data_5OUN # _entry.id 5OUN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5OUN pdb_00005oun 10.2210/pdb5oun/pdb WWPDB D_1200006376 ? ? BMRB 34173 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'NMR solution structure of the external DII domain of Rvb2 from Saccharomyces cerevisiae' _pdbx_database_related.db_id 34173 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5OUN _pdbx_database_status.recvd_initial_deposition_date 2017-08-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Rouillon, C.' 1 ? 'Bragantini, B.' 2 ? 'Charpentier, B.' 3 ? 'Manival, X.' 4 ? 'Quinternet, M.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country NE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Biomol NMR Assign' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1874-270X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 12 _citation.language ? _citation.page_first 243 _citation.page_last 247 _citation.title 'NMR assignment and solution structure of the external DII domain of the yeast Rvb2 protein.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1007/s12104-018-9816-5 _citation.pdbx_database_id_PubMed 29569106 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bragantini, B.' 1 ? primary 'Rouillon, C.' 2 ? primary 'Charpentier, B.' 3 ? primary 'Manival, X.' 4 ? primary 'Quinternet, M.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'RuvB-like protein 2' _entity.formula_weight 11845.531 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 3.6.4.12 _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RUVBL2,TIP49-homology protein 2,TIP49b homolog' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPHMETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLTKEKVLAGDVISIDKASGKITKLGRSFA RSRDYDAMGADTRFVQCPEGELQKRKT ; _entity_poly.pdbx_seq_one_letter_code_can ;GPHMETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLTKEKVLAGDVISIDKASGKITKLGRSFA RSRDYDAMGADTRFVQCPEGELQKRKT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 HIS n 1 4 MET n 1 5 GLU n 1 6 THR n 1 7 GLU n 1 8 LEU n 1 9 ILE n 1 10 GLU n 1 11 GLY n 1 12 GLU n 1 13 VAL n 1 14 VAL n 1 15 GLU n 1 16 ILE n 1 17 GLN n 1 18 ILE n 1 19 ASP n 1 20 ARG n 1 21 SER n 1 22 ILE n 1 23 THR n 1 24 GLY n 1 25 GLY n 1 26 HIS n 1 27 LYS n 1 28 GLN n 1 29 GLY n 1 30 LYS n 1 31 LEU n 1 32 THR n 1 33 ILE n 1 34 LYS n 1 35 THR n 1 36 THR n 1 37 ASP n 1 38 MET n 1 39 GLU n 1 40 THR n 1 41 ILE n 1 42 TYR n 1 43 GLU n 1 44 LEU n 1 45 GLY n 1 46 ASN n 1 47 LYS n 1 48 MET n 1 49 ILE n 1 50 ASP n 1 51 GLY n 1 52 LEU n 1 53 THR n 1 54 LYS n 1 55 GLU n 1 56 LYS n 1 57 VAL n 1 58 LEU n 1 59 ALA n 1 60 GLY n 1 61 ASP n 1 62 VAL n 1 63 ILE n 1 64 SER n 1 65 ILE n 1 66 ASP n 1 67 LYS n 1 68 ALA n 1 69 SER n 1 70 GLY n 1 71 LYS n 1 72 ILE n 1 73 THR n 1 74 LYS n 1 75 LEU n 1 76 GLY n 1 77 ARG n 1 78 SER n 1 79 PHE n 1 80 ALA n 1 81 ARG n 1 82 SER n 1 83 ARG n 1 84 ASP n 1 85 TYR n 1 86 ASP n 1 87 ALA n 1 88 MET n 1 89 GLY n 1 90 ALA n 