data_5N7L # _entry.id 5N7L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5N7L pdb_00005n7l 10.2210/pdb5n7l/pdb WWPDB D_1200003616 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-03-14 2 'Structure model' 1 1 2018-11-21 3 'Structure model' 1 2 2018-11-28 4 'Structure model' 1 3 2024-01-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' pdbx_database_proc 5 3 'Structure model' pdbx_seq_map_depositor_info 6 4 'Structure model' chem_comp_atom 7 4 'Structure model' chem_comp_bond 8 4 'Structure model' database_2 9 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.pdbx_database_id_DOI' 6 2 'Structure model' '_citation.title' 7 2 'Structure model' '_citation.year' 8 3 'Structure model' '_citation.journal_volume' 9 3 'Structure model' '_citation.page_first' 10 3 'Structure model' '_citation.page_last' 11 3 'Structure model' '_citation.pdbx_database_id_PubMed' 12 3 'Structure model' '_citation.title' 13 3 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code' 14 3 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code_mod' 15 4 'Structure model' '_database_2.pdbx_DOI' 16 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5N7L _pdbx_database_status.recvd_initial_deposition_date 2017-02-20 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Fulara, A.' 1 ? 'Savvides, S.N.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Sci Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2045-2322 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 8 _citation.language ? _citation.page_first 16760 _citation.page_last 16760 _citation.title 'Structure and oligomerization of the periplasmic domain of GspL from the type II secretion system of Pseudomonas aeruginosa.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41598-018-34956-w _citation.pdbx_database_id_PubMed 30425318 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fulara, A.' 1 ? primary 'Vandenberghe, I.' 2 ? primary 'Read, R.J.' 3 ? primary 'Devreese, B.' 4 ? primary 'Savvides, S.N.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Type II secretion system protein L' 8112.118 1 ? ? 'periplasmic domain' ? 2 non-polymer syn 'BROMIDE ION' 79.904 3 ? ? 'Glu- side chains' ? 3 non-polymer syn 'GLUTAMIC ACID' 147.129 3 ? ? ? ? 4 water nat water 18.015 12 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'T2SS protein L,General secretion pathway protein L' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GQLLGLLGQAATVIGGEPTVSVEQLDFSAARGDVALQVRAPGFDVLERLRSRLSESGLAVQLGSASRDGSTVSARLVIGG _entity_poly.pdbx_seq_one_letter_code_can GQLLGLLGQAATVIGGEPTVSVEQLDFSAARGDVALQVRAPGFDVLERLRSRLSESGLAVQLGSASRDGSTVSARLVIGG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'BROMIDE ION' BR 3 'GLUTAMIC ACID' GLU 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLN n 1 3 LEU n 1 4 LEU n 1 5 GLY n 1 6 LEU n 1 7 LEU n 1 8 GLY n 1 9 GLN n 1 10 ALA n 1 11 ALA n 1 12 THR n 1 13 VAL n 1 14 ILE n 1 15 GLY n 1 16 GLY n 1 17 GLU n 1 18 PRO n 1 19 THR n 1 20 VAL n 1 21 SER n 1 22 VAL n 1 23 GLU n 1 24 GLN n 1 25 LEU n 1 