data_5KRG # _entry.id 5KRG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5KRG pdb_00005krg 10.2210/pdb5krg/pdb WWPDB D_1000222613 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5KRG _pdbx_database_status.recvd_initial_deposition_date 2016-07-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhang, W.' 1 'Tam, C.P.' 2 'Szostak, J.W.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'ACS Cent Sci' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2374-7943 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 2 _citation.language ? _citation.page_first 916 _citation.page_last 926 _citation.title 'Unusual Base-Pairing Interactions in Monomer-Template Complexes.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acscentsci.6b00278 _citation.pdbx_database_id_PubMed 28058281 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, W.' 1 ? primary 'Tam, C.P.' 2 ? primary 'Wang, J.' 3 ? primary 'Szostak, J.W.' 4 ? # _cell.entry_id 5KRG _cell.length_a 44.046 _cell.length_b 44.046 _cell.length_c 84.516 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KRG _symmetry.space_group_name_H-M 'P 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 143 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3') ; 4858.010 4 ? ? ? ? 2 non-polymer syn ;[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-(3-methyl-1~{H}-pyrazol-4-yl)phosphinic acid ; 427.309 4 ? ? ? ? 3 water nat water 18.015 92 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(LCC)(LCC)(LCC)(LCG)ACUUAAGUCGG' _entity_poly.pdbx_seq_one_letter_code_can NNNGACUUAAGUCGG _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LCC n 1 2 LCC n 1 3 LCC n 1 4 LCG n 1 5 A n 1 6 C n 1 7 U n 1 8 U n 1 9 A n 1 10 A n 1 11 G n 1 12 U n 1 13 C n 1 14 G n 1 15 G n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 15 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5KRG _struct_ref.pdbx_db_accession 5KRG _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5KRG A 1 ? 15 ? 5KRG 1 ? 15 ? 1 15 2 1 5KRG B 1 ? 15 ? 5KRG 1 ? 15 ? 1 15 3 1 5KRG C 1 ? 15 ? 5KRG 1 ? 15 ? 1 15 4 1 5KRG D 1 ? 15 ? 5KRG 1 ? 15 ? 1 15 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 LCC 'RNA linking' . '[(1R,3R,4R,7S)-7-HYDROXY-3-(5-METHYLCYTOSIN-1-YL)-2,5-DIOXABICYCLO[2.2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE' ? 'C11 H16 N3 O8 P' 349.234 LCG 'RNA linking' n '[(1R,3R,4R,7S)-7-HYDROXY-3-(GUANIN-9-YL)-2,5-DIOXABICYCLO[2.2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE' ? 'C11 H14 N5 O8 P' 375.231 PZG 'DNA linking' n ;[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-(3-methyl-1~{H}-pyrazol-4-yl)phosphinic acid ; ? 'C14 H18 N7 O7 P' 427.309 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5KRG _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.32 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 49.50 _exptl_crystal.description 'diamond shape' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.01 M Magnesium chloride hexahydrate, 0.05 M HEPES sodium pH 7.0, 4.0 M Lithium chloride' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 99 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-01-26 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5KRG _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.60 _reflns.d_resolution_low 50.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 21914 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 95.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.5 _reflns.pdbx_Rmerge_I_obs 0.11 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.966 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.66 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.18 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 71.3 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.27 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 1.6 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.941 _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5KRG _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 21914 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.258 _refine.ls_d_res_high 1.60 _refine.ls_percent_reflns_obs 95.47 _refine.ls_R_factor_obs 0.20711 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20565 _refine.ls_R_factor_R_free 