data_5QUD # _entry.id 5QUD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5QUD pdb_00005qud 10.2210/pdb5qud/pdb WWPDB D_1001402418 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-03-03 2 'Structure model' 1 1 2021-05-12 3 'Structure model' 1 2 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_deposit_group 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_deposit_group.group_type' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.entry_id 5QUD _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.recvd_initial_deposition_date 2020-01-27 _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Marsh, M.' 1 'Hyvonen, M.' 2 # _citation.id primary _citation.title 'Optimisation of crystal forms for structure-guided drug discovery' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.identifier_ORCID _citation_author.ordinal primary 'Brear, P.B.' ? 1 primary 'Fischer, G.' ? 2 primary 'Rocaboy, R.' ? 3 primary 'Marsh, M.' ? 4 primary 'Rossmann, M.' ? 5 primary 'Pantelejevs, T.' ? 6 primary 'Wagstaff, J.' ? 7 primary 'Blaszczyk, B.K.' ? 8 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man RadA 25287.906 1 ? ? ? ? 2 non-polymer syn naphthalene-2,3-diol 160.169 1 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 4 water nat water 18.015 256 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MATIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVMWIDTENTFRPERIREIA QNRGLDPDEVLKHIAYARAFNSNHQMLLVQQAEDMIKELLNTDRPVKLLIVDSLTSHFRSEYIGALAERQQKLAKHLADL HRLANLYDIAVFVTNQVQANGGHILAHSATLRVYLRKGKGGKRIARLIDAPHLPEGEAVFSITEKGIED ; _entity_poly.pdbx_seq_one_letter_code_can ;MATIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVMWIDTENTFRPERIREIA QNRGLDPDEVLKHIAYARAFNSNHQMLLVQQAEDMIKELLNTDRPVKLLIVDSLTSHFRSEYIGALAERQQKLAKHLADL HRLANLYDIAVFVTNQVQANGGHILAHSATLRVYLRKGKGGKRIARLIDAPHLPEGEAVFSITEKGIED ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 naphthalene-2,3-diol D48 3 'PHOSPHATE ION' PO4 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 THR n 1 4 ILE n 1 5 GLY n 1 6 ARG n 1 7 ILE n 1 8 SER n 1 9 THR n 1 10 GLY n 1 11 SER n 1 12 LYS n 1 13 SER n 1 14 LEU n 1 15 ASP n 1 16 LYS n 1 17 LEU n 1 18 LEU n 1 19 GLY n 1 20 GLY n 1 21 GLY n 1 22 ILE n 1 23 GLU n 1 24 THR n 1 25 GLN n 1 26 ALA n 1 27 ILE n 1 28 THR n 1 29 GLU n 1 30 VAL n 1 31 PHE n 1 32 GLY n 1 33 GLU n 1 34 PHE n 1 35 GLY n 1 36 SER n 1 37 GLY n 1 38 LYS n 1 39 THR n 1 40 GLN n 1 41 LEU n 1 42 ALA n 1 43 HIS n 1 44 THR n 1 45 LEU n 1 46 ALA n 1 47 VAL n 1 48 MET n 1 49 VAL n 1 50 GLN n 1 51 LEU n 1 52 PRO n 1 53 PRO n 1 54 GLU n 1 55 GLU n 1 56 GLY n 1 57 GLY n 1 58 LEU n 1 59 ASN n 1 60 GLY n 1 61 SER n 1 62 VAL n 1 63 MET n 1 64 TRP n 1 65 ILE n 1 66 ASP n 1 67 THR n 1 68 GLU n 1 69 ASN n 1 70 THR n 1 71 PHE n 1 72 ARG n 1 73 PRO n 1 74 GLU n 1 75 ARG n 1 76 ILE n 1 77 ARG n 1 78 GLU n 1 79 ILE n 1 80 ALA n 1 81 GLN n 1 82 ASN n 1 83 ARG n 1 84 GLY n 1 85 LEU n 1 86 ASP n 1 87 PRO n 1 88 ASP n 1 89 GLU n 1 90 VAL n 1 91 LEU n 1 92 LYS n 1 93 HIS n 1 94 ILE n 1 95 ALA n 1 96 TYR n 1 97 ALA n 1 98 ARG n 1 99 ALA n 1 100 PHE n 1 101 ASN n 1 102 SER n 1 103 ASN n 1 104 HIS n 1 105 GLN n 1 106 MET n 1 107 LEU n 1 108 LEU n 1 109 VAL n 1 110 GLN n 1 111 GLN n 1 112 ALA n 1 113 GLU n 1 114 ASP n 1 115 MET n 1 116 ILE n 1 117 LYS n 1 118 GLU n 1 119 LEU n 1 120 LEU n 1 121 ASN n 1 122 THR n 1 123 ASP n 1 124 ARG n 1 125 PRO n 1 126 VAL n 1 127 LYS n 1 128 LEU n 1 129 LEU n 1 130 ILE n 1 131 VAL n 1 132 ASP n 1 133 SER n 1 134 LEU n 1 135 THR n 1 136 SER n 1 137 HIS n 1 138 PHE n 1 139 ARG n 1 140 SER n 1 141 GLU n 1 142 TYR n 1 143 ILE n 1 144 GLY n 1 145 ALA n 1 146 LEU n 1 147 ALA n 1 148 GLU n 1 149 ARG n 1 150 GLN n 1 151 GLN n 1 152 LYS n 1 153 LEU n 1 154 ALA n 1 155 LYS n 1 156 HIS n 1 157 LEU n 1 158 ALA n 1 159 ASP n 1 160 LEU n 1 161 HIS n 1 162 ARG n 1 163 LEU n 1 164 ALA n 1 165 ASN n 1 166 LEU n 1 167 TYR n 1 168 ASP n 1 169 ILE n 1 170 ALA n 1 171 VAL n 1 172 PHE n 1 173 VAL n 1 174 THR n 1 175 ASN n 1 176 GLN n 1 177 VAL n 1 178 GLN n 1 179 ALA n 1 180 ASN n 1 181 GLY n 1 182 GLY n 1 183 HIS n 1 184 ILE n 1 185 LEU n 1 186 ALA n 1 187 HIS n 1 188 SER n 1 189 ALA n 1 190 THR n 1 191 LEU n 1 192 ARG n 1 193 VAL n 1 194 TYR n 1 195 LEU n 1 196 ARG n 1 197 LYS n 1 198 GLY n 1 199 LYS n 1 200 GLY n 1 201 GLY n 1 202 LYS n 1 203 ARG n 1 204 ILE n 1 205 ALA n 1 206 ARG n 1 207 LEU n 1 208 ILE n 1 209 ASP n 1 210 ALA n 1 211 PRO n 1 212 HIS n 1 213 LEU n 1 214 PRO n 1 215 GLU n 1 216 GLY n 1 217 GLU n 1 218 ALA n 1 219 VAL n 1 220 PHE n 1 221 SER n 1 222 ILE n 1 223 THR n 1 224 GLU n 1 225 LYS n 1 226 GLY n 1 227 ILE n 1 228 GLU n 1 229 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 229 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pyrococcus furiosus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2261 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pBAT4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 D48 non-polymer . naphthalene-2,3-diol ? 'C10 H8 O2' 160.169 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 107 ? ? ? A . n A 1 2 ALA 2 108 108 ALA ALA A . n A 1 3 THR 3 109 109 THR THR A . n A 1 4 ILE 4 110 110 ILE ILE A . n A 1 5 GLY 5 111 111 GLY GLY A . n A 1 6 ARG 6 112 112 ARG ARG A . n A 1 7 ILE 7 113 113 ILE ILE A . n A 1 8 SER 8 114 114 SER SER A . n A 1 9 THR 9 115 115 THR THR A . n A 1 10 GLY 10 116 116 GLY GLY A . n A 1 11 SER 11 117 117 SER SER A . n A 1 12 LYS 12 118 118 LYS LYS A . n A 1 13 SER 13 119 119 SER SER A . n A 1 14 LEU 14 120 120 LEU LEU A . n A 1 15 ASP 15 121 121 ASP ASP A . n A 1 16 LYS 16 122 122 LYS LYS A . n A 1 17 LEU 17 123 123 LEU LEU A . n A 1 18 LEU 18 124 124 LEU LEU A . n A 1 19 GLY 19 125 125 GLY GLY A . n A 1 20 GLY 20 126 126 GLY GLY A . n A 1 21 GLY 21 127 127 GLY GLY A . n A 1 22 ILE 22 128 128 ILE ILE A . n A 1 23 GLU 23 129 129 GLU GLU A . n A 1 24 THR 24 130 130 THR THR A . n A 1 25 GLN 25 131 131 GLN GLN A . n A 1 26 ALA 26 