26 ASP n 1 27 PHE n 1 28 SER n 1 29 ALA n 1 30 ALA n 1 31 ARG n 1 32 GLY n 1 33 ASP n 1 34 VAL n 1 35 ALA n 1 36 LEU n 1 37 GLN n 1 38 VAL n 1 39 ARG n 1 40 ALA n 1 41 PRO n 1 42 GLY n 1 43 PHE n 1 44 ASP n 1 45 VAL n 1 46 LEU n 1 47 GLU n 1 48 ARG n 1 49 LEU n 1 50 ARG n 1 51 SER n 1 52 ARG n 1 53 LEU n 1 54 SER n 1 55 GLU n 1 56 SER n 1 57 GLY n 1 58 LEU n 1 59 ALA n 1 60 VAL n 1 61 GLN n 1 62 LEU n 1 63 GLY n 1 64 SER n 1 65 ALA n 1 66 SER n 1 67 ARG n 1 68 ASP n 1 69 GLY n 1 70 SER n 1 71 THR n 1 72 VAL n 1 73 SER n 1 74 ALA n 1 75 ARG n 1 76 LEU n 1 77 VAL n 1 78 ILE n 1 79 GLY n 1 80 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 80 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'xcpY, PA3096' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas aeruginosa PAO1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 208964 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pRSF 1b' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BR non-polymer . 'BROMIDE ION' ? 'Br -1' 79.904 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 303 303 GLY GLY A . n A 1 2 GLN 2 304 304 GLN GLN A . n A 1 3 LEU 3 305 305 LEU LEU A . n A 1 4 LEU 4 306 306 LEU LEU A . n A 1 5 GLY 5 307 307 GLY GLY A . n A 1 6 LEU 6 308 308 LEU LEU A . n A 1 7 LEU 7 309 309 LEU LEU A . n A 1 8 GLY 8 310 310 GLY GLY A . n A 1 9 GLN 9 311 311 GLN GLN A . n A 1 10 ALA 10 312 312 ALA ALA A . n A 1 11 ALA 11 313 313 ALA ALA A . n A 1 12 THR 12 314 314 THR THR A . n A 1 13 VAL 13 315 315 VAL VAL A . n A 1 14 ILE 14 316 316 ILE ILE A . n A 1 15 GLY 15 317 317 GLY GLY A . n A 1 16 GLY 16 318 318 GLY GLY A . n A 1 17 GLU 17 319 319 GLU GLU A . n A 1 18 PRO 18 320 320 PRO PRO A . n A 1 19 THR 19 321 321 THR THR A . n A 1 20 VAL 20 322 322 VAL VAL A . n A 1 21 SER 21 323 323 SER SER A . n A 1 22 VAL 22 324 324 VAL VAL A . n A 1 23 GLU 23 325 325 GLU GLU A . n A 1 24 GLN 24 326 326 GLN GLN A . n A 1 25 LEU 25 327 327 LEU LEU A . n A 1 26 ASP 26 328 328 ASP ASP A . n A 1 27 PHE 27 329 329 PHE PHE A . n A 1 28 SER 28 330 330 SER SER A . n A 1 29 ALA 29 331 331 ALA ALA A . n A 1 30 ALA 30 332 332 ALA ALA A . n A 1 31 ARG 31 333 333 ARG ARG A . n A 1 32 GLY 32 334 334 GLY GLY A . n A 1 33 ASP 33 335 335 ASP ASP A . n A 1 34 VAL 34 336 336 VAL VAL A . n A 1 35 ALA 35 337 337 ALA ALA A . n A 1 36 LEU 36 338 338 LEU LEU A . n A 1 37 GLN 37 339 339 GLN GLN A . n A 1 38 VAL 38 340 340 VAL VAL A . n A 1 39 ARG 39 341 341 ARG ARG A . n A 1 40 ALA 40 342 342 ALA ALA A . n A 1 41 PRO 41 343 343 PRO PRO A . n A 1 42 GLY 42 344 344 GLY GLY A . n A 1 43 PHE 43 345 345 PHE PHE A . n A 1 44 ASP 44 346 346 ASP ASP A . n A 1 45 VAL 45 347 347 VAL VAL A . n A 1 46 LEU 46 348 348 LEU LEU A . n A 1 47 GLU 47 349 349 GLU GLU A . n A 1 48 ARG 48 350 350 ARG ARG A . n A 1 49 LEU 49 351 351 LEU LEU A . n A 1 50 ARG 50 352 352 ARG ARG A . n A 1 51 SER 51 353 353 SER SER A . n A 1 52 ARG 52 354 354 ARG ARG A . n A 1 53 LEU 53 355 355 LEU LEU A . n A 1 54 SER 54 356 356 SER SER A . n A 1 55 GLU 55 357 357 GLU GLU A . n A 1 