0.23384 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.4 _refine.ls_number_reflns_R_free 1242 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.958 _refine.B_iso_mean 27.539 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] -0.01 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 4NFO _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.104 _refine.pdbx_overall_ESU_R_Free 0.101 _refine.overall_SU_ML 0.071 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.086 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1288 _refine_hist.pdbx_number_atoms_ligand 116 _refine_hist.number_atoms_solvent 92 _refine_hist.number_atoms_total 1496 _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 42.258 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.024 0.016 ? 1560 'X-RAY DIFFRACTION' ? r_bond_other_d 0.074 0.024 ? 700 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.656 1.858 ? 2416 'X-RAY DIFFRACTION' ? r_angle_other_deg 3.922 3.229 ? 1680 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.122 0.200 ? 272 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.021 0.020 ? 804 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.021 ? 304 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.509 2.859 ? 1560 'X-RAY DIFFRACTION' ? r_scbond_other 2.508 2.863 ? 1561 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 3.573 4.290 ? 2417 'X-RAY DIFFRACTION' ? r_long_range_B_refined 3.933 28.171 ? 2284 'X-RAY DIFFRACTION' ? r_long_range_B_other 3.918 28.178 ? 2271 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.599 _refine_ls_shell.d_res_low 1.641 _refine_ls_shell.number_reflns_R_work 1129 _refine_ls_shell.R_factor_R_work 0.307 _refine_ls_shell.percent_reflns_obs 66.31 _refine_ls_shell.R_factor_R_free 0.315 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 62 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 5KRG _struct.title 'RNA 15mer duplex binding with PZG monomer' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5KRG _struct_keywords.text RNA _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LCC 1 "O3'" ? ? ? 1_555 A LCC 2 P ? ? A LCC 1 A LCC 2 1_555 ? ? ? ? ? ? ? 1.684 ? ? covale2 covale both ? A LCC 2 "O3'" ? ? ? 1_555 A LCC 3 P ? ? A LCC 2 A LCC 3 1_555 ? ? ? ? ? ? ? 1.693 ? ? covale3 covale both ? A LCC 3 "O3'" ? ? ? 1_555 A LCG 4 P ? ? A LCC 3 A LCG 4 1_555 ? ? ? ? ? ? ? 1.656 ? ? covale4 covale both ? A LCG 4 "O3'" ? ? ? 1_555 A A 5 P ? ? A LCG 4 A A 5 1_555 ? ? ? ? ? ? ? 1.583 ? ? covale5 covale both ? B LCC 1 "O3'" ? ? ? 1_555 B LCC 2 P ? ? B LCC 1 B LCC 2 1_555 ? ? ? ? ? ? ? 1.681 ? ? covale6 covale both ? B LCC 2 "O3'" ? ? ? 1_555 B LCC 3 P ? ? B LCC 2 B LCC 3 1_555 ? ? ? ? ? ? ? 1.681 ? ? covale7 covale both ? B LCC 3 "O3'" ? ? ? 1_555 B LCG 4 P ? ? B LCC 3 B LCG 4 1_555 ? ? ? ? ? ? ? 1.701 ? ? covale8 covale both ? B LCG 4 "O3'" ? ? ? 1_555 B A 5 P ? ? B LCG 4 B A 5 1_555 ? ? ? ? ? ? ? 1.524 ? ? covale9 covale both ? C LCC 1 "O3'" ? ? ? 1_555 C LCC 2 P ? ? C LCC 1 C LCC 2 1_555 ? ? ? ? ? ? ? 1.643 ? ? covale10 covale both ? C LCC 2 "O3'" ? ? ? 1_555 C LCC 3 P ? ? C LCC 2 C LCC 3 1_555 ? ? ? ? ? ? ? 1.709 ? ? covale11 covale both ? C LCC 3 "O3'" ? ? ? 1_555 C LCG 4 P ? ? C LCC 3 C LCG 4 1_555 ? ? ? ? ? ? ? 1.666 ? ? covale12 covale both ? C LCG 4 "O3'" ? ? ? 1_555 C A 5 P ? ? C LCG 4 C A 5 1_555 ? ? ? ? ? ? ? 1.592 ? ? covale13 covale both ? D LCC 1 "O3'" ? ? ? 1_555 D LCC 2 P ? ? D LCC 1 D LCC 2 1_555 ? ? ? ? ? ? ? 1.697 ? ? covale14 covale both ? D LCC 2 "O3'" ? ? ? 1_555 D LCC 3 P ? ? D LCC 2 D LCC 3 1_555 ? ? ? ? ? ? ? 1.660 ? ? covale15 covale both ? D LCC 3 "O3'" ? ? ? 1_555 D LCG 4 P ? ? D LCC 3 D LCG 4 1_555 ? ? ? ? ? ? ? 1.669 ? ? covale16 covale both ? D LCG 4 "O3'" ? ? ? 1_555 D A 5 P ? ? D LCG 4 D A 5 1_555 ? ? ? ? ? ? ? 1.547 ? ? hydrog1 hydrog ? ? A LCG 4 N1 ? ? ? 1_555 B C 13 N3 ? ? A LCG 4 B C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A LCG 4 N2 ? ? ? 1_555 B C 13 O2 ? ? A LCG 4 B C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A LCG 4 O6 ? ? ? 1_555 B C 13 N4 ? ? A LCG 4 B C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A A 5 N1 ? ? ? 1_555 B U 12 N3 ? ? A A 5 B U 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A A 5 N6 ? ? ? 