data_5LYC # _entry.id 5LYC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.315 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5LYC WWPDB D_1200000794 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5LYC _pdbx_database_status.recvd_initial_deposition_date 2016-09-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rennie, M.L.' 1 'Crowley, P.B.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country GE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Angew. Chem. Int. Ed. Engl.' _citation.journal_id_ASTM ACIEAY _citation.journal_id_CSD 0179 _citation.journal_id_ISSN 1521-3773 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 56 _citation.language ? _citation.page_first 5517 _citation.page_last 5521 _citation.title 'Protein Dimerization on a Phosphonated Calix[6]arene Disc.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/anie.201701500 _citation.pdbx_database_id_PubMed 28407337 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rennie, M.L.' 1 ? primary 'Doolan, A.M.' 2 ? primary 'Raston, C.L.' 3 ? primary 'Crowley, P.B.' 4 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5LYC _cell.details ? _cell.formula_units_Z ? _cell.length_a 54.570 _cell.length_a_esd ? _cell.length_b 54.570 _cell.length_b_esd ? _cell.length_c 208.010 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LYC _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cytochrome c iso-1' 12041.770 2 ? C102T ? ? 2 non-polymer syn 'HEME C' 618.503 2 ? ? ? ? 3 non-polymer syn 'phosphonato-calix[6]arene' 1116.611 2 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 5 ? ? ? ? 5 water nat water 18.015 180 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AEFKAGSAKKGATLFKTRCLQCHTVEKGGPHKVGPNLHGIFGRHSGQAEGYSYTDANIKKNVLWDENNMSEYLTNPKKYI PGTKMAFGGLKKEKDRNDLITYLKKATE ; _entity_poly.pdbx_seq_one_letter_code_can ;AEFKAGSAKKGATLFKTRCLQCHTVEKGGPHKVGPNLHGIFGRHSGQAEGYSYTDANIKKNVLWDENNMSEYLTNPKKYI PGTKMAFGGLKKEKDRNDLITYLKKATE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 GLU n 1 3 PHE n 1 4 LYS n 1 5 ALA n 1 6 GLY n 1 7 SER n 1 8 ALA n 1 9 LYS n 1 10 LYS n 1 11 GLY n 1 12 ALA n 1 13 THR n 1 14 LEU n 1 15 PHE n 1 16 LYS n 1 17 THR n 1 18 ARG n 1 19 CYS n 1 20 LEU n 1 21 GLN n 1 22 CYS n 1 23 HIS n 1 24 THR n 1 25 VAL n 1 26 GLU n 1 27 LYS n 1 28 GLY n 1 29 GLY n 1 30 PRO n 1 31 HIS n 1 32 LYS n 1 33 VAL n 1 34 GLY n 1 35 PRO n 1 36 ASN n 1 37 LEU n 1 38 HIS n 1 39 GLY n 1 40 ILE n 1 41 PHE n 1 42 GLY n 1 43 ARG n 1 44 HIS n 1 45 SER n 1 46 GLY n 1 47 GLN n 1 48 ALA n 1 49 GLU n 1 50 GLY n 1 51 TYR n 1 52 SER n 1 53 TYR n 1 54 THR n 1 55 ASP n 1 56 ALA n 1 57 ASN n 1 58 ILE n 1 59 LYS n 1 60 LYS n 1 61 ASN n 1 62 VAL n 1 63 LEU n 1 64 TRP n 1 65 ASP n 1 66 GLU n 1 67 ASN n 1 68 ASN n 1 69 MET n 1 70 SER n 1 71 GLU n 1 72 TYR n 1 73 LEU n 1 74 THR n 1 75 ASN n 1 76 PRO n 1 77 LYS n 1 78 LYS n 1 79 TYR n 1 80 ILE n 1 81 PRO n 1 82 GLY n 1 83 THR n 1 84 LYS n 1 85 MET n 1 86 ALA n 1 87 PHE n 1 88 GLY n 1 89 GLY n 1 90 LEU n 1 91 LYS n 1 92 LYS n 1 93 GLU n 1 94 LYS n 1 95 ASP n 1 96 ARG n 1 97 ASN n 1 98 ASP n 1 99 LEU n 1 100 ILE n 1 101 THR n 1 102 TYR n 1 103 LEU n 1 104 LYS n 1 105 LYS n 1 106 ALA n 1 107 THR n 1 108 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 108 _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CYC1, YJR048W, J1653' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 204508 / S288c' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae (strain ATCC 204508 / S288c)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 559292 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CYC1_YEAST _struct_ref.pdbx_db_accession P00044 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EFKAGSAKKGATLFKTRCLQCHTVEKGGPHKVGPNLHGIFGRHSGQAEGYSYTDANIKKNVLWDENNMSEYLTNPKKYIP GTKMAFGGLKKEKDRNDLITYLKKACE ; _struct_ref.pdbx_align_begin 3 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5LYC A 2 ? 108 ? P00044 3 ? 109 ? -4 103 2 1 5LYC B 2 ? 108 ? P00044 3 ? 109 ? -4 103 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5LYC ALA A 1 ? UNP P00044 ? ? 'expression tag' -5 1 1 5LYC THR A 107 ? UNP P00044 CYS 108 'engineered mutation' 102 2 2 5LYC ALA B 1 ? UNP P00044 ? ? 'expression tag' -5 3 2 5LYC THR B 107 ? UNP P00044 CYS 108 'engineered mutation' 102 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 7AZ non-polymer . 'phosphonato-calix[6]arene' ? 'C42 H42 O24 P6' 1116.611 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEC non-polymer . 'HEME C' ? 'C34 H34 Fe N4 O4' 618.503 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5LYC _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.22 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 61.74 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;3.15M ammonium sulfate 100 mM sodium citrate pH 5.0 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-07-16 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9786 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SOLEIL BEAMLINE PROXIMA 2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9786 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'PROXIMA 2' _diffrn_source.pdbx_synchrotron_site SOLEIL # _reflns.B_iso_Wilson_estimate 20.0 _reflns.entry_id 5LYC _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.8 _reflns.d_resolution_low 69.34 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 30379 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.1 _reflns.pdbx_Rmerge_I_obs 0.12 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.84 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 99.9 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.90 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 8.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.459 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 0.1600 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 0.1600 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -0.3200 _refine.B_iso_max 82.230 _refine.B_iso_mean 27.0170 _refine.B_iso_min 8.640 _refine.correlation_coeff_Fo_to_Fc 0.9670 _refine.correlation_coeff_Fo_to_Fc_free 0.9540 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5LYC _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.8000 _refine.ls_d_res_low 52.7800 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 28686 _refine.ls_number_reflns_R_free 1595 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.9700 _refine.ls_percent_reflns_R_free 5.3000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1701 _refine.ls_R_factor_R_free 0.1994 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1685 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1020 _refine.pdbx_overall_ESU_R_Free 0.1010 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 4.8520 _refine.overall_SU_ML 0.0720 _refine.overall_SU_R_Cruickshank_DPI 0.1022 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.8000 _refine_hist.d_res_low 52.7800 _refine_hist.pdbx_number_atoms_ligand 255 _refine_hist.number_atoms_solvent 183 _refine_hist.number_atoms_total 2125 _refine_hist.pdbx_number_residues_total 215 _refine_hist.pdbx_B_iso_mean_ligand 28.77 _refine_hist.pdbx_B_iso_mean_solvent 36.48 _refine_hist.pdbx_number_atoms_protein 1687 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.014 0.019 2075 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 1875 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.796 2.129 2856 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.016 3.002 4337 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.900 5.000 233 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 30.538 24.545 77 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 13.821 15.000 355 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 9.540 15.000 7 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.114 0.200 258 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.012 0.020 2270 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.010 0.020 469 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.925 1.653 878 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 0.895 1.651 877 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 1.448 2.467 1099 ? r_mcangle_it ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.8000 _refine_ls_shell.d_res_low 1.8470 _refine_ls_shell.number_reflns_all 2172 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 115 _refine_ls_shell.number_reflns_R_work 2057 _refine_ls_shell.percent_reflns_obs 99.8600 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3380 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2990 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5LYC _struct.title 'Cytochrome c in complex with phosphonato-calix[6]arene' _struct.pdbx_descriptor 'Cytochrome c iso-1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5LYC _struct_keywords.text 'Calixarene, dimer, surface-binding, oxidoreductase' _struct_keywords.pdbx_keywords OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 2 ? H N N 3 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 5 ? M N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 7 ? CYS A 19 ? SER A 2 CYS A 14 1 ? 13 HELX_P HELX_P2 AA2 THR A 54 ? ASN A 61 ? THR A 49 ASN A 56 1 ? 8 HELX_P HELX_P3 AA3 ASP A 65 ? ASN A 75 ? ASP A 60 ASN A 70 1 ? 11 HELX_P HELX_P4 AA4 ASN A 75 ? ILE A 80 ? ASN A 70 ILE A 75 1 ? 6 HELX_P HELX_P5 AA5 LYS A 92 ? GLU A 108 ? LYS A 87 GLU A 103 1 ? 17 HELX_P HELX_P6 AA6 SER B 7 ? CYS B 19 ? SER B 2 CYS B 14 1 ? 13 HELX_P HELX_P7 AA7 GLY B 39 ? ARG B 43 ? GLY B 34 ARG B 38 5 ? 5 HELX_P HELX_P8 AA8 THR B 54 ? ASN B 61 ? THR B 49 ASN B 56 1 ? 8 HELX_P HELX_P9 AA9 ASP B 65 ? ASN B 75 ? ASP B 60 ASN B 70 1 ? 11 HELX_P HELX_P10 AB1 ASN B 75 ? ILE B 80 ? ASN B 70 ILE B 75 1 ? 6 HELX_P HELX_P11 AB2 LYS B 92 ? THR B 107 ? LYS B 87 THR B 102 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale none ? A CYS 19 SG ? ? ? 1_555 C HEC . CAB ? ? A CYS 14 A HEC 201 1_555 ? ? ? ? ? ? ? 1.823 ? covale2 covale none ? A CYS 22 SG ? ? ? 1_555 C HEC . CAC ? ? A CYS 17 A HEC 201 1_555 ? ? ? ? ? ? ? 1.925 ? metalc1 metalc ? ? A HIS 23 NE2 ? ? ? 1_555 C HEC . FE ? ? A HIS 18 A HEC 201 1_555 ? ? ? ? ? ? ? 2.011 ? metalc2 metalc ? ? A MET 85 SD ? ? ? 1_555 C HEC . FE ? ? A MET 80 A HEC 201 1_555 ? ? ? ? ? ? ? 2.302 ? covale3 covale none ? B CYS 19 SG ? ? ? 1_555 G HEC . CAB ? ? B CYS 14 B HEC 201 1_555 ? ? ? ? ? ? ? 1.814 ? covale4 covale none ? B CYS 22 SG ? ? ? 1_555 G HEC . CAC ? ? B CYS 17 B HEC 201 1_555 ? ? ? ? ? ? ? 1.915 ? metalc3 metalc ? ? B HIS 23 NE2 ? ? ? 1_555 G HEC . FE ? ? B HIS 18 B HEC 201 1_555 ? ? ? ? ? ? ? 1.988 ? metalc4 metalc ? ? B MET 85 SD ? ? ? 1_555 G HEC . FE ? ? B MET 80 B HEC 201 1_555 ? ? ? ? ? ? ? 2.311 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A HEC 201 ? 21 'binding site for residue HEC A 201' AC2 Software A 7AZ 202 ? 13 'binding site for residue 7AZ A 202' AC3 Software A SO4 203 ? 3 'binding site for residue SO4 A 203' AC4 Software A SO4 204 ? 2 'binding site for residue SO4 A 204' AC5 Software B 7AZ 202 ? 15 'binding site for residue 7AZ B 202' AC6 Software B SO4 203 ? 3 'binding site for residue SO4 B 203' AC7 Software B SO4 204 ? 4 'binding site for residue SO4 B 204' AC8 Software B SO4 205 ? 3 'binding site for residue SO4 B 205' AC9 Software B HEC 201 ? 24 'binding site for Di-peptide HEM B 201 and CYS B 17' AD1 Software B HEC 201 ? 23 'binding site for Di-peptide HEM B 201 and CYS B 14' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 21 ARG A 18 ? ARG A 13 . ? 1_555 ? 2 AC1 21 CYS A 19 ? CYS A 14 . ? 1_555 ? 3 AC1 21 CYS A 22 ? CYS A 17 . ? 1_555 ? 4 AC1 21 HIS A 23 ? HIS A 18 . ? 1_555 ? 5 AC1 21 VAL A 33 ? VAL A 28 . ? 1_555 ? 6 AC1 21 ILE A 40 ? ILE A 35 . ? 1_555 ? 7 AC1 21 SER A 45 ? SER A 40 . ? 1_555 ? 8 AC1 21 GLY A 46 ? GLY A 41 . ? 1_555 ? 9 AC1 21 TYR A 51 ? TYR A 46 . ? 1_555 ? 10 AC1 21 TYR A 53 ? TYR A 48 . ? 1_555 ? 11 AC1 21 THR A 54 ? THR A 49 . ? 1_555 ? 12 AC1 21 ASN A 57 ? ASN A 52 . ? 1_555 ? 13 AC1 21 TRP A 64 ? TRP A 59 . ? 1_555 ? 14 AC1 21 MET A 69 ? MET A 64 . ? 1_555 ? 15 AC1 21 TYR A 72 ? TYR A 67 . ? 1_555 ? 16 AC1 21 THR A 83 ? THR A 78 . ? 1_555 ? 17 AC1 21 LYS A 84 ? LYS A 79 . ? 1_555 ? 18 AC1 21 MET A 85 ? MET A 80 . ? 1_555 ? 19 AC1 21 PHE A 87 ? PHE A 82 . ? 1_555 ? 20 AC1 21 HOH L . ? HOH A 335 . ? 1_555 ? 21 AC1 21 HOH L . ? HOH A 341 . ? 1_555 ? 22 AC2 13 SER A 7 ? SER A 2 . ? 1_555 ? 23 AC2 13 ALA A 8 ? ALA A 3 . ? 1_555 ? 24 AC2 13 LYS A 9 ? LYS A 4 . ? 1_555 ? 25 AC2 13 ALA A 12 ? ALA A 7 . ? 1_555 ? 26 AC2 13 LYS A 16 ? LYS A 11 . ? 1_555 ? 27 AC2 13 TYR A 102 ? TYR A 97 . ? 1_555 ? 28 AC2 13 LYS A 105 ? LYS A 100 . ? 1_555 ? 29 AC2 13 GLU A 108 ? GLU A 103 . ? 1_555 ? 30 AC2 13 HOH L . ? HOH A 311 . ? 1_555 ? 31 AC2 13 HOH L . ? HOH A 312 . ? 1_555 ? 32 AC2 13 LYS B 9 ? LYS B 4 . ? 5_454 ? 33 AC2 13 LYS B 105 ? LYS B 100 . ? 5_454 ? 34 AC2 13 7AZ H . ? 7AZ B 202 . ? 5_454 ? 35 AC3 3 ARG A 43 ? ARG A 38 . ? 1_555 ? 36 AC3 3 HIS A 44 ? HIS A 39 . ? 1_555 ? 37 AC3 3 GLN A 47 ? GLN A 42 . ? 1_555 ? 38 AC4 2 LYS A 27 ? LYS A 22 . ? 1_555 ? 39 AC4 2 HIS A 38 ? HIS A 33 . ? 1_555 ? 40 AC5 15 LYS A 9 ? LYS A 4 . ? 5_444 ? 41 AC5 15 LYS A 105 ? LYS A 100 . ? 5_444 ? 42 AC5 15 7AZ D . ? 7AZ A 202 . ? 5_444 ? 43 AC5 15 HOH L . ? HOH A 311 . ? 5_444 ? 44 AC5 15 SER B 7 ? SER B 2 . ? 1_555 ? 45 AC5 15 ALA B 8 ? ALA B 3 . ? 1_555 ? 46 AC5 15 LYS B 9 ? LYS B 4 . ? 1_555 ? 47 AC5 15 ALA B 12 ? ALA B 7 . ? 1_555 ? 48 AC5 15 LYS B 16 ? LYS B 11 . ? 1_555 ? 49 AC5 15 TYR B 102 ? TYR B 97 . ? 1_555 ? 50 AC5 15 LYS B 105 ? LYS B 100 . ? 1_555 ? 51 AC5 15 GLU B 108 ? GLU B 103 . ? 1_555 ? 52 AC5 15 HOH M . ? HOH B 310 . ? 1_555 ? 53 AC5 15 HOH M . ? HOH B 315 . ? 1_555 ? 54 AC5 15 HOH M . ? HOH B 327 . ? 1_555 ? 55 AC6 3 ARG B 43 ? ARG B 38 . ? 1_555 ? 56 AC6 3 HIS B 44 ? HIS B 39 . ? 1_555 ? 57 AC6 3 GLN B 47 ? GLN B 42 . ? 1_555 ? 58 AC7 4 ARG B 18 ? ARG B 13 . ? 1_555 ? 59 AC7 4 LYS B 91 ? LYS B 86 . ? 1_555 ? 60 AC7 4 HOH M . ? HOH B 333 . ? 1_555 ? 61 AC7 4 HOH M . ? HOH B 353 . ? 1_555 ? 62 AC8 3 HOH L . ? HOH A 303 . ? 5_544 ? 63 AC8 3 LYS B 27 ? LYS B 22 . ? 1_555 ? 64 AC8 3 HIS B 38 ? HIS B 33 . ? 1_555 ? 65 AC9 24 ARG B 18 ? ARG B 13 . ? 1_555 ? 66 AC9 24 CYS B 19 ? CYS B 14 . ? 1_555 ? 67 AC9 24 LEU B 20 ? LEU B 15 . ? 1_555 ? 68 AC9 24 GLN B 21 ? GLN B 16 . ? 1_555 ? 69 AC9 24 HIS B 23 ? HIS B 18 . ? 1_555 ? 70 AC9 24 LYS B 32 ? LYS B 27 . ? 1_555 ? 71 AC9 24 VAL B 33 ? VAL B 28 . ? 1_555 ? 72 AC9 24 GLY B 34 ? GLY B 29 . ? 1_555 ? 73 AC9 24 ILE B 40 ? ILE B 35 . ? 1_555 ? 74 AC9 24 SER B 45 ? SER B 40 . ? 1_555 ? 75 AC9 24 GLY B 46 ? GLY B 41 . ? 1_555 ? 76 AC9 24 TYR B 51 ? TYR B 46 . ? 1_555 ? 77 AC9 24 TYR B 53 ? TYR B 48 . ? 1_555 ? 78 AC9 24 THR B 54 ? THR B 49 . ? 1_555 ? 79 AC9 24 ASN B 57 ? ASN B 52 . ? 1_555 ? 80 AC9 24 TRP B 64 ? TRP B 59 . ? 1_555 ? 81 AC9 24 MET B 69 ? MET B 64 . ? 1_555 ? 82 AC9 24 TYR B 72 ? TYR B 67 . ? 1_555 ? 83 AC9 24 THR B 83 ? THR B 78 . ? 1_555 ? 84 AC9 24 LYS B 84 ? LYS B 79 . ? 1_555 ? 85 AC9 24 MET B 85 ? MET B 80 . ? 1_555 ? 86 AC9 24 LEU B 99 ? LEU B 94 . ? 1_555 ? 87 AC9 24 HOH M . ? HOH B 338 . ? 1_555 ? 88 AC9 24 HOH M . ? HOH B 339 . ? 1_555 ? 89 AD1 23 PHE B 15 ? PHE B 10 . ? 1_555 ? 90 AD1 23 ARG B 18 ? ARG B 13 . ? 1_555 ? 91 AD1 23 LEU B 20 ? LEU B 15 . ? 1_555 ? 92 AD1 23 GLN B 21 ? GLN B 16 . ? 1_555 ? 93 AD1 23 CYS B 22 ? CYS B 17 . ? 1_555 ? 94 AD1 23 HIS B 23 ? HIS B 18 . ? 1_555 ? 95 AD1 23 VAL B 33 ? VAL B 28 . ? 1_555 ? 96 AD1 23 ILE B 40 ? ILE B 35 . ? 1_555 ? 97 AD1 23 SER B 45 ? SER B 40 . ? 1_555 ? 98 AD1 23 GLY B 46 ? GLY B 41 . ? 1_555 ? 99 AD1 23 TYR B 51 ? TYR B 46 . ? 1_555 ? 100 AD1 23 TYR B 53 ? TYR B 48 . ? 1_555 ? 101 AD1 23 THR B 54 ? THR B 49 . ? 1_555 ? 102 AD1 23 ASN B 57 ? ASN B 52 . ? 1_555 ? 103 AD1 23 TRP B 64 ? TRP B 59 . ? 1_555 ? 104 AD1 23 MET B 69 ? MET B 64 . ? 1_555 ? 105 AD1 23 TYR B 72 ? TYR B 67 . ? 1_555 ? 106 AD1 23 THR B 83 ? THR B 78 . ? 1_555 ? 107 AD1 23 LYS B 84 ? LYS B 79 . ? 1_555 ? 108 AD1 23 MET B 85 ? MET B 80 . ? 1_555 ? 109 AD1 23 LEU B 99 ? LEU B 94 . ? 1_555 ? 110 AD1 23 HOH M . ? HOH B 338 . ? 1_555 ? 111 AD1 23 HOH M . ? HOH B 339 . ? 1_555 ? # _atom_sites.entry_id 5LYC _atom_sites.fract_transf_matrix[1][1] 0.018325 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018325 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004807 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C FE N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 -5 ? ? ? A . n A 1 2 GLU 2 -4 -4 GLU GLU A . n A 1 3 PHE 3 -3 -3 PHE PHE A . n A 1 4 LYS 4 -2 -2 LYS LYS A . n A 1 5 ALA 5 -1 -1 ALA ALA A . n A 1 6 GLY 6 1 1 GLY GLY A . n A 1 7 SER 7 2 2 SER SER A . n A 1 8 ALA 8 3 3 ALA ALA A . n A 1 9 LYS 9 4 4 LYS LYS A . n A 1 10 LYS 10 5 5 LYS LYS A . n A 1 11 GLY 11 6 6 GLY GLY A . n A 1 12 ALA 12 7 7 ALA ALA A . n A 1 13 THR 13 8 8 THR THR A . n A 1 14 LEU 14 9 9 LEU LEU A . n A 1 15 PHE 15 10 10 PHE PHE A . n A 1 16 LYS 16 11 11 LYS LYS A . n A 1 17 THR 17 12 12 THR THR A . n A 1 18 ARG 18 13 13 ARG ARG A . n A 1 19 CYS 19 14 14 CYS CYS A . n A 1 20 LEU 20 15 15 LEU LEU A . n A 1 21 GLN 21 16 16 GLN GLN A . n A 1 22 CYS 22 17 17 CYS CYS A . n A 1 23 HIS 23 18 18 HIS HIS A . n A 1 24 THR 24 19 19 THR THR A . n A 1 25 VAL 25 20 20 VAL VAL A . n A 1 26 GLU 26 21 21 GLU GLU A . n A 1 27 LYS 27 22 22 LYS LYS A . n A 1 28 GLY 28 23 23 GLY GLY A . n A 1 29 GLY 29 24 24 GLY GLY A . n A 1 30 PRO 30 25 25 PRO PRO A . n A 1 31 HIS 31 26 26 HIS HIS A . n A 1 32 LYS 32 27 27 LYS LYS A . n A 1 33 VAL 33 28 28 VAL VAL A . n A 1 34 GLY 34 29 29 GLY GLY A . n A 1 35 PRO 35 30 30 PRO PRO A . n A 1 36 ASN 36 31 31 ASN ASN A . n A 1 37 LEU 37 32 32 LEU LEU A . n A 1 38 HIS 38 33 33 HIS HIS A . n A 1 39 GLY 39 34 34 GLY GLY A . n A 1 40 ILE 40 35 35 ILE ILE A . n A 1 41 PHE 41 36 36 PHE PHE A . n A 1 42 GLY 42 37 37 GLY GLY A . n A 1 43 ARG 43 38 38 ARG ARG A . n A 1 44 HIS 44 39 39 HIS HIS A . n A 1 45 SER 45 40 40 SER SER A . n A 1 46 GLY 46 41 41 GLY GLY A . n A 1 47 GLN 47 42 42 GLN GLN A . n A 1 48 ALA 48 43 43 ALA ALA A . n A 1 49 GLU 49 44 44 GLU GLU A . n A 1 50 GLY 50 45 45 GLY GLY A . n A 1 51 TYR 51 46 46 TYR TYR A . n A 1 52 SER 52 47 47 SER SER A . n A 1 53 TYR 53 48 48 TYR TYR A . n A 1 54 THR 54 49 49 THR THR A . n A 1 55 ASP 55 50 50 ASP ASP A . n A 1 56 ALA 56 51 51 ALA ALA A . n A 1 57 ASN 57 52 52 ASN ASN A . n A 1 58 ILE 58 53 53 ILE ILE A . n A 1 59 LYS 59 54 54 LYS LYS A . n A 1 60 LYS 60 55 55 LYS LYS A . n A 1 61 ASN 61 56 56 ASN ASN A . n A 1 62 VAL 62 57 57 VAL VAL A . n A 1 63 LEU 63 58 58 LEU LEU A . n A 1 64 TRP 64 59 59 TRP TRP A . n A 1 65 ASP 65 60 60 ASP ASP A . n A 1 66 GLU 66 61 61 GLU GLU A . n A 1 67 ASN 67 62 62 ASN ASN A . n A 1 68 ASN 68 63 63 ASN ASN A . n A 1 69 MET 69 64 64 MET MET A . n A 1 70 SER 70 65 65 SER SER A . n A 1 71 GLU 71 66 66 GLU GLU A . n A 1 72 TYR 72 67 67 TYR TYR A . n A 1 73 LEU 73 68 68 LEU LEU A . n A 1 74 THR 74 69 69 THR THR A . n A 1 75 ASN 75 70 70 ASN ASN A . n A 1 76 PRO 76 71 71 PRO PRO A . n A 1 77 LYS 77 72 72 LYS LYS A . n A 1 78 LYS 78 73 73 LYS LYS A . n A 1 79 TYR 79 74 74 TYR TYR A . n A 1 80 ILE 80 75 75 ILE ILE A . n A 1 81 PRO 81 76 76 PRO PRO A . n A 1 82 GLY 82 77 77 GLY GLY A . n A 1 83 THR 83 78 78 THR THR A . n A 1 84 LYS 84 79 79 LYS LYS A . n A 1 85 MET 85 80 80 MET MET A . n A 1 86 ALA 86 81 81 ALA ALA A . n A 1 87 PHE 87 82 82 PHE PHE A . n A 1 88 GLY 88 83 83 GLY GLY A . n A 1 89 GLY 89 84 84 GLY GLY A . n A 1 90 LEU 90 85 85 LEU LEU A . n A 1 91 LYS 91 86 86 LYS LYS A . n A 1 92 LYS 92 87 87 LYS LYS A . n A 1 93 GLU 93 88 88 GLU GLU A . n A 1 94 LYS 94 89 89 LYS LYS A . n A 1 95 ASP 95 90 90 ASP ASP A . n A 1 96 ARG 96 91 91 ARG ARG A . n A 1 97 ASN 97 92 92 ASN ASN A . n A 1 98 ASP 98 93 93 ASP ASP A . n A 1 99 LEU 99 94 94 LEU LEU A . n A 1 100 ILE 100 95 95 ILE ILE A . n A 1 101 THR 101 96 96 THR THR A . n A 1 102 TYR 102 97 97 TYR TYR A . n A 1 103 LEU 103 98 98 LEU LEU A . n A 1 104 LYS 104 99 99 LYS LYS A . n A 1 105 LYS 105 100 100 LYS LYS A . n A 1 106 ALA 106 101 101 ALA ALA A . n A 1 107 THR 107 102 102 THR THR A . n A 1 108 GLU 108 103 103 GLU GLU A . n B 1 1 ALA 1 -5 -5 ALA ALA B . n B 1 2 GLU 2 -4 -4 GLU GLU B . n B 1 3 PHE 3 -3 -3 PHE PHE B . n B 1 4 LYS 4 -2 -2 LYS LYS B . n B 1 5 ALA 5 -1 -1 ALA ALA B . n B 1 6 GLY 6 1 1 GLY GLY B . n B 1 7 SER 7 2 2 SER SER B . n B 1 8 ALA 8 3 3 ALA ALA B . n B 1 9 LYS 9 4 4 LYS LYS B . n B 1 10 LYS 10 5 5 LYS LYS B . n B 1 11 GLY 11 6 6 GLY GLY B . n B 1 12 ALA 12 7 7 ALA ALA B . n B 1 13 THR 13 8 8 THR THR B . n B 1 14 LEU 14 9 9 LEU LEU B . n B 1 15 PHE 15 10 10 PHE PHE B . n B 1 16 LYS 16 11 11 LYS LYS B . n B 1 17 THR 17 12 12 THR THR B . n B 1 18 ARG 18 13 13 ARG ARG B . n B 1 19 CYS 19 14 14 CYS CYS B . n B 1 20 LEU 20 15 15 LEU LEU B . n B 1 21 GLN 21 16 16 GLN GLN B . n B 1 22 CYS 22 17 17 CYS CYS B . n B 1 23 HIS 23 18 18 HIS HIS B . n B 1 24 THR 24 19 19 THR THR B . n B 1 25 VAL 25 20 20 VAL VAL B . n B 1 26 GLU 26 21 21 GLU GLU B . n B 1 27 LYS 27 22 22 LYS LYS B . n B 1 28 GLY 28 23 23 GLY GLY B . n B 1 29 GLY 29 24 24 GLY GLY B . n B 1 30 PRO 30 25 25 PRO PRO B . n B 1 31 HIS 31 26 26 HIS HIS B . n B 1 32 LYS 32 27 27 LYS LYS B . n B 1 33 VAL 33 28 28 VAL VAL B . n B 1 34 GLY 34 29 29 GLY GLY B . n B 1 35 PRO 35 30 30 PRO PRO B . n B 1 36 ASN 36 31 31 ASN ASN B . n B 1 37 LEU 37 32 32 LEU LEU B . n B 1 38 HIS 38 33 33 HIS HIS B . n B 1 39 GLY 39 34 34 GLY GLY B . n B 1 40 ILE 40 35 35 ILE ILE B . n B 1 41 PHE 41 36 36 PHE PHE B . n B 1 42 GLY 42 37 37 GLY GLY B . n B 1 43 ARG 43 38 38 ARG ARG B . n B 1 44 HIS 44 39 39 HIS HIS B . n B 1 45 SER 45 40 40 SER SER B . n B 1 46 GLY 46 41 41 GLY GLY B . n B 1 47 GLN 47 42 42 GLN GLN B . n B 1 48 ALA 48 43 43 ALA ALA B . n B 1 49 GLU 49 44 44 GLU GLU B . n B 1 50 GLY 50 45 45 GLY GLY B . n B 1 51 TYR 51 46 46 TYR TYR B . n B 1 52 SER 52 47 47 SER SER B . n B 1 53 TYR 53 48 48 TYR TYR B . n B 1 54 THR 54 49 49 THR THR B . n B 1 55 ASP 55 50 50 ASP ASP B . n B 1 56 ALA 56 51 51 ALA ALA B . n B 1 57 ASN 57 52 52 ASN ASN B . n B 1 58 ILE 58 53 53 ILE ILE B . n B 1 59 LYS 59 54 54 LYS LYS B . n B 1 60 LYS 60 55 55 LYS LYS B . n B 1 61 ASN 61 56 56 ASN ASN B . n B 1 62 VAL 62 57 57 VAL VAL B . n B 1 63 LEU 63 58 58 LEU LEU B . n B 1 64 TRP 64 59 59 TRP TRP B . n B 1 65 ASP 65 60 60 ASP ASP B . n B 1 66 GLU 66 61 61 GLU GLU B . n B 1 67 ASN 67 62 62 ASN ASN B . n B 1 68 ASN 68 63 63 ASN ASN B . n B 1 69 MET 69 64 64 MET MET B . n B 1 70 SER 70 65 65 SER SER B . n B 1 71 GLU 71 66 66 GLU GLU B . n B 1 72 TYR 72 67 67 TYR TYR B . n B 1 73 LEU 73 68 68 LEU LEU B . n B 1 74 THR 74 69 69 THR THR B . n B 1 75 ASN 75 70 70 ASN ASN B . n B 1 76 PRO 76 71 71 PRO PRO B . n B 1 77 LYS 77 72 72 LYS LYS B . n B 1 78 LYS 78 73 73 LYS LYS B . n B 1 79 TYR 79 74 74 TYR TYR B . n B 1 80 ILE 80 75 75 ILE ILE B . n B 1 81 PRO 81 76 76 PRO PRO B . n B 1 82 GLY 82 77 77 GLY GLY B . n B 1 83 THR 83 78 78 THR THR B . n B 1 84 LYS 84 79 79 LYS LYS B . n B 1 85 MET 85 80 80 MET MET B . n B 1 86 ALA 86 81 81 ALA ALA B . n B 1 87 PHE 87 82 82 PHE PHE B . n B 1 88 GLY 88 83 83 GLY GLY B . n B 1 89 GLY 89 84 84 GLY GLY B . n B 1 90 LEU 90 85 85 LEU LEU B . n B 1 91 LYS 91 86 86 LYS LYS B . n B 1 92 LYS 92 87 87 LYS LYS B . n B 1 93 GLU 93 88 88 GLU GLU B . n B 1 94 LYS 94 89 89 LYS LYS B . n B 1 95 ASP 95 90 90 ASP ASP B . n B 1 96 ARG 96 91 91 ARG ARG B . n B 1 97 ASN 97 92 92 ASN ASN B . n B 1 98 ASP 98 93 93 ASP ASP B . n B 1 99 LEU 99 94 94 LEU LEU B . n B 1 100 ILE 100 95 95 ILE ILE B . n B 1 101 THR 101 96 96 THR THR B . n B 1 102 TYR 102 97 97 TYR TYR B . n B 1 103 LEU 103 98 98 LEU LEU B . n B 1 104 LYS 104 99 99 LYS LYS B . n B 1 105 LYS 105 100 100 LYS LYS B . n B 1 106 ALA 106 101 101 ALA ALA B . n B 1 107 THR 107 102 102 THR THR B . n B 1 108 GLU 108 103 103 GLU GLU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEC 1 201 201 HEC HEM A . D 3 7AZ 1 202 202 7AZ PC6 A . E 4 SO4 1 203 1 SO4 SO4 A . F 4 SO4 1 204 2 SO4 SO4 A . G 2 HEC 1 201 201 HEC HEM B . H 3 7AZ 1 202 202 7AZ PC6 B . I 4 SO4 1 203 3 SO4 SO4 B . J 4 SO4 1 204 4 SO4 SO4 B . K 4 SO4 1 205 5 SO4 SO4 B . L 5 HOH 1 301 179 HOH HOH A . L 5 HOH 2 302 34 HOH HOH A . L 5 HOH 3 303 171 HOH HOH A . L 5 HOH 4 304 76 HOH HOH A . L 5 HOH 5 305 144 HOH HOH A . L 5 HOH 6 306 15 HOH HOH A . L 5 HOH 7 307 162 HOH HOH A . L 5 HOH 8 308 142 HOH HOH A . L 5 HOH 9 309 89 HOH HOH A . L 5 HOH 10 310 35 HOH HOH A . L 5 HOH 11 311 86 HOH HOH A . L 5 HOH 12 312 63 HOH HOH A . L 5 HOH 13 313 115 HOH HOH A . L 5 HOH 14 314 157 HOH HOH A . L 5 HOH 15 315 141 HOH HOH A . L 5 HOH 16 316 49 HOH HOH A . L 5 HOH 17 317 124 HOH HOH A . L 5 HOH 18 318 114 HOH HOH A . L 5 HOH 19 319 33 HOH HOH A . L 5 HOH 20 320 147 HOH HOH A . L 5 HOH 21 321 29 HOH HOH A . L 5 HOH 22 322 41 HOH HOH A . L 5 HOH 23 323 104 HOH HOH A . L 5 HOH 24 324 8 HOH HOH A . L 5 HOH 25 325 93 HOH HOH A . L 5 HOH 26 326 64 HOH HOH A . L 5 HOH 27 327 32 HOH HOH A . L 5 HOH 28 328 166 HOH HOH A . L 5 HOH 29 329 164 HOH HOH A . L 5 HOH 30 330 119 HOH HOH A . L 5 HOH 31 331 150 HOH HOH A . L 5 HOH 32 332 14 HOH HOH A . L 5 HOH 33 333 40 HOH HOH A . L 5 HOH 34 334 125 HOH HOH A . L 5 HOH 35 335 7 HOH HOH A . L 5 HOH 36 336 101 HOH HOH A . L 5 HOH 37 337 98 HOH HOH A . L 5 HOH 38 338 43 HOH HOH A . L 5 HOH 39 339 158 HOH HOH A . L 5 HOH 40 340 145 HOH HOH A . L 5 HOH 41 341 13 HOH HOH A . L 5 HOH 42 342 106 HOH HOH A . L 5 HOH 43 343 95 HOH HOH A . L 5 HOH 44 344 67 HOH HOH A . L 5 HOH 45 345 54 HOH HOH A . L 5 HOH 46 346 66 HOH HOH A . L 5 HOH 47 347 74 HOH HOH A . L 5 HOH 48 348 96 HOH HOH A . L 5 HOH 49 349 18 HOH HOH A . L 5 HOH 50 350 85 HOH HOH A . L 5 HOH 51 351 2 HOH HOH A . L 5 HOH 52 352 102 HOH HOH A . L 5 HOH 53 353 52 HOH HOH A . L 5 HOH 54 354 105 HOH HOH A . L 5 HOH 55 355 30 HOH HOH A . L 5 HOH 56 356 160 HOH HOH A . L 5 HOH 57 357 58 HOH HOH A . L 5 HOH 58 358 103 HOH HOH A . L 5 HOH 59 359 120 HOH HOH A . L 5 HOH 60 360 19 HOH HOH A . L 5 HOH 61 361 70 HOH HOH A . L 5 HOH 62 362 25 HOH HOH A . L 5 HOH 63 363 159 HOH HOH A . L 5 HOH 64 364 127 HOH HOH A . L 5 HOH 65 365 77 HOH HOH A . L 5 HOH 66 366 50 HOH HOH A . L 5 HOH 67 367 10 HOH HOH A . L 5 HOH 68 368 82 HOH HOH A . L 5 HOH 69 369 39 HOH HOH A . L 5 HOH 70 370 28 HOH HOH A . L 5 HOH 71 371 60 HOH HOH A . L 5 HOH 72 372 57 HOH HOH A . L 5 HOH 73 373 146 HOH HOH A . L 5 HOH 74 374 55 HOH HOH A . L 5 HOH 75 375 99 HOH HOH A . L 5 HOH 76 376 75 HOH HOH A . L 5 HOH 77 377 90 HOH HOH A . L 5 HOH 78 378 48 HOH HOH A . L 5 HOH 79 379 176 HOH HOH A . L 5 HOH 80 380 151 HOH HOH A . L 5 HOH 81 381 116 HOH HOH A . L 5 HOH 82 382 175 HOH HOH A . L 5 HOH 83 383 136 HOH HOH A . L 5 HOH 84 384 133 HOH HOH A . L 5 HOH 85 385 122 HOH HOH A . L 5 HOH 86 386 173 HOH HOH A . L 5 HOH 87 387 68 HOH HOH A . L 5 HOH 88 388 16 HOH HOH A . L 5 HOH 89 389 112 HOH HOH A . L 5 HOH 90 390 180 HOH HOH A . L 5 HOH 91 391 153 HOH HOH A . L 5 HOH 92 392 152 HOH HOH A . L 5 HOH 93 393 135 HOH HOH A . M 5 HOH 1 301 21 HOH HOH B . M 5 HOH 2 302 36 HOH HOH B . M 5 HOH 3 303 148 HOH HOH B . M 5 HOH 4 304 140 HOH HOH B . M 5 HOH 5 305 161 HOH HOH B . M 5 HOH 6 306 126 HOH HOH B . M 5 HOH 7 307 80 HOH HOH B . M 5 HOH 8 308 121 HOH HOH B . M 5 HOH 9 309 31 HOH HOH B . M 5 HOH 10 310 149 HOH HOH B . M 5 HOH 11 311 110 HOH HOH B . M 5 HOH 12 312 94 HOH HOH B . M 5 HOH 13 313 5 HOH HOH B . M 5 HOH 14 314 79 HOH HOH B . M 5 HOH 15 315 138 HOH HOH B . M 5 HOH 16 316 46 HOH HOH B . M 5 HOH 17 317 118 HOH HOH B . M 5 HOH 18 318 165 HOH HOH B . M 5 HOH 19 319 108 HOH HOH B . M 5 HOH 20 320 56 HOH HOH B . M 5 HOH 21 321 47 HOH HOH B . M 5 HOH 22 322 62 HOH HOH B . M 5 HOH 23 323 71 HOH HOH B . M 5 HOH 24 324 88 HOH HOH B . M 5 HOH 25 325 27 HOH HOH B . M 5 HOH 26 326 168 HOH HOH B . M 5 HOH 27 327 143 HOH HOH B . M 5 HOH 28 328 12 HOH HOH B . M 5 HOH 29 329 113 HOH HOH B . M 5 HOH 30 330 20 HOH HOH B . M 5 HOH 31 331 109 HOH HOH B . M 5 HOH 32 332 61 HOH HOH B . M 5 HOH 33 333 163 HOH HOH B . M 5 HOH 34 334 170 HOH HOH B . M 5 HOH 35 335 6 HOH HOH B . M 5 HOH 36 336 17 HOH HOH B . M 5 HOH 37 337 24 HOH HOH B . M 5 HOH 38 338 3 HOH HOH B . M 5 HOH 39 339 1 HOH HOH B . M 5 HOH 40 340 9 HOH HOH B . M 5 HOH 41 341 42 HOH HOH B . M 5 HOH 42 342 83 HOH HOH B . M 5 HOH 43 343 45 HOH HOH B . M 5 HOH 44 344 78 HOH HOH B . M 5 HOH 45 345 107 HOH HOH B . M 5 HOH 46 346 81 HOH HOH B . M 5 HOH 47 347 128 HOH HOH B . M 5 HOH 48 348 100 HOH HOH B . M 5 HOH 49 349 22 HOH HOH B . M 5 HOH 50 350 97 HOH HOH B . M 5 HOH 51 351 156 HOH HOH B . M 5 HOH 52 352 111 HOH HOH B . M 5 HOH 53 353 117 HOH HOH B . M 5 HOH 54 354 44 HOH HOH B . M 5 HOH 55 355 4 HOH HOH B . M 5 HOH 56 356 11 HOH HOH B . M 5 HOH 57 357 51 HOH HOH B . M 5 HOH 58 358 174 HOH HOH B . M 5 HOH 59 359 53 HOH HOH B . M 5 HOH 60 360 123 HOH HOH B . M 5 HOH 61 361 23 HOH HOH B . M 5 HOH 62 362 178 HOH HOH B . M 5 HOH 63 363 65 HOH HOH B . M 5 HOH 64 364 84 HOH HOH B . M 5 HOH 65 365 129 HOH HOH B . M 5 HOH 66 366 72 HOH HOH B . M 5 HOH 67 367 38 HOH HOH B . M 5 HOH 68 368 92 HOH HOH B . M 5 HOH 69 369 26 HOH HOH B . M 5 HOH 70 370 73 HOH HOH B . M 5 HOH 71 371 59 HOH HOH B . M 5 HOH 72 372 37 HOH HOH B . M 5 HOH 73 373 134 HOH HOH B . M 5 HOH 74 374 91 HOH HOH B . M 5 HOH 75 375 131 HOH HOH B . M 5 HOH 76 376 155 HOH HOH B . M 5 HOH 77 377 130 HOH HOH B . M 5 HOH 78 378 172 HOH HOH B . M 5 HOH 79 379 137 HOH HOH B . M 5 HOH 80 380 132 HOH HOH B . M 5 HOH 81 381 177 HOH HOH B . M 5 HOH 82 382 169 HOH HOH B . M 5 HOH 83 383 87 HOH HOH B . M 5 HOH 84 384 154 HOH HOH B . M 5 HOH 85 385 69 HOH HOH B . M 5 HOH 86 386 139 HOH HOH B . M 5 HOH 87 387 167 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4010 ? 1 MORE -104 ? 1 'SSA (A^2)' 11840 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 23 ? A HIS 18 ? 1_555 FE ? C HEC . ? A HEC 201 ? 1_555 NA ? C HEC . ? A HEC 201 ? 1_555 89.6 ? 2 NE2 ? A HIS 23 ? A HIS 18 ? 1_555 FE ? C HEC . ? A HEC 201 ? 1_555 NB ? C HEC . ? A HEC 201 ? 1_555 89.4 ? 3 NA ? C HEC . ? A HEC 201 ? 1_555 FE ? C HEC . ? A HEC 201 ? 1_555 NB ? C HEC . ? A HEC 201 ? 1_555 90.5 ? 4 NE2 ? A HIS 23 ? A HIS 18 ? 1_555 FE ? C HEC . ? A HEC 201 ? 1_555 NC ? C HEC . ? A HEC 201 ? 1_555 90.1 ? 5 NA ? C HEC . ? A HEC 201 ? 1_555 FE ? C HEC . ? A HEC 201 ? 1_555 NC ? C HEC . ? A HEC 201 ? 1_555 179.1 ? 6 NB ? C HEC . ? A HEC 201 ? 1_555 FE ? C HEC . ? A HEC 201 ? 1_555 NC ? C HEC . ? A HEC 201 ? 1_555 88.7 ? 7 NE2 ? A HIS 23 ? A HIS 18 ? 1_555 FE ? C HEC . ? A HEC 201 ? 1_555 ND ? C HEC . ? A HEC 201 ? 1_555 90.4 ? 8 NA ? C HEC . ? A HEC 201 ? 1_555 FE ? C HEC . ? A HEC 201 ? 1_555 ND ? C HEC . ? A HEC 201 ? 1_555 90.3 ? 9 NB ? C HEC . ? A HEC 201 ? 1_555 FE ? C HEC . ? A HEC 201 ? 1_555 ND ? C HEC . ? A HEC 201 ? 1_555 179.1 ? 10 NC ? C HEC . ? A HEC 201 ? 1_555 FE ? C HEC . ? A HEC 201 ? 1_555 ND ? C HEC . ? A HEC 201 ? 1_555 90.5 ? 11 NE2 ? A HIS 23 ? A HIS 18 ? 1_555 FE ? C HEC . ? A HEC 201 ? 1_555 SD ? A MET 85 ? A MET 80 ? 1_555 174.3 ? 12 NA ? C HEC . ? A HEC 201 ? 1_555 FE ? C HEC . ? A HEC 201 ? 1_555 SD ? A MET 85 ? A MET 80 ? 1_555 85.3 ? 13 NB ? C HEC . ? A HEC 201 ? 1_555 FE ? C HEC . ? A HEC 201 ? 1_555 SD ? A MET 85 ? A MET 80 ? 1_555 93.1 ? 14 NC ? C HEC . ? A HEC 201 ? 1_555 FE ? C HEC . ? A HEC 201 ? 1_555 SD ? A MET 85 ? A MET 80 ? 1_555 95.0 ? 15 ND ? C HEC . ? A HEC 201 ? 1_555 FE ? C HEC . ? A HEC 201 ? 1_555 SD ? A MET 85 ? A MET 80 ? 1_555 87.2 ? 16 NE2 ? B HIS 23 ? B HIS 18 ? 1_555 FE ? G HEC . ? B HEC 201 ? 1_555 NA ? G HEC . ? B HEC 201 ? 1_555 88.9 ? 17 NE2 ? B HIS 23 ? B HIS 18 ? 1_555 FE ? G HEC . ? B HEC 201 ? 1_555 NB ? G HEC . ? B HEC 201 ? 1_555 88.2 ? 18 NA ? G HEC . ? B HEC 201 ? 1_555 FE ? G HEC . ? B HEC 201 ? 1_555 NB ? G HEC . ? B HEC 201 ? 1_555 89.7 ? 19 NE2 ? B HIS 23 ? B HIS 18 ? 1_555 FE ? G HEC . ? B HEC 201 ? 1_555 NC ? G HEC . ? B HEC 201 ? 1_555 90.3 ? 20 NA ? G HEC . ? B HEC 201 ? 1_555 FE ? G HEC . ? B HEC 201 ? 1_555 NC ? G HEC . ? B HEC 201 ? 1_555 178.8 ? 21 NB ? G HEC . ? B HEC 201 ? 1_555 FE ? G HEC . ? B HEC 201 ? 1_555 NC ? G HEC . ? B HEC 201 ? 1_555 89.4 ? 22 NE2 ? B HIS 23 ? B HIS 18 ? 1_555 FE ? G HEC . ? B HEC 201 ? 1_555 ND ? G HEC . ? B HEC 201 ? 1_555 91.1 ? 23 NA ? G HEC . ? B HEC 201 ? 1_555 FE ? G HEC . ? B HEC 201 ? 1_555 ND ? G HEC . ? B HEC 201 ? 1_555 90.0 ? 24 NB ? G HEC . ? B HEC 201 ? 1_555 FE ? G HEC . ? B HEC 201 ? 1_555 ND ? G HEC . ? B HEC 201 ? 1_555 179.3 ? 25 NC ? G HEC . ? B HEC 201 ? 1_555 FE ? G HEC . ? B HEC 201 ? 1_555 ND ? G HEC . ? B HEC 201 ? 1_555 90.9 ? 26 NE2 ? B HIS 23 ? B HIS 18 ? 1_555 FE ? G HEC . ? B HEC 201 ? 1_555 SD ? B MET 85 ? B MET 80 ? 1_555 174.2 ? 27 NA ? G HEC . ? B HEC 201 ? 1_555 FE ? G HEC . ? B HEC 201 ? 1_555 SD ? B MET 85 ? B MET 80 ? 1_555 85.6 ? 28 NB ? G HEC . ? B HEC 201 ? 1_555 FE ? G HEC . ? B HEC 201 ? 1_555 SD ? B MET 85 ? B MET 80 ? 1_555 93.7 ? 29 NC ? G HEC . ? B HEC 201 ? 1_555 FE ? G HEC . ? B HEC 201 ? 1_555 SD ? B MET 85 ? B MET 80 ? 1_555 95.3 ? 30 ND ? G HEC . ? B HEC 201 ? 1_555 FE ? G HEC . ? B HEC 201 ? 1_555 SD ? B MET 85 ? B MET 80 ? 1_555 87.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-05-10 2 'Structure model' 2 0 2019-09-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Non-polymer description' 5 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' atom_site_anisotrop 3 2 'Structure model' chem_comp 4 2 'Structure model' entity 5 2 'Structure model' pdbx_entity_nonpoly 6 2 'Structure model' pdbx_nonpoly_scheme 7 2 'Structure model' pdbx_struct_conn_angle 8 2 'Structure model' struct_conn 9 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site.auth_atom_id' 6 2 'Structure model' '_atom_site.auth_comp_id' 7 2 'Structure model' '_atom_site.label_atom_id' 8 2 'Structure model' '_atom_site.label_comp_id' 9 2 'Structure model' '_atom_site.type_symbol' 10 2 'Structure model' '_atom_site_anisotrop.U[1][1]' 11 2 'Structure model' '_atom_site_anisotrop.U[1][2]' 12 2 'Structure model' '_atom_site_anisotrop.U[1][3]' 13 2 'Structure model' '_atom_site_anisotrop.U[2][2]' 14 2 'Structure model' '_atom_site_anisotrop.U[2][3]' 15 2 'Structure model' '_atom_site_anisotrop.U[3][3]' 16 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 17 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 18 2 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 19 2 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 20 2 'Structure model' '_atom_site_anisotrop.type_symbol' 21 2 'Structure model' '_chem_comp.formula' 22 2 'Structure model' '_chem_comp.formula_weight' 23 2 'Structure model' '_chem_comp.id' 24 2 'Structure model' '_chem_comp.name' 25 2 'Structure model' '_chem_comp.pdbx_synonyms' 26 2 'Structure model' '_entity.formula_weight' 27 2 'Structure model' '_entity.pdbx_description' 28 2 'Structure model' '_pdbx_entity_nonpoly.comp_id' 29 2 'Structure model' '_pdbx_entity_nonpoly.name' 30 2 'Structure model' '_pdbx_nonpoly_scheme.mon_id' 31 2 'Structure model' '_pdbx_nonpoly_scheme.pdb_mon_id' 32 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 33 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 34 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 35 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 36 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 37 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 38 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 39 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 40 2 'Structure model' '_struct_site.details' 41 2 'Structure model' '_struct_site.pdbx_auth_comp_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 0.9170 -23.7650 -14.3480 0.0683 0.0286 0.0175 -0.0310 0.0162 -0.0023 2.2110 2.3555 1.8377 0.0733 -0.0833 -0.1478 0.0070 -0.0143 0.0072 -0.0329 -0.1620 -0.1049 -0.2661 0.1706 -0.1019 'X-RAY DIFFRACTION' 2 ? refined 2.3640 -29.6060 -39.9690 0.0474 0.0287 0.0093 0.0263 -0.0017 0.0042 2.9668 2.0559 1.7533 0.2771 -0.2992 -0.1632 0.0715 -0.0904 0.0189 0.0507 0.1456 -0.0437 0.0830 -0.2119 -0.0752 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A -4 A 202 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B -5 B 202 ? ? ? ? ? ? # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0155 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.20 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 103 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 301 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.15 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 27 ? ? -128.55 -132.19 2 1 ASN A 70 ? ? -166.46 91.80 3 1 LYS B 27 ? ? -129.79 -131.51 4 1 ASN B 70 ? ? -168.65 87.70 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id ALA _pdbx_unobs_or_zero_occ_residues.auth_seq_id -5 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id ALA _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'HEME C' HEC 3 'phosphonato-calix[6]arene' 7AZ 4 'SULFATE ION' SO4 5 water HOH #