56 SER 56 358 358 SER SER A . n A 1 57 GLY 57 359 359 GLY GLY A . n A 1 58 LEU 58 360 360 LEU LEU A . n A 1 59 ALA 59 361 361 ALA ALA A . n A 1 60 VAL 60 362 362 VAL VAL A . n A 1 61 GLN 61 363 363 GLN GLN A . n A 1 62 LEU 62 364 364 LEU LEU A . n A 1 63 GLY 63 365 365 GLY GLY A . n A 1 64 SER 64 366 366 SER SER A . n A 1 65 ALA 65 367 367 ALA ALA A . n A 1 66 SER 66 368 368 SER SER A . n A 1 67 ARG 67 369 369 ARG ARG A . n A 1 68 ASP 68 370 370 ASP ASP A . n A 1 69 GLY 69 371 371 GLY GLY A . n A 1 70 SER 70 372 372 SER SER A . n A 1 71 THR 71 373 373 THR THR A . n A 1 72 VAL 72 374 374 VAL VAL A . n A 1 73 SER 73 375 375 SER SER A . n A 1 74 ALA 74 376 376 ALA ALA A . n A 1 75 ARG 75 377 377 ARG ARG A . n A 1 76 LEU 76 378 378 LEU LEU A . n A 1 77 VAL 77 379 379 VAL VAL A . n A 1 78 ILE 78 380 380 ILE ILE A . n A 1 79 GLY 79 381 381 GLY GLY A . n A 1 80 GLY 80 382 382 GLY GLY A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BR 1 401 1 BR BR A . C 2 BR 1 402 2 BR BR A . D 2 BR 1 403 3 BR BR A . E 3 GLU 1 404 1 GLU GLU A . F 3 GLU 1 405 2 GLU GLU A . G 3 GLU 1 406 3 GLU GLU A . H 4 HOH 1 501 7 HOH HOH A . H 4 HOH 2 502 11 HOH HOH A . H 4 HOH 3 503 5 HOH HOH A . H 4 HOH 4 504 10 HOH HOH A . H 4 HOH 5 505 12 HOH HOH A . H 4 HOH 6 506 4 HOH HOH A . H 4 HOH 7 507 2 HOH HOH A . H 4 HOH 8 508 8 HOH HOH A . H 4 HOH 9 509 3 HOH HOH A . H 4 HOH 10 510 1 HOH HOH A . H 4 HOH 11 511 6 HOH HOH A . H 4 HOH 12 512 9 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A GLU 404 ? N ? E GLU 1 N 2 1 N 1 A GLU 404 ? CA ? E GLU 1 CA 3 1 N 1 A GLU 404 ? C ? E GLU 1 C 4 1 N 1 A GLU 404 ? O ? E GLU 1 O 5 1 N 1 A GLU 404 ? OXT ? E GLU 1 OXT 6 1 N 1 A GLU 405 ? N ? F GLU 1 N 7 1 N 1 A GLU 405 ? C ? F GLU 1 C 8 1 N 1 A GLU 405 ? O ? F GLU 1 O 9 1 N 1 A GLU 405 ? OXT ? F GLU 1 OXT 10 1 N 1 A GLU 406 ? N ? G GLU 1 N 11 1 N 1 A GLU 406 ? CA ? G GLU 1 CA 12 1 N 1 A GLU 406 ? C ? G GLU 1 C 13 1 N 1 A GLU 406 ? O ? G GLU 1 O 14 1 N 1 A GLU 406 ? OXT ? G GLU 1 OXT # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'model building' ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.11.1 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.11.1_2575 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 6 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5N7L _cell.details ? _cell.formula_units_Z ? _cell.length_a 100.439 _cell.length_a_esd ? _cell.length_b 100.439 _cell.length_b_esd ? _cell.length_c 98.848 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5N7L _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5N7L _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 6.23 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 80.25 _exptl_crystal.description bipiramide _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.3 M KBr or 0.2 M MgCl2, 0.1 M sodium cacodylate, pH=6.5, gamma-PGA' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-01-31 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9801 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SOLEIL BEAMLINE PROXIMA 