1_555 B U 12 O4 ? ? A A 5 B U 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 6 N3 ? ? ? 1_555 B G 11 N1 ? ? A C 6 B G 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 6 N4 ? ? ? 1_555 B G 11 O6 ? ? A C 6 B G 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 6 O2 ? ? ? 1_555 B G 11 N2 ? ? A C 6 B G 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A U 7 N3 ? ? ? 1_555 B A 10 N1 ? ? A U 7 B A 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 7 O4 ? ? ? 1_555 B A 10 N6 ? ? A U 7 B A 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A U 8 N3 ? ? ? 1_555 B A 9 N1 ? ? A U 8 B A 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A U 8 O4 ? ? ? 1_555 B A 9 N6 ? ? A U 8 B A 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A A 9 N1 ? ? ? 1_555 B U 8 N3 ? ? A A 9 B U 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A A 9 N6 ? ? ? 1_555 B U 8 O4 ? ? A A 9 B U 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A A 10 N1 ? ? ? 1_555 B U 7 N3 ? ? A A 10 B U 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A A 10 N6 ? ? ? 1_555 B U 7 O4 ? ? A A 10 B U 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 11 N1 ? ? ? 1_555 B C 6 N3 ? ? A G 11 B C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 11 N2 ? ? ? 1_555 B C 6 O2 ? ? A G 11 B C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 11 O6 ? ? ? 1_555 B C 6 N4 ? ? A G 11 B C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A U 12 N3 ? ? ? 1_555 B A 5 N1 ? ? A U 12 B A 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A U 12 O4 ? ? ? 1_555 B A 5 N6 ? ? A U 12 B A 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 13 N3 ? ? ? 1_555 B LCG 4 N1 ? ? A C 13 B LCG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A C 13 N4 ? ? ? 1_555 B LCG 4 O6 ? ? A C 13 B LCG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A C 13 O2 ? ? ? 1_555 B LCG 4 N2 ? ? A C 13 B LCG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C LCG 4 N1 ? ? ? 1_555 D C 13 N3 ? ? C LCG 4 D C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C LCG 4 N2 ? ? ? 1_555 D C 13 O2 ? ? C LCG 4 D C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C LCG 4 O6 ? ? ? 1_555 D C 13 N4 ? ? C LCG 4 D C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C A 5 N1 ? ? ? 1_555 D U 12 N3 ? ? C A 5 D U 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C A 5 N6 ? ? ? 1_555 D U 12 O4 ? ? C A 5 D U 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C C 6 N3 ? ? ? 1_555 D G 11 N1 ? ? C C 6 D G 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C C 6 N4 ? ? ? 1_555 D G 11 O6 ? ? C C 6 D G 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C C 6 O2 ? ? ? 1_555 D G 11 N2 ? ? C C 6 D G 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C U 7 N3 ? ? ? 1_555 D A 10 N1 ? ? C U 7 D A 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C U 7 O4 ? ? ? 1_555 D A 10 N6 ? ? C U 7 D A 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C U 8 N3 ? ? ? 1_555 D A 9 N1 ? ? C U 8 D A 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C U 8 O4 ? ? ? 1_555 D A 9 N6 ? ? C U 8 D A 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C A 9 N1 ? ? ? 1_555 D U 8 N3 ? ? C A 9 D U 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C A 9 N6 ? ? ? 1_555 D U 8 O4 ? ? C A 9 D U 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C A 10 N1 ? ? ? 1_555 D U 7 N3 ? ? C A 10 D U 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C A 10 N6 ? ? ? 1_555 D U 7 O4 ? ? C A 10 D U 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C G 11 N1 ? ? ? 1_555 D C 6 N3 ? ? C G 11 D C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C G 11 N2 ? ? ? 1_555 D C 6 O2 ? ? C G 11 D C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C G 11 O6 ? ? ? 1_555 D C 6 N4 ? ? C G 11 D C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C U 12 N3 ? ? ? 1_555 D A 5 N1 ? ? C U 12 D A 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C U 12 O4 ? ? ? 1_555 D A 5 N6 ? ? C U 12 D A 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C C 13 N3 ? ? ? 1_555 D LCG 4 N1 ? ? C C 13 D LCG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C C 13 N4 ? ? ? 1_555 D LCG 4 O6 ? ? C C 13 D LCG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C C 13 O2 ? ? ? 1_555 D LCG 4 N2 ? ? C C 13 D LCG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PZG 101 ? 