132 132 ALA ALA A . n A 1 27 ILE 27 133 133 ILE ILE A . n A 1 28 THR 28 134 134 THR THR A . n A 1 29 GLU 29 135 135 GLU GLU A . n A 1 30 VAL 30 136 136 VAL VAL A . n A 1 31 PHE 31 137 137 PHE PHE A . n A 1 32 GLY 32 138 138 GLY GLY A . n A 1 33 GLU 33 139 139 GLU GLU A . n A 1 34 PHE 34 140 140 PHE PHE A . n A 1 35 GLY 35 141 141 GLY GLY A . n A 1 36 SER 36 142 142 SER SER A . n A 1 37 GLY 37 143 143 GLY GLY A . n A 1 38 LYS 38 144 144 LYS LYS A . n A 1 39 THR 39 145 145 THR THR A . n A 1 40 GLN 40 146 146 GLN GLN A . n A 1 41 LEU 41 147 147 LEU LEU A . n A 1 42 ALA 42 148 148 ALA ALA A . n A 1 43 HIS 43 149 149 HIS HIS A . n A 1 44 THR 44 150 150 THR THR A . n A 1 45 LEU 45 151 151 LEU LEU A . n A 1 46 ALA 46 152 152 ALA ALA A . n A 1 47 VAL 47 153 153 VAL VAL A . n A 1 48 MET 48 154 154 MET MET A . n A 1 49 VAL 49 155 155 VAL VAL A . n A 1 50 GLN 50 156 156 GLN GLN A . n A 1 51 LEU 51 157 157 LEU LEU A . n A 1 52 PRO 52 158 158 PRO PRO A . n A 1 53 PRO 53 159 159 PRO PRO A . n A 1 54 GLU 54 160 160 GLU GLU A . n A 1 55 GLU 55 161 161 GLU GLU A . n A 1 56 GLY 56 162 162 GLY GLY A . n A 1 57 GLY 57 163 163 GLY GLY A . n A 1 58 LEU 58 164 164 LEU LEU A . n A 1 59 ASN 59 165 165 ASN ASN A . n A 1 60 GLY 60 166 166 GLY GLY A . n A 1 61 SER 61 167 167 SER SER A . n A 1 62 VAL 62 168 168 VAL VAL A . n A 1 63 MET 63 169 169 MET MET A . n A 1 64 TRP 64 170 170 TRP TRP A . n A 1 65 ILE 65 171 171 ILE ILE A . n A 1 66 ASP 66 172 172 ASP ASP A . n A 1 67 THR 67 173 173 THR THR A . n A 1 68 GLU 68 174 174 GLU GLU A . n A 1 69 ASN 69 175 175 ASN ASN A . n A 1 70 THR 70 176 176 THR THR A . n A 1 71 PHE 71 177 177 PHE PHE A . n A 1 72 ARG 72 178 178 ARG ARG A . n A 1 73 PRO 73 179 179 PRO PRO A . n A 1 74 GLU 74 180 180 GLU GLU A . n A 1 75 ARG 75 181 181 ARG ARG A . n A 1 76 ILE 76 182 182 ILE ILE A . n A 1 77 ARG 77 183 183 ARG ARG A . n A 1 78 GLU 78 184 184 GLU GLU A . n A 1 79 ILE 79 185 185 ILE ILE A . n A 1 80 ALA 80 186 186 ALA ALA A . n A 1 81 GLN 81 187 187 GLN GLN A . n A 1 82 ASN 82 188 188 ASN ASN A . n A 1 83 ARG 83 189 189 ARG ARG A . n A 1 84 GLY 84 190 190 GLY GLY A . n A 1 85 LEU 85 191 191 LEU LEU A . n A 1 86 ASP 86 192 192 ASP ASP A . n A 1 87 PRO 87 193 193 PRO PRO A . n A 1 88 ASP 88 194 194 ASP ASP A . n A 1 89 GLU 89 195 195 GLU GLU A . n A 1 90 VAL 90 196 196 VAL VAL A . n A 1 91 LEU 91 197 197 LEU LEU A . n A 1 92 LYS 92 198 198 LYS LYS A . n A 1 93 HIS 93 199 199 HIS HIS A . n A 1 94 ILE 94 200 200 ILE ILE A . n A 1 95 ALA 95 201 201 ALA ALA A . n A 1 96 TYR 96 202 202 TYR TYR A . n A 1 97 ALA 97 203 203 ALA ALA A . n A 1 98 ARG 98 204 204 ARG ARG A . n A 1 99 ALA 99 205 205 ALA ALA A . n A 1 100 PHE 100 206 206 PHE PHE A . n A 1 101 ASN 101 207 207 ASN ASN A . n A 1 102 SER 102 208 208 SER SER A . n A 1 103 ASN 103 209 209 ASN ASN A . n A 1 104 HIS 104 210 210 HIS HIS A . n A 1 105 GLN 105 211 211 GLN GLN A . n A 1 106 MET 106 212 212 MET MET A . n A 1 107 LEU 107 213 213 LEU LEU A . n A 1 108 LEU 108 214 214 LEU LEU A . n A 1 109 VAL 109 215 215 VAL VAL A . n A 1 110 GLN 110 216 216 GLN GLN A . n A 1 111 GLN 111 217 217 GLN GLN A . n A 1 112 ALA 112 218 218 ALA ALA A . n A 1 113 GLU 113 219 219 GLU GLU A . n A 1 114 ASP 114 220 220 ASP ASP A . n A 1 115 MET 115 221 221 MET MET A . n A 1 116 ILE 116 222 222 ILE ILE A . n A 1 117 LYS 117 223 223 LYS LYS A . n A 1 118 GLU 118 224 224 GLU GLU A . n A 1 119 LEU 119 225 225 LEU LEU A . n A 1 120 LEU 120 226 226 LEU LEU A . n A 1 121 ASN 121 227 227 ASN ASN A . n A 1 122 THR 122 228 228 THR THR A . n A 1 123 ASP 123 229 229 ASP ASP A . n A 1 124 ARG 124 230 230 ARG ARG A . n A 1 125 PRO 125 231 231 PRO PRO A . n A 1 126 VAL 126 232 232 VAL VAL A . n A 1 127 LYS 127 233 233 LYS LYS A . n A 1 128 LEU 128 234 234 LEU LEU A . n A 1 129 LEU 129 235 235 LEU LEU A . n A 1 130 ILE 130 236 236 ILE ILE A . n A 1 131 VAL 131 237 237 VAL VAL A . n A 1 132 ASP 132 238 238 ASP ASP A . n A 1 133 SER 133 239 239 SER SER A . n A 1 134 LEU 134 240 240 LEU LEU A . n A 1 135 THR 135 241 241 THR THR A . n A 1 136 SER 136 242 242 SER SER A . n A 1 137 HIS 137 243 243 HIS HIS A . n A 1 138 PHE 138 244 244 PHE PHE A . n A 1 139 ARG 139 245 245 ARG ARG A . n A 1 140 SER 140 246 246 SER SER A . n A 1 141 GLU 141 247 247 GLU GLU A . n A 1 142 TYR 142 248 248 TYR TYR A . n A 1 143 ILE 143 249 249 ILE ILE A . n A 1 144 GLY 144 250 250 GLY GLY A . n A 1 145 ALA 145 253 253 ALA ALA A . n A 1 146 LEU 146 254 254 LEU LEU A . n A 1 147 ALA 147 255 255 ALA ALA A . n A 1 148 GLU 148 256 256 GLU GLU A . n A 1 149 ARG 149 257 257 ARG ARG A . n A 1 150 GLN 150 258 258 GLN GLN A . n A 1 151 GLN 151 259 259 GLN GLN A . n A 1 152 LYS 152 260 260 LYS LYS A . n A 1 153 LEU 153 261 261 LEU LEU A . n A 1 154 ALA 154 262 262 ALA ALA A . n A 1 155 LYS 155 263 263 LYS LYS A . n A 1 156 HIS 156 264 264 HIS HIS A . n A 1 157 LEU 157 265 265 LEU LEU A . n A 1 158 ALA 158 266 266 ALA ALA A . n A 1 159 ASP 159 267 267 ASP ASP A . n A 1 160 LEU 160 268 268 LEU LEU A . n A 1 161 HIS 161 269 269 HIS HIS A . n A 1 162 ARG 162 270 270 ARG ARG A . n A 1 163 LEU 163 271 271 LEU LEU A . n A 1 164 ALA 164 272 272 ALA ALA A . n A 1 165 ASN 165 273 273 ASN ASN A . n A 1 166 LEU 166 274 274 LEU LEU A . n A 1 167 TYR 167 275 275 TYR TYR A . n A 1 168 ASP 168 276 276 ASP ASP A . n A 1 169 ILE 169 277 277 ILE ILE A . n A 1 170 ALA 170 278 278 ALA ALA A . n A 1 171 VAL 171 279 279 VAL VAL A . n A 1 172 PHE 172 280 280 PHE PHE A . n A 1 173 VAL 173 281 281 VAL VAL A . n A 1 174 THR 174 282 282 THR THR A . n A 1 175 ASN 175 283 283 ASN ASN A . n A 1 176 GLN 176 284 284 GLN GLN A . n A 1 177 VAL 177 285 285 VAL VAL A . n A 1 178 GLN 178 286 286 GLN GLN A . n A 1 179 ALA 179 287 287 ALA ALA A . n A 1 180 ASN 180 288 288 ASN ASN A . n A 1 181 GLY 181 289 289 GLY GLY A . n A 1 182 GLY 182 302 302 GLY GLY A . n A 1 183 HIS 183 303 303 HIS HIS A . n A 1 184 ILE 184 304 304 ILE ILE A . n A 1 185 LEU 