2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9801 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'PROXIMA 2' _diffrn_source.pdbx_synchrotron_site SOLEIL # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5N7L _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.5 _reflns.d_resolution_low 41 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 9039 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 12.97 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.56 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.13 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.5 _reflns_shell.d_res_low 2.65 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1419 _reflns_shell.percent_possible_all 98.5 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 12.02 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 168.830 _refine.B_iso_mean 75.5813 _refine.B_iso_min 39.500 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5N7L _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.5010 _refine.ls_d_res_low 40.8940 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 9018 _refine.ls_number_reflns_R_free 902 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.6100 _refine.ls_percent_reflns_R_free 10.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2031 _refine.ls_R_factor_R_free 0.2204 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2012 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.350 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5N7S _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 26.7000 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3100 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.5010 _refine_hist.d_res_low 40.8940 _refine_hist.pdbx_number_atoms_ligand 19 _refine_hist.number_atoms_solvent 12 _refine_hist.number_atoms_total 600 _refine_hist.pdbx_number_residues_total 80 _refine_hist.pdbx_B_iso_mean_ligand 105.04 _refine_hist.pdbx_B_iso_mean_solvent 65.58 _refine_hist.pdbx_number_atoms_protein 569 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? 611 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.805 ? 825 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.047 ? 99 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 ? 112 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 2.159 ? 483 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.5006 2.6573 1443 . 143 1300 98.0000 . . . 0.3603 0.0000 0.3449 . . . . . . 6 . . . 'X-RAY DIFFRACTION' 2.6573 2.8624 1478 . 148 1330 100.0000 . . . 0.3238 0.0000 0.2994 . . . . . . 6 . . . 'X-RAY DIFFRACTION' 2.8624 3.1503 1492 . 150 1342 100.0000 . . . 0.2683 0.0000 0.2615 . . . . . . 6 . . . 'X-RAY DIFFRACTION' 3.1503 3.6060 1497 . 149 1348 100.0000 . . . 0.2454 0.0000 0.1967 . . . . . . 6 . . . 'X-RAY DIFFRACTION' 3.6060 4.5422 1509 . 152 1357 100.0000 . . . 0.1979 0.0000 0.1688 . . . . . . 6 . . . 'X-RAY DIFFRACTION' 4.5422 40.8991 1599 . 160 1439 100.0000 . . . 0.1801 0.0000 0.1769 . . . . . . 