5 'binding site for residue PZG A 101' AC2 Software A PZG 102 ? 6 'binding site for residue PZG A 102' AC3 Software C PZG 101 ? 6 'binding site for residue PZG C 101' AC4 Software D PZG 101 ? 8 'binding site for residue PZG D 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 LCC A 1 ? LCC A 1 . ? 1_555 ? 2 AC1 5 LCC C 1 ? LCC C 1 . ? 1_555 ? 3 AC1 5 LCC C 2 ? LCC C 2 . ? 1_555 ? 4 AC1 5 G D 15 ? G D 15 . ? 1_555 ? 5 AC1 5 G D 15 ? G D 15 . ? 3_675 ? 6 AC2 6 G A 15 ? G A 15 . ? 1_555 ? 7 AC2 6 G A 15 ? G A 15 . ? 3_665 ? 8 AC2 6 HOH I . ? HOH A 203 . ? 1_555 ? 9 AC2 6 LCC B 1 ? LCC B 1 . ? 1_555 ? 10 AC2 6 LCC B 2 ? LCC B 2 . ? 1_555 ? 11 AC2 6 LCC D 1 ? LCC D 1 . ? 2_756 ? 12 AC3 6 LCC A 1 ? LCC A 1 . ? 1_555 ? 13 AC3 6 LCC A 2 ? LCC A 2 . ? 1_555 ? 14 AC3 6 G B 15 ? G B 15 . ? 1_555 ? 15 AC3 6 G B 15 ? G B 15 . ? 2_655 ? 16 AC3 6 HOH J . ? HOH B 102 . ? 1_555 ? 17 AC3 6 LCC C 1 ? LCC C 1 . ? 1_555 ? 18 AC4 8 U A 12 ? U A 12 . ? 1_554 ? 19 AC4 8 C A 13 ? C A 13 . ? 1_554 ? 20 AC4 8 LCC B 1 ? LCC B 1 . ? 3_774 ? 21 AC4 8 G C 15 ? G C 15 . ? 1_555 ? 22 AC4 8 G C 15 ? G C 15 . ? 2_765 ? 23 AC4 8 LCC D 1 ? LCC D 1 . ? 1_555 ? 24 AC4 8 LCC D 2 ? LCC D 2 . ? 1_555 ? 25 AC4 8 HOH L . ? HOH D 203 . ? 1_555 ? # _atom_sites.entry_id 5KRG _atom_sites.fract_transf_matrix[1][1] 0.022704 _atom_sites.fract_transf_matrix[1][2] 0.013108 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026216 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011832 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LCC 1 1 1 LCC LCC A . n A 1 2 LCC 2 2 2 LCC LCC A . n A 1 3 LCC 3 3 3 LCC LCC A . n A 1 4 LCG 4 4 4 LCG LCG A . n A 1 5 A 5 5 5 A A A . n A 1 6 C 6 6 6 C C A . n A 1 7 U 7 7 7 U U A . n A 1 8 U 8 8 8 U U A . n A 1 9 A 9 9 9 A A A . n A 1 10 A 10 10 10 A A A . n A 1 11 G 11 11 11 G G A . n A 1 12 U 12 12 12 U U A . n A 1 13 C 13 13 13 C C A . n A 1 14 G 14 14 14 G G A . n A 1 15 G 15 15 15 G G A . n B 1 1 LCC 1 1 1 LCC LCC B . n B 1 2 LCC 2 2 2 LCC LCC B . n B 1 3 LCC 3 3 3 LCC LCC B . n B 1 4 LCG 4 4 4 LCG LCG B . n B 1 5 A 5 5 5 A A B . n B 1 6 C 6 6 6 C C B . n B 1 7 U 7 7 7 U U B . n B 1 8 U 8 8 8 U U B . n B 1 9 A 9 9 9 A A B . n B 1 10 A 10 10 10 A A B . n B 1 11 G 11 11 11 G G B . n B 1 12 U 12 12 12 U U B . n B 1 13 C 13 13 13 C C B . n B 1 14 G 14 14 14 G G B . n B 1 15 G 15 15 15 G G B . n C 1 1 LCC 1 1 1 LCC LCC C . n C 1 2 LCC 2 2 2 LCC LCC C . n C 1 3 LCC 3 3 3 LCC LCC C . n C 1 4 LCG 4 4 4 LCG LCG C . n C 1 5 A 5 5 5 A A C . n C 1 6 C 6 6 6 C C C . n C 1 7 U 7 7 7 U U C . n C 1 8 U 8 8 8 U U C . n C 1 9 A 9 9 9 A A C . n C 1 10 A 10 10 10 A A C . n C 1 11 G 11 11 11 G G C . n C 1 12 U 12 12 12 U U C . n C 1 13 C 13 13 13 C C C . n C 1 14 G 14 14 14 G G C . n C 1 15 G 15 15 15 G G C . n D 1 1 LCC 1 1 1 LCC LCC D . n D 1 2 LCC 2 2 2 LCC LCC D . n D 1 3 LCC 3 3 3 LCC LCC D . n D 1 4 LCG 4 4 4 LCG LCG D . n D 1 5 A 5 5 5 A A D . n D 1 6 C 6 6 6 C C D . n D 1 7 U 7 7 7 U U D . n D 1 8 U 8 8 8 U U D . n D 1 9 A 9 9 9 A A D . n D 1 10 A 10 10 10 A A D . n D 1 11 G 11 11 11 G G D . n D 1 12 U 12 12 12 U U D . n D 1 13 C 13 13 13 C C D . n D 1 14 G 14 14 14 G G D . n D 1 15 G 15 15 15 G G D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PZG 1 101 4 PZG PZG A . F 2 PZG 1 102 5 PZG PZG A . G 2 PZG 1 101 6 PZG PZG C . H 2 PZG 1 101 3 PZG PZG D . I 3 HOH 1 201 102 HOH HOH A . I 3 HOH 2 202 96 HOH HOH A . I 3 HOH 3 203 134 HOH HOH A . I 3 HOH 4 204 135 HOH HOH A . I 3 HOH 5 205 133 HOH HOH A . I 3 HOH 6 206 120 HOH HOH A . I 3 HOH 7 207 104 HOH HOH A . I 3 HOH 8 208 126 HOH HOH A . I 3 HOH 9 209 103 HOH HOH A . I 3 HOH 10 210 101 HOH HOH A . I 3 HOH 11 211 94 HOH HOH A . I 3 HOH 12 212 124 HOH HOH A . I 3 HOH 13 213 97 HOH HOH A . I 3 HOH 14 214 121 HOH HOH A . I 3 HOH 15 215 125 HOH HOH A . I 3 HOH 16 216 139 HOH HOH A . I 3 HOH 17 217 123 HOH HOH A . I 3 HOH 18 218 99 HOH HOH A . I 3 HOH 19 219 105 HOH HOH A . I 3 HOH 20 220 106 HOH HOH A . I 3 HOH 21 221 107 HOH HOH A . I 3 HOH 22 222 98 HOH HOH A . I 3 HOH 23 223 127 HOH HOH A . I 3 HOH 24 224 95 HOH HOH A . J 3 HOH 1 101 130 HOH HOH B . J 3 HOH 2 102 140 HOH HOH B . J 3 HOH 3 103 116 HOH HOH B . J 3 HOH 4 104 137 HOH HOH B . J 3 HOH 5 105 136 HOH HOH B . J 3 HOH 6 