185 305 305 LEU LEU A . n A 1 186 ALA 186 306 306 ALA ALA A . n A 1 187 HIS 187 307 307 HIS HIS A . n A 1 188 SER 188 308 308 SER SER A . n A 1 189 ALA 189 309 309 ALA ALA A . n A 1 190 THR 190 310 310 THR THR A . n A 1 191 LEU 191 311 311 LEU LEU A . n A 1 192 ARG 192 312 312 ARG ARG A . n A 1 193 VAL 193 313 313 VAL VAL A . n A 1 194 TYR 194 314 314 TYR TYR A . n A 1 195 LEU 195 315 315 LEU LEU A . n A 1 196 ARG 196 316 316 ARG ARG A . n A 1 197 LYS 197 317 317 LYS LYS A . n A 1 198 GLY 198 318 318 GLY GLY A . n A 1 199 LYS 199 319 319 LYS LYS A . n A 1 200 GLY 200 320 320 GLY GLY A . n A 1 201 GLY 201 321 321 GLY GLY A . n A 1 202 LYS 202 322 322 LYS LYS A . n A 1 203 ARG 203 323 323 ARG ARG A . n A 1 204 ILE 204 324 324 ILE ILE A . n A 1 205 ALA 205 325 325 ALA ALA A . n A 1 206 ARG 206 326 326 ARG ARG A . n A 1 207 LEU 207 327 327 LEU LEU A . n A 1 208 ILE 208 328 328 ILE ILE A . n A 1 209 ASP 209 329 329 ASP ASP A . n A 1 210 ALA 210 330 ? ? ? A . n A 1 211 PRO 211 331 ? ? ? A . n A 1 212 HIS 212 332 ? ? ? A . n A 1 213 LEU 213 333 ? ? ? A . n A 1 214 PRO 214 334 ? ? ? A . n A 1 215 GLU 215 335 ? ? ? A . n A 1 216 GLY 216 336 336 GLY GLY A . n A 1 217 GLU 217 337 337 GLU GLU A . n A 1 218 ALA 218 338 338 ALA ALA A . n A 1 219 VAL 219 339 339 VAL VAL A . n A 1 220 PHE 220 340 340 PHE PHE A . n A 1 221 SER 221 341 341 SER SER A . n A 1 222 ILE 222 342 342 ILE ILE A . n A 1 223 THR 223 343 343 THR THR A . n A 1 224 GLU 224 344 344 GLU GLU A . n A 1 225 LYS 225 345 345 LYS LYS A . n A 1 226 GLY 226 346 346 GLY GLY A . n A 1 227 ILE 227 347 347 ILE ILE A . n A 1 228 GLU 228 348 348 GLU GLU A . n A 1 229 ASP 229 349 349 ASP ASP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 D48 1 401 401 D48 N12 A . C 3 PO4 1 402 1 PO4 PO4 A . D 4 HOH 1 501 188 HOH HOH A . D 4 HOH 2 502 184 HOH HOH A . D 4 HOH 3 503 191 HOH HOH A . D 4 HOH 4 504 197 HOH HOH A . D 4 HOH 5 505 193 HOH HOH A . D 4 HOH 6 506 187 HOH HOH A . D 4 HOH 7 507 208 HOH HOH A . D 4 HOH 8 508 183 HOH HOH A . D 4 HOH 9 509 137 HOH HOH A . D 4 HOH 10 510 195 HOH HOH A . D 4 HOH 11 511 37 HOH HOH A . D 4 HOH 12 512 218 HOH HOH A . D 4 HOH 13 513 190 HOH HOH A . D 4 HOH 14 514 117 HOH HOH A . D 4 HOH 15 515 54 HOH HOH A . D 4 HOH 16 516 103 HOH HOH A . D 4 HOH 17 517 162 HOH HOH A . D 4 HOH 18 518 112 HOH HOH A . D 4 HOH 19 519 181 HOH HOH A . D 4 HOH 20 520 115 HOH HOH A . D 4 HOH 21 521 227 HOH HOH A . D 4 HOH 22 522 107 HOH HOH A . D 4 HOH 23 523 217 HOH HOH A . D 4 HOH 24 524 235 HOH HOH A . D 4 HOH 25 525 30 HOH HOH A . D 4 HOH 26 526 45 HOH HOH A . D 4 HOH 27 527 234 HOH HOH A . D 4 HOH 28 528 41 HOH HOH A . D 4 HOH 29 529 46 HOH HOH A . D 4 HOH 30 530 79 HOH HOH A . D 4 HOH 31 531 161 HOH HOH A . D 4 HOH 32 532 50 HOH HOH A . D 4 HOH 33 533 254 HOH HOH A . D 4 HOH 34 534 203 HOH HOH A . D 4 HOH 35 535 83 HOH HOH A . D 4 HOH 36 536 69 HOH HOH A . D 4 HOH 37 537 49 HOH HOH A . D 4 HOH 38 538 88 HOH HOH A . D 4 HOH 39 539 196 HOH HOH A . D 4 HOH 40 540 74 HOH HOH A . D 4 HOH 41 541 48 HOH HOH A . D 4 HOH 42 542 11 HOH HOH A . D 4 HOH 43 543 78 HOH HOH A . D 4 HOH 44 544 133 HOH HOH A . D 4 HOH 45 545 101 HOH HOH A . D 4 HOH 46 546 43 HOH HOH A . D 4 HOH 47 547 82 HOH HOH A . D 4 HOH 48 548 28 HOH HOH A . D 4 HOH 49 549 134 HOH HOH A . D 4 HOH 50 550 6 HOH HOH A . D 4 HOH 51 551 39 HOH HOH A . D 4 HOH 52 552 98 HOH HOH A . D 4 HOH 53 553 14 HOH HOH A . D 4 HOH 54 554 59 HOH HOH A . D 4 HOH 55 555 4 HOH HOH A . D 4 HOH 56 556 151 HOH HOH A . D 4 HOH 57 557 31 HOH HOH A . D 4 HOH 58 558 207 HOH HOH A . D 4 HOH 59 559 26 HOH HOH A . D 4 HOH 60 560 1 HOH HOH A . D 4 HOH 61 561 15 HOH HOH A . D 4 HOH 62 562 84 HOH HOH A . D 4 HOH 63 563 7 HOH HOH A . D 4 HOH 64 564 20 HOH HOH A . D 4 HOH 65 565 120 HOH HOH A . D 4 HOH 66 566 76 HOH HOH A . D 4 HOH 67 567 177 HOH HOH A . D 4 HOH 68 568 13 HOH HOH A . D 4 HOH 69 569 9 HOH HOH A . D 4 HOH 70 570 95 HOH HOH A . D 4 HOH 71 571 66 HOH HOH A . D 4 HOH 72 572 126 HOH HOH A . D 4 HOH 73 573 147 HOH HOH A . D 4 HOH 74 574 34 HOH HOH A . D 4 HOH 75 575 172 HOH HOH A . D 4 HOH 76 576 215 HOH HOH A . D 4 HOH 77 577 140 HOH HOH A . D 4 HOH 78 578 127 HOH HOH A . D 4 HOH 79 579 62 HOH HOH A . D 4 HOH 80 580 33 HOH HOH A . D 4 HOH 81 581 5 HOH HOH A . D 4 HOH 82 582 170 HOH HOH A . D 4 HOH 83 583 25 HOH HOH A . D 4 HOH 84 584 131 HOH HOH A . D 4 HOH 85 585 24 HOH HOH A . D 4 HOH 86 586 3 HOH HOH A . D 4 HOH 87 587 210 HOH HOH A . D 4 HOH 88 588 144 HOH HOH A . D 4 HOH 89 589 22 HOH HOH A . D 4 HOH 90 590 173 HOH HOH A . D 4 HOH 91 591 17 HOH HOH A . D 4 HOH 92 592 105 HOH HOH A . D 4 HOH 93 593 2 HOH HOH A . D 4 HOH 94 594 8 HOH HOH A . D 4 HOH 95 595 73 HOH HOH A . D 4 HOH 96 596 72 HOH HOH A . D 4 HOH 97 597 125 HOH HOH A . D 4 HOH 98 598 42 HOH HOH A . D 4 HOH 99 599 220 HOH HOH A . D 4 HOH 100 600 70 HOH HOH A . D 4 HOH 101 601 55 HOH HOH A . D 4 HOH 102 602 200 HOH HOH A . D 4 HOH 103 603 111 HOH HOH A . D 4 HOH 104 604 75 HOH HOH A . D 4 HOH 105 605 199 HOH HOH A . D 4 HOH 106 606 12 HOH HOH A . D 4 HOH 107 607 67 HOH HOH A . D 4 HOH 108 608 221 HOH HOH A . D 4 HOH 109 609 230 HOH HOH A . D 4 HOH 110 610 175 HOH HOH A . D 4 HOH 111 611 253 HOH HOH A . D 4 HOH 112 612 148 HOH HOH A . D 4 HOH 113 613 233 HOH HOH A . D 4 HOH 114 614 128 HOH HOH A . D 4 HOH 115 615 53 HOH HOH A . D 4 HOH 116 616 64 HOH HOH A . D 4 HOH 117 617 23 HOH HOH A . D 4 HOH 118 618 40 HOH HOH A . D 4 HOH 119 619 141 HOH HOH A . D 4 HOH 120 620 18 HOH HOH A . D 4 HOH 121 621 47 HOH HOH A . D 4 HOH 122 622 21 HOH HOH A . D 4 HOH 123 623 100 HOH HOH A . D 4 HOH 124 624 61 HOH HOH A . D 4 HOH 125 625 29 HOH HOH A . D 4 HOH 126 626 91 HOH HOH A . D 4 HOH 127 627 52 HOH HOH A . D 4 HOH 128 628 19 HOH HOH A . D 4 HOH 129 629 198 HOH HOH A . D 4 HOH 130 630 121 HOH HOH A . D 4 HOH 131 631 60 HOH HOH A . D 4 HOH 132 632 27 HOH HOH A . D 4 HOH 133 633 169 HOH HOH A . D 4 HOH 134 634 246 HOH HOH A . D 4 HOH 135 635 153 HOH HOH