HEADER MEMBRANE PROTEIN 08-FEB-17 5N2R TITLE CRYSTAL STRUCTURE OF STABILIZED A2A ADENOSINE RECEPTOR A2AR-STAR2-BRIL TITLE 2 IN COMPLEX WITH PSB36 AT 2.8A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENOSINE RECEPTOR A2A,SOLUBLE CYTOCHROME B562,ADENOSINE COMPND 3 RECEPTOR A2A SOLUBLE CYTOCHROME B562 ADENOSINE RECEPTOR A2A,ADENOSINE COMPND 4 RECEPTOR A2A; COMPND 5 CHAIN: A; COMPND 6 SYNONYM: CYTOCHROME B-562; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, ESCHERICHIA COLI; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606, 562; SOURCE 5 GENE: ADORA2A, ADORA2, CYBC, ADORA2A; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: TNI PRO; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PFAST-BAC KEYWDS G-PROTEIN-COUPLED RECEPTOR, INTEGRAL THERMOSTABILIZING MUTATIONS, KEYWDS 2 MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.K.Y.CHENG,E.SEGALA,N.ROBERTSON,F.DEFLORIAN,A.S.DORE,J.C.ERREY, AUTHOR 2 C.FIEZ-VANDAL,F.H.MARSHALL,R.M.COOKE REVDAT 2 09-AUG-17 5N2R 1 JRNL REVDAT 1 26-JUL-17 5N2R 0 JRNL AUTH R.K.Y.CHENG,E.SEGALA,N.ROBERTSON,F.DEFLORIAN,A.S.DORE, JRNL AUTH 2 J.C.ERREY,C.FIEZ-VANDAL,F.H.MARSHALL,R.M.COOKE JRNL TITL STRUCTURES OF HUMAN A1 AND A2A ADENOSINE RECEPTORS WITH JRNL TITL 2 XANTHINES REVEAL DETERMINANTS OF SELECTIVITY. JRNL REF STRUCTURE V. 25 1275 2017 JRNL REFN ISSN 1878-4186 JRNL PMID 28712806 JRNL DOI 10.1016/J.STR.2017.06.012 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 12814 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.140 REMARK 3 FREE R VALUE TEST SET COUNT : 658 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.3633 - 4.7855 1.00 2542 153 0.1869 0.2348 REMARK 3 2 4.7855 - 3.7995 1.00 2435 137 0.1525 0.1867 REMARK 3 3 3.7995 - 3.3195 1.00 2402 131 0.1958 0.2189 REMARK 3 4 3.3195 - 3.0161 1.00 2394 112 0.2319 0.3199 REMARK 3 5 3.0161 - 2.8000 1.00 2383 125 0.2423 0.2721 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.680 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3542 REMARK 3 ANGLE : 0.501 4716 REMARK 3 CHIRALITY : 0.045 529 REMARK 3 PLANARITY : 0.004 561 REMARK 3 DIHEDRAL : 17.289 1170 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -1 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.8727 184.3023 20.9676 REMARK 3 T TENSOR REMARK 3 T11: 0.1334 T22: 0.2010 REMARK 3 T33: 0.1389 T12: -0.0238 REMARK 3 T13: -0.0027 T23: -0.0126 REMARK 3 L TENSOR REMARK 3 L11: 0.2086 L22: 0.1448 REMARK 3 L33: 1.0324 L12: 0.0351 REMARK 3 L13: -0.1185 L23: -0.2939 REMARK 3 S TENSOR REMARK 3 S11: -0.0451 S12: 0.0118 S13: -0.0246 REMARK 3 S21: -0.0718 S22: 0.0211 S23: 0.0423 REMARK 3 S31: 0.0120 S32: 0.1588 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 187 THROUGH 1018 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.8606 213.8854 19.8192 REMARK 3 T TENSOR REMARK 3 T11: -0.0396 T22: -0.9905 REMARK 3 T33: 0.8868 T12: 0.4054 REMARK 3 T13: -0.2298 T23: 0.0861 REMARK 3 L TENSOR REMARK 3 L11: -0.0984 L22: 0.0155 REMARK 3 L33: -0.1221 L12: -0.0104 REMARK 3 L13: 0.1450 L23: 0.0154 REMARK 3 S TENSOR REMARK 3 S11: -0.2153 