data_5K0I # _entry.id 5K0I # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5K0I WWPDB D_1000221532 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5K0I _pdbx_database_status.recvd_initial_deposition_date 2016-05-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Luz, J.G.' 1 'Kuklish, S.L.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Bioorg.Med.Chem.Lett. _citation.journal_id_ASTM BMCLE8 _citation.journal_id_CSD 1127 _citation.journal_id_ISSN 1464-3405 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 26 _citation.language ? _citation.page_first 4824 _citation.page_last 4828 _citation.title 'Characterization of 3,3-dimethyl substituted N-aryl piperidines as potent microsomal prostaglandin E synthase-1 inhibitors.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.bmcl.2016.08.023 _citation.pdbx_database_id_PubMed 27554445 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kuklish, S.L.' 1 ? primary 'Antonysamy, S.' 2 ? primary 'Bhattachar, S.N.' 3 ? primary 'Chandrasekhar, S.' 4 ? primary 'Fisher, M.J.' 5 ? primary 'Fretland, A.J.' 6 ? primary 'Gooding, K.' 7 ? primary 'Harvey, A.' 8 ? primary 'Hughes, N.E.' 9 ? primary 'Luz, J.G.' 10 ? primary 'Manninen, P.R.' 11 ? primary 'McGee, J.E.' 12 ? primary 'Navarro, A.' 13 ? primary 'Norman, B.H.' 14 ? primary 'Partridge, K.M.' 15 ? primary 'Quimby, S.J.' 16 ? primary 'Schiffler, M.A.' 17 ? primary 'Sloan, A.V.' 18 ? primary 'Warshawsky, A.M.' 19 ? primary 'York, J.S.' 20 ? primary 'Yu, X.P.' 21 ? # _cell.entry_id 5K0I _cell.length_a 77.444 _cell.length_b 77.444 _cell.length_c 123.565 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5K0I _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Prostaglandin E synthase' 17323.559 1 5.3.99.3 ? ? ? 2 non-polymer syn '1,5-anhydro-2,3,4-trideoxy-3-{[(4S)-3,3-dimethyl-1-(8-methylquinolin-2-yl)piperidine-4-carbonyl]amino}-D-erythro-hexitol' 411.537 1 ? ? ? ? 3 non-polymer syn GLUTATHIONE 307.323 1 ? ? ? ? 4 non-polymer man 'octyl beta-D-glucopyranoside' 292.369 2 ? ? ? ? 5 non-polymer syn 'TETRAETHYLENE GLYCOL' 194.226 2 ? ? ? ? 6 water nat water 18.015 133 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Microsomal glutathione S-transferase 1-like 1,MGST1-L1,Microsomal prostaglandin E synthase 1,MPGES-1,p53-induced gene 12 protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MALPAHSLVMSSPALPAFLLCSTLLVIKMYVVAIITGQVRLRKKAFANPEDALRHGGPQY(CSO)RSDPDVERCLRAHRN DMETIYPFLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAYLGKLRAPIRSVTYTLAQLPCASMALQILWEAARHL ; _entity_poly.pdbx_seq_one_letter_code_can ;MALPAHSLVMSSPALPAFLLCSTLLVIKMYVVAIITGQVRLRKKAFANPEDALRHGGPQYCRSDPDVERCLRAHRNDMET IYPFLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAYLGKLRAPIRSVTYTLAQLPCASMALQILWEAARHL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 LEU n 1 4 PRO n 1 5 ALA n 1 6 HIS n 1 7 SER n 1 8 LEU n 1 9 VAL n 1 10 MET n 1 11 SER n 1 12 SER n 1 13 PRO n 1 14 ALA n 1 15 LEU n 1 16 PRO n 1 17 ALA n 1 18 PHE n 1 19 LEU n 1 20 LEU n 1 21 CYS n 1 22 SER n 1 23 