1 91 ASP n 1 92 THR n 1 93 ARG n 1 94 PHE n 1 95 VAL n 1 96 GLN n 1 97 CYS n 1 98 PRO n 1 99 GLU n 1 100 GLY n 1 101 GLU n 1 102 LEU n 1 103 GLN n 1 104 LYS n 1 105 ARG n 1 106 LYS n 1 107 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 107 _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'RVB2, TIH2, TIP49B, YPL235W, P1060' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RUVB2_YEAST _struct_ref.pdbx_db_accession Q12464 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLTKEKVLAGDVISIDKASGKITKLGRSFARSRD YDAMGADTRFVQCPEGELQKRKT ; _struct_ref.pdbx_align_begin 132 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5OUN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 107 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q12464 _struct_ref_seq.db_align_beg 132 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 234 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 132 _struct_ref_seq.pdbx_auth_seq_align_end 234 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5OUN GLY A 1 ? UNP Q12464 ? ? 'expression tag' 128 1 1 5OUN PRO A 2 ? UNP Q12464 ? ? 'expression tag' 129 2 1 5OUN HIS A 3 ? UNP Q12464 ? ? 'expression tag' 130 3 1 5OUN MET A 4 ? UNP Q12464 ? ? 'expression tag' 131 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-15N HSQC' 1 isotropic 2 1 1 '2D 1H-13C HSQC aliphatic' 1 isotropic 3 1 1 '2D 1H-13C HSQC aromatic' 1 isotropic 4 1 1 '3D HNCA' 1 isotropic 5 1 1 '3D CBCA(CO)NH' 1 isotropic 6 1 1 '3D HNCACB' 1 isotropic 7 1 1 '3D HNCO' 1 isotropic 8 1 1 '3D HNHA' 1 isotropic 11 1 1 '3D HBHA(CO)NH' 1 isotropic 10 1 1 '3D HCCH-TOCSY' 1 isotropic 9 1 1 '3D H(CCO)NH' 1 isotropic 12 1 1 '3D C(CO)NH' 1 isotropic 13 1 1 '2D 1H-1H NOESY' 1 isotropic 14 1 1 '3D 1H-13C NOESY' 1 isotropic 15 1 1 '3D 1H-15N NOESY' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.4 _pdbx_nmr_exptl_sample_conditions.ionic_strength 150 _pdbx_nmr_exptl_sample_conditions.details ;NaPi 10 mM NaCl 150 mM TCEP 0.5 mM ; _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1 mM [U-13C; U-15N] Rvb2DII, 95% H2O/5% D2O' _pdbx_nmr_sample_details.solvent_system '95% H2O/5% D2O' _pdbx_nmr_sample_details.label sample_1 _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE III' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 5OUN _pdbx_nmr_refine.method 'DGSA-distance geometry simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 4 # _pdbx_nmr_ensemble.entry_id 5OUN _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5OUN _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 3 collection TopSpin 3.2 'Bruker Biospin' 1 'chemical shift assignment' CARA ? 'Keller and Wuthrich' 2 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 4 refinement CNS ? 