S12: -0.2522 S13: 0.5607 REMARK 3 S21: -0.1334 S22: 0.0030 S23: 0.2379 REMARK 3 S31: 0.1471 S32: 0.3389 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1019 THROUGH 1101 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6091 238.2556 22.1585 REMARK 3 T TENSOR REMARK 3 T11: 0.7388 T22: 0.3068 REMARK 3 T33: 1.6020 T12: 0.2060 REMARK 3 T13: 0.3492 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 0.0132 L22: 0.0327 REMARK 3 L33: -0.0076 L12: -0.0066 REMARK 3 L13: 0.0101 L23: 0.0436 REMARK 3 S TENSOR REMARK 3 S11: -0.0058 S12: -0.5078 S13: -0.0638 REMARK 3 S21: -0.3029 S22: 0.3941 S23: 0.1232 REMARK 3 S31: -0.0698 S32: -0.1022 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1102 THROUGH 305 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.8408 193.8876 11.4668 REMARK 3 T TENSOR REMARK 3 T11: 0.3127 T22: 0.2846 REMARK 3 T33: 0.2304 T12: -0.0379 REMARK 3 T13: -0.0535 T23: 0.0612 REMARK 3 L TENSOR REMARK 3 L11: 0.0275 L22: 0.0949 REMARK 3 L33: 0.3921 L12: -0.1061 REMARK 3 L13: 0.0484 L23: 0.2018 REMARK 3 S TENSOR REMARK 3 S11: -0.1756 S12: 0.2487 S13: 0.0803 REMARK 3 S21: -0.3000 S22: 0.3540 S23: 0.3178 REMARK 3 S31: -0.0428 S32: -0.1487 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5N2R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1200003469. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96862 REMARK 200 MONOCHROMATOR : DOUBLE SI (111) CRYSTAL REMARK 200 OPTICS : (DOUBLE) KB MIRROR PAIR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS JANUARY, 2014 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.17 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12834 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 90.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.17300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 1.14300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: RECTANGULAR REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES PH 5.5, 0.2M K/NA TARTRATE, REMARK 280 27.5-40% PEG400, 0.5-1% (V/V) (+/-)-2-METHYL-2,4-PENTANEDIOL, REMARK 280 LIPIDIC CUBIC PHASE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.32050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.32050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 19.62700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 90.36950 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 19.62700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 90.36950 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 70.32050 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 19.62700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 90.36950 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 70.32050 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 19.62700 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 90.36950 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 70.