THR n 1 24 LEU n 1 25 LEU n 1 26 VAL n 1 27 ILE n 1 28 LYS n 1 29 MET n 1 30 TYR n 1 31 VAL n 1 32 VAL n 1 33 ALA n 1 34 ILE n 1 35 ILE n 1 36 THR n 1 37 GLY n 1 38 GLN n 1 39 VAL n 1 40 ARG n 1 41 LEU n 1 42 ARG n 1 43 LYS n 1 44 LYS n 1 45 ALA n 1 46 PHE n 1 47 ALA n 1 48 ASN n 1 49 PRO n 1 50 GLU n 1 51 ASP n 1 52 ALA n 1 53 LEU n 1 54 ARG n 1 55 HIS n 1 56 GLY n 1 57 GLY n 1 58 PRO n 1 59 GLN n 1 60 TYR n 1 61 CSO n 1 62 ARG n 1 63 SER n 1 64 ASP n 1 65 PRO n 1 66 ASP n 1 67 VAL n 1 68 GLU n 1 69 ARG n 1 70 CYS n 1 71 LEU n 1 72 ARG n 1 73 ALA n 1 74 HIS n 1 75 ARG n 1 76 ASN n 1 77 ASP n 1 78 MET n 1 79 GLU n 1 80 THR n 1 81 ILE n 1 82 TYR n 1 83 PRO n 1 84 PHE n 1 85 LEU n 1 86 PHE n 1 87 LEU n 1 88 GLY n 1 89 PHE n 1 90 VAL n 1 91 TYR n 1 92 SER n 1 93 PHE n 1 94 LEU n 1 95 GLY n 1 96 PRO n 1 97 ASN n 1 98 PRO n 1 99 PHE n 1 100 VAL n 1 101 ALA n 1 102 TRP n 1 103 MET n 1 104 HIS n 1 105 PHE n 1 106 LEU n 1 107 VAL n 1 108 PHE n 1 109 LEU n 1 110 VAL n 1 111 GLY n 1 112 ARG n 1 113 VAL n 1 114 ALA n 1 115 HIS n 1 116 THR n 1 117 VAL n 1 118 ALA n 1 119 TYR n 1 120 LEU n 1 121 GLY n 1 122 LYS n 1 123 LEU n 1 124 ARG n 1 125 ALA n 1 126 PRO n 1 127 ILE n 1 128 ARG n 1 129 SER n 1 130 VAL n 1 131 THR n 1 132 TYR n 1 133 THR n 1 134 LEU n 1 135 ALA n 1 136 GLN n 1 137 LEU n 1 138 PRO n 1 139 CYS n 1 140 ALA n 1 141 SER n 1 142 MET n 1 143 ALA n 1 144 LEU n 1 145 GLN n 1 146 ILE n 1 147 LEU n 1 148 TRP n 1 149 GLU n 1 150 ALA n 1 151 ALA n 1 152 ARG n 1 153 HIS n 1 154 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 154 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PTGES, MGST1L1, MPGES1, PGES, PIG12' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PTGES_HUMAN _struct_ref.pdbx_db_accession O14684 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PAHSLVMSSPALPAFLLCSTLLVIKMYVVAIITGQVRLRKKAFANPEDALRHGGPQYCRSDPDVERCLRAHRNDMETIYP FLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAYLGKLRAPIRSVTYTLAQLPCASMALQILWEAARHL ; _struct_ref.pdbx_align_begin 2 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5K0I _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 154 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O14684 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 152 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 152 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5K0I MET A 1 ? UNP O14684 ? ? 'initiating methionine' -1 1 1 5K0I ALA A 2 ? UNP O14684 ? ? 'expression tag' 0 2 1 5K0I LEU A 3 ? UNP O14684 ? ? 'expression tag' 1 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 6PW non-polymer . '1,5-anhydro-2,3,4-trideoxy-3-{[(4S)-3,3-dimethyl-1-(8-methylquinolin-2-yl)piperidine-4-carbonyl]amino}-D-erythro-hexitol' ? 'C24 H33 N3 O3' 411.537 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BOG D-saccharide n 'octyl beta-D-glucopyranoside' ? 'C14 H28 O6' 292.369 CSO 'L-peptide linking' n S-HYDROXYCYSTEINE ? 'C3 H7 N O3 S' 137.158 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GSH non-polymer . GLUTATHIONE ? 