'Brunger, Adams, Clore, Gros, Nilges and Read' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5OUN _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5OUN _struct.title 'NMR solution structure of the external DII domain of Rvb2 from Saccharomyces cerevisiae' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5OUN _struct_keywords.text 'ATPase Chaperon Rvb1 Rvb2 RuvBL1 RuvBL2 NMR snoRNP, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id GLY _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 45 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id LYS _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 56 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id GLY _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 172 _struct_conf.end_auth_comp_id LYS _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 183 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 39 ? LEU A 44 ? GLU A 166 LEU A 171 AA1 2 GLY A 29 ? LYS A 34 ? GLY A 156 LYS A 161 AA1 3 LEU A 8 ? ILE A 18 ? LEU A 135 ILE A 145 AA1 4 VAL A 62 ? ASP A 66 ? VAL A 189 ASP A 193 AA1 5 ILE A 72 ? LYS A 74 ? ILE A 199 LYS A 201 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O TYR A 42 ? O TYR A 169 N LEU A 31 ? N LEU A 158 AA1 2 3 O LYS A 34 ? O LYS A 161 N GLU A 12 ? N GLU A 139 AA1 3 4 N ILE A 9 ? N ILE A 136 O ILE A 65 ? O ILE A 192 AA1 4 5 N SER A 64 ? N SER A 191 O THR A 73 ? O THR A 200 # _atom_sites.entry_id 5OUN _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 128 128 GLY GLY A . n A 1 2 PRO 2 129 129 PRO PRO A . n A 1 3 HIS 3 130 130 HIS HIS A . n A 1 4 MET 4 131 131 MET MET A . n A 1 5 GLU 5 132 132 GLU GLU A . n A 1 6 THR 6 133 133 THR THR A . n A 1 7 GLU 7 134 134 GLU GLU A . n A 1 8 LEU 8 135 135 LEU LEU A . n A 1 9 ILE 9 136 136 ILE ILE A . n A 1 10 GLU 10 137 137 GLU GLU A . n A 1 11 GLY 11 138 138 GLY GLY A . n A 1 12 GLU 12 139 139 GLU GLU A . n A 1 13 VAL 13 140 140 VAL VAL A . n A 1 14 VAL 14 141 141 VAL VAL A . n A 1 15 GLU 15 142 142 GLU GLU A . n A 1 16 ILE 16 143 143 ILE ILE A . n A 1 17 GLN 17 144 144 GLN GLN A . n A 1 18 ILE 18 145 145 ILE ILE A . n A 1 19 ASP 19 146 146 ASP ASP A . n A 1 20 ARG 20 147 147 ARG ARG A . n A 1 21 SER 21 148 148 SER SER A . n A 1 22 ILE 22 149 149 ILE ILE A . n A 1 23 THR 23 150 150 THR THR A . n A 1 24 GLY 24 151 151 GLY GLY A . n A 1 25 GLY 25 152 152 GLY GLY A . n A 1 26 HIS 26 153 153 HIS HIS A . n A 1 27 LYS 27 154 154 LYS LYS A . n A 1 28 GLN 28 155 155 GLN GLN A . n A 1 29 GLY 29 156 156 GLY GLY A . n A 1 30 LYS 30 157 157 LYS LYS A . n A 1 31 LEU 31 158 158 LEU LEU A . n A 1 32 THR 32 159 159 THR THR A . n A 1 33 ILE 33 160 160 ILE ILE A . n A 1 34 LYS 34 161 161 LYS LYS A . n A 1 35 THR 35 162 162 THR THR A . n A 1 36 THR 36 163 163 THR THR A . n A 1 37 ASP 37 164 164 ASP ASP A . n A 1 38 MET 38 165 165 MET MET A . n A 1 39 GLU 39 166 166 GLU GLU A . n A 1 40 THR 40 167 167 THR THR A . n A 1 41 ILE 41 168 168 ILE ILE A . n A 1 42 TYR 42 169 169 TYR TYR A . n A 1 43 GLU 43 170 170 GLU GLU A . n A 1 44 LEU 44 171 171 LEU LEU A . n A 1 45 GLY 45 172 172 GLY GLY A . n A 1 46 ASN 46 173 173 ASN ASN A . n A 1 47 LYS 47 174 174 LYS LYS A . n A 1 48 MET 48 175 175 MET