106 138 HOH HOH B . J 3 HOH 7 107 131 HOH HOH B . J 3 HOH 8 108 122 HOH HOH B . J 3 HOH 9 109 113 HOH HOH B . J 3 HOH 10 110 115 HOH HOH B . J 3 HOH 11 111 114 HOH HOH B . J 3 HOH 12 112 111 HOH HOH B . J 3 HOH 13 113 110 HOH HOH B . J 3 HOH 14 114 128 HOH HOH B . J 3 HOH 15 115 119 HOH HOH B . J 3 HOH 16 116 129 HOH HOH B . J 3 HOH 17 117 112 HOH HOH B . J 3 HOH 18 118 108 HOH HOH B . J 3 HOH 19 119 118 HOH HOH B . J 3 HOH 20 120 100 HOH HOH B . J 3 HOH 21 121 117 HOH HOH B . J 3 HOH 22 122 132 HOH HOH B . J 3 HOH 23 123 109 HOH HOH B . K 3 HOH 1 201 89 HOH HOH C . K 3 HOH 2 202 32 HOH HOH C . K 3 HOH 3 203 91 HOH HOH C . K 3 HOH 4 204 48 HOH HOH C . K 3 HOH 5 205 67 HOH HOH C . K 3 HOH 6 206 38 HOH HOH C . K 3 HOH 7 207 40 HOH HOH C . K 3 HOH 8 208 39 HOH HOH C . K 3 HOH 9 209 88 HOH HOH C . K 3 HOH 10 210 35 HOH HOH C . K 3 HOH 11 211 47 HOH HOH C . K 3 HOH 12 212 34 HOH HOH C . K 3 HOH 13 213 69 HOH HOH C . K 3 HOH 14 214 37 HOH HOH C . K 3 HOH 15 215 86 HOH HOH C . K 3 HOH 16 216 76 HOH HOH C . K 3 HOH 17 217 66 HOH HOH C . K 3 HOH 18 218 87 HOH HOH C . K 3 HOH 19 219 33 HOH HOH C . K 3 HOH 20 220 71 HOH HOH C . K 3 HOH 21 221 65 HOH HOH C . K 3 HOH 22 222 41 HOH HOH C . K 3 HOH 23 223 29 HOH HOH C . K 3 HOH 24 224 27 HOH HOH C . L 3 HOH 1 201 73 HOH HOH D . L 3 HOH 2 202 51 HOH HOH D . L 3 HOH 3 203 72 HOH HOH D . L 3 HOH 4 204 46 HOH HOH D . L 3 HOH 5 205 92 HOH HOH D . L 3 HOH 6 206 90 HOH HOH D . L 3 HOH 7 207 52 HOH HOH D . L 3 HOH 8 208 70 HOH HOH D . L 3 HOH 9 209 68 HOH HOH D . L 3 HOH 10 210 28 HOH HOH D . L 3 HOH 11 211 43 HOH HOH D . L 3 HOH 12 212 44 HOH HOH D . L 3 HOH 13 213 49 HOH HOH D . L 3 HOH 14 214 77 HOH HOH D . L 3 HOH 15 215 93 HOH HOH D . L 3 HOH 16 216 45 HOH HOH D . L 3 HOH 17 217 42 HOH HOH D . L 3 HOH 18 218 36 HOH HOH D . L 3 HOH 19 219 31 HOH HOH D . L 3 HOH 20 220 30 HOH HOH D . L 3 HOH 21 221 50 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,F,I,J 2 1 C,D,G,H,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2820 ? 1 MORE 12 ? 1 'SSA (A^2)' 5980 ? 2 'ABSA (A^2)' 2870 ? 2 MORE 11 ? 2 'SSA (A^2)' 5970 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 207 ? I HOH . 2 1 A HOH 212 ? I HOH . 3 1 A HOH 218 ? I HOH . 4 1 B HOH 107 ? J HOH . 5 1 C HOH 207 ? K HOH . 6 1 C HOH 216 ? K HOH . 7 1 C HOH 219 ? K HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-12-07 2 'Structure model' 1 1 2017-01-18 3 'Structure model' 1 2 2017-09-20 4 'Structure model' 1 3 2019-11-20 5 'Structure model' 1 4 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_audit_support 2 4 'Structure model' pdbx_audit_support 3 4 'Structure model' pdbx_struct_special_symmetry 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' database_2 7 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_audit_support.funding_organization' 2 4 'Structure model' '_pdbx_audit_support.funding_organization' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0135 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? 2000 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? 2000 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.5.6 4 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" A LCC 1 ? ? P A LCC 2 ? ? 1.684 1.607 0.077 0.012 Y 2 1 "O3'" A LCC 2 ? ? P A LCC 3 ? ? 1.693 1.607 0.086 0.012 Y 3 1 "O3'" B LCC 1 ? ? P B LCC 2 ? ? 1.681 1.607 0.074 0.012 Y 4 1 "O3'" B LCC 2 ? ? P B LCC 3 ? ? 1.681 1.607 0.074 0.012 Y 5 1 "O3'" B LCC 3 ? ? P B LCG 4 ? ? 1.701 1.607 0.094 0.012 Y 6 1 "O3'" B LCG 4 ? ? P B A 5 ? ? 1.524 1.607 -0.083 0.012 Y 7 1 "O3'" C LCC 2 ? ? P C LCC 3 ? ? 1.709 1.607 0.102 0.012 Y 8 1 "O3'" C U 8 ? ? P C A 9 ? ? 1.533 1.607 -0.074 0.012 Y 9 1 "O3'" D LCC 1 ? ? P D LCC 2 ? ? 1.697 1.607 0.090 0.012 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O3'" A LCC 1 ? ? P A LCC 2 ? ? "O5'" A LCC 2 ? ? 92.27 104.00 -11.73 1.90 Y 2 1 "O5'" A G 11 ? ? P A G 11 ? ? OP2 A G 11 ? ? 100.25 105.70 -5.45 0.90 N 3 1 "O5'" C G 15 ? ? P C G 15 ? ? OP2 C G 15 ? ? 93.80 105.70 -11.90 0.90 N 4 1 "O3'" D LCG 4 ? ? P D A 5 ? ? OP2 D A 5 ? ? 117.44 110.50 6.94 1.10 Y 5 1 "O5'" D A 9 ? ? P D A 9 ? ? OP2 D A 9 ? ? 98.39 105.70 -7.31 0.90 N 6 1 "O5'" D U 12 ? ? P D U 12 ? ? OP2 D U 12 ? ? 