data_5O5A # _entry.id 5O5A # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5O5A pdb_00005o5a 10.2210/pdb5o5a/pdb WWPDB D_1200005220 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-06-13 2 'Structure model' 1 1 2018-06-27 3 'Structure model' 1 2 2024-01-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' 13 3 'Structure model' '_database_2.pdbx_DOI' 14 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5O5A _pdbx_database_status.recvd_initial_deposition_date 2017-06-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhu, J.' 1 ? 'Caflisch, A.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country FR _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Eur J Med Chem' _citation.journal_id_ASTM EJMCA5 _citation.journal_id_CSD 0493 _citation.journal_id_ISSN 1768-3254 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 155 _citation.language ? _citation.page_first 337 _citation.page_last 352 _citation.title 'Structure-based discovery of selective BRPF1 bromodomain inhibitors.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.ejmech.2018.05.037 _citation.pdbx_database_id_PubMed 29902720 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhu, J.' 1 ? primary 'Zhou, C.' 2 ? primary 'Caflisch, A.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Peregrin 13703.698 1 ? ? ? ? 2 non-polymer syn 'NITRATE ION' 62.005 1 ? ? ? ? 3 non-polymer syn '1-ethyl-~{N}-methyl-2,3-bis(oxidanylidene)-~{N}-[(1-phenylpyrazol-4-yl)methyl]-4~{H}-quinoxaline-6-carboxamide' 403.434 1 ? ? ? ? 4 water nat water 18.015 92 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Bromodomain and PHD finger-containing protein 1,Protein Br140' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMEMQLTPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNC LKYNAKDTIFYRAAVRLREQGGAVLRQARRQAEKMG ; _entity_poly.pdbx_seq_one_letter_code_can ;SMEMQLTPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNC LKYNAKDTIFYRAAVRLREQGGAVLRQARRQAEKMG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NITRATE ION' NO3 3 '1-ethyl-~{N}-methyl-2,3-bis(oxidanylidene)-~{N}-[(1-phenylpyrazol-4-yl)methyl]-4~{H}-quinoxaline-6-carboxamide' 9LN 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 GLU n 1 4 MET n 1 5 GLN n 1 6 LEU n 1 7 THR n 1 8 PRO n 1 9 PHE n 1 10 LEU n 1 11 ILE n 1 12 LEU n 1 13 LEU n 1 14 ARG n 1 15 LYS n 1 16 THR n 1 17 LEU n 1 18 GLU n 1 19 GLN n 1 20 LEU n 1 21 GLN n 1 22 GLU n 1 23 LYS n 1 24 ASP n 1 25 THR n 1 26 GLY n 1 27 ASN n 1 28 ILE n 1 29 PHE n 1 30 SER n 1 31 GLU n 1 32 PRO n 1 33 VAL n 1 34 PRO n 1 35 LEU n 1 36 SER n 1 37 GLU n 1 38 VAL n 1 39 PRO n 1 40 ASP n 1 41 TYR n 1 42 LEU n 1 43 ASP n 1 44 HIS n 1 45 ILE n 1 46 LYS n 1 47 LYS n 1 48 PRO n 1 49 MET n 1 50 ASP n 1 51 PHE n 1 52 PHE n 1 53 THR n 1 54 MET n 1 55 LYS n 1 56 GLN n 1 57 ASN n 1 58 LEU n 1 59 GLU n 1 60 ALA n 1 61 TYR n 1 62 ARG n 1 63 TYR n 1 64 LEU n 1 65 ASN n 1 66 PHE n 1 67 ASP n 1 68 ASP n 1 69 PHE n 1 70 GLU n 1 71 GLU n 1 72 ASP n 1 73 PHE n 1 74 ASN n 1 75 LEU n 1 76 ILE n 1 77 VAL n 1 78 SER n 1 79 ASN n 1 80 CYS n 1 81 LEU n 1 82 LYS n 1 83 TYR n 1 84 ASN n 1 85 ALA n 1 86 LYS n 1 87 ASP n 1 88 THR n 1 89 ILE n 1 90 PHE n 1 91 TYR n 1 92 ARG n 1 93 ALA n 1 94 ALA n 1 95 VAL n 1 96 ARG n 1 97 LEU n 1 98 ARG n 1 99 GLU n 1 100 GLN n 1 101 GLY n 1 102 GLY n 1 103 ALA n 1 104 VAL n 1 105 LEU n 1 106 ARG n 1 107 GLN n 1 108 ALA n 1 109 ARG n 1 110 ARG n 1 111 GLN n 1 112 ALA n 1 113 GLU n 1 114 LYS n 1 115 MET n 1 116 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 116 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BRPF1, BR140' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 9LN non-polymer . '1-ethyl-~{N}-methyl-2,3-bis(oxidanylidene)-~{N}-[(1-phenylpyrazol-4-yl)methyl]-4~{H}-quinoxaline-6-carboxamide' ? 'C22 H21 N5 O3' 403.434 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NO3 non-polymer . 'NITRATE ION' ? 