MET A . n A 1 49 ILE 49 176 176 ILE ILE A . n A 1 50 ASP 50 177 177 ASP ASP A . n A 1 51 GLY 51 178 178 GLY GLY A . n A 1 52 LEU 52 179 179 LEU LEU A . n A 1 53 THR 53 180 180 THR THR A . n A 1 54 LYS 54 181 181 LYS LYS A . n A 1 55 GLU 55 182 182 GLU GLU A . n A 1 56 LYS 56 183 183 LYS LYS A . n A 1 57 VAL 57 184 184 VAL VAL A . n A 1 58 LEU 58 185 185 LEU LEU A . n A 1 59 ALA 59 186 186 ALA ALA A . n A 1 60 GLY 60 187 187 GLY GLY A . n A 1 61 ASP 61 188 188 ASP ASP A . n A 1 62 VAL 62 189 189 VAL VAL A . n A 1 63 ILE 63 190 190 ILE ILE A . n A 1 64 SER 64 191 191 SER SER A . n A 1 65 ILE 65 192 192 ILE ILE A . n A 1 66 ASP 66 193 193 ASP ASP A . n A 1 67 LYS 67 194 194 LYS LYS A . n A 1 68 ALA 68 195 195 ALA ALA A . n A 1 69 SER 69 196 196 SER SER A . n A 1 70 GLY 70 197 197 GLY GLY A . n A 1 71 LYS 71 198 198 LYS LYS A . n A 1 72 ILE 72 199 199 ILE ILE A . n A 1 73 THR 73 200 200 THR THR A . n A 1 74 LYS 74 201 201 LYS LYS A . n A 1 75 LEU 75 202 202 LEU LEU A . n A 1 76 GLY 76 203 203 GLY GLY A . n A 1 77 ARG 77 204 204 ARG ARG A . n A 1 78 SER 78 205 205 SER SER A . n A 1 79 PHE 79 206 206 PHE PHE A . n A 1 80 ALA 80 207 207 ALA ALA A . n A 1 81 ARG 81 208 208 ARG ARG A . n A 1 82 SER 82 209 209 SER SER A . n A 1 83 ARG 83 210 210 ARG ARG A . n A 1 84 ASP 84 211 211 ASP ASP A . n A 1 85 TYR 85 212 212 TYR TYR A . n A 1 86 ASP 86 213 213 ASP ASP A . n A 1 87 ALA 87 214 214 ALA ALA A . n A 1 88 MET 88 215 215 MET MET A . n A 1 89 GLY 89 216 216 GLY GLY A . n A 1 90 ALA 90 217 217 ALA ALA A . n A 1 91 ASP 91 218 218 ASP ASP A . n A 1 92 THR 92 219 219 THR THR A . n A 1 93 ARG 93 220 220 ARG ARG A . n A 1 94 PHE 94 221 221 PHE PHE A . n A 1 95 VAL 95 222 222 VAL VAL A . n A 1 96 GLN 96 223 223 GLN GLN A . n A 1 97 CYS 97 224 224 CYS CYS A . n A 1 98 PRO 98 225 225 PRO PRO A . n A 1 99 GLU 99 226 226 GLU GLU A . n A 1 100 GLY 100 227 227 GLY GLY A . n A 1 101 GLU 101 228 228 GLU GLU A . n A 1 102 LEU 102 229 229 LEU LEU A . n A 1 103 GLN 103 230 230 GLN GLN A . n A 1 104 LYS 104 231 231 LYS LYS A . n A 1 105 ARG 105 232 232 ARG ARG A . n A 1 106 LYS 106 233 233 LYS LYS A . n A 1 107 THR 107 234 234 THR THR A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 8670 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-03-28 2 'Structure model' 1 1 2018-04-04 3 'Structure model' 1 2 2018-09-19 4 'Structure model' 1 3 2019-05-08 5 'Structure model' 1 4 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Data collection' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 4 'Structure model' pdbx_nmr_software 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_database_status 6 5 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_abbrev' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 3 'Structure model' '_citation.journal_volume' 5 3 'Structure model' '_citation.page_first' 6 3 'Structure model' '_citation.page_last' 7 4 'Structure model' '_pdbx_nmr_software.name' 8 5 