N 38 ARG CA C sing N N 39 ARG CA CB sing N N 40 ARG CA HA sing N N 41 ARG C O doub N N 42 ARG C OXT sing N N 43 ARG CB CG sing N N 44 ARG CB HB2 sing N N 45 ARG CB HB3 sing N N 46 ARG CG CD sing N N 47 ARG CG HG2 sing N N 48 ARG CG HG3 sing N N 49 ARG CD NE sing N N 50 ARG CD HD2 sing N N 51 ARG CD HD3 sing N N 52 ARG NE CZ sing N N 53 ARG NE HE sing N N 54 ARG CZ NH1 sing N N 55 ARG CZ NH2 doub N N 56 ARG NH1 HH11 sing N N 57 ARG NH1 HH12 sing N N 58 ARG NH2 HH21 sing N N 59 ARG NH2 HH22 sing N N 60 ARG OXT HXT sing N N 61 ASN N CA sing N N 62 ASN N H sing N N 63 ASN N H2 sing N N 64 ASN CA C sing N N 65 ASN CA CB sing N N 66 ASN CA HA sing N N 67 ASN C O doub N N 68 ASN C OXT sing N N 69 ASN CB CG sing N N 70 ASN CB HB2 sing N N 71 ASN CB HB3 sing N N 72 ASN CG OD1 doub N N 73 ASN CG ND2 sing N N 74 ASN ND2 HD21 sing N N 75 ASN ND2 HD22 sing N N 76 ASN OXT HXT sing N N 77 ASP N CA sing N N 78 ASP N H sing N N 79 ASP N H2 sing N N 80 ASP CA C sing N N 81 ASP CA CB sing N N 82 ASP CA HA sing N N 83 ASP C O doub N N 84 ASP C OXT sing N N 85 ASP CB CG sing N N 86 ASP CB HB2 sing N N 87 ASP CB HB3 sing N N 88 ASP CG OD1 doub N N 89 ASP CG OD2 sing N N 90 ASP OD2 HD2 sing N N 91 ASP OXT HXT sing N N 92 GLN N CA sing N N 93 GLN N H sing N N 94 GLN N H2 sing N N 95 GLN CA C sing N N 96 GLN CA CB sing N N 97 GLN CA HA sing N N 98 GLN C O doub N N 99 GLN C OXT sing N N 100 GLN CB CG sing N N 101 GLN CB HB2 sing N N 102 GLN CB HB3 sing N N 103 GLN CG CD sing N N 104 GLN CG HG2 sing N N 105 GLN CG HG3 sing N N 106 GLN CD OE1 doub N N 107 GLN CD NE2 sing N N 108 GLN NE2 HE21 sing N N 109 GLN NE2 HE22 sing N N 110 GLN OXT HXT sing N N 111 GLU N CA sing N N 112 GLU N H sing N N 113 GLU N H2 sing N N 114 GLU CA C sing N N 115 GLU CA CB sing N N 116 GLU CA HA sing N N 117 GLU C O doub N N 118 GLU C OXT sing N N 119 GLU CB CG sing N N 120 GLU CB HB2 sing N N 121 GLU CB HB3 sing N N 122 GLU CG CD sing N N 123 GLU CG HG2 sing N N 124 GLU CG HG3 sing N N 125 GLU CD OE1 doub N N 126 GLU CD OE2 sing N N 127 GLU OE2 HE2 sing N N 128 GLU OXT HXT sing N N 129 GLY N CA sing N N 130 GLY N H sing N N 131 GLY N H2 sing N N 132 GLY CA C sing N N 133 GLY CA HA2 sing N N 134 GLY CA HA3 sing N N 135 GLY C O doub N N 136 GLY C OXT sing N N 137 GLY OXT HXT sing N N 138 GOL C1 O1 sing N N 139 GOL C1 C2 sing N N 140 GOL C1 H11 sing N N 141 GOL C1 H12 sing N N 142 GOL O1 HO1 sing N N 143 GOL C2 O2 sing N N 144 GOL C2 C3 sing N N 145 GOL C2 H2 sing N N 146 GOL O2 HO2 sing N N 147 GOL C3 O3 sing N N 148 GOL C3 H31 sing N N 149 GOL C3 H32 sing N N 150 GOL O3 HO3 sing N N 151 HIS N CA sing N N 152 HIS N H sing N N 153 HIS N H2 sing N N 154 HIS CA C sing N N 155 HIS CA CB sing N N 156 HIS CA HA sing N N 157 HIS C O doub N N 158 HIS C OXT sing N N 159 HIS CB CG sing N N 160 HIS CB HB2 sing N N 161 HIS CB HB3 sing N N 162 HIS CG ND1 sing Y N 163 HIS CG CD2 doub Y N 164 HIS ND1 CE1 doub Y N 165 HIS ND1 HD1 sing N N 166 HIS CD2 NE2 sing Y N 167 HIS CD2 HD2 sing N N 168 HIS CE1 NE2 sing Y N 169 HIS CE1 HE1 sing N N 170 HIS NE2 HE2 sing N N 171 HIS OXT HXT sing N N 172 HOH O H1 sing N N 173 HOH O H2 sing N N 174 ILE N CA sing N N 175 ILE N H sing N N 176 ILE N H2 sing N N 177 ILE CA C sing N N 178 ILE CA CB sing N N 179 ILE CA HA sing N N 180 ILE C O doub N N 181 ILE C OXT sing N N 182 ILE CB CG1 sing N N 183 ILE CB CG2 sing N N 184 ILE CB HB sing N N 185 ILE CG1 CD1 sing N N 186 ILE CG1 HG12 sing N N 187 ILE CG1 HG13 sing N N 188 ILE CG2 HG21 sing N N 189 ILE CG2 HG22 sing N N 190 ILE CG2 HG23 sing N N 191 ILE CD1 HD11 sing N N 192 ILE CD1 HD12 sing N N 193 ILE CD1 HD13 sing N N 194 ILE OXT HXT sing N N 195 LEU N CA sing N N 196 LEU N H sing N N 197 LEU N H2 sing N N 198 LEU CA C sing N N 199 LEU CA CB sing N N 200 LEU CA HA sing N N 201 LEU C O doub N N 202 LEU C OXT sing N N 203 LEU CB CG sing N N 204 LEU CB HB2 sing N N 205 LEU CB HB3 sing N N 206 LEU CG CD1 sing N N 207 LEU CG CD2 sing N N 208 LEU CG HG sing N N 209 LEU CD1 HD11 sing N N 210 LEU CD1 HD12 sing N N 211 LEU CD1 HD13 sing N N 212 LEU CD2 HD21 sing N N 213 LEU CD2 HD22 sing N N 214 LEU CD2 HD23 sing N N 215 LEU OXT HXT sing N N 216 LYS N CA sing N N 217 LYS N H sing N N 218 LYS N H2 sing N N 219 LYS CA C sing N N 220 LYS CA CB sing N N 221 LYS CA HA sing N N 222 LYS C O doub N N 223 LYS C OXT sing N N 224 LYS CB CG sing N N 225 LYS CB HB2 sing N N 226 LYS CB HB3 sing N N 227 LYS CG CD sing N N 228 LYS CG HG2 sing N N 229 LYS CG HG3 sing N N 230 LYS CD CE sing N N 231 LYS CD HD2 sing N N 232 LYS CD HD3 sing N N 233 LYS CE NZ sing N N 234 LYS CE HE2 sing N N 235 LYS CE HE3 sing N N 236 LYS NZ HZ1 sing N N 237 LYS NZ HZ2 sing N N 238 LYS NZ HZ3 sing N N 239 LYS OXT HXT sing N N 240 MET N CA sing N N 241 MET N H sing N N 242 MET N H2 sing N N 243 MET CA C sing N N 244 MET CA CB sing N N 245 MET CA HA sing N N 246 MET C O doub N N 247 MET C OXT sing N N 248 MET CB CG sing N N 249 MET CB HB2 sing N N 250 MET CB HB3 sing N N 251 MET CG SD sing N N 252 MET CG HG2 sing N N 253 MET CG HG3 sing N N 254 MET SD CE sing N N 255 MET CE HE1 sing N N 256 MET CE HE2 sing N N 257 MET CE HE3 sing N N 258 MET OXT HXT sing N N 259 PHE N CA sing N N 260 PHE N H sing N N 261 PHE N H2 sing N N 262 PHE CA C sing N N 263 PHE CA CB sing N N 264 PHE CA HA sing N N 265 PHE C O doub N N 266 PHE C OXT sing N N 267 PHE CB CG sing N N 268 PHE CB HB2 sing N N 269 PHE CB HB3 sing N N 270 PHE CG CD1 doub Y N 271 PHE CG CD2 sing Y N 272 PHE CD1 CE1 sing Y N 273 PHE CD1 HD1 sing N N 274 PHE CD2 CE2 doub Y N 275 PHE CD2 HD2 sing N N 276 PHE CE1 CZ doub Y N 277 PHE CE1 HE1 sing N N 278 PHE CE2 CZ sing Y N 279 PHE CE2 HE2 sing N N 280 PHE CZ HZ sing N N 281 PHE OXT HXT sing N N 282 PRO N CA sing N N 283 PRO N CD sing N N 284 PRO N H sing N N 285 PRO CA C sing N N 286 PRO CA CB sing N N 287 PRO CA HA sing N N 288 PRO C O doub N N 289 PRO C OXT sing N N 290 PRO CB CG sing N N 291 PRO CB HB2 sing N N 292 PRO CB HB3 sing N N 293 PRO CG CD sing N N 294 PRO CG HG2 sing N N 295 PRO CG HG3 sing N N 296 PRO CD HD2 sing N N 297 PRO CD HD3 sing N N 298 PRO OXT HXT sing N N 299 SER N CA sing N N 300 SER N H sing N N 301 SER N H2 sing N N 302 SER CA C sing N N 303 SER CA CB sing N N 304 SER CA HA sing N N 305 SER C O doub N N 306 SER C OXT sing N N 307 SER CB OG sing N N 308 SER CB HB2 sing N N 309 SER CB HB3 sing N N 310 SER OG HG sing N N 311 SER OXT HXT sing N N 312 THR N CA sing N N 313 THR N H sing N N 314 THR N H2 sing N N 315 THR CA C sing N N 316 THR CA CB sing N N 317 THR CA HA sing N N 318 THR C O doub N N 319 THR C OXT sing N N 320 THR CB OG1 sing N N 321 THR CB CG2 sing N N 322 THR CB HB sing N N 323 THR OG1 HG1 sing N N 324 THR CG2 HG21 sing N N 325 THR CG2 HG22 sing N N 326 THR CG2 HG23 sing N N 327 THR OXT HXT sing N N 328 TRP N CA sing N N 329 TRP N H sing N N 330 TRP N H2 sing N N 331 TRP CA C sing N N 332 TRP CA CB sing N N 333 TRP CA HA sing N N 334 TRP C O doub N N 335 TRP C OXT sing N N 336 TRP CB CG sing N N 337 TRP CB HB2 sing N N 338 TRP CB HB3 sing N N 339 TRP CG CD1 doub Y N 340 TRP CG CD2 sing Y N 341 TRP CD1 NE1 sing Y N 342 TRP CD1 HD1 sing N N 343 TRP CD2 CE2 doub Y N 344 TRP CD2 CE3 sing Y N 345 TRP NE1 CE2 sing Y N 346 TRP NE1 HE1 sing N N 347 TRP CE2 CZ2 sing Y N 348 TRP CE3 CZ3 doub Y N 349 TRP CE3 HE3 sing N N 350 TRP CZ2 CH2 doub Y N 351 TRP CZ2 HZ2 sing N N 352 TRP CZ3 CH2 sing Y N 353 TRP CZ3 HZ3 sing N N 354 TRP CH2 HH2 sing N N 355 TRP OXT HXT sing N N 356 TYR N CA sing N N 357 TYR N H sing N N 358 TYR N H2 sing N N 359 TYR CA C sing N N 360 TYR CA CB sing N N 361 TYR CA HA sing N N 362 TYR C O doub N N 363 TYR C OXT sing N N 364 TYR CB CG sing N N 365 TYR CB HB2 sing N N 366 TYR CB HB3 sing N N 367 TYR CG CD1 doub Y N 368 TYR CG CD2 sing Y N 369 TYR CD1 CE1 sing Y N 370 TYR CD1 HD1 sing N N 371 TYR CD2 CE2 doub Y N 372 TYR CD2 HD2 sing N N 373 TYR CE1 CZ doub Y N 374 TYR CE1 HE1 sing N N 375 TYR CE2 CZ sing Y N 376 TYR CE2 HE2 sing N N 377 TYR CZ OH sing N N 378 TYR OH HH sing N N 379 TYR OXT HXT sing N N 380 VAL N CA sing N N 381 VAL N H sing N N 382 VAL N H2 sing N N 383 VAL CA C sing N N 384 VAL CA CB sing N N 385 VAL CA HA sing N N 386 VAL C O doub N N 387 VAL C OXT sing N N 388 VAL CB CG1 sing N N 389 VAL CB CG2 sing N N 390 VAL CB HB sing N N 391 VAL CG1 HG11 sing N N 392 VAL CG1 HG12 sing N N 393 VAL CG1 HG13 sing N N 394 VAL CG2 HG21 sing N N 395 VAL CG2 HG22 sing N N 396 VAL CG2 HG23 sing N N 397 VAL OXT HXT sing N N 398 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Spanish Ministry of Economy and Competitiveness' Spain PET2008_0101 1 'Spanish Ministry of Economy and Competitiveness' Spain BIO2009-11184 2 'Spanish Ministry of Economy and Competitiveness' Spain BFU2010-22260-C02-2 3 'Spanish Ministry of Economy and Competitiveness' Spain CTQ2015-66206-C2-2-R 4 'European Union' Spain 'ComplexINC No. 279039' 5 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5JRM _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5JRN _atom_sites.fract_transf_matrix[1][1] 0.009461 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027701 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020492 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_