'N O3 -1' 62.005 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 625 ? ? ? A . n A 1 2 MET 2 626 ? ? ? A . n A 1 3 GLU 3 627 627 GLU GLU A . n A 1 4 MET 4 628 628 MET MET A . n A 1 5 GLN 5 629 629 GLN GLN A . n A 1 6 LEU 6 630 630 LEU LEU A . n A 1 7 THR 7 631 631 THR THR A . n A 1 8 PRO 8 632 632 PRO PRO A . n A 1 9 PHE 9 633 633 PHE PHE A . n A 1 10 LEU 10 634 634 LEU LEU A . n A 1 11 ILE 11 635 635 ILE ILE A . n A 1 12 LEU 12 636 636 LEU LEU A . n A 1 13 LEU 13 637 637 LEU LEU A . n A 1 14 ARG 14 638 638 ARG ARG A . n A 1 15 LYS 15 639 639 LYS LYS A . n A 1 16 THR 16 640 640 THR THR A . n A 1 17 LEU 17 641 641 LEU LEU A . n A 1 18 GLU 18 642 642 GLU GLU A . n A 1 19 GLN 19 643 643 GLN GLN A . n A 1 20 LEU 20 644 644 LEU LEU A . n A 1 21 GLN 21 645 645 GLN GLN A . n A 1 22 GLU 22 646 646 GLU GLU A . n A 1 23 LYS 23 647 647 LYS LYS A . n A 1 24 ASP 24 648 648 ASP ASP A . n A 1 25 THR 25 649 649 THR THR A . n A 1 26 GLY 26 650 650 GLY GLY A . n A 1 27 ASN 27 651 651 ASN ASN A . n A 1 28 ILE 28 652 652 ILE ILE A . n A 1 29 PHE 29 653 653 PHE PHE A . n A 1 30 SER 30 654 654 SER SER A . n A 1 31 GLU 31 655 655 GLU GLU A . n A 1 32 PRO 32 656 656 PRO PRO A . n A 1 33 VAL 33 657 657 VAL VAL A . n A 1 34 PRO 34 658 658 PRO PRO A . n A 1 35 LEU 35 659 659 LEU LEU A . n A 1 36 SER 36 660 660 SER SER A . n A 1 37 GLU 37 661 661 GLU GLU A . n A 1 38 VAL 38 662 662 VAL VAL A . n A 1 39 PRO 39 663 663 PRO PRO A . n A 1 40 ASP 40 664 664 ASP ASP A . n A 1 41 TYR 41 665 665 TYR TYR A . n A 1 42 LEU 42 666 666 LEU LEU A . n A 1 43 ASP 43 667 667 ASP ASP A . n A 1 44 HIS 44 668 668 HIS HIS A . n A 1 45 ILE 45 669 669 ILE ILE A . n A 1 46 LYS 46 670 670 LYS LYS A . n A 1 47 LYS 47 671 671 LYS LYS A . n A 1 48 PRO 48 672 672 PRO PRO A . n A 1 49 MET 49 673 673 MET MET A . n A 1 50 ASP 50 674 674 ASP ASP A . n A 1 51 PHE 51 675 675 PHE PHE A . n A 1 52 PHE 52 676 676 PHE PHE A . n A 1 53 THR 53 677 677 THR THR A . n A 1 54 MET 54 678 678 MET MET A . n A 1 55 LYS 55 679 679 LYS LYS A . n A 1 56 GLN 56 680 680 GLN GLN A . n A 1 57 ASN 57 681 681 ASN ASN A . n A 1 58 LEU 58 682 682 LEU LEU A . n A 1 59 GLU 59 683 683 GLU GLU A . n A 1 60 ALA 60 684 684 ALA ALA A . n A 1 61 TYR 61 685 685 TYR TYR A . n A 1 62 ARG 62 686 686 ARG ARG A . n A 1 63 TYR 63 687 687 TYR TYR A . n A 1 64 LEU 64 688 688 LEU LEU A . n A 1 65 ASN 65 689 689 ASN ASN A . n A 1 66 PHE 66 690 690 PHE PHE A . n A 1 67 ASP 67 691 691 ASP ASP A . n A 1 68 ASP 68 692 692 ASP ASP A . n A 1 69 PHE 69 693 693 PHE PHE A . n A 1 70 GLU 70 694 694 GLU GLU A . n A 1 71 GLU 71 695 695 GLU GLU A . n A 1 72 ASP 72 696 696 ASP ASP A . n A 1 73 PHE 73 697 697 PHE PHE A . n A 1 74 ASN 74 698 698 ASN ASN A . n A 1 75 LEU 75 699 699 LEU LEU A . n A 1 76 ILE 76 700 700 ILE ILE A . n A 1 77 VAL 77 701 701 VAL VAL A . n A 1 78 SER 78 702 702 SER SER A . n A 1 79 ASN 79 703 703 ASN ASN A . n A 1 80 CYS 80 704 704 CYS CYS A . n A 1 81 LEU 81 705 705 LEU LEU A . n A 1 82 LYS 82 706 706 LYS LYS A . n A 1 83 TYR 83 707 707 TYR TYR A . n A 1 84 ASN 84 708 708 ASN ASN A . n A 1 85 ALA 85 709 709 ALA ALA A . n A 1 86 LYS 86 710 710 LYS LYS A . n A 1 87 ASP 87 711 711 ASP ASP A . n A 1 88 THR 88 712 712 THR THR A . n A 1 89 ILE 89 713 713 ILE ILE A . n A 1 90 PHE 90 714 714 PHE PHE A . n A 1 91 TYR 91 715 715 TYR TYR A . n A 1 92 ARG 92 716 716 ARG ARG A . n A 1 93 ALA 93 717 717 ALA ALA A . n A 1 94 ALA 94 718 718 ALA ALA A . n A 1 95 VAL 95 719 719 VAL VAL A . n A 1 96 ARG 96 720 720 ARG ARG A . n A 1 97 LEU 97 721 721 LEU LEU A . n A 1 98 ARG 98 722 722 ARG ARG A . n A 1 99 GLU 99 723 723 GLU GLU A . n A 1 100 GLN 100 724 724 GLN GLN A . n A 1 101 GLY 101 725 725 GLY GLY A . n A 1 102 GLY 102 726 726 GLY GLY A . n A 1 103 ALA 103 727 727 ALA ALA A . n A 1 104 VAL 104 728 728 VAL VAL A . n A 1 105 LEU 105 729 729 LEU LEU A . n A 1 106 ARG 106 730 730 ARG ARG A . n A 1 107 GLN 107 731 731 GLN GLN A . n A 1 108 ALA 108 732 732 ALA ALA A . n A 1 109 ARG 109 733 733 ARG ARG A . n A 1 110 ARG 110 734 734 ARG ARG A . n A 1 111 GLN 111 735 735 GLN GLN A . n A 1 112 ALA 112 736 736 ALA ALA A . n A 1 113 GLU 113 737 737 GLU GLU A . n A 1 114 LYS 114 738 738 LYS LYS A . n A 1 115 MET 115 739 739 MET MET A . n A 1 116 GLY 116 740 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 1 801 1 NO3 NO3 A . C 3 9LN 1 802 1 9LN DRG A . D 4 HOH 1 901 10 HOH HOH A . D 4 HOH 2 902 7 HOH HOH A . D 4 HOH 3 903 75 HOH HOH A . D 4 HOH 4 904 88 HOH HOH A . D 4 HOH 5 905 66 HOH HOH A . D 4 HOH 6 906 89 HOH HOH A . D 4 HOH 7 907 6 HOH HOH A . D 4 HOH 8 908 15 HOH HOH A . D 4 HOH 9 909 69 HOH HOH A . D 4 HOH 10 910 94 HOH HOH A . D 4 HOH 11 911 2 HOH HOH A . D 4 HOH 12 912 14 HOH HOH A . D 4 HOH 13 913 3 HOH HOH A . D 4 HOH 14 914 39 HOH HOH A . D 4 HOH 15 915 37 HOH HOH A . D 4 HOH 16 916 83 HOH HOH A . D 4 HOH 17 917 30 HOH HOH A . D 4 HOH 18 918 35 HOH HOH A . D 4 HOH 19 919 23 HOH HOH A . D 4 HOH 20 920 49 HOH HOH A . D 4 HOH 21 921 80 HOH HOH A . D 4 HOH 22 922 38 HOH HOH A . D 4 HOH 23 923 64 HOH HOH A . D 4 HOH 24 924 12 HOH HOH A . D 4 HOH 25 925 34 HOH HOH A . D 4 HOH 26 926 65 HOH HOH A . D 4 HOH 27 927 40 HOH HOH A . D 4 HOH 28 928 16 HOH HOH A . D 4 HOH 29 929 45 HOH HOH A . D 4 HOH 30 930 51 HOH HOH