'C10 H17 N3 O6 S' 307.323 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PG4 non-polymer . 'TETRAETHYLENE GLYCOL' ? 'C8 H18 O5' 194.226 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5K0I _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 4.12 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 70.12 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M tris pH 9.4, 36% PEG 1K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 78 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX-225' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-08-20 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength .97931 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 31-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list .97931 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 31-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5K0I _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.26 _reflns.d_resolution_low 19.65 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 74628 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 6.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high . _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5K0I _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 64481 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.65 _refine.ls_d_res_high 1.30 _refine.ls_percent_reflns_obs 99.92 _refine.ls_R_factor_obs 0.14619 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.14549 _refine.ls_R_factor_R_free 0.15917 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 3447 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.974 _refine.correlation_coeff_Fo_to_Fc_free 0.969 _refine.B_iso_mean 20.208 _refine.aniso_B[1][1] 0.16 _refine.aniso_B[2][2] 0.16 _refine.aniso_B[3][3] -0.23 _refine.aniso_B[1][2] 0.08 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.033 _refine.pdbx_overall_ESU_R_Free 0.032 _refine.overall_SU_ML 0.018 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 0.963 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1172 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 110 _refine_hist.number_atoms_solvent 133 _refine_hist.number_atoms_total 1415 _refine_hist.d_res_high 1.30 _refine_hist.d_res_low 19.65 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.021 ? 1400 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.042 2.000 ? 1907 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 10.457 5.060 ? 167 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.913 20.980 ? 51 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.895 15.000 ? 212 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.713 15.000 ? 11 'X-RAY DIFFRACTION' ? r_chiral_restr 0.061 0.200 ? 211 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.021 ? 1016 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.933 3.000 ? 792 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 3.172 5.000 ? 1293 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 5.298 8.000 ? 