99.93 105.70 -5.77 0.90 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 LCC "O5'" O N N 114 LCC "C5'" C N N 115 LCC "C4'" C N R 116 LCC "O4'" O N N 117 LCC "C1'" C N R 118 LCC N1 N N N 119 LCC C6 C N N 120 LCC C5 C N N 121 LCC C5M C N N 122 LCC C4 C N N 123 LCC N4 N N N 124 LCC N3 N N N 125 LCC C2 C N N 126 LCC O2 O N N 127 LCC "C3'" C N S 128 LCC "C2'" C N R 129 LCC "O2'" O N N 130 LCC "O3'" O N N 131 LCC "C6'" C N N 132 LCC P P N N 133 LCC O1P O N N 134 LCC O2P O N N 135 LCC OXT O N N 136 LCC "H5'1" H N N 137 LCC "H5'2" H N N 138 LCC "H1'" H N N 139 LCC H6 H N N 140 LCC H5M1 H N N 141 LCC H5M2 H N N 142 LCC H5M3 H N N 143 LCC H41 H N N 144 LCC H42 H N N 145 LCC "H3'" H N N 146 LCC "H2'1" H N N 147 LCC H3T H N N 148 LCC "H6'1" H N N 149 LCC "H6'2" H N N 150 LCC H1P H N N 151 LCC HXT H N N 152 LCG P P N N 153 LCG OP1 O N N 154 LCG "O5'" O N N 155 LCG "C5'" C N N 156 LCG "C3'" C N S 157 LCG "C6'" C N N 158 LCG N9 N Y N 159 LCG C8 C Y N 160 LCG C4 C Y N 161 LCG N7 N Y N 162 LCG C5 C Y N 163 LCG C6 C N N 164 LCG "C2'" C N R 165 LCG O6 O N N 166 LCG "C4'" C N R 167 LCG "C1'" C N R 168 LCG C2 C N N 169 LCG N1 N N N 170 LCG "O4'" O N N 171 LCG OP2 O N N 172 LCG N2 N N N 173 LCG N3 N N N 174 LCG "O2'" O N N 175 LCG "O3'" O N N 176 LCG OP3 O N N 177 LCG "H5'" H N N 178 LCG "H5''" H N N 179 LCG "H3'" H N N 180 LCG "H6'1" H N N 181 LCG "H6'2" H N N 182 LCG H8 H N N 183 LCG "H2'" H N N 184 LCG "H1'" H N N 185 LCG H1 H N N 186 LCG HOP2 H N N 187 LCG H21 H N N 188 LCG H22 H N N 189 LCG "HO3'" H N N 190 LCG HOP3 H N N 191 PZG O1 O N N 192 PZG C1 C N N 193 PZG N1 N N N 194 PZG C2 C N N 195 PZG N2 N N N 196 PZG N3 N N N 197 PZG C3 C Y N 198 PZG C4 C Y N 199 PZG N4 N Y N 200 PZG C5 C Y N 201 PZG N5 N Y N 202 PZG C6 C N R 203 PZG O2 O N N 204 PZG C7 C N R 205 PZG O3 O N N 206 PZG C8 C N S 207 PZG O4 O N N 208 PZG C9 C N R 209 PZG C10 C N N 210 PZG O5 O N N 211 PZG P1 P N N 212 PZG O6 O N N 213 PZG O7 O N N 214 PZG C11 C Y N 215 PZG C12 C Y N 216 PZG N6 N Y N 217 PZG N7 N Y N 218 PZG C13 C Y N 219 PZG C14 C N N 220 PZG H1 H N N 221 PZG H2 H N N 222 PZG H3 H N N 223 PZG H4 H N N 224 PZG H5 H N N 225 PZG H6 H N N 226 PZG H7 H N N 227 PZG H8 H N N 228 PZG H9 H N N 229 PZG H10 H N N 230 PZG H11 H N N 231 PZG H12 H N N 232 PZG H13 H N N 233 PZG H14 H N N 234 PZG H15 H N N 235 PZG H16 H N N 236 PZG H17 H N N 237 PZG H18 H N N 238 U OP3 O N N 239 U P P N N 240 U OP1 O N N 241 U OP2 O N N 242 U "O5'" O N N 243 U "C5'" C N N 244 U "C4'" C N R 245 U "O4'" O N N 246 U "C3'" C N S 247 U "O3'" O N N 248 U "C2'" C N R 249 U "O2'" O N N 250 U "C1'" C N R 251 U N1 N N N 252 U C2 C N N 253 U O2 O N N 254 U N3 N N N 255 U C4 C N N 256 U O4 O N N 257 U C5 C N N 258 U C6 C N N 259 U HOP3 H N N 260 U HOP2 H N N 261 U "H5'" H N N 262 U "H5''" H N N 263 U "H4'" H N N 264 U "H3'" H N N 265 U "HO3'" H N N 266 U "H2'" H N N 267 U "HO2'" H N N 268 U "H1'" H N N 269 U H3 H N N 270 U H5 H N N 271 U H6 H N N 272 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 LCC "O5'" "C5'" sing N N 118 LCC "O5'" P sing N N 119 LCC "C5'" "C4'" sing N N 120 LCC "C5'" "H5'1" sing N N 121 LCC "C5'" "H5'2" sing N N 122 LCC "C4'" "O4'" sing N N 123 LCC "C4'" "C3'" sing N N 124 LCC "C4'" "C6'" sing N N 125 LCC "O4'" "C1'" sing N N 126 LCC "C1'" N1 sing N N 127 LCC "C1'" "C2'" sing N N 128 LCC "C1'" "H1'" sing N N 129 LCC N1 C6 sing N N 130 LCC N1 C2 sing N N 131 LCC C6 C5 doub N N 132 LCC C6 H6 sing N N 133 LCC C5 C5M sing N N 134 LCC C5 C4 sing N N 135 LCC C5M H5M1 sing N N 136 LCC C5M H5M2 sing N N 137 LCC C5M H5M3 sing N N 138 LCC C4 N4 sing N N 139 LCC C4 N3 doub N N 140 LCC N4 H41 sing N N 141 LCC N4 H42 sing N N 142 LCC N3 C2 sing N N 143 LCC C2 O2 doub N N 144 LCC "C3'" "C2'" sing N N 145 LCC "C3'" "O3'" sing N N 146 LCC "C3'" "H3'" sing N N 147 LCC "C2'" "O2'" sing N N 148 LCC "C2'" "H2'1" sing N N 149 LCC "O2'" "C6'" sing N N 150 LCC "O3'" H3T sing N N 151 LCC "C6'" "H6'1" sing N N 152 LCC "C6'" "H6'2" sing N N 153 LCC P O1P sing N N 154 LCC P O2P doub N N 155 LCC P OXT sing N N 156 LCC O1P H1P sing N N 157 LCC OXT HXT sing N N 158 LCG P OP1 doub N N 159 LCG P "O5'" sing N N 160 LCG P OP2 sing N N 161 LCG P OP3 sing N N 162 LCG "O5'" "C5'" sing N N 163 LCG "C5'" "C4'" sing N N 164 LCG "C5'" "H5'" sing N N 165 LCG "C5'" "H5''" sing N N 166 LCG "C3'" "C2'" sing N N 167 LCG "C3'" "C4'" sing N N 168 LCG "C3'" "O3'" sing N N 169 LCG "C3'" "H3'" sing N N 170 LCG "C6'" "C4'" sing N N 171 LCG "C6'" "O2'" sing N N 172 LCG "C6'" "H6'1" sing N N 173 LCG "C6'" "H6'2" sing N N 174 LCG N9 C8 sing Y N 175 LCG N9 C4 sing Y N 176 LCG N9 "C1'" sing N N 177 LCG C8 N7 doub Y N 178 LCG C8 H8 sing N N 179 LCG C4 C5 doub Y N 180 LCG C4 N3 sing N N 181 LCG N7 C5 sing Y N 182 LCG C5 C6 sing N N 183 LCG C6 O6 doub N N 184 LCG C6 N1 sing N N 185 LCG "C2'" "C1'" sing N N 186 LCG "C2'" "O2'" sing N N 187 LCG "C2'" "H2'" sing N N 188 LCG "C4'" "O4'" sing N N 189 LCG "C1'" "O4'" sing N N 190 LCG "C1'" "H1'" sing N N 191 LCG C2 N1 sing N N 192 LCG C2 N2 sing N N 193 LCG C2 N3 doub N N 194 LCG N1 H1 sing N N 195 LCG OP2 HOP2 sing N N 196 LCG N2 H21 sing N N 197 LCG N2 H22 sing N N 198 LCG "O3'" "HO3'" sing N N 199 LCG OP3 HOP3 sing N N 200 PZG O4 C8 sing N N 201 PZG C8 C9 sing N N 202 PZG C8 C7 sing N N 203 PZG C9 C10 sing N N 204 PZG C9 O2 sing N N 205 PZG C10 O5 sing N N 206 PZG O3 C7 sing N N 207 PZG O6 P1 doub N N 208 PZG C12 N6 sing Y N 209 PZG C12 C11 doub Y N 210 PZG C7 C6 sing N N 211 PZG N6 N7 sing Y N 212 PZG O2 C6 sing N N 213 PZG O5 P1 sing N N 214 PZG C6 N5 sing N N 215 PZG P1 C11 sing N N 216 PZG P1 O7 sing N N 217 PZG C11 C13 sing Y N 218 PZG N7 C13 doub Y N 219 PZG C13 C14 sing N N 220 PZG N5 C3 sing Y N 221 PZG N5 C5 sing Y N 222 PZG N3 C3 sing N N 223 PZG N3 C2 doub N N 224 PZG C3 C4 doub Y N 225 PZG C5 N4 doub Y N 226 PZG N2 C2 sing N N 227 PZG C2 N1 sing N N 228 PZG C4 N4 sing Y N 229 PZG C4 C1 sing N N 230 PZG N1 C1 sing N N 231 PZG C1 O1 doub N N 232 PZG N1 H1 sing N N 233 PZG N2 H2 sing N N 234 PZG N2 H3 sing N N 235 PZG C5 H4 sing N N 236 PZG C6 H5 sing N N 237 PZG C7 H6 sing N N 238 PZG O3 H7 sing N N 239 PZG C8 H8 sing N N 240 PZG O4 H9 sing N N 241 PZG C9 H10 sing N N 242 PZG C10 H11 sing N N 243 PZG C10 H12 sing N N 244 PZG O7 H13 sing N N 245 PZG C12 H14 sing N N 246 PZG N6 H15 sing N N 247 PZG C14 H16 sing N N 248 PZG C14 H17 sing N N 249 PZG C14 H18 sing N N 250 U OP3 P sing N N 251 U OP3 HOP3 sing N N 252 U P OP1 doub N N 253 U P OP2 sing N N 254 U P "O5'" sing N N 255 U OP2 HOP2 sing N N 256 U "O5'" "C5'" sing N N 257 U "C5'" "C4'" sing N N 258 U "C5'" "H5'" sing N N 259 U "C5'" "H5''" sing N N 260 U "C4'" "O4'" sing N N 261 U "C4'" "C3'" sing N N 262 U "C4'" "H4'" sing N N 263 U "O4'" "C1'" sing N N 264 U "C3'" "O3'" sing N N 265 U "C3'" "C2'" sing N N 266 U "C3'" "H3'" sing N N 267 U "O3'" "HO3'" sing N N 268 U "C2'" "O2'" sing N N 269 U "C2'" "C1'" sing N N 270 U "C2'" "H2'" sing N N 271 U "O2'" "HO2'" sing N N 272 U "C1'" N1 sing N N 273 U "C1'" "H1'" sing N N 274 U N1 C2 sing N N 275 U N1 C6 sing N N 276 U C2 O2 doub N N 277 U C2 N3 sing N N 278 U N3 C4 sing N N 279 U N3 H3 sing N N 280 U C4 O4 doub N N 281 U C4 C5 sing N N 282 U C5 C6 doub N N 283 U C5 H5 sing N N 284 U C6 H6 sing N N 285 # _ndb_struct_conf_na.entry_id 5KRG _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A LCG 4 1_555 B C 13 1_555 -0.244 -0.156 0.109 -1.986 -14.258 -0.642 1 A_LCG4:C13_B A 4 ? B 13 ? 19 1 1 A A 5 1_555 B U 12 1_555 0.069 -0.108 0.184 6.238 -11.226 -0.452 2 A_A5:U12_B A 5 ? B 12 ? 20 1 1 A C 6 1_555 B G 11 1_555 0.148 -0.161 -0.097 11.992 -18.255 -0.300 3 A_C6:G11_B A 6 ? B 11 ? 19 1 1 A U 7 1_555 B A 10 1_555 -0.054 -0.108 0.053 2.244 -15.492 0.353 4 A_U7:A10_B A 7 ? B 10 ? 20 1 1 A U 8 1_555 B A 9 1_555 -0.117 -0.088 0.061 0.828 -11.960 0.150 5 A_U8:A9_B A 8 ? B 9 ? 20 1 1 A A 9 1_555 B U 8 1_555 0.086 -0.056 0.047 -0.732 -14.583 4.511 6 A_A9:U8_B A 9 ? B 8 ? 20 1 1 A A 10 1_555 B U 7 1_555 0.122 -0.123 0.037 -1.560 -13.538 1.338 7 A_A10:U7_B A 10 ? B 7 ? 20 1 1 A G 11 1_555 B C 6 1_555 -0.224 -0.214 -0.102 -10.157 -17.078 -0.225 8 A_G11:C6_B A 11 ? B 6 ? 19 1 1 A U 12 1_555 B A 5 1_555 0.006 -0.080 0.210 -5.082 -10.389 -1.346 9 A_U12:A5_B A 12 ? B 5 ? 20 1 1 A C 13 1_555 B LCG 4 1_555 0.138 -0.164 0.089 1.712 -11.146 -1.012 10 A_C13:LCG4_B A 13 ? B 4 ? 19 1 1 C LCG 4 1_555 D C 13 1_555 -0.220 -0.168 0.105 -2.321 -14.860 -1.091 11 C_LCG4:C13_D C 4 ? D 13 ? 19 1 1 C A 5 1_555 D U 12 1_555 0.088 -0.113 0.265 6.902 -10.290 -0.967 12 C_A5:U12_D C 5 ? D 12 ? 20 1 1 C C 6 1_555 D G 11 1_555 0.224 -0.160 -0.059 12.081 -17.454 0.408 13 C_C6:G11_D C 6 ? D 11 ? 