6 . . . # _struct.entry_id 5N7L _struct.title 'Crystal structure of the periplasmic domain of XcpY, tI crystal form.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5N7L _struct_keywords.text 'periplasm, ferrodoxin fold, GspL protein, protein transport' _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GSPL_PSEAE _struct_ref.pdbx_db_accession P25060 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GQLLGLLGQAATVIGGEPTVSVEQLDFSAARGDVALQVRAPGFDVLERLRSRLSESGLAVQLGSASRDGSTVSARLVIGG ; _struct_ref.pdbx_align_begin 303 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5N7L _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 80 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P25060 _struct_ref_seq.db_align_beg 303 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 382 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 303 _struct_ref_seq.pdbx_auth_seq_align_end 382 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1640 ? 1 MORE -14 ? 1 'SSA (A^2)' 8000 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_554 -x+1/2,y,-z-1/4 -1.0000000000 0.0000000000 0.0000000000 50.2195000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -24.7120000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLN A 2 ? GLY A 16 ? GLN A 304 GLY A 318 1 ? 15 HELX_P HELX_P2 AA2 GLY A 42 ? SER A 56 ? GLY A 344 SER A 358 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 21 ? SER A 28 ? SER A 323 SER A 330 AA1 2 ASP A 33 ? ALA A 40 ? ASP A 335 ALA A 342 AA1 3 THR A 71 ? ILE A 78 ? THR A 373 ILE A 380 AA1 4 VAL A 60 ? ASP A 68 ? VAL A 362 ASP A 370 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER A 21 ? N SER A 323 O ARG A 39 ? O ARG A 341 AA1 2 3 N ALA A 40 ? N ALA A 342 O VAL A 72 ? O VAL A 374 AA1 3 4 O ARG A 75 ? O ARG A 377 N GLY A 63 ? N GLY A 365 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A BR 401 ? 1 'binding site for residue BR A 401' AC2 Software A BR 402 ? 2 'binding site for residue BR A 402' AC3 Software A BR 403 ? 2 'binding site for residue BR A 403' AC4 Software A GLU 404 ? 6 'binding site for residue GLU A 404' AC5 Software A GLU 405 ? 4 'binding site for residue GLU A 405' AC6 Software A GLU 406 ? 5 'binding site for residue GLU A 406' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 VAL A 22 ? VAL A 324 . ? 1_555 ? 2 AC2 2 LEU A 6 ? LEU A 308 . ? 1_555 ? 3 AC2 2 ALA A 59 ? ALA A 361 . ? 1_555 ? 4 AC3 2 PHE A 43 ? PHE A 345 . ? 10_555 ? 5 AC3 2 PHE A 43 ? PHE A 345 . ? 1_555 ? 6 AC4 6 GLN A 61 ? GLN A 363 . ? 1_555 ? 7 AC4 6 GLY A 63 ? GLY A 365 . ? 1_555 ? 8 AC4 6 SER A 64 ? SER A 366 . ? 1_555 ? 9 AC4 6 ARG A 75 ? ARG A 377 . ? 1_555 ? 10 AC4 6 VAL A 77 ? VAL A 379 . ? 1_555 ? 11 AC4 6 HOH H . ? HOH A 505 . ? 1_555 ? 12 AC5 4 PRO A 18 ? PRO A 320 . ? 1_555 ? 13 AC5 4 THR A 19 ? THR A 321 . ? 1_555 ? 14 AC5 4 GLY A 69 ? GLY A 371 . ? 10_555 ? 15 AC5 4 HOH H . ? HOH A 501 . ? 1_555 ? 16 AC6 5 GLN A 61 ? GLN A 363 . ? 15_555 ? 17 AC6 5 SER A 66 ? SER A 368 . ? 1_555 ? 18 AC6 5 ARG A 67 ? ARG A 369 . ? 1_555 ? 19 AC6 5 ASP A 68 ? ASP A 370 . ? 1_555 ? 20 AC6 5 HOH H . ? HOH A 505 . ? 