A . D 4 HOH 136 636 250 HOH HOH A . D 4 HOH 137 637 150 HOH HOH A . D 4 HOH 138 638 16 HOH HOH A . D 4 HOH 139 639 189 HOH HOH A . D 4 HOH 140 640 159 HOH HOH A . D 4 HOH 141 641 77 HOH HOH A . D 4 HOH 142 642 139 HOH HOH A . D 4 HOH 143 643 38 HOH HOH A . D 4 HOH 144 644 81 HOH HOH A . D 4 HOH 145 645 94 HOH HOH A . D 4 HOH 146 646 35 HOH HOH A . D 4 HOH 147 647 36 HOH HOH A . D 4 HOH 148 648 179 HOH HOH A . D 4 HOH 149 649 143 HOH HOH A . D 4 HOH 150 650 231 HOH HOH A . D 4 HOH 151 651 182 HOH HOH A . D 4 HOH 152 652 108 HOH HOH A . D 4 HOH 153 653 166 HOH HOH A . D 4 HOH 154 654 58 HOH HOH A . D 4 HOH 155 655 214 HOH HOH A . D 4 HOH 156 656 142 HOH HOH A . D 4 HOH 157 657 154 HOH HOH A . D 4 HOH 158 658 10 HOH HOH A . D 4 HOH 159 659 242 HOH HOH A . D 4 HOH 160 660 163 HOH HOH A . D 4 HOH 161 661 92 HOH HOH A . D 4 HOH 162 662 160 HOH HOH A . D 4 HOH 163 663 85 HOH HOH A . D 4 HOH 164 664 89 HOH HOH A . D 4 HOH 165 665 32 HOH HOH A . D 4 HOH 166 666 194 HOH HOH A . D 4 HOH 167 667 201 HOH HOH A . D 4 HOH 168 668 157 HOH HOH A . D 4 HOH 169 669 51 HOH HOH A . D 4 HOH 170 670 180 HOH HOH A . D 4 HOH 171 671 138 HOH HOH A . D 4 HOH 172 672 224 HOH HOH A . D 4 HOH 173 673 213 HOH HOH A . D 4 HOH 174 674 129 HOH HOH A . D 4 HOH 175 675 238 HOH HOH A . D 4 HOH 176 676 186 HOH HOH A . D 4 HOH 177 677 158 HOH HOH A . D 4 HOH 178 678 251 HOH HOH A . D 4 HOH 179 679 249 HOH HOH A . D 4 HOH 180 680 80 HOH HOH A . D 4 HOH 181 681 204 HOH HOH A . D 4 HOH 182 682 202 HOH HOH A . D 4 HOH 183 683 256 HOH HOH A . D 4 HOH 184 684 209 HOH HOH A . D 4 HOH 185 685 119 HOH HOH A . D 4 HOH 186 686 123 HOH HOH A . D 4 HOH 187 687 164 HOH HOH A . D 4 HOH 188 688 104 HOH HOH A . D 4 HOH 189 689 232 HOH HOH A . D 4 HOH 190 690 155 HOH HOH A . D 4 HOH 191 691 239 HOH HOH A . D 4 HOH 192 692 171 HOH HOH A . D 4 HOH 193 693 132 HOH HOH A . D 4 HOH 194 694 226 HOH HOH A . D 4 HOH 195 695 206 HOH HOH A . D 4 HOH 196 696 113 HOH HOH A . D 4 HOH 197 697 243 HOH HOH A . D 4 HOH 198 698 109 HOH HOH A . D 4 HOH 199 699 116 HOH HOH A . D 4 HOH 200 700 96 HOH HOH A . D 4 HOH 201 701 165 HOH HOH A . D 4 HOH 202 702 71 HOH HOH A . D 4 HOH 203 703 44 HOH HOH A . D 4 HOH 204 704 124 HOH HOH A . D 4 HOH 205 705 240 HOH HOH A . D 4 HOH 206 706 236 HOH HOH A . D 4 HOH 207 707 145 HOH HOH A . D 4 HOH 208 708 135 HOH HOH A . D 4 HOH 209 709 114 HOH HOH A . D 4 HOH 210 710 222 HOH HOH A . D 4 HOH 211 711 97 HOH HOH A . D 4 HOH 212 712 130 HOH HOH A . D 4 HOH 213 713 63 HOH HOH A . D 4 HOH 214 714 174 HOH HOH A . D 4 HOH 215 715 136 HOH HOH A . D 4 HOH 216 716 241 HOH HOH A . D 4 HOH 217 717 237 HOH HOH A . D 4 HOH 218 718 178 HOH HOH A . D 4 HOH 219 719 122 HOH HOH A . D 4 HOH 220 720 185 HOH HOH A . D 4 HOH 221 721 118 HOH HOH A . D 4 HOH 222 722 152 HOH HOH A . D 4 HOH 223 723 176 HOH HOH A . D 4 HOH 224 724 65 HOH HOH A . D 4 HOH 225 725 110 HOH HOH A . D 4 HOH 226 726 244 HOH HOH A . D 4 HOH 227 727 90 HOH HOH A . D 4 HOH 228 728 255 HOH HOH A . D 4 HOH 229 729 192 HOH HOH A . D 4 HOH 230 730 57 HOH HOH A . D 4 HOH 231 731 102 HOH HOH A . D 4 HOH 232 732 168 HOH HOH A . D 4 HOH 233 733 228 HOH HOH A . D 4 HOH 234 734 99 HOH HOH A . D 4 HOH 235 735 223 HOH HOH A . D 4 HOH 236 736 247 HOH HOH A . D 4 HOH 237 737 149 HOH HOH A . D 4 HOH 238 738 245 HOH HOH A . D 4 HOH 239 739 93 HOH HOH A . D 4 HOH 240 740 56 HOH HOH A . D 4 HOH 241 741 216 HOH HOH A . D 4 HOH 242 742 106 HOH HOH A . D 4 HOH 243 743 68 HOH HOH A . D 4 HOH 244 744 87 HOH HOH A . D 4 HOH 245 745 205 HOH HOH A . D 4 HOH 246 746 86 HOH HOH A . D 4 HOH 247 747 146 HOH HOH A . D 4 HOH 248 748 219 HOH HOH A . D 4 HOH 249 749 229 HOH HOH A . D 4 HOH 250 750 156 HOH HOH A . D 4 HOH 251 751 212 HOH HOH A . D 4 HOH 252 752 211 HOH HOH A . D 4 HOH 253 753 167 HOH HOH A . D 4 HOH 254 754 225 HOH HOH A . D 4 HOH 255 755 248 HOH HOH A . D 4 HOH 256 756 252 HOH HOH A . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XDS . ? package 'Wolfgang Kabsch' Wolfgang.Kabsch@mpimf-heidelberg.mpg.de 'data reduction' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/ ? ? 2 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 3 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 PHENIX 1.16_3549 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 5 PDB_EXTRACT 3.25 'Apr. 1, 2019' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # _cell.entry_id 5QUD _cell.length_a 68.988 _cell.length_b 72.852 _cell.length_c 40.314 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QUD _symmetry.Int_Tables_number 18 _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? # _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 _exptl.entry_id 5QUD # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.00 _exptl_crystal.density_percent_sol 38.59 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pdbx_details '50 mM Na/K phospate, 5% PEG1000H' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp_details ? # _diffrn.id 1 _diffrn.crystal_id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2009-02-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_scattering_type x-ray _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9794 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06DA' _diffrn_source.pdbx_wavelength_list 0.9794 _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06DA _diffrn_source.pdbx_wavelength ? # _reflns.entry_id 5QUD _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 36.426 _reflns.d_resolution_high 1.300 _reflns.number_obs 43006 _reflns.number_all ? _reflns.percent_possible_obs 84.700 _reflns.pdbx_Rmerge_I_obs 0.064 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.630 _reflns.B_iso_Wilson_estimate 17.475 _reflns.pdbx_redundancy 6.433 _reflns.pdbx_Rrim_I_all 0.070 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_CC_half 0.999 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_number_measured_all 276648 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_chi_squared 1.001 _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.details ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_CC_half 1 1 1.300 1.380 11974 ? 3380 ? 0.786 1.610 ? ? 3.543 ? ? 8075 ? ? ? ? ? 41.900 0.922 ? 0.586 1 2 1.380 1.470 23069 ? 5068 ? 0.496 3.050 ? ? 4.552 ? ? 7595 ? ? ? ? ? 66.700 0.560 ? 0.836 1 3 1.470 1.590 41319 ? 6609 ? 0.300 6.300 ? ? 6.252 ? ? 7117 ? ? ? ? ? 92.900 0.327 ? 0.952 1 4 1.590 1.740 47710 ? 6571 ? 0.193 10.180 ? ? 7.261 ? ? 6572 ? ? ? ? ? 100.000 0.208 ? 0.984 1 5 1.740 1.950 43327 ? 5948 ? 0.109 16.660 ? ? 7.284 ? ? 5949 ? ? ? ? ? 100.000 0.117 ? 0.994 1 6 1.950 2.250 38436 ? 5305 ? 0.065 26.030 ? ? 7.245 ? ? 5305 ? ? ? ? ? 100.000 0.070 ? 0.998 1 7 2.250 2.750 32338 ? 4501 ? 0.048 33.630 ? ? 7.185 ? ? 4501 ? ? ? ? ? 100.000 0.052 ? 0.998 1 8 2.750 3.880 24887 ? 3554 ? 0.040 41.090 ? ? 7.003 ? ? 3554 ? ? ? ? ? 100.000 0.044 ? 0.999 1 9 3.880 36.426 13588 ? 2070 ? 0.032 45.620 ? ? 6.564 ? ? 2085 ? ? ? ? ? 99.300 0.035 ? 0.999 # _refine.entry_id 5QUD _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 1.3000 _refine.ls_d_res_low 36.4260 _refine.pdbx_ls_sigma_F 1.360 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 84.7500 _refine.ls_number_reflns_obs 43000 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1655 _refine.ls_R_factor_R_work 0.1640 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1934 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0700 _refine.ls_number_reflns_R_free 2179 _refine.ls_number_reflns_R_work 40821 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 16.6077 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.1300 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 49.640 _refine.B_iso_min 6.130 _refine.pdbx_overall_phase_error 20.6000 _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.3000 _refine_hist.d_res_low 36.4260 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 256 _refine_hist.number_atoms_total 2005 _refine_hist.pdbx_number_residues_total 222 _refine_hist.pdbx_B_iso_mean_ligand 31.43 _refine_hist.pdbx_B_iso_mean_solvent 30.33 _refine_hist.pdbx_number_atoms_protein 1724 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id 1.3000 1.3283 16 35.0000 1020 . 0.3368 0.3750 . 47 0.0000 1067 . 'X-RAY DIFFRACTION' 1.3283 1.3592 16 44.0000 1281 . 0.2587 0.3110 . 77 0.0000 1358 . 'X-RAY DIFFRACTION' 1.3592 1.3932 16 54.0000 1621 . 0.2042 0.2766 . 84 0.0000 1705 . 'X-RAY DIFFRACTION' 1.3932 1.4308 16 63.0000 1875 . 0.1784 0.2779 . 94 0.0000 1969 . 'X-RAY DIFFRACTION' 1.4308 1.4729 16 74.0000 2180 . 0.1678 0.2067 . 125 0.0000 2305 . 'X-RAY DIFFRACTION' 1.4729 1.5205 16 86.0000 2571 . 0.1527 0.2148 . 125 0.0000 2696 . 'X-RAY DIFFRACTION' 1.5205 1.5748 16 98.0000 2924 . 0.1450 0.1883 . 146 0.0000 3070 . 'X-RAY DIFFRACTION' 1.5748 1.6379 16 100.0000 3002 . 0.1468 0.1992 . 150 0.0000 3152 . 'X-RAY DIFFRACTION' 1.6379 1.7124 16 100.0000 2966 . 0.1495 0.1805 . 166 0.0000 3132 . 'X-RAY DIFFRACTION' 1.7124 1.8027 16 100.0000 2991 . 0.1515 0.1961 . 163 0.0000 3154 . 'X-RAY DIFFRACTION' 1.8027 1.9156 16 100.0000 3008 . 0.1501 0.1808 . 177 0.0000 3185 . 'X-RAY DIFFRACTION' 1.9156 2.0635 16 100.0000 2997 . 0.1500 0.1787 . 157 0.0000 3154 . 'X-RAY DIFFRACTION' 2.0635 2.2712 16 100.0000 3030 . 0.1485 0.1887 . 170 0.0000 3200 . 'X-RAY DIFFRACTION' 2.2712 2.5997 16 100.0000 3052 . 0.1606 0.1851 . 162 0.0000 3214 . 'X-RAY DIFFRACTION' 2.5997 3.2751 16 100.0000 3101 . 0.1740 0.1846 . 154 0.0000 3255 . 'X-RAY DIFFRACTION' 3.2751 36.4403 16 100.0000 3202 . 0.1748 0.1900 . 182 0.0000 3384 . 'X-RAY DIFFRACTION' # _struct.entry_id 5QUD _struct.title 'HumRadA1.2 soaked with napht-2,3-diol for 5 minutes at 20 mM' _struct.pdbx_CASP_flag ? _struct.pdbx_model_details ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5QUD _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' _struct_keywords.text 'RAD51, RadA, inhibition, FBDD, PPI, DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5QUD _struct_ref.pdbx_db_accession 5QUD _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5QUD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 229 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5QUD _struct_ref_seq.db_align_beg 107 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 349 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 107 _struct_ref_seq.pdbx_auth_seq_align_end 349 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 11 ? LEU A 18 ? SER A 117 LEU A 124 1 ? 8 HELX_P HELX_P2 AA2 GLY A 37 ? VAL A 49 ? GLY A 143 VAL A 155 1 ? 13 HELX_P HELX_P3 AA3 GLN A 50 ? LEU A 51 ? GLN A 156 LEU A 157 5 ? 2 HELX_P HELX_P4 AA4 PRO A 52 ? GLY A 56 ? PRO A 158 GLY A 162 5 ? 5 HELX_P HELX_P5 AA5 ARG A 72 ? ASN A 82 ? ARG A 178 ASN A 188 1 ? 11 HELX_P HELX_P6 AA6 ASP A 86 ? HIS A 93 ? ASP A 192 HIS A 199 1 ? 8 HELX_P HELX_P7 AA7 ASN A 101 ? LEU A 120 ? ASN A 207 LEU A 226 1 ? 20 HELX_P HELX_P8 AA8 THR A 135 ? TYR A 142 ? THR A 241 TYR A 248 1 ? 8 HELX_P HELX_P9 AA9 ALA A 145 ? ASP A 168 ? ALA A 253 ASP A 276 1 ? 24 HELX_P HELX_P10 AB1 LYS A 199 ? GLY A 201 ? LYS A 319 GLY A 321 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASP _struct_mon_prot_cis.label_seq_id 132 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASP _struct_mon_prot_cis.auth_seq_id 238 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 133 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 239 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 3.75 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 9 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA2 5 6 ? parallel AA2 6 7 ? anti-parallel AA2 7 8 ? anti-parallel AA2 8 9 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ARG A 6 ? ILE A 7 ? ARG A 112 ILE A 113 AA1 2 ILE A 22 ? GLU A 23 ? ILE A 128 GLU A 129 AA2 1 ILE A 94 ? ARG A 98 ? ILE A 200 ARG A 204 AA2 2 SER A 61 ? ASP A 66 ? SER A 167 ASP A 172 AA2 3 VAL A 126 ? ASP A 132 ? VAL A 232 ASP A 238 AA2 4 ALA A 170 ? GLN A 176 ? ALA A 278 GLN A 284 AA2 5 ALA A 26 ? GLY A 32 ? ALA A 132 GLY A 138 AA2 6 LEU A 191 ? LYS A 197 ? LEU A 311 LYS A 317 AA2 7 ARG A 203 ? ILE A 208 ? ARG A 323 ILE A 328 AA2 8 ALA A 218 ? THR A 223 ? ALA A 338 THR A 343 AA2 9 GLY A 226 ? GLU A 228 ? GLY A 346 GLU A 348 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 7 ? N ILE A 113 O ILE A 22 ? O ILE A 128 AA2 1 2 O ALA A 95 ? O ALA A 201 N VAL A 62 ? N VAL A 168 AA2 2 3 N ILE A 65 ? N ILE A 171 O ILE A 130 ? O ILE A 236 AA2 3 4 N LEU A 129 ? N LEU A 235 O PHE A 172 ? O PHE A 280 AA2 4 5 O VAL A 171 ? O VAL A 279 N THR A 28 ? N THR A 134 AA2 5 6 N GLU A 29 ? N GLU A 135 O VAL A 193 ? O VAL A 313 AA2 6 7 N TYR A 194 ? N TYR A 314 O ARG A 206 ? O ARG A 326 AA2 7 8 N ARG A 203 ? N ARG A 323 O PHE A 220 ? O PHE A 340 AA2 8 9 N SER A 221 ? N SER A 341 O GLU A 228 ? O GLU A 348 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A D48 401 ? 8 'binding site for residue D48 A 401' AC2 Software A PO4 402 ? 11 'binding site for residue PO4 A 402' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 MET A 63 ? MET A 169 . ? 1_555 ? 2 AC1 8 TRP A 64 ? TRP A 170 . ? 1_555 ? 3 AC1 8 ILE A 65 ? ILE A 171 . ? 1_555 ? 4 AC1 8 ALA A 95 ? ALA A 201 . ? 1_555 ? 5 AC1 8 ALA A 97 ? ALA A 203 . ? 1_555 ? 6 AC1 8 LEU A 108 ? LEU A 214 . ? 1_555 ? 7 AC1 8 MET A 115 ? MET A 221 . ? 1_555 ? 8 AC1 8 HOH D . ? HOH A 527 . ? 1_555 ? 9 AC2 11 GLU A 33 ? GLU A 139 . ? 1_555 ? 10 AC2 11 GLY A 35 ? GLY A 141 . ? 1_555 ? 11 AC2 11 SER A 36 ? SER A 142 . ? 1_555 ? 12 AC2 11 GLY A 37 ? GLY A 143 . ? 1_555 ? 13 AC2 11 LYS A 38 ? LYS A 144 . ? 1_555 ? 14 AC2 11 THR A 39 ? THR A 145 . ? 1_555 ? 15 AC2 11 HOH D . ? HOH A 519 . ? 1_555 ? 16 AC2 11 HOH D . ? HOH A 551 . ? 1_555 ? 17 AC2 11 HOH D . ? HOH A 553 . ? 1_555 ? 18 AC2 11 HOH D . ? HOH A 559 . ? 1_555 ? 19 AC2 11 HOH D . ? HOH A 617 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 718 ? ? O A HOH 723 ? ? 2.01 2 1 O A HOH 746 ? ? O A HOH 752 ? ? 2.04 3 1 NH2 A ARG 270 ? A O A HOH 501 ? ? 2.09 4 1 O A HOH 630 ? ? O A HOH 684 ? ? 2.11 5 1 O A LEU 305 ? A O A HOH 502 ? ? 2.12 6 1 NZ A LYS 322 ? ? O A HOH 503 ? ? 2.13 7 1 OE2 A GLU 195 ? ? O A HOH 504 ? ? 2.15 8 1 O A HOH 689 ? ? O A HOH 748 ? ? 2.15 9 1 O A ILE 304 ? A O A HOH 505 ? ? 2.15 10 1 N A THR 310 ? ? O A HOH 506 ? ? 2.17 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 666 ? ? 1_555 O A HOH 729 ? ? 2_555 2.03 2 1 O A HOH 736 ? ? 1_555 O A HOH 749 ? ? 3_556 2.10 3 1 O A HOH 508 ? ? 1_555 O A HOH 528 ? ? 2_555 2.15 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 287 ? A -15.80 109.49 2 1 ASN A 288 ? A 73.44 -6.22 3 1 ILE A 304 ? A 46.71 -140.01 4 1 LEU A 305 ? B -73.14 38.88 5 1 ALA A 306 ? ? 52.16 -129.58 6 1 ALA A 306 ? ? 50.80 -129.58 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLY _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 302 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 A _pdbx_validate_peptide_omega.auth_comp_id_2 HIS _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 303 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 A _pdbx_validate_peptide_omega.omega 140.78 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 727 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _phasing.method MR # _pdbx_entry_details.entry_id 5QUD _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 107 ? A MET 1 2 1 Y 1 A ALA 330 ? A ALA 210 3 1 Y 1 A PRO 331 ? A PRO 211 4 1 Y 1 A HIS 332 ? A HIS 212 5 1 Y 1 A LEU 333 ? A LEU 213 6 1 Y 1 A PRO 334 ? A PRO 214 7 1 Y 1 A GLU 335 ? A GLU 215 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 D48 O1 O N N 74 D48 C1 C Y N 75 D48 C2 C Y N 76 D48 C3 C Y N 77 D48 C4 C Y N 78 D48 C5 C Y N 79 D48 C6 C Y N 80 D48 C7 C Y N 81 D48 C8 C Y N 82 D48 C9 C Y N 83 D48 C10 C Y N 84 D48 O2 O N N 85 D48 H1 H N N 86 D48 H2 H N N 87 D48 H3 H N N 88 D48 H4 H N N 89 D48 H5 H N N 90 D48 H6 H N N 91 D48 H7 H N N 92 D48 H8 H N N 93 GLN N N N N 94 GLN CA C N S 95 GLN C C N N 96 GLN O O N N 97 GLN CB C N N 98 GLN CG C N N 99 GLN CD C N N 100 GLN OE1 O N N 101 GLN NE2 N N N 102 GLN OXT O N N 103 GLN H H N N 104 GLN H2 H N N 105 GLN HA H N N 106 GLN HB2 H N N 107 GLN HB3 H N N 108 GLN HG2 H N N 109 GLN HG3 H N N 110 GLN HE21 H N N 111 GLN HE22 H N N 112 GLN HXT H N N 113 GLU N N N N 114 GLU CA C N S 115 GLU C C N N 116 GLU O O N N 117 GLU CB C N N 118 GLU CG C N N 119 GLU CD C N N 120 GLU OE1 O N N 121 GLU OE2 O N N 122 GLU OXT O N N 123 GLU H H N N 124 GLU H2 H N N 125 GLU HA H N N 126 GLU HB2 H N N 127 GLU HB3 H N N 128 GLU HG2 H N N 129 GLU HG3 H N N 130 GLU HE2 H N N 131 GLU HXT H N N 132 GLY N N N N 133 GLY CA C N N 134 GLY C C N N 135 GLY O O N N 136 GLY OXT O N N 137 GLY H H N N 138 GLY H2 H N N 139 GLY HA2 H N N 140 GLY HA3 H N N 141 GLY HXT H N N 142 HIS N N N N 143 HIS CA C N S 144 HIS C C N N 145 HIS O O N N 146 HIS CB C N N 147 HIS CG C Y N 148 HIS ND1 N Y N 149 HIS CD2 C Y N 150 HIS CE1 C Y N 151 HIS NE2 N Y N 152 HIS OXT O N N 153 HIS H H N N 154 HIS H2 H N N 155 HIS HA H N N 156 HIS HB2 H N N 157 HIS HB3 H N N 158 HIS HD1 H N N 159 HIS HD2 H N N 160 HIS HE1 H N N 161 HIS HE2 H N N 162 HIS HXT H N N 163 HOH O O N N 164 HOH H1 H N N 165 HOH H2 H N N 166 ILE N N N N 167 ILE CA C N S 168 ILE C C N N 169 ILE O O N N 170 ILE CB C N S 171 ILE CG1 C N N 172 ILE CG2 C N N 173 ILE CD1 C N N 174 ILE OXT O N N 175 ILE H H N N 176 ILE H2 H N N 177 ILE HA H N N 178 ILE HB H N N 179 ILE HG12 H N N 180 ILE HG13 H N N 181 ILE HG21 H N N 182 ILE HG22 H N N 183 ILE HG23 H N N 184 ILE HD11 H N N 185 ILE HD12 H N N 186 ILE HD13 H N N 187 ILE HXT H N N 188 LEU N N N N 189 LEU CA C N S 190 LEU C C N N 191 LEU O O N N 192 LEU CB C N N 193 LEU CG C N N 194 LEU CD1 C N N 195 LEU CD2 C N N 196 LEU OXT O N N 197 LEU H H N N 198 LEU H2 H N N 199 LEU HA H N N 200 LEU HB2 H N N 201 LEU HB3 H N N 202 LEU HG H N N 203 LEU HD11 H N N 204 LEU HD12 H N N 205 LEU HD13 H N N 206 LEU HD21 H N N 207 LEU HD22 H N N 208 LEU HD23 H N N 209 LEU HXT H N N 210 LYS N N N N 211 LYS CA C N S 212 LYS C C N N 213 LYS O O N N 214 LYS CB C N N 215 LYS CG C N N 216 LYS CD C N N 217 LYS CE C N N 218 LYS NZ N N N 219 LYS OXT O N N 220 LYS H H N N 221 LYS H2 H N N 222 LYS HA H N N 223 LYS HB2 H N N 224 LYS HB3 H N N 225 LYS HG2 H N N 226 LYS HG3 H N N 227 LYS HD2 H N N 228 LYS HD3 H N N 229 LYS HE2 H N N 230 LYS HE3 H N N 231 LYS HZ1 H N N 232 LYS HZ2 H N N 233 LYS HZ3 H N N 234 LYS HXT H N N 235 MET N N N N 236 MET CA C N S 237 MET C C N N 238 MET O O N N 239 MET CB C N N 240 MET CG C N N 241 MET SD S N N 242 MET CE C N N 243 MET OXT O N N 244 MET H H N N 245 MET H2 H N N 246 MET HA H N N 247 MET HB2 H N N 248 MET HB3 H N N 249 MET HG2 H N N 250 MET HG3 H N N 251 MET HE1 H N N 252 MET HE2 H N N 253 MET HE3 H N N 254 MET HXT H N N 255 PHE N N N N 256 PHE CA C N S 257 PHE C C N N 258 PHE O O N N 259 PHE CB C N N 260 PHE CG C Y N 261 PHE CD1 C Y N 262 PHE CD2 C Y N 263 PHE CE1 C Y N 264 PHE CE2 C Y N 265 PHE CZ C Y N 266 PHE OXT O N N 267 PHE H H N N 268 PHE H2 H N N 269 PHE HA H N N 270 PHE HB2 H N N 271 PHE HB3 H N N 272 PHE HD1 H N N 273 PHE HD2 H N N 274 PHE HE1 H N N 275 PHE HE2 H N N 276 PHE HZ H N N 277 PHE HXT H N N 278 PO4 P P N N 279 PO4 O1 O N N 280 PO4 O2 O N N 281 PO4 O3 O N N 282 PO4 O4 O N N 283 PRO N N N N 284 PRO CA C N S 285 PRO C C N N 286 PRO O O N N 287 PRO CB C N N 288 PRO CG C N N 289 PRO CD C N N 290 PRO OXT O N N 291 PRO H H N N 292 PRO HA H N N 293 PRO HB2 H N N 294 PRO HB3 H N N 295 PRO HG2 H N N 296 PRO HG3 H N N 297 PRO HD2 H N N 298 PRO HD3 H N N 299 PRO HXT H N N 300 SER N N N N 301 SER CA C N S 302 SER C C N N 303 SER O O N N 304 SER CB C N N 305 SER OG O N N 306 SER OXT O N N 307 SER H H N N 308 SER H2 H N N 309 SER HA H N N 310 SER HB2 H N N 311 SER HB3 H N N 312 SER HG H N N 313 SER HXT H N N 314 THR N N N N 315 THR CA C N S 316 THR C C N N 317 THR O O N N 318 THR CB C N R 319 THR OG1 O N N 320 THR CG2 C N N 321 THR OXT O N N 322 THR H H N N 323 THR H2 H N N 324 THR HA H N N 325 THR HB H N N 326 THR HG1 H N N 327 THR HG21 H N N 328 THR HG22 H N N 329 THR HG23 H N N 330 THR HXT H N N 331 TRP N N N N 332 TRP CA C N S 333 TRP C C N N 334 TRP O O N N 335 TRP CB C N N 336 TRP CG C Y N 337 TRP CD1 C Y N 338 TRP CD2 C Y N 339 TRP NE1 N Y N 340 TRP CE2 C Y N 341 TRP CE3 C Y N 342 TRP CZ2 C Y N 343 TRP CZ3 C Y N 344 TRP CH2 C Y N 345 TRP OXT O N N 346 TRP H H N N 347 TRP H2 H N N 348 TRP HA H N N 349 TRP HB2 H N N 350 TRP HB3 H N N 351 TRP HD1 H N N 352 TRP HE1 H N N 353 TRP HE3 H N N 354 TRP HZ2 H N N 355 TRP HZ3 H N N 356 TRP HH2 H N N 357 TRP HXT H N N 358 TYR N N N N 359 TYR CA C N S 360 TYR C C N N 361 TYR O O N N 362 TYR CB C N N 363 TYR CG C Y N 364 TYR CD1 C Y N 365 TYR CD2 C Y N 366 TYR CE1 C Y N 367 TYR CE2 C Y N 368 TYR CZ C Y N 369 TYR OH O N N 370 TYR OXT O N N 371 TYR H H N N 372 TYR H2 H N N 373 TYR HA H N N 374 TYR HB2 H N N 375 TYR HB3 H N N 376 TYR HD1 H N N 377 TYR HD2 H N N 378 TYR HE1 H N N 379 TYR HE2 H N N 380 TYR HH H N N 381 TYR HXT H N N 382 VAL N N N N 383 VAL CA C N S 384 VAL C C N N 385 VAL O O N N 386 VAL CB C N N 387 VAL CG1 C N N 388 VAL CG2 C N N 389 VAL OXT O N N 390 VAL H H N N 391 VAL H2 H N N 392 VAL HA H N N 393 VAL HB H N N 394 VAL HG11 H N N 395 VAL HG12 H N N 396 VAL HG13 H N N 397 VAL HG21 H N N 398 VAL HG22 H N N 399 VAL HG23 H N N 400 VAL HXT H N N 401 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 D48 C5 C4 doub Y N 70 D48 C5 C6 sing Y N 71 D48 C4 C3 sing Y N 72 D48 C6 C7 doub Y N 73 D48 C3 C2 doub Y N 74 D48 C3 C8 sing Y N 75 D48 C7 C8 sing Y N 76 D48 C2 C1 sing Y N 77 D48 C8 C9 doub Y N 78 D48 C1 O1 sing N N 79 D48 C1 C10 doub Y N 80 D48 C9 C10 sing Y N 81 D48 C10 O2 sing N N 82 D48 O1 H1 sing N N 83 D48 C2 H2 sing N N 84 D48 C4 H3 sing N N 85 D48 C5 H4 sing N N 86 D48 C6 H5 sing N N 87 D48 C7 H6 sing N N 88 D48 C9 H7 sing N N 89 D48 O2 H8 sing N N 90 GLN N CA sing N N 91 GLN N H sing N N 92 GLN N H2 sing N N 93 GLN CA C sing N N 94 GLN CA CB sing N N 95 GLN CA HA sing N N 96 GLN C O doub N N 97 GLN C OXT sing N N 98 GLN CB CG sing N N 99 GLN CB HB2 sing N N 100 GLN CB HB3 sing N N 101 GLN CG CD sing N N 102 GLN CG HG2 sing N N 103 GLN CG HG3 sing N N 104 GLN CD OE1 doub N N 105 GLN CD NE2 sing N N 106 GLN NE2 HE21 sing N N 107 GLN NE2 HE22 sing N N 108 GLN OXT HXT sing N N 109 GLU N CA sing N N 110 GLU N H sing N N 111 GLU N H2 sing N N 112 GLU CA C sing N N 113 GLU CA CB sing N N 114 GLU CA HA sing N N 115 GLU C O doub N N 116 GLU C OXT sing N N 117 GLU CB CG sing N N 118 GLU CB HB2 sing N N 119 GLU CB HB3 sing N N 120 GLU CG CD sing N N 121 GLU CG HG2 sing N N 122 GLU CG HG3 sing N N 123 GLU CD OE1 doub N N 124 GLU CD OE2 sing N N 125 GLU OE2 HE2 sing N N 126 GLU OXT HXT sing N N 127 GLY N CA sing N N 128 GLY N H sing N N 129 GLY N H2 sing N N 130 GLY CA C sing N N 131 GLY CA HA2 sing N N 132 GLY CA HA3 sing N N 133 GLY C O doub N N 134 GLY C OXT sing N N 135 GLY OXT HXT sing N N 136 HIS N CA sing N N 137 HIS N H sing N N 138 HIS N H2 sing N N 139 HIS CA C sing N N 140 HIS CA CB sing N N 141 HIS CA HA sing N N 142 HIS C O doub N N 143 HIS C OXT sing N N 144 HIS CB CG sing N N 145 HIS CB HB2 sing N N 146 HIS CB HB3 sing N N 147 HIS CG ND1 sing Y N 148 HIS CG CD2 doub Y N 149 HIS ND1 CE1 doub Y N 150 HIS ND1 HD1 sing N N 151 HIS CD2 NE2 sing Y N 152 HIS CD2 HD2 sing N N 153 HIS CE1 NE2 sing Y N 154 HIS CE1 HE1 sing N N 155 HIS NE2 HE2 sing N N 156 HIS OXT HXT sing N N 157 HOH O H1 sing N N 158 HOH O H2 sing N N 159 ILE N CA sing N N 160 ILE N H sing N N 161 ILE N H2 sing N N 162 ILE CA C sing N N 163 ILE CA CB sing N N 164 ILE CA HA sing N N 165 ILE C O doub N N 166 ILE C OXT sing N N 167 ILE CB CG1 sing N N 168 ILE CB CG2 sing N N 169 ILE CB HB sing N N 170 ILE CG1 CD1 sing N N 171 ILE CG1 HG12 sing N N 172 ILE CG1 HG13 sing N N 173 ILE CG2 HG21 sing N N 174 ILE CG2 HG22 sing N N 175 ILE CG2 HG23 sing N N 176 ILE CD1 HD11 sing N N 177 ILE CD1 HD12 sing N N 178 ILE CD1 HD13 sing N N 179 ILE OXT HXT sing N N 180 LEU N CA sing N N 181 LEU N H sing N N 182 LEU N H2 sing N N 183 LEU CA C sing N N 184 LEU CA CB sing N N 185 LEU CA HA sing N N 186 LEU C O doub N N 187 LEU C OXT sing N N 188 LEU CB CG sing N N 189 LEU CB HB2 sing N N 190 LEU CB HB3 sing N N 191 LEU CG CD1 sing N N 192 LEU CG CD2 sing N N 193 LEU CG HG sing N N 194 LEU CD1 HD11 sing N N 195 LEU CD1 HD12 sing N N 196 LEU CD1 HD13 sing N N 197 LEU CD2 HD21 sing N N 198 LEU CD2 HD22 sing N N 199 LEU CD2 HD23 sing N N 200 LEU OXT HXT sing N N 201 LYS N CA sing N N 202 LYS N H sing N N 203 LYS N H2 sing N N 204 LYS CA C sing N N 205 LYS CA CB sing N N 206 LYS CA HA sing N N 207 LYS C O doub N N 208 LYS C OXT sing N N 209 LYS CB CG sing N N 210 LYS CB HB2 sing N N 211 LYS CB HB3 sing N N 212 LYS CG CD sing N N 213 LYS CG HG2 sing N N 214 LYS CG HG3 sing N N 215 LYS CD CE sing N N 216 LYS CD HD2 sing N N 217 LYS CD HD3 sing N N 218 LYS CE NZ sing N N 219 LYS CE HE2 sing N N 220 LYS CE HE3 sing N N 221 LYS NZ HZ1 sing N N 222 LYS NZ HZ2 sing N N 223 LYS NZ HZ3 sing N N 224 LYS OXT HXT sing N N 225 MET N CA sing N N 226 MET N H sing N N 227 MET N H2 sing N N 228 MET CA C sing N N 229 MET CA CB sing N N 230 MET CA HA sing N N 231 MET C O doub N N 232 MET C OXT sing N N 233 MET CB CG sing N N 234 MET CB HB2 sing N N 235 MET CB HB3 sing N N 236 MET CG SD sing N N 237 MET CG HG2 sing N N 238 MET CG HG3 sing N N 239 MET SD CE sing N N 240 MET CE HE1 sing N N 241 MET CE HE2 sing N N 242 MET CE HE3 sing N N 243 MET OXT HXT sing N N 244 PHE N CA sing N N 245 PHE N H sing N N 246 PHE N H2 sing N N 247 PHE CA C sing N N 248 PHE CA CB sing N N 249 PHE CA HA sing N N 250 PHE C O doub N N 251 PHE C OXT sing N N 252 PHE CB CG sing N N 253 PHE CB HB2 sing N N 254 PHE CB HB3 sing N N 255 PHE CG CD1 doub Y N 256 PHE CG CD2 sing Y N 257 PHE CD1 CE1 sing Y N 258 PHE CD1 HD1 sing N N 259 PHE CD2 CE2 doub Y N 260 PHE CD2 HD2 sing N N 261 PHE CE1 CZ doub Y N 262 PHE CE1 HE1 sing N N 263 PHE CE2 CZ sing Y N 264 PHE CE2 HE2 sing N N 265 PHE CZ HZ sing N N 266 PHE OXT HXT sing N N 267 PO4 P O1 doub N N 268 PO4 P O2 sing N N 269 PO4 P O3 sing N N 270 PO4 P O4 sing N N 271 PRO N CA sing N N 272 PRO N CD sing N N 273 PRO N H sing N N 274 PRO CA C sing N N 275 PRO CA CB sing N N 276 PRO CA HA sing N N 277 PRO C O doub N N 278 PRO C OXT sing N N 279 PRO CB CG sing N N 280 PRO CB HB2 sing N N 281 PRO CB HB3 sing N N 282 PRO CG CD sing N N 283 PRO CG HG2 sing N N 284 PRO CG HG3 sing N N 285 PRO CD HD2 sing N N 286 PRO CD HD3 sing N N 287 PRO OXT HXT sing N N 288 SER N CA sing N N 289 SER N H sing N N 290 SER N H2 sing N N 291 SER CA C sing N N 292 SER CA CB sing N N 293 SER CA HA sing N N 294 SER C O doub N N 295 SER C OXT sing N N 296 SER CB OG sing N N 297 SER CB HB2 sing N N 298 SER CB HB3 sing N N 299 SER OG HG sing N N 300 SER OXT HXT sing N N 301 THR N CA sing N N 302 THR N H sing N N 303 THR N H2 sing N N 304 THR CA C sing N N 305 THR CA CB sing N N 306 THR CA HA sing N N 307 THR C O doub N N 308 THR C OXT sing N N 309 THR CB OG1 sing N N 310 THR CB CG2 sing N N 311 THR CB HB sing N N 312 THR OG1 HG1 sing N N 313 THR CG2 HG21 sing N N 314 THR CG2 HG22 sing N N 315 THR CG2 HG23 sing N N 316 THR OXT HXT sing N N 317 TRP N CA sing N N 318 TRP N H sing N N 319 TRP N H2 sing N N 320 TRP CA C sing N N 321 TRP CA CB sing N N 322 TRP CA HA sing N N 323 TRP C O doub N N 324 TRP C OXT sing N N 325 TRP CB CG sing N N 326 TRP CB HB2 sing N N 327 TRP CB HB3 sing N N 328 TRP CG CD1 doub Y N 329 TRP CG CD2 sing Y N 330 TRP CD1 NE1 sing Y N 331 TRP CD1 HD1 sing N N 332 TRP CD2 CE2 doub Y N 333 TRP CD2 CE3 sing Y N 334 TRP NE1 CE2 sing Y N 335 TRP NE1 HE1 sing N N 336 TRP CE2 CZ2 sing Y N 337 TRP CE3 CZ3 doub Y N 338 TRP CE3 HE3 sing N N 339 TRP CZ2 CH2 doub Y N 340 TRP CZ2 HZ2 sing N N 341 TRP CZ3 CH2 sing Y N 342 TRP CZ3 HZ3 sing N N 343 TRP CH2 HH2 sing N N 344 TRP OXT HXT sing N N 345 TYR N CA sing N N 346 TYR N H sing N N 347 TYR N H2 sing N N 348 TYR CA C sing N N 349 TYR CA CB sing N N 350 TYR CA HA sing N N 351 TYR C O doub N N 352 TYR C OXT sing N N 353 TYR CB CG sing N N 354 TYR CB HB2 sing N N 355 TYR CB HB3 sing N N 356 TYR CG CD1 doub Y N 357 TYR CG CD2 sing Y N 358 TYR CD1 CE1 sing Y N 359 TYR CD1 HD1 sing N N 360 TYR CD2 CE2 doub Y N 361 TYR CD2 HD2 sing N N 362 TYR CE1 CZ doub Y N 363 TYR CE1 HE1 sing N N 364 TYR CE2 CZ sing Y N 365 TYR CE2 HE2 sing N N 366 TYR CZ OH sing N N 367 TYR OH HH sing N N 368 TYR OXT HXT sing N N 369 VAL N CA sing N N 370 VAL N H sing N N 371 VAL N H2 sing N N 372 VAL CA C sing N N 373 VAL CA CB sing N N 374 VAL CA HA sing N N 375 VAL C O doub N N 376 VAL C OXT sing N N 377 VAL CB CG1 sing N N 378 VAL CB CG2 sing N N 379 VAL CB HB sing N N 380 VAL CG1 HG11 sing N N 381 VAL CG1 HG12 sing N N 382 VAL CG1 HG13 sing N N 383 VAL CG2 HG21 sing N N 384 VAL CG2 HG22 sing N N 385 VAL CG2 HG23 sing N N 386 VAL OXT HXT sing N N 387 # _pdbx_audit_support.funding_organization 'Wellcome Trust' _pdbx_audit_support.country 'United Kingdom' _pdbx_audit_support.grant_number '080083/Z/06/Z 91050/Z/10/Z' _pdbx_audit_support.ordinal 1 # _pdbx_deposit_group.group_title 'Soaking test of fragments' _pdbx_deposit_group.group_description 'Evaluation of the effect of ligand soaking time and concentration for fragment-based drug discovery' _pdbx_deposit_group.group_id G_1002113 _pdbx_deposit_group.group_type undefined # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id D48 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id D48 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _atom_sites.entry_id 5QUD _atom_sites.fract_transf_matrix[1][1] 0.014495 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013726 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024805 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C H N O P S # loop_