19 1 1 C U 7 1_555 D A 10 1_555 -0.040 -0.108 -0.017 2.498 -15.800 0.945 14 C_U7:A10_D C 7 ? D 10 ? 20 1 1 C U 8 1_555 D A 9 1_555 -0.111 -0.099 0.055 0.878 -11.882 -0.096 15 C_U8:A9_D C 8 ? D 9 ? 20 1 1 C A 9 1_555 D U 8 1_555 0.065 -0.088 0.107 -0.983 -15.003 4.373 16 C_A9:U8_D C 9 ? D 8 ? 20 1 1 C A 10 1_555 D U 7 1_555 0.154 -0.132 0.046 -2.270 -13.570 2.781 17 C_A10:U7_D C 10 ? D 7 ? 20 1 1 C G 11 1_555 D C 6 1_555 -0.156 -0.188 -0.148 -10.167 -17.845 -0.606 18 C_G11:C6_D C 11 ? D 6 ? 19 1 1 C U 12 1_555 D A 5 1_555 -0.004 -0.102 0.186 -4.718 -10.412 -1.761 19 C_U12:A5_D C 12 ? D 5 ? 20 1 1 C C 13 1_555 D LCG 4 1_555 0.293 -0.135 0.078 1.274 -11.563 -0.674 20 C_C13:LCG4_D C 13 ? D 4 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A LCG 4 1_555 B C 13 1_555 A A 5 1_555 B U 12 1_555 0.068 -1.313 3.072 0.012 2.058 31.100 -2.807 -0.125 2.981 3.833 -0.023 31.166 1 AA_LCG4A5:U12C13_BB A 4 ? B 13 ? A 5 ? B 12 ? 1 A A 5 1_555 B U 12 1_555 A C 6 1_555 B G 11 1_555 0.420 -1.428 3.086 2.146 3.281 32.570 -3.051 -0.402 2.953 5.825 -3.809 32.798 2 AA_A5C6:G11U12_BB A 5 ? B 12 ? A 6 ? B 11 ? 1 A C 6 1_555 B G 11 1_555 A U 7 1_555 B A 10 1_555 -0.636 -1.961 3.422 -5.113 12.862 30.730 -5.382 0.307 2.496 22.870 9.092 33.635 3 AA_C6U7:A10G11_BB A 6 ? B 11 ? A 7 ? B 10 ? 1 A U 7 1_555 B A 10 1_555 A U 8 1_555 B A 9 1_555 -0.265 -1.254 3.255 -2.056 8.803 31.513 -3.662 0.134 2.823 15.806 3.691 32.752 4 AA_U7U8:A9A10_BB A 7 ? B 10 ? A 8 ? B 9 ? 1 A U 8 1_555 B A 9 1_555 A A 9 1_555 B U 8 1_555 0.512 -1.465 3.176 1.622 16.712 31.255 -4.556 -0.635 2.164 28.581 -2.774 35.380 5 AA_U8A9:U8A9_BB A 8 ? B 9 ? A 9 ? B 8 ? 1 A A 9 1_555 B U 8 1_555 A A 10 1_555 B U 7 1_555 -0.283 -1.456 3.268 -0.238 5.673 33.200 -3.403 0.452 2.987 9.839 0.412 33.669 6 AA_A9A10:U7U8_BB A 9 ? B 8 ? A 10 ? B 7 ? 1 A A 10 1_555 B U 7 1_555 A G 11 1_555 B C 6 1_555 0.118 -1.639 3.451 2.713 10.302 30.126 -4.811 0.267 2.755 19.085 -5.026 31.913 7 AA_A10G11:C6U7_BB A 10 ? B 7 ? A 11 ? B 6 ? 1 A G 11 1_555 B C 6 1_555 A U 12 1_555 B A 5 1_555 -0.159 -1.337 3.126 -2.378 3.075 32.575 -2.863 -0.101 2.994 5.457 4.220 32.800 8 AA_G11U12:A5C6_BB A 11 ? B 6 ? A 12 ? B 5 ? 1 A U 12 1_555 B A 5 1_555 A C 13 1_555 B LCG 4 1_555 0.210 -1.464 3.129 1.386 3.352 30.951 -3.322 -0.145 2.965 6.254 -2.586 31.157 9 AA_U12C13:LCG4A5_BB A 12 ? B 5 ? A 13 ? B 4 ? 1 C LCG 4 1_555 D C 13 1_555 C A 5 1_555 D U 12 1_555 0.041 -1.322 3.035 -0.725 2.047 31.055 -2.821 -0.202 2.943 3.817 1.352 31.129 10 CC_LCG4A5:U12C13_DD C 4 ? D 13 ? C 5 ? D 12 ? 1 C A 5 1_555 D U 12 1_555 C C 6 1_555 D G 11 1_555 0.486 -1.462 3.109 2.448 3.372 32.812 -3.101 -0.468 2.975 5.940 -4.311 33.068 11 CC_A5C6:G11U12_DD C 5 ? D 12 ? C 6 ? D 11 ? 1 C C 6 1_555 D G 11 1_555 C U 7 1_555 D A 10 1_555 -0.668 -1.919 3.426 -3.887 12.502 30.045 -5.458 0.549 2.515 22.803 7.090 32.714 12 CC_C6U7:A10G11_DD C 6 ? D 11 ? C 7 ? D 10 ? 1 C U 7 1_555 D A 10 1_555 C U 8 1_555 D A 9 1_555 -0.254 -1.244 3.268 -2.781 9.637 31.707 -3.708 0.003 2.792 17.111 4.938 33.217 13 CC_U7U8:A9A10_DD C 7 ? D 10 ? C 8 ? D 9 ? 1 C U 8 1_555 D A 9 1_555 C A 9 1_555 D U 8 1_555 0.534 -1.468 3.175 1.260 16.396 31.427 -4.524 -0.717 2.186 28.000 -2.151 35.373 14 CC_U8A9:U8A9_DD C 8 ? D 9 ? C 9 ? D 8 ? 1 C A 9 1_555 D U 8 1_555 C A 10 1_555 D U 7 1_555 -0.248 -1.415 3.285 0.211 5.334 32.968 -3.322 0.466 3.024 9.322 -0.369 33.385 15 CC_A9A10:U7U8_DD C 9 ? D 8 ? C 10 ? D 7 ? 1 C A 10 1_555 D U 7 1_555 C G 11 1_555 D C 6 1_555 0.053 -1.631 3.418 3.170 10.909 30.657 -4.727 0.437 2.688 19.800 -5.753 32.647 16 CC_A10G11:C6U7_DD C 10 ? D 7 ? C 11 ? D 6 ? 1 C G 11 1_555 D C 6 1_555 C U 12 1_555 D A 5 1_555 -0.173 -1.367 3.121 -2.682 3.291 31.969 -3.010 -0.135 2.973 5.943 4.844 32.242 17 CC_G11U12:A5C6_DD C 11 ? D 6 ? C 12 ? D 5 ? 1 C U 12 1_555 D A 5 1_555 C C 13 1_555 D LCG 4 1_555 0.247 -1.452 3.160 1.262 3.613 31.868 -3.238 -0.234 2.988 6.551 -2.288 32.091 18 CC_U12C13:LCG4A5_DD C 12 ? D 5 ? C 13 ? D 4 ? # _pdbx_audit_support.funding_organization 'Howard Hughes Medical Institute (HHMI)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-(3-methyl-1~{H}-pyrazol-4-yl)phosphinic acid ; PZG 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4NFO _pdbx_initial_refinement_model.details ? #