15_555 ? # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A BR 403 ? D BR . 2 1 A HOH 509 ? H HOH . # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 15.5543 _pdbx_refine_tls.origin_y -0.0021 _pdbx_refine_tls.origin_z -5.7139 _pdbx_refine_tls.T[1][1] 0.4193 _pdbx_refine_tls.T[2][2] 0.6027 _pdbx_refine_tls.T[3][3] 0.5363 _pdbx_refine_tls.T[1][2] -0.0164 _pdbx_refine_tls.T[1][3] 0.0707 _pdbx_refine_tls.T[2][3] -0.0253 _pdbx_refine_tls.L[1][1] 0.8072 _pdbx_refine_tls.L[2][2] 0.7923 _pdbx_refine_tls.L[3][3] 1.4559 _pdbx_refine_tls.L[1][2] 0.7396 _pdbx_refine_tls.L[1][3] 0.0282 _pdbx_refine_tls.L[2][3] 0.4283 _pdbx_refine_tls.S[1][1] 0.0411 _pdbx_refine_tls.S[2][2] 0.1767 _pdbx_refine_tls.S[3][3] 0.0005 _pdbx_refine_tls.S[1][2] 0.3037 _pdbx_refine_tls.S[1][3] 0.1642 _pdbx_refine_tls.S[2][3] -0.1697 _pdbx_refine_tls.S[2][1] -0.1140 _pdbx_refine_tls.S[3][1] -0.0538 _pdbx_refine_tls.S[3][2] 0.2990 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 B 1 B 3 all ? ? ? ? ? 'X-RAY DIFFRACTION' 2 1 A 303 A 382 all ? ? ? ? ? 'X-RAY DIFFRACTION' 3 1 C 1 C 1 all ? ? ? ? ? 'X-RAY DIFFRACTION' 4 1 C 2 C 3 all ? ? ? ? ? 'X-RAY DIFFRACTION' 5 1 S 1 S 7 all ? ? ? ? ? 'X-RAY DIFFRACTION' 6 1 S 8 S 8 all ? ? ? ? ? 'X-RAY DIFFRACTION' 7 1 S 9 S 12 all ? ? ? ? ? # _phasing.method MR # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 BR BR BR N N 57 GLN N N N N 58 GLN CA C N S 59 GLN C C N N 60 GLN O O N N 61 GLN CB C N N 62 GLN CG C N N 63 GLN CD C N N 64 GLN OE1 O N N 65 GLN NE2 N N N 66 GLN OXT O N N 67 GLN H H N N 68 GLN H2 H N N 69 GLN HA H N N 70 GLN HB2 H N N 71 GLN HB3 H N N 72 GLN HG2 H N N 73 GLN HG3 H N N 74 GLN HE21 H N N 75 GLN HE22 H N N 76 GLN HXT H N N 77 GLU N N N N 78 GLU CA C N S 79 GLU C C N N 80 GLU O O N N 81 GLU CB C N N 82 GLU CG C N N 83 GLU CD C N N 84 GLU OE1 O N N 85 GLU OE2 O N N 86 GLU OXT O N N 87 GLU H H N N 88 GLU H2 H N N 89 GLU HA H N N 90 GLU HB2 H N N 91 GLU HB3 H N N 92 GLU HG2 H N N 93 GLU HG3 H N N 94 GLU HE2 H N N 95 GLU HXT H N N 96 GLY N N N N 97 GLY CA C N N 98 GLY C C N N 99 GLY O O N N 100 GLY OXT O N N 101 GLY H H N N 102 GLY H2 H N N 103 GLY HA2 H N N 104 GLY HA3 H N N 105 GLY HXT H N N 106 HOH O O N N 107 HOH H1 H N N 108 HOH H2 H N N 109 ILE N N N N 110 ILE CA C N S 111 ILE C C N N 112 ILE O O N N 113 ILE CB C N S 114 ILE CG1 C N N 115 ILE CG2 C N N 116 ILE CD1 C N N 117 ILE OXT O N N 118 ILE H H N N 119 ILE H2 H N N 120 ILE HA H N N 121 ILE HB H N N 122 ILE HG12 H N N 123 ILE HG13 H N N 124 ILE HG21 H N N 125 ILE HG22 H N N 126 ILE HG23 H N N 127 ILE HD11 H N N 128 ILE HD12 H N N 129 ILE HD13 H N N 130 ILE HXT H N N 131 LEU N N N N 132 LEU CA C N S 133 LEU C C N N 134 LEU O O N N 135 LEU CB C N N 136 LEU CG C N N 137 LEU CD1 C N N 138 LEU CD2 C N N 139 LEU OXT O N N 140 LEU H H N N 141 LEU H2 H N N 142 LEU HA H N N 143 LEU HB2 H N N 144 LEU HB3 H N N 145 LEU HG H N N 146 LEU HD11 H N N 147 LEU HD12 H N N 148 LEU HD13 H N N 149 LEU HD21 H N N 150 LEU HD22 H N N 151 LEU HD23 H N N 152 LEU HXT H N N 153 PHE N N N N 154 PHE CA C N S 