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A -8 REMARK 465 TYR A -7 REMARK 465 LYS A -6 REMARK 465 ASP A -5 REMARK 465 ASP A -4 REMARK 465 ASP A -3 REMARK 465 ASP A -2 REMARK 465 PRO A 1045 REMARK 465 PRO A 1046 REMARK 465 LYS A 1047 REMARK 465 LEU A 1048 REMARK 465 GLU A 1049 REMARK 465 ASP A 1050 REMARK 465 LYS A 1051 REMARK 465 SER A 1052 REMARK 465 PRO A 1053 REMARK 465 ASP A 1054 REMARK 465 SER A 1055 REMARK 465 PRO A 1056 REMARK 465 GLU A 1057 REMARK 465 MET A 1058 REMARK 465 LYS A 1059 REMARK 465 HIS A 306 REMARK 465 VAL A 307 REMARK 465 LEU A 308 REMARK 465 ARG A 309 REMARK 465 GLN A 310 REMARK 465 GLN A 311 REMARK 465 GLU A 312 REMARK 465 PRO A 313 REMARK 465 PHE A 314 REMARK 465 LYS A 315 REMARK 465 ALA A 316 REMARK 465 ALA A 317 REMARK 465 ALA A 318 REMARK 465 HIS A 319 REMARK 465 HIS A 320 REMARK 465 HIS A 321 REMARK 465 HIS A 322 REMARK 465 HIS A 323 REMARK 465 HIS A 324 REMARK 465 HIS A 325 REMARK 465 HIS A 326 REMARK 465 HIS A 327 REMARK 465 HIS A 328 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O GLY A -1 NH2 ARG A 300 4575 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 58 -50.81 -124.72 REMARK 500 VAL A 186 -53.63 -121.81 REMARK 500 TYR A1101 -55.67 -131.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 OLA A 2406 REMARK 610 OLA A 2407 REMARK 610 OLA A 2408 REMARK 610 OLA A 2409 REMARK 610 OLA A 2410 REMARK 610 OLA A 2412 REMARK 610 OLA A 2413 REMARK 610 OLA A 2414 REMARK 610 OLA A 2415 REMARK 610 OLA A 2416 REMARK 610 OLA A 2417 REMARK 610 OLA A 2419 REMARK 610 OLA A 2420 REMARK 610 OLA A 2421 REMARK 610 OLA A 2422 REMARK 610 OLA A 2423 REMARK 610 OLA A 2424 REMARK 610 OLA A 2425 REMARK 610 OLC A 2426 REMARK 610 OLC A 2427 REMARK 610 OLC A 2428 REMARK 610 OLC A 2429 REMARK 610 OLC A 2430 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A2400 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 52 OD1 REMARK 620 2 SER A 91 OG 122.7 REMARK 620 3 HOH A2514 O 97.7 111.6 REMARK 620 4 HOH A2534 O 75.1 77.8 61.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 2400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8JN A 2401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CLR A 2402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CLR A 2403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CLR A 2404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 2405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 2406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 2407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 2408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 2409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 2410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 2411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 2412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 2415 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 2416 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 2417 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 2418 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 2419 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 2420 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 2421 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 2422 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 2424 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 2425 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 2426 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 2427 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 2428 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 2429 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 2430 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TAR A 2431 DBREF 5N2R A 2 208 UNP P29274 AA2AR_HUMAN 2 208 DBREF 5N2R A 1001 1105 UNP P0ABE7 C562_ECOLX 23 127 DBREF 5N2R A 219 233 PDB 5N2R 5N2R 219 233 DBREF 5N2R A 234 318 UNP P29274 AA2AR_HUMAN 234 318 SEQADV 5N2R ASP A -8 UNP P29274 EXPRESSION TAG SEQADV 5N2R TYR A -7 UNP P29274 EXPRESSION TAG SEQADV 5N2R LYS A -6 UNP P29274 EXPRESSION TAG SEQADV 5N2R ASP A -5 UNP P29274 EXPRESSION TAG SEQADV 5N2R ASP A -4 UNP P29274 EXPRESSION TAG SEQADV 5N2R ASP A -3 UNP P29274 EXPRESSION TAG SEQADV 5N2R ASP A -2 UNP P29274 EXPRESSION TAG SEQADV 5N2R GLY A -1 UNP P29274 EXPRESSION TAG SEQADV 5N2R ALA A 0 UNP P29274 EXPRESSION TAG SEQADV 5N2R PRO A 1 UNP P29274 EXPRESSION TAG SEQADV 5N2R LEU A 54 UNP P29274 ALA 54 ENGINEERED MUTATION SEQADV 5N2R ALA A 88 UNP P29274 THR 88 ENGINEERED MUTATION SEQADV 5N2R ALA A 107 UNP P29274 ARG 107 ENGINEERED MUTATION SEQADV 5N2R ALA A 122 UNP P29274 LYS 122 ENGINEERED MUTATION SEQADV 5N2R ALA A 154 UNP P29274 ASN 154 ENGINEERED MUTATION SEQADV 5N2R ALA A 202 UNP P29274 LEU 202 ENGINEERED MUTATION SEQADV 5N2R TRP A 1007 UNP P0ABE7 MET 29 ENGINEERED MUTATION SEQADV 5N2R ILE A 1102 UNP P0ABE7 HIS 124 CONFLICT SEQADV 5N2R LEU A 1106 UNP P0ABE7 LINKER SEQADV 5N2R ALA A 235 UNP P29274 LEU 235 ENGINEERED MUTATION SEQADV 5N2R ALA A 239 UNP P29274 VAL 239 ENGINEERED MUTATION SEQADV 5N2R ALA A 277 UNP P29274 SER 277 ENGINEERED MUTATION SEQADV 5N2R ALA A 318 UNP P29274 GLY 318 ENGINEERED MUTATION SEQADV 5N2R HIS A 319 UNP P29274 EXPRESSION TAG SEQADV 5N2R HIS A 320 UNP P29274 EXPRESSION TAG SEQADV 5N2R HIS A 321 UNP P29274 EXPRESSION TAG SEQADV 5N2R HIS A 322 UNP P29274 EXPRESSION TAG SEQADV 5N2R HIS A 323 UNP P29274 EXPRESSION TAG SEQADV 5N2R HIS A 324 UNP P29274 EXPRESSION TAG SEQADV 5N2R HIS A 325 UNP P29274 EXPRESSION TAG SEQADV 5N2R HIS A 326 UNP P29274 EXPRESSION TAG SEQADV 5N2R HIS A 327 UNP P29274 EXPRESSION TAG SEQADV 5N2R HIS A 328 UNP P29274 EXPRESSION TAG SEQRES 1 A 433 ASP TYR LYS ASP ASP ASP ASP GLY ALA PRO PRO ILE MET SEQRES 2 A 433 GLY SER SER VAL TYR ILE THR VAL GLU LEU ALA ILE ALA SEQRES 3 A 433 VAL LEU ALA ILE LEU GLY ASN VAL LEU VAL CYS TRP ALA SEQRES 4 A 433 VAL TRP LEU ASN SER ASN LEU GLN ASN VAL THR ASN TYR SEQRES 5 A 433 PHE VAL VAL SER LEU ALA ALA ALA ASP ILE LEU VAL GLY SEQRES 6 A 433 VAL LEU ALA ILE PRO PHE ALA ILE THR ILE SER THR GLY SEQRES 7 A 433 PHE CYS ALA ALA CYS HIS GLY CYS LEU PHE ILE ALA CYS SEQRES 8 A 433 PHE VAL LEU VAL LEU ALA GLN SER SER ILE PHE SER LEU SEQRES 9 A 433 LEU ALA ILE ALA ILE ASP ARG TYR ILE ALA ILE ALA ILE SEQRES 10 A 433 PRO LEU ARG TYR ASN GLY LEU VAL THR GLY THR ARG ALA SEQRES 11 A 433 ALA GLY ILE ILE ALA ILE CYS TRP VAL LEU SER PHE ALA SEQRES 12 A 433 ILE GLY LEU THR PRO MET LEU GLY TRP ASN ASN CYS GLY SEQRES 13 A 433 GLN PRO LYS GLU GLY LYS ALA HIS SER GLN GLY CYS GLY SEQRES 14 A 433 GLU GLY GLN VAL ALA CYS LEU PHE GLU ASP VAL VAL PRO SEQRES 15 A 433 MET ASN TYR MET VAL TYR PHE ASN PHE PHE ALA CYS VAL SEQRES 16 A 433 LEU VAL PRO LEU LEU LEU MET LEU GLY VAL TYR LEU ARG SEQRES 17 A 433 ILE PHE ALA ALA ALA ARG ARG GLN LEU ALA ASP LEU GLU SEQRES 18 A 433 ASP ASN TRP GLU THR LEU ASN ASP ASN LEU LYS VAL ILE SEQRES 19 A 433 GLU LYS ALA ASP ASN ALA ALA GLN VAL LYS ASP ALA LEU SEQRES 20 A 433 THR LYS MET ARG ALA ALA ALA LEU ASP ALA GLN LYS ALA SEQRES 21 A 433 THR PRO PRO LYS LEU GLU ASP LYS SER PRO ASP SER PRO SEQRES 22 A 433 GLU MET LYS ASP PHE ARG HIS GLY PHE ASP ILE LEU VAL SEQRES 23 A 433 GLY GLN ILE ASP ASP ALA LEU LYS LEU ALA ASN GLU GLY SEQRES 24 A 433 LYS VAL LYS GLU ALA GLN ALA ALA ALA GLU GLN LEU LYS SEQRES 25 A 433 THR THR ARG ASN ALA TYR ILE GLN LYS TYR LEU GLU ARG SEQRES 26 A 433 ALA ARG SER THR LEU GLN LYS GLU VAL HIS ALA ALA LYS SEQRES 27 A 433 SER ALA ALA ILE ILE ALA GLY LEU PHE ALA LEU CYS TRP SEQRES 28 A 433 LEU PRO LEU HIS ILE ILE ASN CYS PHE THR PHE PHE CYS SEQRES 29 A 433 PRO ASP CYS SER HIS ALA PRO LEU TRP LEU MET TYR LEU SEQRES 30 A 433 ALA ILE VAL LEU ALA HIS THR ASN SER VAL VAL ASN PRO SEQRES 31 A 433 PHE ILE TYR ALA TYR ARG ILE ARG GLU PHE ARG GLN THR SEQRES 32 A 433 PHE ARG LYS ILE ILE ARG SER HIS VAL LEU ARG GLN GLN SEQRES 33 A 433 GLU PRO PHE LYS ALA ALA ALA HIS HIS HIS HIS HIS HIS SEQRES 34 A 433 HIS HIS HIS HIS HET NA A2400 1 HET 8JN A2401 28 HET CLR A2402 28 HET CLR A2403 28 HET CLR A2404 28 HET OLA A2405 20 HET OLA A2406 15 HET OLA A2407 14 HET OLA A2408 11 HET OLA A2409 7 HET OLA A2410 17 HET OLA A2411 20 HET OLA A2412 7 HET OLA A2413 8 HET OLA A2414 9 HET OLA A2415 14 HET OLA A2416 17 HET OLA A2417 14 HET OLA A2418 20 HET OLA A2419 17 HET OLA A2420 11 HET OLA A2421 9 HET OLA A2422 14 HET OLA A2423 10 HET OLA A2424 16 HET OLA A2425 10 HET OLC A2426 16 HET OLC A2427 20 HET OLC A2428 20 HET OLC A2429 21 HET OLC A2430 18 HET TAR A2431 10 HETNAM NA SODIUM ION HETNAM 8JN 1-BUTYL-3-[(~{E})-3-OXIDANYLPROP-1-ENYL]-8-[(1~{R}, HETNAM 2 8JN 5~{S})-3-TRICYCLO[3.3.1.0^{3,7}]NONANYL]-7~{H}-PURINE- HETNAM 3 8JN 2,6-DIONE HETNAM CLR CHOLESTEROL HETNAM OLA OLEIC ACID HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETNAM TAR D(-)-TARTARIC ACID HETSYN OLC 1-OLEOYL-R-GLYCEROL FORMUL 2 NA NA 1+ FORMUL 3 8JN C21 H28 N4 O3 FORMUL 4 CLR 3(C27 H46 O) FORMUL 7 OLA 21(C18 H34 O2) FORMUL 28 OLC 5(C21 H40 O4) FORMUL 33 TAR C4 H6 O6 FORMUL 34 HOH *37(H2 O) HELIX 1 AA1 PRO A 1 ASN A 34 1 34 HELIX 2 AA2 SER A 35 GLN A 38 5 4 HELIX 3 AA3 ASN A 39 LEU A 58 1 20 HELIX 4 AA4 LEU A 58 SER A 67 1 10 HELIX 5 AA5 CYS A 74 ILE A 108 1 35 HELIX 6 AA6 ARG A 111 VAL A 116 1 6 HELIX 7 AA7 THR A 117 LEU A 137 1 21 HELIX 8 AA8 THR A 138 GLY A 142 5 5 HELIX 9 AA9 LYS A 150 GLN A 157 1 8 HELIX 10 AB1 LEU A 167 VAL A 172 1 6 HELIX 11 AB2 PRO A 173 PHE A 180 1 8 HELIX 12 AB3 VAL A 186 LEU A 208 1 23 HELIX 13 AB4 ASP A 1002 LYS A 1019 1 18 HELIX 14 AB5 ASN A 1022 THR A 1044 1 23 HELIX 15 AB6 PHE A 1061 GLU A 1081 1 21 HELIX 16 AB7 LYS A 1083 GLN A 1093 1 11 HELIX 17 AB8 GLN A 1093 TYR A 1101 1 9 HELIX 18 AB9 TYR A 1101 LEU A 1106 1 6 HELIX 19 AC1 ARG A 220 CYS A 259 1 40 HELIX 20 AC2 PRO A 266 ILE A 292 1 27 HELIX 21 AC3 ILE A 292 SER A 305 1 14 SHEET 1 AA1 2 CYS A 71 ALA A 73 0 SHEET 2 AA1 2 GLN A 163 ALA A 165 -1 O VAL A 164 N ALA A 72 SSBOND 1 CYS A 71 CYS A 159 1555 1555 2.03 SSBOND 2 CYS A 74 CYS A 146 1555 1555 2.03 SSBOND 3 CYS A 77 CYS A 166 1555 1555 2.03 SSBOND 4 CYS A 259 CYS A 262 1555 1555 2.03 LINK OD1 ASP A 52 NA NA A2400 1555 1555 2.41 LINK OG SER A 91 NA NA A2400 1555 1555 2.44 LINK NA NA A2400 O HOH A2514 1555 1555 2.59 LINK NA NA A2400 O HOH A2534 1555 1555 2.52 SITE 1 AC1 5 ASP A 52 SER A 91 ASN A 280 HOH A2514 SITE 2 AC1 5 HOH A2534 SITE 1 AC2 15 PHE A 168 GLU A 169 MET A 174 MET A 177 SITE 2 AC2 15 TRP A 246 LEU A 249 ASN A 253 THR A 256 SITE 3 AC2 15 HIS A 264 MET A 270 ILE A 274 HIS A 278 SITE 4 AC2 15 HOH A2502 HOH A2504 HOH A2513 SITE 1 AC3 6 ALA A 72 ALA A 73 GLY A 76 ILE A 80 SITE 2 AC3 6 CLR A2404 OLC A2426 SITE 1 AC4 5 PRO A 248 CYS A 262 SER A 263 LEU A 269 SITE 2 AC4 5 OLA A2424 SITE 1 AC5 7 CYS A 254 PHE A 255 PHE A 258 CYS A 259 SITE 2 AC5 7 CLR A2402 OLA A2407 OLC A2428 SITE 1 AC6 2 THR A 65 OLC A2428 SITE 1 AC7 2 PRO A 266 LEU A 272 SITE 1 AC8 6 LEU A 194 PHE A 201 ALA A 236 CLR A2404 SITE 2 AC8 6 OLA A2416 OLA A2417 SITE 1 AC9 3 HIS A 75 GLY A 76 OLA A2419 SITE 1 AD1 2 LEU A 19 THR A 279 SITE 1 AD2 4 GLY A 5 SER A 6 LEU A 267 TYR A 271 SITE 1 AD3 4 LEU A 96 ILE A 127 OLA A2415 OLA A2418 SITE 1 AD4 3 LEU A 19 PHE A 286 HOH A2524 SITE 1 AD5 3 GLY A 123 OLA A2411 OLA A2418 SITE 1 AD6 5 TRP A 32 PHE A 201 LYS A 233 OLA A2407 SITE 2 AD6 5 OLC A2430 SITE 1 AD7 3 ALA A 236 GLY A 240 OLA A2407 SITE 1 AD8 12 HIS A 75 LEU A 131 ALA A 134 MET A 140 SITE 2 AD8 12 LEU A 141 TYR A 179 PHE A 183 OLA A2411 SITE 3 AD8 12 OLA A2415 OLA A2419 OLC A2427 HOH A2503 SITE 1 AD9 5 PHE A 133 MET A 140 OLA A2408 OLA A2418 SITE 2 AD9 5 OLA A2420 SITE 1 AE1 4 ALA A 122 OLA A2419 OLA A2422 OLC A2429 SITE 1 AE2 3 ALA A 97 ILE A 100 VAL A 116 SITE 1 AE3 3 ALA A 122 GLY A 123 OLA A2420 SITE 1 AE4 3 PHE A 255 SER A 263 CLR A2403 SITE 1 AE5 2 ILE A 287 TYR A 290 SITE 1 AE6 3 PHE A 258 CLR A2402 OLC A2427 SITE 1 AE7 4 TYR A 179 PHE A 257 OLA A2418 OLC A2426 SITE 1 AE8 9 LEU A 58 PHE A 62 THR A 65 PHE A 70 SITE 2 AE8 9 CYS A 71 GLN A 163 ASP A 261 CLR A2404 SITE 3 AE8 9 OLA A2405 SITE 1 AE9 6 GLY A 118 ILE A 125 TRP A 129 PHE A 133 SITE 2 AE9 6 OLA A2420 OLC A2430 SITE 1 AF1 8 CYS A 28 TRP A 32 TYR A 43 VAL A 46 SITE 2 AF1 8 ALA A 50 ARG A 205 OLA A2416 OLC A2429 SITE 1 AF2 6 GLY A 142 TRP A 143 ASN A 144 ASN A 145 SITE 2 AF2 6 PRO A 173 ASN A 175 CRYST1 39.254 180.739 140.641 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025475 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005533 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007110 0.00000