A . D 4 HOH 31 931 5 HOH HOH A . D 4 HOH 32 932 9 HOH HOH A . D 4 HOH 33 933 61 HOH HOH A . D 4 HOH 34 934 28 HOH HOH A . D 4 HOH 35 935 13 HOH HOH A . D 4 HOH 36 936 53 HOH HOH A . D 4 HOH 37 937 19 HOH HOH A . D 4 HOH 38 938 50 HOH HOH A . D 4 HOH 39 939 27 HOH HOH A . D 4 HOH 40 940 4 HOH HOH A . D 4 HOH 41 941 32 HOH HOH A . D 4 HOH 42 942 73 HOH HOH A . D 4 HOH 43 943 11 HOH HOH A . D 4 HOH 44 944 33 HOH HOH A . D 4 HOH 45 945 43 HOH HOH A . D 4 HOH 46 946 26 HOH HOH A . D 4 HOH 47 947 60 HOH HOH A . D 4 HOH 48 948 42 HOH HOH A . D 4 HOH 49 949 8 HOH HOH A . D 4 HOH 50 950 41 HOH HOH A . D 4 HOH 51 951 92 HOH HOH A . D 4 HOH 52 952 68 HOH HOH A . D 4 HOH 53 953 18 HOH HOH A . D 4 HOH 54 954 63 HOH HOH A . D 4 HOH 55 955 21 HOH HOH A . D 4 HOH 56 956 1 HOH HOH A . D 4 HOH 57 957 71 HOH HOH A . D 4 HOH 58 958 58 HOH HOH A . D 4 HOH 59 959 25 HOH HOH A . D 4 HOH 60 960 93 HOH HOH A . D 4 HOH 61 961 31 HOH HOH A . D 4 HOH 62 962 22 HOH HOH A . D 4 HOH 63 963 17 HOH HOH A . D 4 HOH 64 964 86 HOH HOH A . D 4 HOH 65 965 29 HOH HOH A . D 4 HOH 66 966 76 HOH HOH A . D 4 HOH 67 967 57 HOH HOH A . D 4 HOH 68 968 55 HOH HOH A . D 4 HOH 69 969 36 HOH HOH A . D 4 HOH 70 970 87 HOH HOH A . D 4 HOH 71 971 67 HOH HOH A . D 4 HOH 72 972 81 HOH HOH A . D 4 HOH 73 973 74 HOH HOH A . D 4 HOH 74 974 91 HOH HOH A . D 4 HOH 75 975 70 HOH HOH A . D 4 HOH 76 976 59 HOH HOH A . D 4 HOH 77 977 79 HOH HOH A . D 4 HOH 78 978 62 HOH HOH A . D 4 HOH 79 979 54 HOH HOH A . D 4 HOH 80 980 24 HOH HOH A . D 4 HOH 81 981 78 HOH HOH A . D 4 HOH 82 982 52 HOH HOH A . D 4 HOH 83 983 44 HOH HOH A . D 4 HOH 84 984 85 HOH HOH A . D 4 HOH 85 985 48 HOH HOH A . D 4 HOH 86 986 82 HOH HOH A . D 4 HOH 87 987 20 HOH HOH A . D 4 HOH 88 988 46 HOH HOH A . D 4 HOH 89 989 56 HOH HOH A . D 4 HOH 90 990 84 HOH HOH A . D 4 HOH 91 991 47 HOH HOH A . D 4 HOH 92 992 72 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 670 ? CD ? A LYS 46 CD 2 1 Y 1 A LYS 670 ? CE ? A LYS 46 CE 3 1 Y 1 A LYS 670 ? NZ ? A LYS 46 NZ 4 1 Y 1 A GLN 731 ? CD ? A GLN 107 CD 5 1 Y 1 A GLN 731 ? OE1 ? A GLN 107 OE1 6 1 Y 1 A GLN 731 ? NE2 ? A GLN 107 NE2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.11.1_2575: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 5O5A _cell.details ? _cell.formula_units_Z ? _cell.length_a 60.693 _cell.length_a_esd ? _cell.length_b 60.693 _cell.length_b_esd ? _cell.length_c 63.044 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5O5A _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5O5A _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.45 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 49.71 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M Bis-tris propane, pH6.5, 0.2 M Sodium nitrate, 20% PEG3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-11-27 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000020 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X06DA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000020 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X06DA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5O5A _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.60 _reflns.d_resolution_low 40.37 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 18144 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 10.6 _reflns.pdbx_Rmerge_I_obs 0.043 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 25.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.63 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.7 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 900 _reflns_shell.percent_possible_all 100.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.633 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 10.1 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.879 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5O5A _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.600 _refine.ls_d_res_low 40.37 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 18115 _refine.ls_number_reflns_R_free 1813 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.76 _refine.ls_percent_reflns_R_free 10.01 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1802 _refine.ls_R_factor_R_free 0.2016 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1778 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4LC2 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 20.31 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.14 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 937 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 92 _refine_hist.number_atoms_total 1063 _refine_hist.d_res_high 1.600 _refine_hist.d_res_low 40.37 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 ? 1031 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.886 ? 1397 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 11.478 ? 874 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.052 ? 144 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 ? 185 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.6003 1.6436 . . 139 1251 99.00 . . . 0.2359 . 0.2112 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6436 1.6919 . . 137 1217 100.00 . . . 0.2494 . 0.2095 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6919 1.7465 . . 138 1245 100.00 . . . 0.2160 . 0.1978 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7465 1.8090 . . 133 1220 100.00 . . . 0.2168 . 0.1849 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8090 1.8814 . . 133 1237 100.00 . . . 0.2266 . 0.1849 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8814 1.9670 . . 135 1257 100.00 . . . 0.2397 . 0.1950 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9670 2.0707 . . 139 1244 100.00 . . . 0.2180 . 0.1790 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0707 2.2004 . . 141 1239 100.00 . . . 0.2005 . 0.1734 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2004 2.3703 . . 145 1252 99.00 . . . 0.2179 . 0.1814 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3703 2.6088 . . 137 1258 100.00 . . . 0.2163 . 0.1850 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6088 2.9862 . . 139 1267 100.00 . . . 0.2347 . 0.2012 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9862 3.7619 . . 145 1288 100.00 . . . 0.2087 . 0.1730 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.7619 40.3840 . . 152 1327 99.00 . . . 0.1647 . 0.1625 . . . . . . . . . . # _struct.entry_id 5O5A _struct.title 'Crystal structure of the human BRPF1 bromodomain in complex with BZ032' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5O5A _struct_keywords.text ;Bromodomain and PHD finger-containing protein 1(BRPF1), monocytic leukemia zinc-finger (MOZ), Inhibitor, transcription, DNA binding protein ; _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BRPF1_HUMAN _struct_ref.pdbx_db_accession P55201 _struct_ref.pdbx_db_isoform P55201-3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MEMQLTPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCL KYNAKDTIFYRAAVRLREQGGAVLRQARRQAEKMG ; _struct_ref.pdbx_align_begin 626 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5O5A _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 116 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P55201 _struct_ref_seq.db_align_beg 626 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 740 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 626 _struct_ref_seq.pdbx_auth_seq_align_end 740 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 5O5A _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P55201 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 625 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 150 ? 1 MORE 2 ? 1 'SSA (A^2)' 6990 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details Monomer # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLN A 5 ? ASP A 24 ? GLN A 629 ASP A 648 1 ? 20 HELX_P HELX_P2 AA2 ASP A 40 ? HIS A 44 ? ASP A 664 HIS A 668 5 ? 5 HELX_P HELX_P3 AA3 ASP A 50 ? ALA A 60 ? ASP A 674 ALA A 684 1 ? 11 HELX_P HELX_P4 AA4 ASN A 65 ? ASN A 84 ? ASN A 689 ASN A 708 1 ? 20 HELX_P HELX_P5 AA5 THR A 88 ? GLU A 113 ? THR A 712 GLU A 737 1 ? 26 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NO3 801 ? 6 'binding site for residue NO3 A 801' AC2 Software A 9LN 802 ? 11 'binding site for residue 9LN A 802' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 SER A 78 ? SER A 702 . ? 6_554 ? 2 AC1 6 LEU A 81 ? LEU A 705 . ? 6_554 ? 3 AC1 6 LYS A 82 ? LYS A 706 . ? 6_554 ? 4 AC1 6 TYR A 91 ? TYR A 715 . ? 1_555 ? 5 AC1 6 ARG A 98 ? ARG A 722 . ? 1_555 ? 6 AC1 6 HOH D . ? HOH A 973 . ? 6_554 ? 7 AC2 11 ILE A 28 ? ILE A 652 . ? 1_555 ? 8 AC2 11 PHE A 29 ? PHE A 653 . ? 1_555 ? 9 AC2 11 GLU A 31 ? GLU A 655 . ? 1_555 ? 10 AC2 11 PRO A 32 ? PRO A 656 . ? 1_555 ? 11 AC2 11 PRO A 34 ? PRO A 658 . ? 1_555 ? 12 AC2 11 GLU A 37 ? GLU A 661 . ? 1_555 ? 13 AC2 11 CYS A 80 ? CYS A 704 . ? 1_555 ? 14 AC2 11 ASN A 84 ? ASN A 708 . ? 1_555 ? 15 AC2 11 PHE A 90 ? PHE A 714 . ? 1_555 ? 16 AC2 11 LYS A 114 ? LYS A 738 . ? 3_655 ? 17 AC2 11 HOH D . ? HOH A 911 . ? 1_555 ? # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 956 ? D HOH . 2 1 A HOH 990 ? D HOH . # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 15.1456 _pdbx_refine_tls.origin_y -22.6901 _pdbx_refine_tls.origin_z 0.7362 _pdbx_refine_tls.T[1][1] 0.2225 _pdbx_refine_tls.T[2][2] 0.2344 _pdbx_refine_tls.T[3][3] 0.2006 _pdbx_refine_tls.T[1][2] -0.0782 _pdbx_refine_tls.T[1][3] -0.0443 _pdbx_refine_tls.T[2][3] 0.0218 _pdbx_refine_tls.L[1][1] 1.7785 _pdbx_refine_tls.L[2][2] 3.3685 _pdbx_refine_tls.L[3][3] 1.9058 _pdbx_refine_tls.L[1][2] -0.5284 _pdbx_refine_tls.L[1][3] 0.8707 _pdbx_refine_tls.L[2][3] -1.0235 _pdbx_refine_tls.S[1][1] 0.1091 _pdbx_refine_tls.S[1][2] -0.1953 _pdbx_refine_tls.S[1][3] -0.1632 _pdbx_refine_tls.S[2][1] 0.2343 _pdbx_refine_tls.S[2][2] -0.1355 _pdbx_refine_tls.S[2][3] 0.1124 _pdbx_refine_tls.S[3][1] -0.0194 _pdbx_refine_tls.S[3][2] -0.0717 _pdbx_refine_tls.S[3][3] 0.0011 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 992 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.33 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 625 ? A SER 1 2 1 Y 1 A MET 626 ? A MET 2 3 1 Y 1 A GLY 740 ? A GLY 116 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 9LN CAA C N N 1 9LN CAB C N N 2 9LN CAF C Y N 3 9LN CAG C Y N 4 9LN CAH C Y N 5 9LN CAI C Y N 6 9LN CAJ C Y N 7 9LN CAK C Y N 8 9LN CAL C Y N 9 9LN CAM C Y N 10 9LN CAN C Y N 11 9LN CAO C Y N 12 9LN CAP C N N 13 9LN CAQ C N N 14 9LN CAT C N N 15 9LN CAU C Y N 16 9LN CAV C Y N 17 9LN CAW C Y N 18 9LN CAX C N N 19 9LN CAY C N N 20 9LN CAZ C Y N 21 9LN CBA C Y N 22 9LN NAR N Y N 23 9LN NAS N N N 24 9LN NBB N N N 25 9LN NBC N Y N 26 9LN NBD N N N 27 9LN OAC O N N 28 9LN OAD O N N 29 9LN OAE O N N 30 9LN H1 H N N 31 9LN H2 H N N 32 9LN H3 H N N 33 9LN H4 H N N 34 9LN H5 H N N 35 9LN H6 H N N 36 9LN H7 H N N 37 9LN H8 H N N 38 9LN H9 H N N 39 9LN H10 H N N 40 9LN H11 H N N 41 9LN H12 H N N 42 9LN H13 H N N 43 9LN H14 H N N 44 9LN H15 H N N 45 9LN H16 H N N 46 9LN H17 H N N 47 9LN H18 H N N 48 9LN H19 H N N 49 9LN H20 H N N 50 9LN H21 H N N 51 ALA N N N N 52 ALA CA C N S 53 ALA C C N N 54 ALA O O N N 55 ALA CB C N N 56 ALA OXT O N N 57 ALA H H N N 58 ALA H2 H N N 59 ALA HA H N N 60 ALA HB1 H N N 61 ALA HB2 H N N 62 ALA HB3 H N N 63 ALA HXT H N N 64 ARG N N N N 65 ARG CA C N S 66 ARG C C N N 67 ARG O O N N 68 ARG CB C N N 69 ARG CG C N N 70 ARG CD C N N 71 ARG NE N N N 72 ARG CZ C N N 73 ARG NH1 N N N 74 ARG NH2 N N N 75 ARG OXT O N N 76 ARG H H N N 77 ARG H2 H N N 78 ARG HA H N N 79 ARG HB2 H N N 80 ARG HB3 H N N 81 ARG HG2 H N N 82 ARG HG3 H N N 83 ARG HD2 H N N 84 ARG HD3 H N N 85 ARG HE H N N 86 ARG HH11 H N N 87 ARG HH12 H N N 88 ARG HH21 H N N 89 ARG HH22 H N N 90 ARG HXT H N N 91 ASN N N N N 92 ASN CA C N S 93 ASN C C N N 94 ASN O O N N 95 ASN CB C N N 96 ASN CG C N N 97 ASN OD1 O N N 98 ASN ND2 N N N 99 ASN OXT O N N 100 ASN H H N N 101 ASN H2 H N N 102 ASN HA H N N 103 ASN HB2 H N N 104 ASN HB3 H N N 105 ASN HD21 H N N 106 ASN HD22 H N N 107 ASN HXT H N N 108 ASP N N N N 109 ASP CA C N S 110 ASP C C N N 111 ASP O O N N 112 ASP CB C N N 113 ASP CG C N N 114 ASP OD1 O N N 115 ASP OD2 O N N 116 ASP OXT O N N 117 ASP H H N N 118 ASP H2 H N N 119 ASP HA H N N 120 ASP HB2 H N N 121 ASP HB3 H N N 122 ASP HD2 H N N 123 ASP HXT H N N 124 CYS N N N N 125 CYS CA C N R 126 CYS C C N N 127 CYS O O N N 128 CYS CB C N N 129 CYS SG S N N 130 CYS OXT O N N 131 CYS H H N N 132 CYS H2 H N N 133 CYS HA H N N 134 CYS HB2 H N N 135 CYS HB3 H N N 136 CYS HG H N N 137 CYS HXT H N N 138 GLN N N N N 139 GLN CA C N S 140 GLN C C N N 141 GLN O O N N 142 GLN CB C N N 143 GLN CG C N N 144 GLN CD C N N 145 GLN OE1 O N N 146 GLN NE2 N N N 147 GLN OXT O N N 148 GLN H H N N 149 GLN H2 H N N 150 GLN HA H N N 151 GLN HB2 H N N 152 GLN HB3 H N N 153 GLN HG2 H N N 154 GLN HG3 H N N 155 GLN HE21 H N N 156 GLN HE22 H N N 157 GLN HXT H N N 158 GLU N N N N 159 GLU CA C N S 160 GLU C C N N 161 GLU O O N N 162 GLU CB C N N 163 GLU CG C N N 164 GLU CD C N N 165 GLU OE1 O N N 166 GLU OE2 O N N 167 GLU OXT O N N 168 GLU H H N N 169 GLU H2 H N N 170 GLU HA H N N 171 GLU HB2 H N N 172 GLU HB3 H N N 173 GLU HG2 H N N 174 GLU HG3 H N N 175 GLU HE2 H N N 176 GLU HXT H N N 177 GLY N N N N 178 GLY CA C N N 179 GLY C C N N 180 GLY O O N N 181 GLY OXT O N N 182 GLY H H N N 183 GLY H2 H N N 184 GLY HA2 H N N 185 GLY HA3 H N N 186 GLY HXT H N N 187 HIS N N N N 188 HIS CA C N S 189 HIS C C N N 190 HIS O O N N 191 HIS CB C N N 192 HIS CG C Y N 193 HIS ND1 N Y N 194 HIS CD2 C Y N 195 HIS CE1 C Y N 196 HIS NE2 N Y N 197 HIS OXT O N N 198 HIS H H N N 199 HIS H2 H N N 200 HIS HA H N N 201 HIS HB2 H N N 202 HIS HB3 H N N 203 HIS HD1 H N N 204 HIS HD2 H N N 205 HIS HE1 H N N 206 HIS HE2 H N N 207 HIS HXT H N N 208 HOH O O N N 209 HOH H1 H N N 210 HOH H2 H N N 211 ILE N N N N 212 ILE CA C N S 213 ILE C C N N 214 ILE O O N N 215 ILE CB C N S 216 ILE CG1 C N N 217 ILE CG2 C N N 218 ILE CD1 C N N 219 ILE OXT O N N 220 ILE H H N N 221 ILE H2 H N N 222 ILE HA H N N 223 ILE HB H N N 224 ILE HG12 H N N 225 ILE HG13 H N N 226 ILE HG21 H N N 227 ILE HG22 H N N 228 ILE HG23 H N N 229 ILE HD11 H N N 230 ILE HD12 H N N 231 ILE HD13 H N N 232 ILE HXT H N N 233 LEU N N N N 234 LEU CA C N S 235 LEU C C N N 236 LEU O O N N 237 LEU CB C N N 238 LEU CG C N N 239 LEU CD1 C N N 240 LEU CD2 C N N 241 LEU OXT O N N 242 LEU H H N N 243 LEU H2 H N N 244 LEU HA H N N 245 LEU HB2 H N N 246 LEU HB3 H N N 247 LEU HG H N N 248 LEU HD11 H N N 249 LEU HD12 H N N 250 LEU HD13 H N N 251 LEU HD21 H N N 252 LEU HD22 H N N 253 LEU HD23 H N N 254 LEU HXT H N N 255 LYS N N N N 256 LYS CA C N S 257 LYS C C N N 258 LYS O O N N 259 LYS CB C N N 260 LYS CG C N N 261 LYS CD C N N 262 LYS CE C N N 263 LYS NZ N N N 264 LYS OXT O N N 265 LYS H H N N 266 LYS H2 H N N 267 LYS HA H N N 268 LYS HB2 H N N 269 LYS HB3 H N N 270 LYS HG2 H N N 271 LYS HG3 H N N 272 LYS HD2 H N N 273 LYS HD3 H N N 274 LYS HE2 H N N 275 LYS HE3 H N N 276 LYS HZ1 H N N 277 LYS HZ2 H N N 278 LYS HZ3 H N N 279 LYS HXT H N N 280 MET N N N N 281 MET CA C N S 282 MET C C N N 283 MET O O N N 284 MET CB C N N 285 MET CG C N N 286 MET SD S N N 287 MET CE C N N 288 MET OXT O N N 289 MET H H N N 290 MET H2 H N N 291 MET HA H N N 292 MET HB2 H N N 293 MET HB3 H N N 294 MET HG2 H N N 295 MET HG3 H N N 296 MET HE1 H N N 297 MET HE2 H N N 298 MET HE3 H N N 299 MET HXT H N N 300 NO3 N N N N 301 NO3 O1 O N N 302 NO3 O2 O N N 303 NO3 O3 O N N 304 PHE N N N N 305 PHE CA C N S 306 PHE C C N N 307 PHE O O N N 308 PHE CB C N N 309 PHE CG C Y N 310 PHE CD1 C Y N 311 PHE CD2 C Y N 312 PHE CE1 C Y N 313 PHE CE2 C Y N 314 PHE CZ C Y N 315 PHE OXT O N N 316 PHE H H N N 317 PHE H2 H N N 318 PHE HA H N N 319 PHE HB2 H N N 320 PHE HB3 H N N 321 PHE HD1 H N N 322 PHE HD2 H N N 323 PHE HE1 H N N 324 PHE HE2 H N N 325 PHE HZ H N N 326 PHE HXT H N N 327 PRO N N N N 328 PRO CA C N S 329 PRO C C N N 330 PRO O O N N 331 PRO CB C N N 332 PRO CG C N N 333 PRO CD C N N 334 PRO OXT O N N 335 PRO H H N N 336 PRO HA H N N 337 PRO HB2 H N N 338 PRO HB3 H N N 339 PRO HG2 H N N 340 PRO HG3 H N N 341 PRO HD2 H N N 342 PRO HD3 H N N 343 PRO HXT H N N 344 SER N N N N 345 SER CA C N S 346 SER C C N N 347 SER O O N N 348 SER CB C N N 349 SER OG O N N 350 SER OXT O N N 351 SER H H N N 352 SER H2 H N N 353 SER HA H N N 354 SER HB2 H N N 355 SER HB3 H N N 356 SER HG H N N 357 SER HXT H N N 358 THR N N N N 359 THR CA C N S 360 THR C C N N 361 THR O O N N 362 THR CB C N R 363 THR OG1 O N N 364 THR CG2 C N N 365 THR OXT O N N 366 THR H H N N 367 THR H2 H N N 368 THR HA H N N 369 THR HB H N N 370 THR HG1 H N N 371 THR HG21 H N N 372 THR HG22 H N N 373 THR HG23 H N N 374 THR HXT H N N 375 TYR N N N N 376 TYR CA C N S 377 TYR C C N N 378 TYR O O N N 379 TYR CB C N N 380 TYR CG C Y N 381 TYR CD1 C Y N 382 TYR CD2 C Y N 383 TYR CE1 C Y N 384 TYR CE2 C Y N 385 TYR CZ C Y N 386 TYR OH O N N 387 TYR OXT O N N 388 TYR H H N N 389 TYR H2 H N N 390 TYR HA H N N 391 TYR HB2 H N N 392 TYR HB3 H N N 393 TYR HD1 H N N 394 TYR HD2 H N N 395 TYR HE1 H N N 396 TYR HE2 H N N 397 TYR HH H N N 398 TYR HXT H N N 399 VAL N N N N 400 VAL CA C N S 401 VAL C C N N 402 VAL O O N N 403 VAL CB C N N 404 VAL CG1 C N N 405 VAL CG2 C N N 406 VAL OXT O N N 407 VAL H H N N 408 VAL H2 H N N 409 VAL HA H N N 410 VAL HB H N N 411 VAL HG11 H N N 412 VAL HG12 H N N 413 VAL HG13 H N N 414 VAL HG21 H N N 415 VAL HG22 H N N 416 VAL HG23 H N N 417 VAL HXT H N N 418 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9LN OAE CAY doub N N 1 9LN OAD CAX doub N N 2 9LN CAY CAX sing N N 3 9LN CAY NBD sing N N 4 9LN CAX NAS sing N N 5 9LN CAA CAP sing N N 6 9LN CAP NBD sing N N 7 9LN NBD CBA sing N N 8 9LN NAS CAZ sing N N 9 9LN CBA CAZ doub Y N 10 9LN CBA CAL sing Y N 11 9LN CAZ CAN sing Y N 12 9LN CAL CAK doub Y N 13 9LN CAN CAV doub Y N 14 9LN CAK CAV sing Y N 15 9LN CAV CAT sing N N 16 9LN CAT OAC doub N N 17 9LN CAT NBB sing N N 18 9LN CAB NBB sing N N 19 9LN NBB CAQ sing N N 20 9LN CAQ CAU sing N N 21 9LN CAU CAO doub Y N 22 9LN CAU CAM sing Y N 23 9LN CAO NBC sing Y N 24 9LN CAM NAR doub Y N 25 9LN NBC NAR sing Y N 26 9LN NBC CAW sing N N 27 9LN CAI CAW doub Y N 28 9LN CAI CAG sing Y N 29 9LN CAW CAJ sing Y N 30 9LN CAG CAF doub Y N 31 9LN CAJ CAH doub Y N 32 9LN CAF CAH sing Y N 33 9LN CAA H1 sing N N 34 9LN CAA H2 sing N N 35 9LN CAA H3 sing N N 36 9LN CAB H4 sing N N 37 9LN CAB H5 sing N N 38 9LN CAB H6 sing N N 39 9LN CAF H7 sing N N 40 9LN CAG H8 sing N N 41 9LN CAH H9 sing N N 42 9LN CAI H10 sing N N 43 9LN CAJ H11 sing N N 44 9LN CAK H12 sing N N 45 9LN CAL H13 sing N N 46 9LN CAM H14 sing N N 47 9LN CAN H15 sing N N 48 9LN CAO H16 sing N N 49 9LN CAP H17 sing N N 50 9LN CAP H18 sing N N 51 9LN CAQ H19 sing N N 52 9LN CAQ H20 sing N N 53 9LN NAS H21 sing N N 54 ALA N CA sing N N 55 ALA N H sing N N 56 ALA N H2 sing N N 57 ALA CA C sing N N 58 ALA CA CB sing N N 59 ALA CA HA sing N N 60 ALA C O doub N N 61 ALA C OXT sing N N 62 ALA CB HB1 sing N N 63 ALA CB HB2 sing N N 64 ALA CB HB3 sing N N 65 ALA OXT HXT sing N N 66 ARG N CA sing N N 67 ARG N H sing N N 68 ARG N H2 sing N N 69 ARG CA C sing N N 70 ARG CA CB sing N N 71 ARG CA HA sing N N 72 ARG C O doub N N 73 ARG C OXT sing N N 74 ARG CB CG sing N N 75 ARG CB HB2 sing N N 76 ARG CB HB3 sing N N 77 ARG CG CD sing N N 78 ARG CG HG2 sing N N 79 ARG CG HG3 sing N N 80 ARG CD NE sing N N 81 ARG CD HD2 sing N N 82 ARG CD HD3 sing N N 83 ARG NE CZ sing N N 84 ARG NE HE sing N N 85 ARG CZ NH1 sing N N 86 ARG CZ NH2 doub N N 87 ARG NH1 HH11 sing N N 88 ARG NH1 HH12 sing N N 89 ARG NH2 HH21 sing N N 90 ARG NH2 HH22 sing N N 91 ARG OXT HXT sing N N 92 ASN N CA sing N N 93 ASN N H sing N N 94 ASN N H2 sing N N 95 ASN CA C sing N N 96 ASN CA CB sing N N 97 ASN CA HA sing N N 98 ASN C O doub N N 99 ASN C OXT sing N N 100 ASN CB CG sing N N 101 ASN CB HB2 sing N N 102 ASN CB HB3 sing N N 103 ASN CG OD1 doub N N 104 ASN CG ND2 sing N N 105 ASN ND2 HD21 sing N N 106 ASN ND2 HD22 sing N N 107 ASN OXT HXT sing N N 108 ASP N CA sing N N 109 ASP N H sing N N 110 ASP N H2 sing N N 111 ASP CA C sing N N 112 ASP CA CB sing N N 113 ASP CA HA sing N N 114 ASP C O doub N N 115 ASP C OXT sing N N 116 ASP CB CG sing N N 117 ASP CB HB2 sing N N 118 ASP CB HB3 sing N N 119 ASP CG OD1 doub N N 120 ASP CG OD2 sing N N 121 ASP OD2 HD2 sing N N 122 ASP OXT HXT sing N N 123 CYS N CA sing N N 124 CYS N H sing N N 125 CYS N H2 sing N N 126 CYS CA C sing N N 127 CYS CA CB sing N N 128 CYS CA HA sing N N 129 CYS C O doub N N 130 CYS C OXT sing N N 131 CYS CB SG sing N N 132 CYS CB HB2 sing N N 133 CYS CB HB3 sing N N 134 CYS SG HG sing N N 135 CYS OXT HXT sing N N 136 GLN N CA sing N N 137 GLN N H sing N N 138 GLN N H2 sing N N 139 GLN CA C sing N N 140 GLN CA CB sing N N 141 GLN CA HA sing N N 142 GLN C O doub N N 143 GLN C OXT sing N N 144 GLN CB CG sing N N 145 GLN CB HB2 sing N N 146 GLN CB HB3 sing N N 147 GLN CG CD sing N N 148 GLN CG HG2 sing N N 149 GLN CG HG3 sing N N 150 GLN CD OE1 doub N N 151 GLN CD NE2 sing N N 152 GLN NE2 HE21 sing N N 153 GLN NE2 HE22 sing N N 154 GLN OXT HXT sing N N 155 GLU N CA sing N N 156 GLU N H sing N N 157 GLU N H2 sing N N 158 GLU CA C sing N N 159 GLU CA CB sing N N 160 GLU CA HA sing N N 161 GLU C O doub N N 162 GLU C OXT sing N N 163 GLU CB CG sing N N 164 GLU CB HB2 sing N N 165 GLU CB HB3 sing N N 166 GLU CG CD sing N N 167 GLU CG HG2 sing N N 168 GLU CG HG3 sing N N 169 GLU CD OE1 doub N N 170 GLU CD OE2 sing N N 171 GLU OE2 HE2 sing N N 172 GLU OXT HXT sing N N 173 GLY N CA sing N N 174 GLY N H sing N N 175 GLY N H2 sing N N 176 GLY CA C sing N N 177 GLY CA HA2 sing N N 178 GLY CA HA3 sing N N 179 GLY C O doub N N 180 GLY C OXT sing N N 181 GLY OXT HXT sing N N 182 HIS N CA sing N N 183 HIS N H sing N N 184 HIS N H2 sing N N 185 HIS CA C sing N N 186 HIS CA CB sing N N 187 HIS CA HA sing N N 188 HIS C O doub N N 189 HIS C OXT sing N N 190 HIS CB CG sing N N 191 HIS CB HB2 sing N N 192 HIS CB HB3 sing N N 193 HIS CG ND1 sing Y N 194 HIS CG CD2 doub Y N 195 HIS ND1 CE1 doub Y N 196 HIS ND1 HD1 sing N N 197 HIS CD2 NE2 sing Y N 198 HIS CD2 HD2 sing N N 199 HIS CE1 NE2 sing Y N 200 HIS CE1 HE1 sing N N 201 HIS NE2 HE2 sing N N 202 HIS OXT HXT sing N N 203 HOH O H1 sing N N 204 HOH O H2 sing N N 205 ILE N CA sing N N 206 ILE N H sing N N 207 ILE N H2 sing N N 208 ILE CA C sing N N 209 ILE CA CB sing N N 210 ILE CA HA sing N N 211 ILE C O doub N N 212 ILE C OXT sing N N 213 ILE CB CG1 sing N N 214 ILE CB CG2 sing N N 215 ILE CB HB sing N N 216 ILE CG1 CD1 sing N N 217 ILE CG1 HG12 sing N N 218 ILE CG1 HG13 sing N N 219 ILE CG2 HG21 sing N N 220 ILE CG2 HG22 sing N N 221 ILE CG2 HG23 sing N N 222 ILE CD1 HD11 sing N N 223 ILE CD1 HD12 sing N N 224 ILE CD1 HD13 sing N N 225 ILE OXT HXT sing N N 226 LEU N