155 PHE C C N N 156 PHE O O N N 157 PHE CB C N N 158 PHE CG C Y N 159 PHE CD1 C Y N 160 PHE CD2 C Y N 161 PHE CE1 C Y N 162 PHE CE2 C Y N 163 PHE CZ C Y N 164 PHE OXT O N N 165 PHE H H N N 166 PHE H2 H N N 167 PHE HA H N N 168 PHE HB2 H N N 169 PHE HB3 H N N 170 PHE HD1 H N N 171 PHE HD2 H N N 172 PHE HE1 H N N 173 PHE HE2 H N N 174 PHE HZ H N N 175 PHE HXT H N N 176 PRO N N N N 177 PRO CA C N S 178 PRO C C N N 179 PRO O O N N 180 PRO CB C N N 181 PRO CG C N N 182 PRO CD C N N 183 PRO OXT O N N 184 PRO H H N N 185 PRO HA H N N 186 PRO HB2 H N N 187 PRO HB3 H N N 188 PRO HG2 H N N 189 PRO HG3 H N N 190 PRO HD2 H N N 191 PRO HD3 H N N 192 PRO HXT H N N 193 SER N N N N 194 SER CA C N S 195 SER C C N N 196 SER O O N N 197 SER CB C N N 198 SER OG O N N 199 SER OXT O N N 200 SER H H N N 201 SER H2 H N N 202 SER HA H N N 203 SER HB2 H N N 204 SER HB3 H N N 205 SER HG H N N 206 SER HXT H N N 207 THR N N N N 208 THR CA C N S 209 THR C C N N 210 THR O O N N 211 THR CB C N R 212 THR OG1 O N N 213 THR CG2 C N N 214 THR OXT O N N 215 THR H H N N 216 THR H2 H N N 217 THR HA H N N 218 THR HB H N N 219 THR HG1 H N N 220 THR HG21 H N N 221 THR HG22 H N N 222 THR HG23 H N N 223 THR HXT H N N 224 VAL N N N N 225 VAL CA C N S 226 VAL C C N N 227 VAL O O N N 228 VAL CB C N N 229 VAL CG1 C N N 230 VAL CG2 C N N 231 VAL OXT O N N 232 VAL H H N N 233 VAL H2 H N N 234 VAL HA H N N 235 VAL HB H N N 236 VAL HG11 H N N 237 VAL HG12 H N N 238 VAL HG13 H N N 239 VAL HG21 H N N 240 VAL HG22 H N N 241 VAL HG23 H N N 242 VAL HXT H N N 243 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 GLN N CA sing N N 54 GLN N H sing N N 55 GLN N H2 sing N N 56 GLN CA C sing N N 57 GLN CA CB sing N N 58 GLN CA HA sing N N 59 GLN C O doub N N 60 GLN C OXT sing N N 61 GLN CB CG sing N N 62 GLN CB HB2 sing N N 63 GLN CB HB3 sing N N 64 GLN CG CD sing N N 65 GLN CG HG2 sing N N 66 GLN CG HG3 sing N N 67 GLN CD OE1 doub N N 68 GLN CD NE2 sing N N 69 GLN NE2 HE21 sing N N 70 GLN NE2 HE22 sing N N 71 GLN OXT HXT sing N N 72 GLU N CA sing N N 73 GLU N H sing N N 74 GLU N H2 sing N N 75 GLU CA C sing N N 76 GLU CA CB sing N N 77 GLU CA HA sing N N 78 GLU C O doub N N 79 GLU C OXT sing N N 80 GLU CB CG sing N N 81 GLU CB HB2 sing N N 82 GLU CB HB3 sing N N 83 GLU CG CD sing N N 84 GLU CG HG2 sing N N 85 GLU CG HG3 sing N N 86 GLU CD OE1 doub N N 87 GLU CD OE2 sing N N 88 GLU OE2 HE2 sing N N 89 GLU OXT HXT sing N N 90 GLY N CA sing N N 91 GLY N H sing N N 92 GLY N H2 sing N N 93 GLY CA C sing N N 94 GLY CA HA2 sing N N 95 GLY CA HA3 sing N N 96 GLY C O doub N N 97 GLY C OXT sing N N 98 GLY OXT HXT sing N N 99 HOH O H1 sing N N 100 HOH O H2 sing N N 101 ILE N CA sing N N 102 ILE N H sing N N 103 ILE N H2 sing N N 104 ILE CA C sing N N 105 ILE CA CB sing N N 106 ILE CA HA sing N N 107 ILE C O doub N N 108 ILE C OXT sing N N 109 ILE CB CG1 sing N N 110 ILE CB CG2 sing N N 111 ILE CB HB sing N N 112 ILE CG1 CD1 sing N N 113 ILE CG1 HG12 sing N N 114 ILE CG1 HG13 sing N N 115 ILE CG2 HG21 sing N N 116 ILE CG2 HG22 sing N N 117 ILE CG2 HG23 sing N N 118 ILE CD1 HD11 sing N N 119 ILE CD1 HD12 sing N N 120 ILE CD1 HD13 sing N N 121 ILE OXT HXT sing N N 122 LEU N CA sing N N 123 LEU N H sing N N 124 LEU N H2 sing N N 125 LEU CA C sing N N 126 LEU CA CB sing N N 127 LEU CA HA sing N N 128 LEU C O doub N N 129 LEU C OXT sing N N 130 LEU CB CG sing N N 131 LEU CB HB2 sing N N 132 LEU CB HB3 sing N N 133 LEU CG CD1 sing N N 134 LEU CG CD2 sing N N 135 LEU CG HG sing N N 136 LEU CD1 HD11 sing N N 137 LEU CD1 HD12 sing N N 138 LEU CD1 HD13 sing N N 139 LEU CD2 HD21 sing N N 140 LEU CD2 HD22 sing N N 141 LEU CD2 HD23 sing N N 142 LEU OXT HXT sing N N 143 PHE N CA sing N N 144 PHE N H sing N N 145 PHE N H2 sing N N 146 PHE CA C sing N N 147 PHE CA CB sing N N 148 PHE CA HA sing N N 149 PHE C O doub N N 150 PHE C OXT sing N N 151 PHE CB CG sing N N 152 PHE CB HB2 sing N N 153 PHE CB HB3 sing N N 154 PHE CG CD1 doub Y N 155 PHE CG CD2 sing Y N 156 PHE CD1 CE1 sing Y N 157 PHE CD1 HD1 sing N N 158 PHE CD2 CE2 doub Y N 159 PHE CD2 HD2 sing N N 160 PHE CE1 CZ doub Y N 161 PHE CE1 HE1 sing N N 162 PHE CE2 CZ sing Y N 163 PHE CE2 HE2 sing N N 164 PHE CZ HZ sing N N 165 PHE OXT HXT sing N N 166 PRO N CA sing N N 167 PRO N CD sing N N 168 PRO N H sing N N 169 PRO CA C sing N N 170 PRO CA CB sing N N 171 PRO CA HA sing N N 172 PRO C O doub N N 173 PRO C OXT sing N N 174 PRO CB CG sing N N 175 PRO CB HB2 sing N N 176 PRO CB HB3 sing N N 177 PRO CG CD sing N N 178 PRO CG HG2 sing N N 179 PRO CG HG3 sing N N 180 PRO CD HD2 sing N N 181 PRO CD HD3 sing N N 182 PRO OXT HXT sing N N 183 SER N CA sing N N 184 SER N H sing N N 185 SER N H2 sing N N 186 SER CA C sing N N 187 SER CA CB sing N N 188 SER CA HA sing N N 189 SER C O doub N N 190 SER C OXT sing N N 191 SER CB OG sing N N 192 SER CB HB2 sing N N 193 SER CB HB3 sing N N 194 SER OG HG sing N N 195 SER OXT HXT sing N N 196 THR N CA sing N N 197 THR N H sing N N 198 THR N H2 sing N N 199 THR CA C sing N N 200 THR CA CB sing N N 201 THR CA HA sing N N 202 THR C O doub N N 203 THR C OXT sing N N 204 THR CB OG1 sing N N 205 THR CB CG2 sing N N 206 THR CB HB sing N N 207 THR OG1 HG1 sing N N 208 THR CG2 HG21 sing N N 209 THR CG2 HG22 sing N N 210 THR CG2 HG23 sing N N 211 THR OXT HXT sing N N 212 VAL N CA sing N N 213 VAL N H sing N N 214 VAL N H2 sing N N 215 VAL CA C sing N N 216 VAL CA CB sing N N 217 VAL CA HA sing N N 218 VAL C O doub N N 219 VAL C OXT sing N N 220 VAL CB CG1 sing N N 221 VAL CB CG2 sing N N 222 VAL CB HB sing N N 223 VAL CG1 HG11 sing N N 224 VAL CG1 HG12 sing N N 225 VAL CG1 HG13 sing N N 226 VAL CG2 HG21 sing N N 227 VAL CG2 HG22 sing N N 228 VAL CG2 HG23 sing N N 229 VAL OXT HXT sing N N 230 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5N7S _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5N7L _atom_sites.fract_transf_matrix[1][1] 0.009956 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009956 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010117 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol BR C N O # loop_