'Structure model' '_database_2.pdbx_DOI' 9 5 'Structure model' '_database_2.pdbx_database_accession' 10 5 'Structure model' '_pdbx_database_status.status_code_nmr_data' 11 5 'Structure model' '_pdbx_nmr_spectrometer.model' # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component Rvb2DII _pdbx_nmr_exptl_sample.concentration 1 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling '[U-13C; U-15N]' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 OD1 A ASP 193 ? ? H A SER 196 ? ? 1.60 2 10 OD1 A ASP 146 ? ? HG A SER 148 ? ? 1.59 3 12 OD1 A ASP 193 ? ? H A SER 196 ? ? 1.60 4 12 HG1 A THR 162 ? ? O A MET 165 ? ? 1.60 5 19 O A GLN 144 ? ? H A LYS 157 ? ? 1.59 6 19 HG1 A THR 162 ? ? O A MET 165 ? ? 1.60 7 20 HG1 A THR 162 ? ? O A MET 165 ? ? 1.60 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 130 ? ? 72.93 -53.40 2 1 HIS A 153 ? ? -152.64 84.20 3 1 ARG A 204 ? ? -76.44 -70.19 4 1 PHE A 206 ? ? -123.91 -161.92 5 1 ALA A 214 ? ? -92.98 53.25 6 1 THR A 219 ? ? -81.21 42.36 7 1 ARG A 220 ? ? -116.60 61.41 8 1 PRO A 225 ? ? -59.91 98.62 9 1 GLN A 230 ? ? 68.14 133.87 10 1 LYS A 233 ? ? 70.15 128.48 11 2 THR A 150 ? ? -38.72 -36.56 12 2 ASP A 211 ? ? -77.99 41.40 13 2 TYR A 212 ? ? -159.28 37.25 14 2 ASP A 213 ? ? -82.13 41.34 15 2 ARG A 220 ? ? -90.03 57.39 16 2 GLN A 223 ? ? -56.03 107.16 17 2 LYS A 231 ? ? -118.03 71.17 18 3 MET A 131 ? ? 65.63 125.81 19 3 GLU A 132 ? ? 58.19 -153.57 20 3 SER A 205 ? ? -99.52 34.75 21 3 ALA A 207 ? ? -117.91 79.79 22 3 ARG A 208 ? ? -111.49 -162.76 23 3 ASP A 211 ? ? -96.37 34.17 24 3 TYR A 212 ? ? 71.70 -52.41 25 3 ASP A 213 ? ? 57.90 72.13 26 3 CYS A 224 ? ? -173.49 -54.76 27 3 GLU A 226 ? ? 56.80 89.16 28 4 MET A 131 ? ? 56.85 83.54 29 4 THR A 150 ? ? 71.12 -51.27 30 4 HIS A 153 ? ? -144.23 54.99 31 4 LYS A 183 ? ? 61.82 60.66 32 4 SER A 205 ? ? -49.09 152.52 33 4 ALA A 207 ? ? 62.92 66.94 34 4 ARG A 208 ? ? 57.55 114.43 35 4 ASP A 213 ? ? 69.59 76.49 36 4 THR A 219 ? ? -90.54 35.54 37 4 LYS A 231 ? ? -80.91 45.39 38 4 ARG A 232 ? ? -93.97 34.39 39 5 SER A 209 ? ? 73.08 126.47 40 5 TYR A 212 ? ? -132.04 -49.52 41 5 ASP A 213 ? ? 65.16 92.28 42 5 ARG A 220 ? ? -87.99 49.66 43 5 VAL A 222 ? ? -172.57 135.86 44 5 LYS A 231 ? ? -111.71 58.06 45 5 LYS A 233 ? ? 52.50 74.83 46 6 PRO A 129 ? ? -68.74 91.71 47 6 HIS A 130 ? ? 61.02 86.49 48 6 LEU A 202 ? ? -104.69 -60.93 49 6 ARG A 204 ? ? -139.33 -75.58 50 6 ASP A 213 ? ? -122.77 -51.38 51 6 ALA A 214 ? ? 68.35 81.09 52 6 ALA A 217 ? ? -92.85 45.03 53 6 GLN A 223 ? ? -93.47 40.78 54 6 ARG A 232 ? ? 65.50 101.93 55 7 PRO A 129 ? ? -60.30 99.69 56 7 HIS A 153 ? ? -66.89 97.02 57 7 ARG A 204 ? ? -133.95 -64.88 58 7 ARG A 210 ? ? 66.81 132.25 59 7 TYR A 212 ? ? -96.81 -71.19 60 7 ALA A 214 ? ? -141.48 31.57 61 7 ALA A 217 ? ? 58.09 72.17 62 7 GLN A 223 ? ? 65.72 -84.49 63 7 PRO A 225 ? ? -68.90 61.08 64 7 ARG A 232 ? ? 