608 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 7.249 11.000 ? 609 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 2.015 3.000 ? 1400 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.300 _refine_ls_shell.d_res_low 1.334 _refine_ls_shell.number_reflns_R_work 4769 _refine_ls_shell.R_factor_R_work 0.301 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.320 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 239 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 5K0I _struct.title 'mpges1 bound to an inhibitor' _struct.pdbx_descriptor 'Prostaglandin E synthase (E.C.5.3.99.3)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5K0I _struct_keywords.text 'mpges1, inhibitor, pain, inflammation, Isomerase-Isomerase Inhibitor complex' _struct_keywords.pdbx_keywords 'Isomerase/Isomerase Inhibitor' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 7 ? SER A 11 ? SER A 5 SER A 9 5 ? 5 HELX_P HELX_P2 AA2 ALA A 14 ? LYS A 43 ? ALA A 12 LYS A 41 1 ? 30 HELX_P HELX_P3 AA3 ASN A 48 ? HIS A 55 ? ASN A 46 HIS A 53 1 ? 8 HELX_P HELX_P4 AA4 GLY A 56 ? CSO A 61 ? GLY A 54 CSO A 59 5 ? 6 HELX_P HELX_P5 AA5 ASP A 64 ? PHE A 93 ? ASP A 62 PHE A 91 1 ? 30 HELX_P HELX_P6 AA6 ASN A 97 ? GLY A 121 ? ASN A 95 GLY A 119 1 ? 25 HELX_P HELX_P7 AA7 PRO A 126 ? HIS A 153 ? PRO A 124 HIS A 151 1 ? 28 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A TYR 60 C ? ? ? 1_555 A CSO 61 N ? ? A TYR 58 A CSO 59 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale2 covale both ? A CSO 61 C ? ? ? 1_555 A ARG 62 N ? ? A CSO 59 A ARG 60 1_555 ? ? ? ? ? ? ? 1.331 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ALA _struct_mon_prot_cis.label_seq_id 125 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ALA _struct_mon_prot_cis.auth_seq_id 123 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 126 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 124 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 3.01 # _atom_sites.entry_id 5K0I _atom_sites.fract_transf_matrix[1][1] 0.012913 _atom_sites.fract_transf_matrix[1][2] 0.007455 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014910 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008093 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -1 ? ? ? A . n A 1 2 ALA 2 0 ? ? ? A . n A 1 3 LEU 3 1 ? ? ? A . n A 1 4 PRO 4 2 ? ? ? A . n A 1 5 ALA 5 3 ? ? ? A . n A 1 6 HIS 6 4 ? ? ? A . n A 1 7 SER 7 5 5 SER SER A . n A 1 8 LEU 8 6 6 LEU LEU A . n A 1 9 VAL 9 7 7 VAL VAL A . n A 1 10 MET 10 8 8 MET MET A . n A 1 11 SER 11 9 9 SER SER A . n A 1 12 SER 12 10 10 SER SER A . n A 1 13 PRO 13 11 11 PRO PRO A . n A 1 14 ALA 14 12 12 ALA ALA A . n A 1 15 LEU 15 13 13 LEU LEU A . n A 1 16 PRO 16 14 14 PRO PRO A . n A 1 17 ALA 17 15 15 ALA ALA A . n A 1 18 PHE 18 16 16 PHE PHE A . n A 1 19 LEU 19 17 17 LEU LEU A . n A 1 20 LEU 20 18 18 LEU LEU A . n A 1 21 CYS 21 19 19 CYS CYS A . n A 1 22 SER 22 20 20 SER SER A . n A 1 23 THR 23 21 21 THR THR A . n A 1 24 LEU 24 22 22 LEU LEU A . n A 1 25 LEU 25 23 23 LEU LEU A . n A 1 26 VAL 26 24 24 VAL VAL A . n A 1 27 ILE 27 25 25 ILE ILE A . n A 1 28 LYS 28 26 26 LYS LYS A . n A 1 29 MET 29 27 27 MET MET A . n A 1 30 TYR 30 28 28 TYR TYR A . n A 1 31 VAL 31 29 29 VAL VAL A . n A 1 32 VAL 32 30 30 VAL VAL A . n A 1 33 ALA 33 31 31 ALA ALA A . n A 1 34 ILE 34 32 32 ILE ILE A . n A 1 35 ILE 35 33 33 ILE ILE A . n A 1 36 THR 36 34 34 THR THR A . n A 1 37 GLY 37 35 35 GLY GLY A . n A 1 38 GLN 38 36 36 GLN GLN A . n A 1 39 VAL 39 37 37 VAL VAL A . n A 1 40 ARG 40 38 38 ARG ARG A . n A 1 41 LEU 41 39 39 LEU LEU A . n A 1 42 ARG 42 40 40 ARG ARG A . n A 1 43 LYS 43 41 41 LYS LYS A . n A 1 44 LYS 44 42 42 LYS LYS A . n A 1 45 ALA 45 43 43 ALA ALA A . n A 1 46 PHE 46 44 44 PHE PHE A . n A 1 47 ALA 47 45 45 ALA ALA A . n A 1 48 ASN 48 46 46 ASN ASN A . n A 1 49 PRO 49 47 47 PRO PRO A . n A 1 50 GLU 50 48 48 GLU GLU A . n A 1 51 ASP 51 49 49 ASP ASP A . n A 1 52 ALA 52 50 50 ALA ALA A . n A 1 53 LEU 53 51 51 LEU LEU A . n A 1 54 ARG 54 52 52 ARG ARG A . n A 1 55 HIS 55 53 53 HIS HIS A . n A 1 56 GLY 56 54 54 GLY GLY A . n A 1 57 GLY 57 55 55 GLY GLY A . n A 1 58 PRO 58 56 56 PRO PRO A . n A 1 59 GLN 59 57 57 GLN GLN A . n A 1 60 TYR 60 58 58 TYR TYR A . n A 1 61 CSO 61 59 59 CSO CSO A . n A 1 62 ARG 62 60 60 ARG ARG A . n A 1 63 SER 63 61 61 SER SER A . n A 1 64 ASP 64 62 62 ASP ASP A . n A 1 65 PRO 65 63 63 PRO PRO A . n A 1 66 ASP 66 64 64 ASP ASP A . n A 1 67 VAL 67 65 65 VAL VAL A . n A 1 68 GLU 68 66 66 GLU GLU A . n A 1 69 ARG 69 67 67 ARG ARG A . n A 1 70 CYS 70 68 68 CYS CYS A . n A 1 71 LEU 71 69 69 LEU LEU A . n A 1 72 ARG 72 70 70 ARG ARG A . n A 1 73 ALA 73 71 71 ALA ALA A . n A 1 74 HIS 74 72 72 HIS HIS A . n A 1 75 ARG 75 73 73 ARG ARG A . n A 1 76 ASN 76 74 74 ASN ASN A . n A 1 77 ASP 77 75 75 ASP ASP A . n A 1 78 MET 78 76 76 MET MET A . n A 1 79 GLU 79 77 77 GLU GLU A . n A 1 80 THR 80 78 78 THR THR A . n A 1 81 ILE 81 79 79 ILE ILE A . n A 1 82 TYR 82 80 80 TYR TYR A . n A 1 83 PRO 83 81 81 PRO PRO A . n A 1 84 PHE 84 82 82 PHE PHE A . n A 1 85 LEU 85 83 83 LEU LEU A . n A 1 86 PHE 86 84 84 PHE PHE A . n A 1 87 LEU 87 85 85 LEU LEU A . n A 1 88 GLY 88 86 86 GLY GLY A . n A 1 89 PHE 89 87 87 PHE PHE A . n A 1 90 VAL 90 88 88 VAL VAL A . n A 1 91 TYR 91 89 89 TYR TYR A . n A 1 92 SER 92 90 90 SER SER A . n A 1 93 PHE 93 91 91 PHE PHE A . n A 1 94 LEU 94 92 92 LEU LEU A . n A 1 95 GLY 95 93 93 GLY GLY A . n A 1 96 PRO 96 94 94 PRO PRO A . n A 1 97 ASN 97 95 95 ASN ASN A . n A 1 98 PRO 98 96 96 PRO PRO A . n A 1 99 PHE 99 97 97 PHE PHE A . n A 1 100 VAL 100 98 98 VAL VAL A . n A 1 101 ALA 101 99 99 ALA ALA A . n A 1 102 TRP 102 100 100 TRP TRP A . n A 1 103 MET 103 101 101 MET MET A . n A 1 104 HIS 104 102 102 HIS HIS A . n A 1 105 PHE 105 103 103 PHE PHE A . n A 1 106 LEU 106 104 104 LEU LEU A . n A 1 107 VAL 107 105 105 VAL VAL A . n A 1 108 PHE 108 106 106 PHE PHE A . n A 1 109 LEU 109 107 107 LEU LEU A . n A 1 110 VAL 110 108 108 VAL VAL A . n A 1 111 GLY 111 109 109 GLY GLY A . n A 1 112 ARG 112 110 110 ARG ARG A . n A 1 113 VAL 113 111 111 VAL VAL A . n A 1 114 ALA 114 112 112 ALA ALA A . n A 1 115 HIS 115 113 113 HIS HIS A . n A 1 116 THR 116 114 114 THR THR A . n A 1 117 VAL 117 115 115 VAL VAL A . n A 1 118 ALA 118 116 116 ALA ALA A . n A 1 119 TYR 119 117 117 TYR TYR A . n A 1 120 LEU 120 118 118 LEU LEU A . n A 1 121 GLY 121 119 119 GLY GLY A . n A 1 122 LYS 122 120 120 LYS LYS A . n A 1 123 LEU 123 121 121 LEU LEU A . n A 1 124 ARG 124 122 122 ARG ARG A . n A 1 125 ALA 125 123 123 ALA ALA A . n A 1 126 PRO 126 124 124 PRO PRO A . n A 1 127 ILE 127 125 125 ILE ILE A . n A 1 128 ARG 128 126 126 ARG ARG A . n A 1 129 SER 129 127 127 SER SER A . n A 1 130 VAL 130 128 128 VAL VAL A . n A 1 131 THR 131 129 129 THR THR A . n A 1 132 TYR 132 130 130 TYR TYR A . n A 1 133 THR 133 131 131 THR THR A . n A 1 134 LEU 134 132 132 LEU LEU A . n A 1 135 ALA 135 133 133 ALA ALA A . n A 1 136 GLN 136 134 134 GLN GLN A . n A 1 137 LEU 137 135 135 LEU LEU A . n A 1 138 PRO 138 136 136 PRO PRO A . n A 1 139 CYS 139 137 137 CYS CYS A . n A 1 140 ALA 140 138 138 ALA ALA A . n A 1 141 SER 141 139 139 SER SER A . n A 1 142 MET 142 140 140 MET MET A . n A 1 143 ALA 143 141 141 ALA ALA A . n A 1 144 LEU 144 142 142 LEU LEU A . n A 1 145 GLN 145 143 143 GLN GLN A . n A 1 146 ILE 146 144 144 ILE ILE A . n A 1 147 LEU 147 145 145 LEU LEU A . n A 1 148 TRP 148 146 146 TRP TRP A . n A 1 149 GLU 149 147 147 GLU GLU A . n A 1 150 ALA 150 148 148 ALA ALA A . n A 1 151 ALA 151 149 149 ALA ALA A . n A 1 152 ARG 152 150 150 ARG ARG A . n A 1 153 HIS 153 151 151 HIS HIS A . n A 1 154 LEU 154 152 152 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6PW 1 201 1 6PW SX1 A . C 3 GSH 1 202 1 GSH GTT A . D 4 BOG 1 203 2 BOG BOG A . E 4 BOG 1 204 3 BOG BOG A . F 5 PG4 1 205 4 PG4 PG4 A . G 5 PG4 1 206 5 PG4 PG4 A . H 6 HOH 1 301 4 HOH HOH A . H 6 HOH 2 302 5 HOH HOH A . H 6 HOH 3 303 78 HOH HOH A . H 6 HOH 4 304 69 HOH HOH A . H 6 HOH 5 305 31 HOH HOH A . H 6 HOH 6 306 30 HOH HOH A . H 6 HOH 7 307 12 HOH HOH A . H 6 HOH 8 308 8 HOH HOH A . H 6 HOH 9 309 55 HOH HOH A . H 6 HOH 10 310 29 HOH HOH A . H 6 HOH 11 311 6 HOH HOH A . H 6 HOH 12 312 49 HOH HOH A . H 6 HOH 13 313 7 HOH HOH A . H 6 HOH 14 314 10 HOH HOH A . H 6 HOH 15 315 47 HOH HOH A . H 6 HOH 16 316 77 HOH HOH A . H 6 HOH 17 317 67 HOH HOH A . H 6 HOH 18 318 92 HOH HOH A . H 6 HOH 19 319 126 HOH HOH A . H 6 HOH 20 320 90 HOH HOH A . H 6 HOH 21 321 23 HOH HOH A . H 6 HOH 22 322 15 HOH HOH A . H 6 HOH 23 323 62 HOH HOH A . H 6 HOH 24 324 106 HOH HOH A . H 6 HOH 25 325 34 HOH HOH A . H 6 HOH 26 326 35 HOH HOH A . H 6 HOH 27 327 42 HOH HOH A . H 6 HOH 28 328 25 HOH HOH A . H 6 HOH 29 329 9 HOH HOH A . H 6 HOH 30 330 74 HOH HOH A . H 6 HOH 31 331 11 HOH HOH A . H 6 HOH 32 332 79 HOH HOH A . H 6 HOH 33 333 80 HOH HOH A . H 6 HOH 34 334 26 HOH HOH A . H 6 HOH 35 335 53 HOH HOH A . H 6 HOH 36 336 16 HOH HOH A . H 6 HOH 37 337 28 HOH HOH A . H 6 HOH 38 338 57 HOH HOH A . H 6 HOH 39 339 71 HOH HOH A . H 6 HOH 40 340 43 HOH HOH A . H 6 HOH 41 341 27 HOH HOH A . H 6 HOH 42 342 85 HOH HOH A . H 6 HOH 43 343 58 HOH HOH A . H 6 HOH 44 344 56 HOH HOH A . H 6 HOH 45 345 60 HOH HOH A . H 6 HOH 46 346 64 HOH HOH A . H 6 HOH 47 347 45 HOH HOH A . H 6 HOH 48 348 18 HOH HOH A . H 6 HOH 49 349 13 HOH HOH A . H 6 HOH 50 350 19 HOH HOH A . H 6 HOH 51 351 44 HOH HOH A . H 6 HOH 52 352 54 HOH HOH A . H 6 HOH 53 353 93 HOH HOH A . H 6 HOH 54 354 37 HOH HOH A . H 6 HOH 55 355 36 HOH HOH A . H 6 HOH 56 356 32 HOH HOH A . H 6 HOH 57 357 33 HOH HOH A . H 6 HOH 58 358 109 HOH HOH A . H 6 HOH 59 359 105 HOH HOH A . H 6 HOH 60 360 83 HOH HOH A . H 6 HOH 61 361 82 HOH HOH A . H 6 HOH 62 362 98 HOH HOH A . H 6 HOH 63 363 96 HOH HOH A . H 6 HOH 64 364 84 HOH HOH A . H 6 HOH 65 365 41 HOH HOH A . H 6 HOH 66 366 40 HOH HOH A . H 6 HOH 67 367 124 HOH HOH A . H 6 HOH 68 368 20 HOH HOH A . H 6 HOH 69 369 46 HOH HOH A . H 6 HOH 70 370 38 HOH HOH A . H 6 HOH 71 371 17 HOH HOH A . H 6 HOH 72 372 68 HOH HOH A . H 6 HOH 73 373 1 HOH HOH A . H 6 HOH 74 374 14 HOH HOH A . H 6 HOH 75 375 21 HOH HOH A . H 6 HOH 76 376 52 HOH HOH A . H 6 HOH 77 377 24 HOH HOH A . H 6 HOH 78 378 22 HOH HOH A . H 6 HOH 79 379 89 HOH HOH A . H 6 HOH 80 380 59 HOH HOH A . H 6 HOH 81 381 128 HOH HOH A . H 6 HOH 82 382 70 HOH HOH A . H 6 HOH 83 383 72 HOH HOH A . H 6 HOH 84 384 95 HOH HOH A . H 6 HOH 85 385 81 HOH HOH A . H 6 HOH 86 386 76 HOH HOH A . H 6 HOH 87 387 114 HOH HOH A . H 6 HOH 88 388 39 HOH HOH A . H 6 HOH 89 389 94 HOH HOH A . H 6 HOH 90 390 103 HOH HOH A . H 6 HOH 91 391 101 HOH HOH A . H 6 HOH 92 392 122 HOH HOH A . H 6 HOH 93 393 63 HOH HOH A . H 6 HOH 94 394 99 HOH HOH A . H 6 HOH 95 395 133 HOH HOH A . H 6 HOH 96 396 130 HOH HOH A . H 6 HOH 97 397 131 HOH HOH A . H 6 HOH 98 398 73 HOH HOH A . H 6 HOH 99 399 75 HOH HOH A . H 6 HOH 100 400 66 HOH HOH A . H 6 HOH 101 401 125 HOH HOH A . H 6 HOH 102 402 111 HOH HOH A . H 6 HOH 103 403 121 HOH HOH A . H 6 HOH 104 404 48 HOH HOH A . H 6 HOH 105 405 129 HOH HOH A . H 6 HOH 106 406 107 HOH HOH A . H 6 HOH 107 407 102 HOH HOH A . H 6 HOH 108 408 51 HOH HOH A . H 6 HOH 109 409 110 HOH HOH A . H 6 HOH 110 410 2 HOH HOH A . H 6 HOH 111 411 65 HOH HOH A . H 6 HOH 112 412 88 HOH HOH A . H 6 HOH 113 413 61 HOH HOH A . H 6 HOH 114 414 115 HOH HOH A . H 6 HOH 115 415 104 HOH HOH A . H 6 HOH 116 416 123 HOH HOH A . H 6 HOH 117 417 132 HOH HOH A . H 6 HOH 118 418 97 HOH HOH A . H 6 HOH 119 419 50 HOH HOH A . H 6 HOH 120 420 127 HOH HOH A . H 6 HOH 121 421 86 HOH HOH A . H 6 HOH 122 422 112 HOH HOH A . H 6 HOH 123 423 3 HOH HOH A . H 6 HOH 124 424 113 HOH HOH A . H 6 HOH 125 425 116 HOH HOH A . H 6 HOH 126 426 108 HOH HOH A . H 6 HOH 127 427 120 HOH HOH A . H 6 HOH 128 428 100 HOH HOH A . H 6 HOH 129 429 87 HOH HOH A . H 6 HOH 130 430 118 HOH HOH A . H 6 HOH 131 431 91 HOH HOH A . H 6 HOH 132 432 117 HOH HOH A . H 6 HOH 133 433 119 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id CSO _pdbx_struct_mod_residue.label_seq_id 61 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id CSO _pdbx_struct_mod_residue.auth_seq_id 59 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id CYS _pdbx_struct_mod_residue.details 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 14900 ? 1 MORE -51 ? 1 'SSA (A^2)' 18800 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 375 ? H HOH . 2 1 A HOH 421 ? H HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-09-14 2 'Structure model' 1 1 2016-09-21 3 'Structure model' 1 2 2017-09-06 4 'Structure model' 1 3 2019-12-04 5 'Structure model' 1 4 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Author supporting evidence' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 3 'Structure model' pdbx_audit_support 3 3 'Structure model' pdbx_struct_oper_list 4 4 'Structure model' pdbx_audit_support 5 5 'Structure model' chem_comp 6 5 'Structure model' entity 7 5 'Structure model' pdbx_chem_comp_identifier 8 5 'Structure model' pdbx_entity_nonpoly 9 5 'Structure model' struct_site 10 5 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.journal_id_CSD' 2 3 'Structure model' '_pdbx_audit_support.funding_organization' 3 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 4 'Structure model' '_pdbx_audit_support.funding_organization' 5 5 'Structure model' '_chem_comp.mon_nstd_flag' 6 5 'Structure model' '_chem_comp.name' 7 5 'Structure model' '_chem_comp.type' 8 5 'Structure model' '_entity.pdbx_description' 9 5 'Structure model' '_pdbx_entity_nonpoly.name' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.5.0109 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id PRO _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 124 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -99.93 _pdbx_validate_torsion.psi 35.22 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 429 ? 5.87 . 2 1 O ? A HOH 430 ? 5.89 . 3 1 O ? A HOH 431 ? 5.90 . 4 1 O ? A HOH 432 ? 6.24 . 5 1 O ? A HOH 433 ? 6.28 . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 40 ? CZ ? A ARG 42 CZ 2 1 Y 1 A ARG 40 ? NH1 ? A ARG 42 NH1 3 1 Y 1 A ARG 40 ? NH2 ? A ARG 42 NH2 4 1 N 1 A PG4 206 ? C5 ? G PG4 1 C5 5 1 N 1 A PG4 206 ? C6 ? G PG4 1 C6 6 1 N 1 A PG4 206 ? O4 ? G PG4 1 O4 7 1 N 1 A PG4 206 ? C7 ? G PG4 1 C7 8 1 N 1 A PG4 206 ? C8 ? G PG4 1 C8 9 1 N 1 A PG4 206 ? O5 ? G PG4 1 O5 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -1 ? A MET 1 2 1 Y 1 A ALA 0 ? A ALA 2 3 1 Y 1 A LEU 1 ? A LEU 3 4 1 Y 1 A PRO 2 ? A PRO 4 5 1 Y 1 A ALA 3 ? A ALA 5 6 1 Y 1 A HIS 4 ? A HIS 6 # _pdbx_audit_support.funding_organization 'Department of Energy (DOE, United States)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number DE-AC02-06CH11357 _pdbx_audit_support.ordinal 1 # _pdbx_chem_comp_identifier.comp_id BOG _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1.0 _pdbx_chem_comp_identifier.identifier b-octylglucoside # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '1,5-anhydro-2,3,4-trideoxy-3-{[(4S)-3,3-dimethyl-1-(8-methylquinolin-2-yl)piperidine-4-carbonyl]amino}-D-erythro-hexitol' 6PW 3 GLUTATHIONE GSH 4 'octyl beta-D-glucopyranoside' BOG 5 'TETRAETHYLENE GLYCOL' PG4 6 water HOH #