CA sing N N 227 LEU N H sing N N 228 LEU N H2 sing N N 229 LEU CA C sing N N 230 LEU CA CB sing N N 231 LEU CA HA sing N N 232 LEU C O doub N N 233 LEU C OXT sing N N 234 LEU CB CG sing N N 235 LEU CB HB2 sing N N 236 LEU CB HB3 sing N N 237 LEU CG CD1 sing N N 238 LEU CG CD2 sing N N 239 LEU CG HG sing N N 240 LEU CD1 HD11 sing N N 241 LEU CD1 HD12 sing N N 242 LEU CD1 HD13 sing N N 243 LEU CD2 HD21 sing N N 244 LEU CD2 HD22 sing N N 245 LEU CD2 HD23 sing N N 246 LEU OXT HXT sing N N 247 LYS N CA sing N N 248 LYS N H sing N N 249 LYS N H2 sing N N 250 LYS CA C sing N N 251 LYS CA CB sing N N 252 LYS CA HA sing N N 253 LYS C O doub N N 254 LYS C OXT sing N N 255 LYS CB CG sing N N 256 LYS CB HB2 sing N N 257 LYS CB HB3 sing N N 258 LYS CG CD sing N N 259 LYS CG HG2 sing N N 260 LYS CG HG3 sing N N 261 LYS CD CE sing N N 262 LYS CD HD2 sing N N 263 LYS CD HD3 sing N N 264 LYS CE NZ sing N N 265 LYS CE HE2 sing N N 266 LYS CE HE3 sing N N 267 LYS NZ HZ1 sing N N 268 LYS NZ HZ2 sing N N 269 LYS NZ HZ3 sing N N 270 LYS OXT HXT sing N N 271 MET N CA sing N N 272 MET N H sing N N 273 MET N H2 sing N N 274 MET CA C sing N N 275 MET CA CB sing N N 276 MET CA HA sing N N 277 MET C O doub N N 278 MET C OXT sing N N 279 MET CB CG sing N N 280 MET CB HB2 sing N N 281 MET CB HB3 sing N N 282 MET CG SD sing N N 283 MET CG HG2 sing N N 284 MET CG HG3 sing N N 285 MET SD CE sing N N 286 MET CE HE1 sing N N 287 MET CE HE2 sing N N 288 MET CE HE3 sing N N 289 MET OXT HXT sing N N 290 NO3 N O1 doub N N 291 NO3 N O2 sing N N 292 NO3 N O3 sing N N 293 PHE N CA sing N N 294 PHE N H sing N N 295 PHE N H2 sing N N 296 PHE CA C sing N N 297 PHE CA CB sing N N 298 PHE CA HA sing N N 299 PHE C O doub N N 300 PHE C OXT sing N N 301 PHE CB CG sing N N 302 PHE CB HB2 sing N N 303 PHE CB HB3 sing N N 304 PHE CG CD1 doub Y N 305 PHE CG CD2 sing Y N 306 PHE CD1 CE1 sing Y N 307 PHE CD1 HD1 sing N N 308 PHE CD2 CE2 doub Y N 309 PHE CD2 HD2 sing N N 310 PHE CE1 CZ doub Y N 311 PHE CE1 HE1 sing N N 312 PHE CE2 CZ sing Y N 313 PHE CE2 HE2 sing N N 314 PHE CZ HZ sing N N 315 PHE OXT HXT sing N N 316 PRO N CA sing N N 317 PRO N CD sing N N 318 PRO N H sing N N 319 PRO CA C sing N N 320 PRO CA CB sing N N 321 PRO CA HA sing N N 322 PRO C O doub N N 323 PRO C OXT sing N N 324 PRO CB CG sing N N 325 PRO CB HB2 sing N N 326 PRO CB HB3 sing N N 327 PRO CG CD sing N N 328 PRO CG HG2 sing N N 329 PRO CG HG3 sing N N 330 PRO CD HD2 sing N N 331 PRO CD HD3 sing N N 332 PRO OXT HXT sing N N 333 SER N CA sing N N 334 SER N H sing N N 335 SER N H2 sing N N 336 SER CA C sing N N 337 SER CA CB sing N N 338 SER CA HA sing N N 339 SER C O doub N N 340 SER C OXT sing N N 341 SER CB OG sing N N 342 SER CB HB2 sing N N 343 SER CB HB3 sing N N 344 SER OG HG sing N N 345 SER OXT HXT sing N N 346 THR N CA sing N N 347 THR N H sing N N 348 THR N H2 sing N N 349 THR CA C sing N N 350 THR CA CB sing N N 351 THR CA HA sing N N 352 THR C O doub N N 353 THR C OXT sing N N 354 THR CB OG1 sing N N 355 THR CB CG2 sing N N 356 THR CB HB sing N N 357 THR OG1 HG1 sing N N 358 THR CG2 HG21 sing N N 359 THR CG2 HG22 sing N N 360 THR CG2 HG23 sing N N 361 THR OXT HXT sing N N 362 TYR N CA sing N N 363 TYR N H sing N N 364 TYR N H2 sing N N 365 TYR CA C sing N N 366 TYR CA CB sing N N 367 TYR CA HA sing N N 368 TYR C O doub N N 369 TYR C OXT sing N N 370 TYR CB CG sing N N 371 TYR CB HB2 sing N N 372 TYR CB HB3 sing N N 373 TYR CG CD1 doub Y N 374 TYR CG CD2 sing Y N 375 TYR CD1 CE1 sing Y N 376 TYR CD1 HD1 sing N N 377 TYR CD2 CE2 doub Y N 378 TYR CD2 HD2 sing N N 379 TYR CE1 CZ doub Y N 380 TYR CE1 HE1 sing N N 381 TYR CE2 CZ sing Y N 382 TYR CE2 HE2 sing N N 383 TYR CZ OH sing N N 384 TYR OH HH sing N N 385 TYR OXT HXT sing N N 386 VAL N CA sing N N 387 VAL N H sing N N 388 VAL N H2 sing N N 389 VAL CA C sing N N 390 VAL CA CB sing N N 391 VAL CA HA sing N N 392 VAL C O doub N N 393 VAL C OXT sing N N 394 VAL CB CG1 sing N N 395 VAL CB CG2 sing N N 396 VAL CB HB sing N N 397 VAL CG1 HG11 sing N N 398 VAL CG1 HG12 sing N N 399 VAL CG1 HG13 sing N N 400 VAL CG2 HG21 sing N N 401 VAL CG2 HG22 sing N N 402 VAL CG2 HG23 sing N N 403 VAL OXT HXT sing N N 404 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4LC2 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5O5A _atom_sites.fract_transf_matrix[1][1] 0.016476 _atom_sites.fract_transf_matrix[1][2] 0.009513 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019025 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015862 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_