57.78 -163.09 65 8 HIS A 130 ? ? -125.89 -168.59 66 8 SER A 205 ? ? -177.14 117.25 67 8 PHE A 206 ? ? -114.16 -150.20 68 8 ALA A 207 ? ? -61.77 95.82 69 8 ASP A 213 ? ? 59.26 70.69 70 8 ALA A 214 ? ? -143.26 53.57 71 8 THR A 219 ? ? -165.82 42.85 72 9 HIS A 130 ? ? -131.01 -72.94 73 9 GLU A 132 ? ? 38.45 44.82 74 9 ARG A 204 ? ? -176.36 -45.09 75 9 SER A 209 ? ? 60.76 -162.61 76 9 CYS A 224 ? ? 61.66 85.98 77 9 GLN A 230 ? ? -85.74 48.06 78 10 ARG A 204 ? ? -130.12 -68.87 79 10 ALA A 207 ? ? -69.86 80.51 80 10 ASP A 213 ? ? 62.11 76.64 81 10 THR A 219 ? ? -63.67 73.24 82 10 ARG A 220 ? ? -94.29 39.30 83 10 VAL A 222 ? ? 175.22 148.50 84 10 LYS A 233 ? ? -85.87 49.03 85 11 PRO A 129 ? ? -66.93 76.46 86 11 HIS A 153 ? ? 57.34 70.53 87 11 ALA A 207 ? ? 70.51 122.66 88 11 TYR A 212 ? ? -124.51 -86.06 89 11 ASP A 213 ? ? 54.97 79.22 90 11 ALA A 217 ? ? -84.02 43.53 91 11 THR A 219 ? ? -103.64 61.97 92 11 GLN A 230 ? ? -114.86 72.45 93 11 LYS A 231 ? ? -151.56 -131.84 94 12 HIS A 130 ? ? 56.39 85.05 95 12 SER A 205 ? ? 57.33 72.39 96 12 PHE A 206 ? ? 48.08 -172.60 97 12 MET A 215 ? ? -88.47 48.10 98 12 THR A 219 ? ? -160.54 43.97 99 12 VAL A 222 ? ? 61.63 77.66 100 12 LYS A 231 ? ? -163.18 104.89 101 13 TYR A 212 ? ? 73.44 -9.34 102 13 GLU A 228 ? ? -81.04 41.10 103 14 PRO A 129 ? ? -65.79 -70.38 104 14 GLU A 132 ? ? 46.22 -157.93 105 14 THR A 150 ? ? -89.70 -74.34 106 14 ARG A 204 ? ? 66.54 -66.87 107 14 ARG A 208 ? ? -78.59 48.31 108 14 TYR A 212 ? ? -179.70 -63.17 109 14 ALA A 214 ? ? -142.96 25.23 110 14 ALA A 217 ? ? 52.84 74.32 111 14 THR A 219 ? ? -91.64 32.43 112 14 ARG A 220 ? ? -91.13 34.57 113 14 GLN A 223 ? ? -106.48 46.70 114 14 PRO A 225 ? ? -61.61 99.82 115 14 GLU A 228 ? ? -91.26 51.22 116 15 HIS A 153 ? ? 77.61 101.53 117 15 SER A 205 ? ? 50.58 71.91 118 15 ALA A 207 ? ? -177.91 -32.47 119 15 TYR A 212 ? ? -68.78 -70.77 120 15 ASP A 213 ? ? 59.18 86.03 121 15 THR A 219 ? ? -165.95 109.73 122 15 VAL A 222 ? ? 58.86 71.45 123 16 ARG A 147 ? ? -96.02 32.09 124 16 ALA A 207 ? ? -94.73 -135.71 125 16 SER A 209 ? ? 64.89 113.57 126 16 GLN A 230 ? ? -84.82 45.36 127 16 LYS A 233 ? ? 72.16 140.25 128 17 ARG A 204 ? ? 65.28 179.18 129 17 SER A 205 ? ? 51.05 84.54 130 17 ALA A 214 ? ? 58.53 78.45 131 17 ALA A 217 ? ? -99.64 41.84 132 17 ARG A 232 ? ? -92.12 31.05 133 18 ARG A 220 ? ? 54.73 74.80 134 18 CYS A 224 ? ? 49.75 72.72 135 19 HIS A 153 ? ? 70.39 105.63 136 19 PHE A 206 ? ? 59.92 -174.79 137 19 ALA A 214 ? ? -153.94 56.66 138 19 ASP A 218 ? ? -96.57 51.00 139 19 ARG A 220 ? ? -113.66 57.24 140 19 PHE A 221 ? ? -97.53 53.49 141 19 LYS A 231 ? ? -100.14 68.30 142 20 ALA A 207 ? ? -101.03 44.14 143 20 ARG A 208 ? ? 55.62 89.68 144 20 ALA A 214 ? ? 67.07 81.00 145 20 ARG A 220 ? ? -140.25 49.36 146 20 VAL A 222 ? ? 39.50 67.50 # _pdbx_audit_support.funding_organization 'French National Research Agency' _pdbx_audit_support.country France _pdbx_audit_support.grant_number ANR-16-CE11-0032-02 _pdbx_audit_support.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #