data_5RU7 # _entry.id 5RU7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.358 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5RU7 pdb_00005ru7 10.2210/pdb5ru7/pdb WWPDB D_1001403677 ? ? # _pdbx_database_status.entry_id 5RU7 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.recvd_initial_deposition_date 2020-09-28 _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Correy, G.J.' 1 ? 'Young, I.D.' 2 ? 'Thompson, M.C.' 3 ? 'Fraser, J.S.' 4 ? # _citation.id primary _citation.title 'Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking.' _citation.journal_abbrev 'Sci Adv' _citation.journal_volume 7 _citation.page_first ? _citation.page_last ? _citation.year 2021 _citation.pdbx_database_id_PubMed 33853786 _citation.pdbx_database_id_DOI 10.1126/sciadv.abf8711 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 2375-2548 _citation.journal_id_CSD ? _citation.book_publisher ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.identifier_ORCID _citation_author.ordinal primary 'Schuller, M.' 0000-0002-1551-0359 1 primary 'Correy, G.J.' 0000-0001-5155-7325 2 primary 'Gahbauer, S.' 0000-0002-3115-9757 3 primary 'Fearon, D.' 0000-0003-3529-7863 4 primary 'Wu, T.' 0000-0001-6988-1414 5 primary 'Diaz, R.E.' 0000-0002-1172-9919 6 primary 'Young, I.D.' 0000-0003-4713-9504 7 primary 'Carvalho Martins, L.' 0000-0002-7747-6782 8 primary 'Smith, D.H.' 0000-0002-5136-4491 9 primary 'Schulze-Gahmen, U.' 0000-0003-3919-4474 10 primary 'Owens, T.W.' 0000-0001-7423-4879 11 primary 'Deshpande, I.' 0000-0002-8276-9635 12 primary 'Merz, G.E.' 0000-0003-0842-4935 13 primary 'Thwin, A.C.' 0000-0002-1423-8189 14 primary 'Biel, J.T.' 0000-0002-0935-8362 15 primary 'Peters, J.K.' 0000-0003-3541-7431 16 primary 'Moritz, M.' 0000-0003-3811-5623 17 primary 'Herrera, N.' 0000-0003-4157-9429 18 primary 'Kratochvil, H.T.' 0000-0001-8039-6823 19 primary 'Aimon, A.' 0000-0002-9135-129X 20 primary 'Bennett, J.M.' 0000-0003-1396-8400 21 primary 'Brandao Neto, J.' 0000-0001-6015-320X 22 primary 'Cohen, A.E.' 0000-0003-2414-9427 23 primary 'Dias, A.' 0000-0003-3609-7003 24 primary 'Douangamath, A.' ? 25 primary 'Dunnett, L.' 0000-0001-6710-6959 26 primary 'Fedorov, O.' 0000-0002-8662-7300 27 primary 'Ferla, M.P.' ? 28 primary 'Fuchs, M.R.' 0000-0001-9784-0927 29 primary 'Gorrie-Stone, T.J.' 0000-0002-1817-1495 30 primary 'Holton, J.M.' 0000-0002-0596-0137 31 primary 'Johnson, M.G.' 0000-0001-9213-0598 32 primary 'Krojer, T.' 0000-0003-0661-0814 33 primary 'Meigs, G.' 0000-0002-8530-661X 34 primary 'Powell, A.J.' 0000-0002-0462-2240 35 primary 'Rack, J.G.M.' 0000-0001-8341-6439 36 primary 'Rangel, V.L.' 0000-0002-7580-3452 37 primary 'Russi, S.' ? 38 primary 'Skyner, R.E.' 0000-0003-3614-6661 39 primary 'Smith, C.A.' 0000-0002-1885-1511 40 primary 'Soares, A.S.' 0000-0002-6565-8503 41 primary 'Wierman, J.L.' 0000-0002-5206-9662 42 primary 'Zhu, K.' ? 43 primary ;O'Brien, P. ; 0000-0002-9966-1962 44 primary 'Jura, N.' 0000-0001-5129-641X 45 primary 'Ashworth, A.' 0000-0003-1446-7878 46 primary 'Irwin, J.J.' 0000-0002-1195-6417 47 primary 'Thompson, M.C.' 0000-0002-6099-2027 48 primary 'Gestwicki, J.E.' ? 49 primary 'von Delft, F.' 0000-0003-0378-0017 50 primary 'Shoichet, B.K.' 0000-0002-6098-7367 51 primary 'Fraser, J.S.' 0000-0002-5080-2859 52 primary 'Ahel, I.' 0000-0002-9446-3756 53 # _cell.entry_id 5RU7 _cell.length_a 88.714 _cell.length_b 88.714 _cell.length_c 39.601 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5RU7 _symmetry.Int_Tables_number 78 _symmetry.space_group_name_H-M 'P 43' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Non-structural protein 3' 18178.766 2 '3.4.19.121, 3.4.22.-' ? ? 'HIS6 purification tag and linker (MHHHHHHSSGVDLGTENLYFQ) cleaved with TEV protease' 2 non-polymer syn 2,5-DIMETHYL-PYRIMIDIN-4-YLAMINE 123.156 1 ? ? ? ? 3 water nat water 18.015 535 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Nsp3,PL2-PRO,Papain-like protease,Papain-like proteinase,PL-PRO' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGS CVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNL YDKLVSSFL ; _entity_poly.pdbx_seq_one_letter_code_can ;SMVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGS CVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNL YDKLVSSFL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 VAL n 1 4 ASN n 1 5 SER n 1 6 PHE n 1 7 SER n 1 8 GLY n 1 9 TYR n 1 10 LEU n 1 11 LYS n 1 12 LEU n 1 13 THR n 1 14 ASP n 1 15 ASN n 1 16 VAL n 1 17 TYR n 1 18 ILE n 1 19 LYS n 1 20 ASN n 1 21 ALA n 1 22 ASP n 1 23 ILE n 1 24 VAL n 1 25 GLU n 1 26 GLU n 1 27 ALA n 1 28 LYS n 1 29 LYS n 1 30 VAL n 1 31 LYS n 1 32 PRO n 1 33 THR n 1 34 VAL n 1 35 VAL n 1 36 VAL n 1 37 ASN n 1 38 ALA n 1 39 ALA n 1 40 ASN n 1 41 VAL n 1 42 TYR n 1 43 LEU n 1 44 LYS n 1 45 HIS n 1 46 GLY n 1 47 GLY n 1 48 GLY n 1 49 VAL n 1 50 ALA n 1 51 GLY n 1 52 ALA n 1 53 LEU n 1 54 ASN n 1 55 LYS n 1 56 ALA n 1 57 THR n 1 58 ASN n 1 59 ASN n 1 60 ALA n 1 61 MET n 1 62 GLN n 1 63 VAL n 1 64 GLU n 1 65 SER n 1 66 ASP n 1 67 ASP n 1 68 TYR n 1 69 ILE n 1 70 ALA n 1 71 THR n 1 72 ASN n 1 73 GLY n 1 74 PRO n 1 75 LEU n 1 76 LYS n 1 77 VAL n 1 78 GLY n 1 79 GLY n 1 80 SER n 1 81 CYS n 1 82 VAL n 1 83 LEU n 1 84 SER n 1 85 GLY n 1 86 HIS n 1 87 ASN n 1 88 LEU n 1 89 ALA n 1 90 LYS n 1 91 HIS n 1 92 CYS n 1 93 LEU n 1 94 HIS n 1 95 VAL n 1 96 VAL n 1 97 GLY n 1 98 PRO n 1 99 ASN n 1 100 VAL n 1 101 ASN n 1 102 LYS n 1 103 GLY n 1 104 GLU n 1 105 ASP n 1 106 ILE n 1 107 GLN n 1 108 LEU n 1 109 LEU n 1 110 LYS n 1 111 SER n 1 112 ALA n 1 113 TYR n 1 114 GLU n 1 115 ASN n 1 116 PHE n 1 117 ASN n 1 118 GLN n 1 119 HIS n 1 120 GLU n 1 121 VAL n 1 122 LEU n 1 123 LEU n 1 124 ALA n 1 125 PRO n 1 126 LEU n 1 127 LEU n 1 128 SER n 1 129 ALA n 1 130 GLY n 1 131 ILE n 1 132 PHE n 1 133 GLY n 1 134 ALA n 1 135 ASP n 1 136 PRO n 1 137 ILE n 1 138 HIS n 1 139 SER n 1 140 LEU n 1 141 ARG n 1 142 VAL n 1 143 CYS n 1 144 VAL n 1 145 ASP n 1 146 THR n 1 147 VAL n 1 148 ARG n 1 149 THR n 1 150 ASN n 1 151 VAL n 1 152 TYR n 1 153 LEU n 1 154 ALA n 1 155 VAL n 1 156 PHE n 1 157 ASP n 1 158 LYS n 1 159 ASN n 1 160 LEU n 1 161 TYR n 1 162 ASP n 1 163 LYS n 1 164 LEU n 1 165 VAL n 1 166 SER n 1 167 SER n 1 168 PHE n 1 169 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 169 _entity_src_gen.gene_src_common_name 2019-nCoV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'rep, 1a-1b' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Severe acute respiratory syndrome coronavirus 2' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2697049 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET22b(+)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code R1AB_SARS2 _struct_ref.pdbx_db_accession P0DTD1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCV LSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYD KLVSSFL ; _struct_ref.pdbx_align_begin 1025 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5RU7 A 3 ? 169 ? P0DTD1 1025 ? 1191 ? 3 169 2 1 5RU7 B 3 ? 169 ? P0DTD1 1025 ? 1191 ? 3 169 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5RU7 SER A 1 ? UNP P0DTD1 ? ? 'expression tag' 1 1 1 5RU7 MET A 2 ? UNP P0DTD1 ? ? 'expression tag' 2 2 2 5RU7 SER B 1 ? UNP P0DTD1 ? ? 'expression tag' 1 3 2 5RU7 MET B 2 ? UNP P0DTD1 ? ? 'expression tag' 2 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PYD non-polymer . 2,5-DIMETHYL-PYRIMIDIN-4-YLAMINE ? 'C6 H9 N3' 123.156 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 _exptl.entry_id 5RU7 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_percent_sol 42.61 _exptl_crystal.density_meas ? _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 9.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '100 mM CHES, 28% PEG 3000' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp_details ? # _diffrn.id 1 _diffrn.crystal_id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.pdbx_collection_date 2020-07-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_scattering_type x-ray _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.88557 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.pdbx_wavelength_list 0.88557 _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_wavelength ? # _reflns.entry_id 5RU7 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 44.360 _reflns.d_resolution_high 1.000 _reflns.number_obs 165281 _reflns.number_all ? _reflns.percent_possible_obs 99.400 _reflns.pdbx_Rmerge_I_obs 0.041 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.490 _reflns.B_iso_Wilson_estimate 13.678 _reflns.pdbx_redundancy 6.341 _reflns.pdbx_Rrim_I_all 0.044 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_CC_half 1.000 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_number_measured_all 1048054 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_chi_squared 0.862 _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.details ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_CC_half 1 1 1.000 1.060 148122 ? 25786 ? 0.568 2.170 ? ? 5.744 ? ? 26753 ? ? ? ? ? 96.400 0.625 ? 0.908 1 2 1.060 1.130 160296 ? 25195 ? 0.296 4.540 ? ? 6.362 ? ? 25199 ? ? ? ? ? 100.000 0.323 ? 0.975 1 3 1.130 1.220 155154 ? 23368 ? 0.179 7.820 ? ? 6.640 ? ? 23373 ? ? ? ? ? 100.000 0.195 ? 0.990 1 4 1.220 1.340 138686 ? 21608 ? 0.123 11.370 ? ? 6.418 ? ? 21614 ? ? ? ? ? 100.000 0.134 ? 0.994 1 5 1.340 1.500 132625 ? 19561 ? 0.088 17.630 ? ? 6.780 ? ? 19561 ? ? ? ? ? 100.000 0.095 ? 0.997 1 6 1.500 1.730 111286 ? 17301 ? 0.059 27.550 ? ? 6.432 ? ? 17309 ? ? ? ? ? 100.000 0.065 ? 0.998 1 7 1.730 2.120 92894 ? 14642 ? 0.043 39.500 ? ? 6.344 ? ? 14644 ? ? ? ? ? 100.000 0.047 ? 0.999 1 8 2.120 2.990 68753 ? 11392 ? 0.035 47.950 ? ? 6.035 ? ? 11394 ? ? ? ? ? 100.000 0.038 ? 0.999 1 9 2.990 44.360 40238 ? 6428 ? 0.026 53.750 ? ? 6.260 ? ? 6433 ? ? ? ? ? 99.900 0.029 ? 0.999 # _refine.entry_id 5RU7 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 1.0000 _refine.ls_d_res_low 44.3600 _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.3800 _refine.ls_number_reflns_obs 165241 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1479 _refine.ls_R_factor_R_work 0.1472 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1619 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.8300 _refine.ls_number_reflns_R_free 7978 _refine.ls_number_reflns_R_work 157263 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 17.3582 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.0700 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 70.090 _refine.B_iso_min 7.770 _refine.pdbx_overall_phase_error 17.1100 _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.0000 _refine_hist.d_res_low 44.3600 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 535 _refine_hist.number_atoms_total 3102 _refine_hist.pdbx_number_residues_total 336 _refine_hist.pdbx_B_iso_mean_ligand 34.87 _refine_hist.pdbx_B_iso_mean_solvent 28.81 _refine_hist.pdbx_number_atoms_protein 2531 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id 1.0000 1.0100 30 88.0000 4650 . 0.3013 0.2858 . 239 0.0000 4889 . 'X-RAY DIFFRACTION' 1.0100 1.0200 30 94.0000 4922 . 0.2483 0.2572 . 239 0.0000 5161 . 'X-RAY DIFFRACTION' 1.0200 1.0400 30 100.0000 5247 . 0.2144 0.2322 . 256 0.0000 5503 . 'X-RAY DIFFRACTION' 1.0400 1.0500 30 100.0000 5212 . 0.1937 0.2177 . 272 0.0000 5484 . 'X-RAY DIFFRACTION' 1.0500 1.0600 30 100.0000 5242 . 0.1787 0.2029 . 315 0.0000 5557 . 'X-RAY DIFFRACTION' 1.0600 1.0800 30 100.0000 5203 . 0.1696 0.1905 . 255 0.0000 5458 . 'X-RAY DIFFRACTION' 1.0800 1.0900 30 100.0000 5266 . 0.1573 0.1772 . 264 0.0000 5530 . 'X-RAY DIFFRACTION' 1.0900 1.1100 30 100.0000 5244 . 0.1500 0.1715 . 251 0.0000 5495 . 'X-RAY DIFFRACTION' 1.1100 1.1300 30 100.0000 5251 . 0.1480 0.1807 . 282 0.0000 5533 . 'X-RAY DIFFRACTION' 1.1300 1.1400 30 100.0000 5279 . 0.1450 0.1538 . 242 0.0000 5521 . 'X-RAY DIFFRACTION' 1.1400 1.1600 30 100.0000 5278 . 0.1381 0.1587 . 252 0.0000 5530 . 'X-RAY DIFFRACTION' 1.1600 1.1900 30 100.0000 5264 . 0.1383 0.1603 . 275 0.0000 5539 . 'X-RAY DIFFRACTION' 1.1900 1.2100 30 100.0000 5183 . 0.1332 0.1606 . 284 0.0000 5467 . 'X-RAY DIFFRACTION' 1.2100 1.2300 30 100.0000 5322 . 0.1322 0.1561 . 238 0.0000 5560 . 'X-RAY DIFFRACTION' 1.2300 1.2600 30 100.0000 5213 . 0.1376 0.1439 . 265 0.0000 5478 . 'X-RAY DIFFRACTION' 1.2600 1.2900 30 100.0000 5296 . 0.1365 0.1613 . 273 0.0000 5569 . 'X-RAY DIFFRACTION' 1.2900 1.3200 30 100.0000 5248 . 0.1332 0.1516 . 281 0.0000 5529 . 'X-RAY DIFFRACTION' 1.3200 1.3600 30 100.0000 5219 . 0.1356 0.1401 . 280 0.0000 5499 . 'X-RAY DIFFRACTION' 1.3600 1.4000 30 100.0000 5272 . 0.1337 0.1507 . 253 0.0000 5525 . 'X-RAY DIFFRACTION' 1.4000 1.4400 30 100.0000 5267 . 0.1334 0.1432 . 266 0.0000 5533 . 'X-RAY DIFFRACTION' 1.4400 1.4900 30 100.0000 5321 . 0.1351 0.1357 . 255 0.0000 5576 . 'X-RAY DIFFRACTION' 1.4900 1.5500 30 100.0000 5221 . 0.1305 0.1469 . 273 0.0000 5494 . 'X-RAY DIFFRACTION' 1.5500 1.6200 30 100.0000 5291 . 0.1315 0.1529 . 266 0.0000 5557 . 'X-RAY DIFFRACTION' 1.6200 1.7100 30 100.0000 5329 . 0.1349 0.1670 . 261 0.0000 5590 . 'X-RAY DIFFRACTION' 1.7100 1.8200 30 100.0000 5279 . 0.1441 0.1502 . 257 0.0000 5536 . 'X-RAY DIFFRACTION' 1.8200 1.9600 30 100.0000 5283 . 0.1453 0.1536 . 281 0.0000 5564 . 'X-RAY DIFFRACTION' 1.9600 2.1500 30 100.0000 5297 . 0.1435 0.1466 . 284 0.0000 5581 . 'X-RAY DIFFRACTION' 2.1500 2.4700 30 100.0000 5327 . 0.1442 0.1440 . 289 0.0000 5616 . 'X-RAY DIFFRACTION' 2.4700 3.1100 30 100.0000 5336 . 0.1514 0.1693 . 260 0.0000 5596 . 'X-RAY DIFFRACTION' 3.1100 44.3600 30 100.0000 5501 . 0.1545 0.1787 . 270 0.0000 5771 . 'X-RAY DIFFRACTION' # _struct.entry_id 5RU7 _struct.title 'PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ZINC000003591110' _struct.pdbx_CASP_flag ? _struct.pdbx_model_details ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5RU7 _struct_keywords.pdbx_keywords 'VIRAL PROTEIN, HYDROLASE' _struct_keywords.text 'Macrodomain, ADP-ribose, SARS-CoV-2, VIRAL PROTEIN, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 22 ? LYS A 31 ? ASP A 22 LYS A 31 1 ? 10 HELX_P HELX_P2 AA2 GLY A 47 ? THR A 57 ? GLY A 47 THR A 57 1 ? 11 HELX_P HELX_P3 AA3 ASN A 59 ? GLY A 73 ? ASN A 59 GLY A 73 1 ? 15 HELX_P HELX_P4 AA4 ASN A 99 ? GLY A 103 ? ASN A 99 GLY A 103 5 ? 5 HELX_P HELX_P5 AA5 GLN A 107 ? ASN A 115 ? GLN A 107 ASN A 115 1 ? 9 HELX_P HELX_P6 AA6 PHE A 116 ? HIS A 119 ? PHE A 116 HIS A 119 5 ? 4 HELX_P HELX_P7 AA7 ALA A 129 ? GLY A 133 ? ALA A 129 GLY A 133 5 ? 5 HELX_P HELX_P8 AA8 ASP A 135 ? VAL A 147 ? ASP A 135 VAL A 147 1 ? 13 HELX_P HELX_P9 AA9 ASP A 157 ? SER A 167 ? ASP A 157 SER A 167 1 ? 11 HELX_P HELX_P10 AB1 ASP B 22 ? LYS B 31 ? ASP B 22 LYS B 31 1 ? 10 HELX_P HELX_P11 AB2 GLY B 47 ? THR B 57 ? GLY B 47 THR B 57 1 ? 11 HELX_P HELX_P12 AB3 ASN B 59 ? GLY B 73 ? ASN B 59 GLY B 73 1 ? 15 HELX_P HELX_P13 AB4 ASN B 99 ? GLY B 103 ? ASN B 99 GLY B 103 5 ? 5 HELX_P HELX_P14 AB5 ASP B 105 ? GLN B 107 ? ASP B 105 GLN B 107 5 ? 3 HELX_P HELX_P15 AB6 LEU B 108 ? ASN B 115 ? LEU B 108 ASN B 115 1 ? 8 HELX_P HELX_P16 AB7 PHE B 116 ? HIS B 119 ? PHE B 116 HIS B 119 5 ? 4 HELX_P HELX_P17 AB8 ALA B 129 ? GLY B 133 ? ALA B 129 GLY B 133 5 ? 5 HELX_P HELX_P18 AB9 ASP B 135 ? VAL B 147 ? ASP B 135 VAL B 147 1 ? 13 HELX_P HELX_P19 AC1 ASP B 157 ? LEU B 169 ? ASP B 157 LEU B 169 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 3 ? AA3 ? 4 ? AA4 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? parallel AA3 3 4 ? parallel AA4 1 2 ? parallel AA4 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 10 ? LYS A 11 ? LEU A 10 LYS A 11 AA1 2 VAL A 16 ? ASN A 20 ? VAL A 16 ASN A 20 AA1 3 ASN A 150 ? VAL A 155 ? ASN A 150 VAL A 155 AA1 4 VAL A 121 ? ALA A 124 ? VAL A 121 ALA A 124 AA2 1 VAL A 34 ? ALA A 38 ? VAL A 34 ALA A 38 AA2 2 HIS A 91 ? VAL A 95 ? HIS A 91 VAL A 95 AA2 3 SER A 80 ? SER A 84 ? SER A 80 SER A 84 AA3 1 LEU B 10 ? LYS B 11 ? LEU B 10 LYS B 11 AA3 2 VAL B 16 ? ASN B 20 ? VAL B 16 ASN B 20 AA3 3 ASN B 150 ? VAL B 155 ? ASN B 150 VAL B 155 AA3 4 VAL B 121 ? ALA B 124 ? VAL B 121 ALA B 124 AA4 1 VAL B 34 ? ALA B 38 ? VAL B 34 ALA B 38 AA4 2 HIS B 91 ? VAL B 95 ? HIS B 91 VAL B 95 AA4 3 SER B 80 ? SER B 84 ? SER B 80 SER B 84 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 10 ? N LEU A 10 O ILE A 18 ? O ILE A 18 AA1 2 3 N TYR A 17 ? N TYR A 17 O LEU A 153 ? O LEU A 153 AA1 3 4 O TYR A 152 ? O TYR A 152 N LEU A 122 ? N LEU A 122 AA2 1 2 N ASN A 37 ? N ASN A 37 O VAL A 95 ? O VAL A 95 AA2 2 3 O CYS A 92 ? O CYS A 92 N LEU A 83 ? N LEU A 83 AA3 1 2 N LEU B 10 ? N LEU B 10 O ILE B 18 ? O ILE B 18 AA3 2 3 N TYR B 17 ? N TYR B 17 O LEU B 153 ? O LEU B 153 AA3 3 4 O TYR B 152 ? O TYR B 152 N LEU B 122 ? N LEU B 122 AA4 1 2 N ASN B 37 ? N ASN B 37 O VAL B 95 ? O VAL B 95 AA4 2 3 O HIS B 94 ? O HIS B 94 N CYS B 81 ? N CYS B 81 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id PYD _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 10 _struct_site.details 'binding site for residue PYD A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 TYR A 9 ? TYR A 9 . ? 3_454 ? 2 AC1 10 LEU A 10 ? LEU A 10 . ? 3_454 ? 3 AC1 10 LYS A 11 ? LYS A 11 . ? 3_454 ? 4 AC1 10 ASP A 22 ? ASP A 22 . ? 1_555 ? 5 AC1 10 ILE A 23 ? ILE A 23 . ? 1_555 ? 6 AC1 10 VAL A 49 ? VAL A 49 . ? 1_555 ? 7 AC1 10 ALA A 52 ? ALA A 52 . ? 1_555 ? 8 AC1 10 ALA A 154 ? ALA A 154 . ? 1_555 ? 9 AC1 10 PHE A 156 ? PHE A 156 . ? 1_555 ? 10 AC1 10 HOH D . ? HOH A 301 . ? 1_555 ? # _atom_sites.entry_id 5RU7 _atom_sites.fract_transf_matrix[1][1] 0.011272 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011272 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025252 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 ? ? ? A . n A 1 2 MET 2 2 ? ? ? A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 ASN 4 4 4 ASN ASN A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 PHE 6 6 6 PHE PHE A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 TYR 9 9 9 TYR TYR A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 ASN 15 15 15 ASN ASN A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 TYR 17 17 17 TYR TYR A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ASN 20 20 20 ASN ASN A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 PRO 32 32 32 PRO PRO A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 TYR 42 42 42 TYR TYR A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 HIS 45 45 45 HIS HIS A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 MET 61 61 61 MET MET A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 TYR 68 68 68 TYR TYR A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 ASN 72 72 72 ASN ASN A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 CYS 81 81 81 CYS CYS A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 HIS 86 86 86 HIS HIS A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 HIS 91 91 91 HIS HIS A . n A 1 92 CYS 92 92 92 CYS CYS A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 HIS 94 94 94 HIS HIS A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 PRO 98 98 98 PRO PRO A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 ASN 101 101 101 ASN ASN A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 GLN 107 107 107 GLN GLN A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 SER 111 111 111 SER SER A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 TYR 113 113 113 TYR TYR A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 ASN 115 115 115 ASN ASN A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 ASN 117 117 117 ASN ASN A . n A 1 118 GLN 118 118 118 GLN GLN A . n A 1 119 HIS 119 119 119 HIS HIS A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 PRO 125 125 125 PRO PRO A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 SER 128 128 128 SER SER A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 GLY 130 130 130 GLY GLY A . n A 1 131 ILE 131 131 131 ILE ILE A . n A 1 132 PHE 132 132 132 PHE PHE A . n A 1 133 GLY 133 133 133 GLY GLY A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 PRO 136 136 136 PRO PRO A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 HIS 138 138 138 HIS HIS A . n A 1 139 SER 139 139 139 SER SER A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 ARG 141 141 141 ARG ARG A . n A 1 142 VAL 142 142 142 VAL VAL A . n A 1 143 CYS 143 143 143 CYS CYS A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 THR 146 146 146 THR THR A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 ARG 148 148 148 ARG ARG A . n A 1 149 THR 149 149 149 THR THR A . n A 1 150 ASN 150 150 150 ASN ASN A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 TYR 152 152 152 TYR TYR A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 VAL 155 155 155 VAL VAL A . n A 1 156 PHE 156 156 156 PHE PHE A . n A 1 157 ASP 157 157 157 ASP ASP A . n A 1 158 LYS 158 158 158 LYS LYS A . n A 1 159 ASN 159 159 159 ASN ASN A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 TYR 161 161 161 TYR TYR A . n A 1 162 ASP 162 162 162 ASP ASP A . n A 1 163 LYS 163 163 163 LYS LYS A . n A 1 164 LEU 164 164 164 LEU LEU A . n A 1 165 VAL 165 165 165 VAL VAL A . n A 1 166 SER 166 166 166 SER SER A . n A 1 167 SER 167 167 167 SER SER A . n A 1 168 PHE 168 168 168 PHE PHE A . n A 1 169 LEU 169 169 169 LEU LEU A . n B 1 1 SER 1 1 1 SER SER B . n B 1 2 MET 2 2 2 MET MET B . n B 1 3 VAL 3 3 3 VAL VAL B . n B 1 4 ASN 4 4 4 ASN ASN B . n B 1 5 SER 5 5 5 SER SER B . n B 1 6 PHE 6 6 6 PHE PHE B . n B 1 7 SER 7 7 7 SER SER B . n B 1 8 GLY 8 8 8 GLY GLY B . n B 1 9 TYR 9 9 9 TYR TYR B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 LYS 11 11 11 LYS LYS B . n B 1 12 LEU 12 12 12 LEU LEU B . n B 1 13 THR 13 13 13 THR THR B . n B 1 14 ASP 14 14 14 ASP ASP B . n B 1 15 ASN 15 15 15 ASN ASN B . n B 1 16 VAL 16 16 16 VAL VAL B . n B 1 17 TYR 17 17 17 TYR TYR B . n B 1 18 ILE 18 18 18 ILE ILE B . n B 1 19 LYS 19 19 19 LYS LYS B . n B 1 20 ASN 20 20 20 ASN ASN B . n B 1 21 ALA 21 21 21 ALA ALA B . n B 1 22 ASP 22 22 22 ASP ASP B . n B 1 23 ILE 23 23 23 ILE ILE B . n B 1 24 VAL 24 24 24 VAL VAL B . n B 1 25 GLU 25 25 25 GLU GLU B . n B 1 26 GLU 26 26 26 GLU GLU B . n B 1 27 ALA 27 27 27 ALA ALA B . n B 1 28 LYS 28 28 28 LYS LYS B . n B 1 29 LYS 29 29 29 LYS LYS B . n B 1 30 VAL 30 30 30 VAL VAL B . n B 1 31 LYS 31 31 31 LYS LYS B . n B 1 32 PRO 32 32 32 PRO PRO B . n B 1 33 THR 33 33 33 THR THR B . n B 1 34 VAL 34 34 34 VAL VAL B . n B 1 35 VAL 35 35 35 VAL VAL B . n B 1 36 VAL 36 36 36 VAL VAL B . n B 1 37 ASN 37 37 37 ASN ASN B . n B 1 38 ALA 38 38 38 ALA ALA B . n B 1 39 ALA 39 39 39 ALA ALA B . n B 1 40 ASN 40 40 40 ASN ASN B . n B 1 41 VAL 41 41 41 VAL VAL B . n B 1 42 TYR 42 42 42 TYR TYR B . n B 1 43 LEU 43 43 43 LEU LEU B . n B 1 44 LYS 44 44 44 LYS LYS B . n B 1 45 HIS 45 45 45 HIS HIS B . n B 1 46 GLY 46 46 46 GLY GLY B . n B 1 47 GLY 47 47 47 GLY GLY B . n B 1 48 GLY 48 48 48 GLY GLY B . n B 1 49 VAL 49 49 49 VAL VAL B . n B 1 50 ALA 50 50 50 ALA ALA B . n B 1 51 GLY 51 51 51 GLY GLY B . n B 1 52 ALA 52 52 52 ALA ALA B . n B 1 53 LEU 53 53 53 LEU LEU B . n B 1 54 ASN 54 54 54 ASN ASN B . n B 1 55 LYS 55 55 55 LYS LYS B . n B 1 56 ALA 56 56 56 ALA ALA B . n B 1 57 THR 57 57 57 THR THR B . n B 1 58 ASN 58 58 58 ASN ASN B . n B 1 59 ASN 59 59 59 ASN ASN B . n B 1 60 ALA 60 60 60 ALA ALA B . n B 1 61 MET 61 61 61 MET MET B . n B 1 62 GLN 62 62 62 GLN GLN B . n B 1 63 VAL 63 63 63 VAL VAL B . n B 1 64 GLU 64 64 64 GLU GLU B . n B 1 65 SER 65 65 65 SER SER B . n B 1 66 ASP 66 66 66 ASP ASP B . n B 1 67 ASP 67 67 67 ASP ASP B . n B 1 68 TYR 68 68 68 TYR TYR B . n B 1 69 ILE 69 69 69 ILE ILE B . n B 1 70 ALA 70 70 70 ALA ALA B . n B 1 71 THR 71 71 71 THR THR B . n B 1 72 ASN 72 72 72 ASN ASN B . n B 1 73 GLY 73 73 73 GLY GLY B . n B 1 74 PRO 74 74 74 PRO PRO B . n B 1 75 LEU 75 75 75 LEU LEU B . n B 1 76 LYS 76 76 76 LYS LYS B . n B 1 77 VAL 77 77 77 VAL VAL B . n B 1 78 GLY 78 78 78 GLY GLY B . n B 1 79 GLY 79 79 79 GLY GLY B . n B 1 80 SER 80 80 80 SER SER B . n B 1 81 CYS 81 81 81 CYS CYS B . n B 1 82 VAL 82 82 82 VAL VAL B . n B 1 83 LEU 83 83 83 LEU LEU B . n B 1 84 SER 84 84 84 SER SER B . n B 1 85 GLY 85 85 85 GLY GLY B . n B 1 86 HIS 86 86 86 HIS HIS B . n B 1 87 ASN 87 87 87 ASN ASN B . n B 1 88 LEU 88 88 88 LEU LEU B . n B 1 89 ALA 89 89 89 ALA ALA B . n B 1 90 LYS 90 90 90 LYS LYS B . n B 1 91 HIS 91 91 91 HIS HIS B . n B 1 92 CYS 92 92 92 CYS CYS B . n B 1 93 LEU 93 93 93 LEU LEU B . n B 1 94 HIS 94 94 94 HIS HIS B . n B 1 95 VAL 95 95 95 VAL VAL B . n B 1 96 VAL 96 96 96 VAL VAL B . n B 1 97 GLY 97 97 97 GLY GLY B . n B 1 98 PRO 98 98 98 PRO PRO B . n B 1 99 ASN 99 99 99 ASN ASN B . n B 1 100 VAL 100 100 100 VAL VAL B . n B 1 101 ASN 101 101 101 ASN ASN B . n B 1 102 LYS 102 102 102 LYS LYS B . n B 1 103 GLY 103 103 103 GLY GLY B . n B 1 104 GLU 104 104 104 GLU GLU B . n B 1 105 ASP 105 105 105 ASP ASP B . n B 1 106 ILE 106 106 106 ILE ILE B . n B 1 107 GLN 107 107 107 GLN GLN B . n B 1 108 LEU 108 108 108 LEU LEU B . n B 1 109 LEU 109 109 109 LEU LEU B . n B 1 110 LYS 110 110 110 LYS LYS B . n B 1 111 SER 111 111 111 SER SER B . n B 1 112 ALA 112 112 112 ALA ALA B . n B 1 113 TYR 113 113 113 TYR TYR B . n B 1 114 GLU 114 114 114 GLU GLU B . n B 1 115 ASN 115 115 115 ASN ASN B . n B 1 116 PHE 116 116 116 PHE PHE B . n B 1 117 ASN 117 117 117 ASN ASN B . n B 1 118 GLN 118 118 118 GLN GLN B . n B 1 119 HIS 119 119 119 HIS HIS B . n B 1 120 GLU 120 120 120 GLU GLU B . n B 1 121 VAL 121 121 121 VAL VAL B . n B 1 122 LEU 122 122 122 LEU LEU B . n B 1 123 LEU 123 123 123 LEU LEU B . n B 1 124 ALA 124 124 124 ALA ALA B . n B 1 125 PRO 125 125 125 PRO PRO B . n B 1 126 LEU 126 126 126 LEU LEU B . n B 1 127 LEU 127 127 127 LEU LEU B . n B 1 128 SER 128 128 128 SER SER B . n B 1 129 ALA 129 129 129 ALA ALA B . n B 1 130 GLY 130 130 130 GLY GLY B . n B 1 131 ILE 131 131 131 ILE ILE B . n B 1 132 PHE 132 132 132 PHE PHE B . n B 1 133 GLY 133 133 133 GLY GLY B . n B 1 134 ALA 134 134 134 ALA ALA B . n B 1 135 ASP 135 135 135 ASP ASP B . n B 1 136 PRO 136 136 136 PRO PRO B . n B 1 137 ILE 137 137 137 ILE ILE B . n B 1 138 HIS 138 138 138 HIS HIS B . n B 1 139 SER 139 139 139 SER SER B . n B 1 140 LEU 140 140 140 LEU LEU B . n B 1 141 ARG 141 141 141 ARG ARG B . n B 1 142 VAL 142 142 142 VAL VAL B . n B 1 143 CYS 143 143 143 CYS CYS B . n B 1 144 VAL 144 144 144 VAL VAL B . n B 1 145 ASP 145 145 145 ASP ASP B . n B 1 146 THR 146 146 146 THR THR B . n B 1 147 VAL 147 147 147 VAL VAL B . n B 1 148 ARG 148 148 148 ARG ARG B . n B 1 149 THR 149 149 149 THR THR B . n B 1 150 ASN 150 150 150 ASN ASN B . n B 1 151 VAL 151 151 151 VAL VAL B . n B 1 152 TYR 152 152 152 TYR TYR B . n B 1 153 LEU 153 153 153 LEU LEU B . n B 1 154 ALA 154 154 154 ALA ALA B . n B 1 155 VAL 155 155 155 VAL VAL B . n B 1 156 PHE 156 156 156 PHE PHE B . n B 1 157 ASP 157 157 157 ASP ASP B . n B 1 158 LYS 158 158 158 LYS LYS B . n B 1 159 ASN 159 159 159 ASN ASN B . n B 1 160 LEU 160 160 160 LEU LEU B . n B 1 161 TYR 161 161 161 TYR TYR B . n B 1 162 ASP 162 162 162 ASP ASP B . n B 1 163 LYS 163 163 163 LYS LYS B . n B 1 164 LEU 164 164 164 LEU LEU B . n B 1 165 VAL 165 165 165 VAL VAL B . n B 1 166 SER 166 166 166 SER SER B . n B 1 167 SER 167 167 167 SER SER B . n B 1 168 PHE 168 168 168 PHE PHE B . n B 1 169 LEU 169 169 169 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PYD 1 201 201 PYD LIG A . D 3 HOH 1 301 84 HOH HOH A . D 3 HOH 2 302 373 HOH HOH A . D 3 HOH 3 303 267 HOH HOH A . D 3 HOH 4 304 73 HOH HOH A . D 3 HOH 5 305 356 HOH HOH A . D 3 HOH 6 306 463 HOH HOH A . D 3 HOH 7 307 399 HOH HOH A . D 3 HOH 8 308 99 HOH HOH A . D 3 HOH 9 309 151 HOH HOH A . D 3 HOH 10 310 320 HOH HOH A . D 3 HOH 11 311 481 HOH HOH A . D 3 HOH 12 312 177 HOH HOH A . D 3 HOH 13 313 106 HOH HOH A . D 3 HOH 14 314 170 HOH HOH A . D 3 HOH 15 315 201 HOH HOH A . D 3 HOH 16 316 458 HOH HOH A . D 3 HOH 17 317 19 HOH HOH A . D 3 HOH 18 318 206 HOH HOH A . D 3 HOH 19 319 317 HOH HOH A . D 3 HOH 20 320 118 HOH HOH A . D 3 HOH 21 321 219 HOH HOH A . D 3 HOH 22 322 89 HOH HOH A . D 3 HOH 23 323 345 HOH HOH A . D 3 HOH 24 324 365 HOH HOH A . D 3 HOH 25 325 519 HOH HOH A . D 3 HOH 26 326 205 HOH HOH A . D 3 HOH 27 327 117 HOH HOH A . D 3 HOH 28 328 108 HOH HOH A . D 3 HOH 29 329 190 HOH HOH A . D 3 HOH 30 330 122 HOH HOH A . D 3 HOH 31 331 357 HOH HOH A . D 3 HOH 32 332 358 HOH HOH A . D 3 HOH 33 333 247 HOH HOH A . D 3 HOH 34 334 315 HOH HOH A . D 3 HOH 35 335 36 HOH HOH A . D 3 HOH 36 336 59 HOH HOH A . D 3 HOH 37 337 136 HOH HOH A . D 3 HOH 38 338 54 HOH HOH A . D 3 HOH 39 339 312 HOH HOH A . D 3 HOH 40 340 298 HOH HOH A . D 3 HOH 41 341 142 HOH HOH A . D 3 HOH 42 342 240 HOH HOH A . D 3 HOH 43 343 23 HOH HOH A . D 3 HOH 44 344 383 HOH HOH A . D 3 HOH 45 345 502 HOH HOH A . D 3 HOH 46 346 410 HOH HOH A . D 3 HOH 47 347 10 HOH HOH A . D 3 HOH 48 348 32 HOH HOH A . D 3 HOH 49 349 1 HOH HOH A . D 3 HOH 50 350 507 HOH HOH A . D 3 HOH 51 351 66 HOH HOH A . D 3 HOH 52 352 152 HOH HOH A . D 3 HOH 53 353 83 HOH HOH A . D 3 HOH 54 354 244 HOH HOH A . D 3 HOH 55 355 224 HOH HOH A . D 3 HOH 56 356 67 HOH HOH A . D 3 HOH 57 357 445 HOH HOH A . D 3 HOH 58 358 164 HOH HOH A . D 3 HOH 59 359 160 HOH HOH A . D 3 HOH 60 360 498 HOH HOH A . D 3 HOH 61 361 285 HOH HOH A . D 3 HOH 62 362 279 HOH HOH A . D 3 HOH 63 363 158 HOH HOH A . D 3 HOH 64 364 8 HOH HOH A . D 3 HOH 65 365 234 HOH HOH A . D 3 HOH 66 366 60 HOH HOH A . D 3 HOH 67 367 188 HOH HOH A . D 3 HOH 68 368 423 HOH HOH A . D 3 HOH 69 369 72 HOH HOH A . D 3 HOH 70 370 323 HOH HOH A . D 3 HOH 71 371 139 HOH HOH A . D 3 HOH 72 372 4 HOH HOH A . D 3 HOH 73 373 266 HOH HOH A . D 3 HOH 74 374 90 HOH HOH A . D 3 HOH 75 375 344 HOH HOH A . D 3 HOH 76 376 92 HOH HOH A . D 3 HOH 77 377 111 HOH HOH A . D 3 HOH 78 378 426 HOH HOH A . D 3 HOH 79 379 141 HOH HOH A . D 3 HOH 80 380 26 HOH HOH A . D 3 HOH 81 381 535 HOH HOH A . D 3 HOH 82 382 65 HOH HOH A . D 3 HOH 83 383 294 HOH HOH A . D 3 HOH 84 384 462 HOH HOH A . D 3 HOH 85 385 102 HOH HOH A . D 3 HOH 86 386 37 HOH HOH A . D 3 HOH 87 387 208 HOH HOH A . D 3 HOH 88 388 17 HOH HOH A . D 3 HOH 89 389 155 HOH HOH A . D 3 HOH 90 390 41 HOH HOH A . D 3 HOH 91 391 34 HOH HOH A . D 3 HOH 92 392 115 HOH HOH A . D 3 HOH 93 393 27 HOH HOH A . D 3 HOH 94 394 274 HOH HOH A . D 3 HOH 95 395 30 HOH HOH A . D 3 HOH 96 396 305 HOH HOH A . D 3 HOH 97 397 79 HOH HOH A . D 3 HOH 98 398 432 HOH HOH A . D 3 HOH 99 399 77 HOH HOH A . D 3 HOH 100 400 61 HOH HOH A . D 3 HOH 101 401 38 HOH HOH A . D 3 HOH 102 402 253 HOH HOH A . D 3 HOH 103 403 319 HOH HOH A . D 3 HOH 104 404 277 HOH HOH A . D 3 HOH 105 405 497 HOH HOH A . D 3 HOH 106 406 325 HOH HOH A . D 3 HOH 107 407 64 HOH HOH A . D 3 HOH 108 408 7 HOH HOH A . D 3 HOH 109 409 232 HOH HOH A . D 3 HOH 110 410 6 HOH HOH A . D 3 HOH 111 411 173 HOH HOH A . D 3 HOH 112 412 390 HOH HOH A . D 3 HOH 113 413 137 HOH HOH A . D 3 HOH 114 414 478 HOH HOH A . D 3 HOH 115 415 53 HOH HOH A . D 3 HOH 116 416 50 HOH HOH A . D 3 HOH 117 417 47 HOH HOH A . D 3 HOH 118 418 128 HOH HOH A . D 3 HOH 119 419 316 HOH HOH A . D 3 HOH 120 420 169 HOH HOH A . D 3 HOH 121 421 470 HOH HOH A . D 3 HOH 122 422 486 HOH HOH A . D 3 HOH 123 423 526 HOH HOH A . D 3 HOH 124 424 20 HOH HOH A . D 3 HOH 125 425 5 HOH HOH A . D 3 HOH 126 426 504 HOH HOH A . D 3 HOH 127 427 456 HOH HOH A . D 3 HOH 128 428 259 HOH HOH A . D 3 HOH 129 429 13 HOH HOH A . D 3 HOH 130 430 70 HOH HOH A . D 3 HOH 131 431 268 HOH HOH A . D 3 HOH 132 432 196 HOH HOH A . D 3 HOH 133 433 107 HOH HOH A . D 3 HOH 134 434 85 HOH HOH A . D 3 HOH 135 435 98 HOH HOH A . D 3 HOH 136 436 45 HOH HOH A . D 3 HOH 137 437 226 HOH HOH A . D 3 HOH 138 438 96 HOH HOH A . D 3 HOH 139 439 511 HOH HOH A . D 3 HOH 140 440 134 HOH HOH A . D 3 HOH 141 441 63 HOH HOH A . D 3 HOH 142 442 242 HOH HOH A . D 3 HOH 143 443 222 HOH HOH A . D 3 HOH 144 444 286 HOH HOH A . D 3 HOH 145 445 207 HOH HOH A . D 3 HOH 146 446 404 HOH HOH A . D 3 HOH 147 447 395 HOH HOH A . D 3 HOH 148 448 420 HOH HOH A . D 3 HOH 149 449 434 HOH HOH A . D 3 HOH 150 450 398 HOH HOH A . D 3 HOH 151 451 220 HOH HOH A . D 3 HOH 152 452 93 HOH HOH A . D 3 HOH 153 453 500 HOH HOH A . D 3 HOH 154 454 149 HOH HOH A . D 3 HOH 155 455 245 HOH HOH A . D 3 HOH 156 456 397 HOH HOH A . D 3 HOH 157 457 272 HOH HOH A . D 3 HOH 158 458 474 HOH HOH A . D 3 HOH 159 459 414 HOH HOH A . D 3 HOH 160 460 343 HOH HOH A . D 3 HOH 161 461 236 HOH HOH A . D 3 HOH 162 462 104 HOH HOH A . D 3 HOH 163 463 42 HOH HOH A . D 3 HOH 164 464 11 HOH HOH A . D 3 HOH 165 465 74 HOH HOH A . D 3 HOH 166 466 95 HOH HOH A . D 3 HOH 167 467 361 HOH HOH A . D 3 HOH 168 468 392 HOH HOH A . D 3 HOH 169 469 91 HOH HOH A . D 3 HOH 170 470 329 HOH HOH A . D 3 HOH 171 471 427 HOH HOH A . D 3 HOH 172 472 126 HOH HOH A . D 3 HOH 173 473 130 HOH HOH A . D 3 HOH 174 474 332 HOH HOH A . D 3 HOH 175 475 484 HOH HOH A . D 3 HOH 176 476 396 HOH HOH A . D 3 HOH 177 477 328 HOH HOH A . D 3 HOH 178 478 252 HOH HOH A . D 3 HOH 179 479 355 HOH HOH A . D 3 HOH 180 480 452 HOH HOH A . D 3 HOH 181 481 368 HOH HOH A . D 3 HOH 182 482 309 HOH HOH A . D 3 HOH 183 483 532 HOH HOH A . D 3 HOH 184 484 544 HOH HOH A . D 3 HOH 185 485 393 HOH HOH A . D 3 HOH 186 486 204 HOH HOH A . D 3 HOH 187 487 112 HOH HOH A . D 3 HOH 188 488 538 HOH HOH A . D 3 HOH 189 489 528 HOH HOH A . D 3 HOH 190 490 517 HOH HOH A . D 3 HOH 191 491 522 HOH HOH A . D 3 HOH 192 492 233 HOH HOH A . D 3 HOH 193 493 363 HOH HOH A . D 3 HOH 194 494 1 HOH HOH A . D 3 HOH 195 495 276 HOH HOH A . D 3 HOH 196 496 487 HOH HOH A . D 3 HOH 197 497 153 HOH HOH A . D 3 HOH 198 498 326 HOH HOH A . D 3 HOH 199 499 231 HOH HOH A . D 3 HOH 200 500 121 HOH HOH A . D 3 HOH 201 501 256 HOH HOH A . D 3 HOH 202 502 275 HOH HOH A . D 3 HOH 203 503 489 HOH HOH A . D 3 HOH 204 504 322 HOH HOH A . D 3 HOH 205 505 69 HOH HOH A . D 3 HOH 206 506 162 HOH HOH A . D 3 HOH 207 507 406 HOH HOH A . D 3 HOH 208 508 459 HOH HOH A . D 3 HOH 209 509 215 HOH HOH A . D 3 HOH 210 510 523 HOH HOH A . D 3 HOH 211 511 302 HOH HOH A . D 3 HOH 212 512 225 HOH HOH A . D 3 HOH 213 513 330 HOH HOH A . D 3 HOH 214 514 431 HOH HOH A . D 3 HOH 215 515 295 HOH HOH A . D 3 HOH 216 516 409 HOH HOH A . D 3 HOH 217 517 436 HOH HOH A . D 3 HOH 218 518 547 HOH HOH A . D 3 HOH 219 519 262 HOH HOH A . D 3 HOH 220 520 331 HOH HOH A . D 3 HOH 221 521 524 HOH HOH A . D 3 HOH 222 522 490 HOH HOH A . D 3 HOH 223 523 475 HOH HOH A . D 3 HOH 224 524 518 HOH HOH A . D 3 HOH 225 525 533 HOH HOH A . D 3 HOH 226 526 339 HOH HOH A . D 3 HOH 227 527 506 HOH HOH A . D 3 HOH 228 528 530 HOH HOH A . D 3 HOH 229 529 97 HOH HOH A . D 3 HOH 230 530 437 HOH HOH A . D 3 HOH 231 531 167 HOH HOH A . D 3 HOH 232 532 313 HOH HOH A . D 3 HOH 233 533 238 HOH HOH A . D 3 HOH 234 534 400 HOH HOH A . D 3 HOH 235 535 375 HOH HOH A . D 3 HOH 236 536 455 HOH HOH A . D 3 HOH 237 537 419 HOH HOH A . D 3 HOH 238 538 299 HOH HOH A . D 3 HOH 239 539 132 HOH HOH A . D 3 HOH 240 540 292 HOH HOH A . D 3 HOH 241 541 433 HOH HOH A . D 3 HOH 242 542 287 HOH HOH A . D 3 HOH 243 543 529 HOH HOH A . D 3 HOH 244 544 273 HOH HOH A . D 3 HOH 245 545 138 HOH HOH A . D 3 HOH 246 546 306 HOH HOH A . D 3 HOH 247 547 261 HOH HOH A . D 3 HOH 248 548 257 HOH HOH A . D 3 HOH 249 549 282 HOH HOH A . D 3 HOH 250 550 185 HOH HOH A . D 3 HOH 251 551 372 HOH HOH A . D 3 HOH 252 552 227 HOH HOH A . D 3 HOH 253 553 189 HOH HOH A . D 3 HOH 254 554 540 HOH HOH A . D 3 HOH 255 555 468 HOH HOH A . D 3 HOH 256 556 271 HOH HOH A . D 3 HOH 257 557 280 HOH HOH A . D 3 HOH 258 558 362 HOH HOH A . D 3 HOH 259 559 545 HOH HOH A . D 3 HOH 260 560 416 HOH HOH A . D 3 HOH 261 561 415 HOH HOH A . D 3 HOH 262 562 178 HOH HOH A . D 3 HOH 263 563 542 HOH HOH A . E 3 HOH 1 201 86 HOH HOH B . E 3 HOH 2 202 389 HOH HOH B . E 3 HOH 3 203 348 HOH HOH B . E 3 HOH 4 204 293 HOH HOH B . E 3 HOH 5 205 318 HOH HOH B . E 3 HOH 6 206 354 HOH HOH B . E 3 HOH 7 207 239 HOH HOH B . E 3 HOH 8 208 388 HOH HOH B . E 3 HOH 9 209 360 HOH HOH B . E 3 HOH 10 210 508 HOH HOH B . E 3 HOH 11 211 289 HOH HOH B . E 3 HOH 12 212 483 HOH HOH B . E 3 HOH 13 213 353 HOH HOH B . E 3 HOH 14 214 417 HOH HOH B . E 3 HOH 15 215 186 HOH HOH B . E 3 HOH 16 216 370 HOH HOH B . E 3 HOH 17 217 411 HOH HOH B . E 3 HOH 18 218 441 HOH HOH B . E 3 HOH 19 219 133 HOH HOH B . E 3 HOH 20 220 494 HOH HOH B . E 3 HOH 21 221 87 HOH HOH B . E 3 HOH 22 222 265 HOH HOH B . E 3 HOH 23 223 124 HOH HOH B . E 3 HOH 24 224 131 HOH HOH B . E 3 HOH 25 225 71 HOH HOH B . E 3 HOH 26 226 534 HOH HOH B . E 3 HOH 27 227 515 HOH HOH B . E 3 HOH 28 228 254 HOH HOH B . E 3 HOH 29 229 352 HOH HOH B . E 3 HOH 30 230 145 HOH HOH B . E 3 HOH 31 231 57 HOH HOH B . E 3 HOH 32 232 44 HOH HOH B . E 3 HOH 33 233 378 HOH HOH B . E 3 HOH 34 234 150 HOH HOH B . E 3 HOH 35 235 179 HOH HOH B . E 3 HOH 36 236 147 HOH HOH B . E 3 HOH 37 237 466 HOH HOH B . E 3 HOH 38 238 223 HOH HOH B . E 3 HOH 39 239 43 HOH HOH B . E 3 HOH 40 240 367 HOH HOH B . E 3 HOH 41 241 146 HOH HOH B . E 3 HOH 42 242 154 HOH HOH B . E 3 HOH 43 243 421 HOH HOH B . E 3 HOH 44 244 301 HOH HOH B . E 3 HOH 45 245 127 HOH HOH B . E 3 HOH 46 246 197 HOH HOH B . E 3 HOH 47 247 369 HOH HOH B . E 3 HOH 48 248 384 HOH HOH B . E 3 HOH 49 249 62 HOH HOH B . E 3 HOH 50 250 180 HOH HOH B . E 3 HOH 51 251 440 HOH HOH B . E 3 HOH 52 252 471 HOH HOH B . E 3 HOH 53 253 264 HOH HOH B . E 3 HOH 54 254 143 HOH HOH B . E 3 HOH 55 255 349 HOH HOH B . E 3 HOH 56 256 25 HOH HOH B . E 3 HOH 57 257 105 HOH HOH B . E 3 HOH 58 258 3 HOH HOH B . E 3 HOH 59 259 135 HOH HOH B . E 3 HOH 60 260 129 HOH HOH B . E 3 HOH 61 261 376 HOH HOH B . E 3 HOH 62 262 212 HOH HOH B . E 3 HOH 63 263 88 HOH HOH B . E 3 HOH 64 264 56 HOH HOH B . E 3 HOH 65 265 49 HOH HOH B . E 3 HOH 66 266 39 HOH HOH B . E 3 HOH 67 267 9 HOH HOH B . E 3 HOH 68 268 198 HOH HOH B . E 3 HOH 69 269 78 HOH HOH B . E 3 HOH 70 270 172 HOH HOH B . E 3 HOH 71 271 491 HOH HOH B . E 3 HOH 72 272 168 HOH HOH B . E 3 HOH 73 273 493 HOH HOH B . E 3 HOH 74 274 297 HOH HOH B . E 3 HOH 75 275 2 HOH HOH B . E 3 HOH 76 276 307 HOH HOH B . E 3 HOH 77 277 29 HOH HOH B . E 3 HOH 78 278 81 HOH HOH B . E 3 HOH 79 279 15 HOH HOH B . E 3 HOH 80 280 12 HOH HOH B . E 3 HOH 81 281 31 HOH HOH B . E 3 HOH 82 282 181 HOH HOH B . E 3 HOH 83 283 33 HOH HOH B . E 3 HOH 84 284 430 HOH HOH B . E 3 HOH 85 285 539 HOH HOH B . E 3 HOH 86 286 214 HOH HOH B . E 3 HOH 87 287 52 HOH HOH B . E 3 HOH 88 288 76 HOH HOH B . E 3 HOH 89 289 209 HOH HOH B . E 3 HOH 90 290 476 HOH HOH B . E 3 HOH 91 291 229 HOH HOH B . E 3 HOH 92 292 109 HOH HOH B . E 3 HOH 93 293 284 HOH HOH B . E 3 HOH 94 294 140 HOH HOH B . E 3 HOH 95 295 159 HOH HOH B . E 3 HOH 96 296 116 HOH HOH B . E 3 HOH 97 297 281 HOH HOH B . E 3 HOH 98 298 16 HOH HOH B . E 3 HOH 99 299 246 HOH HOH B . E 3 HOH 100 300 119 HOH HOH B . E 3 HOH 101 301 314 HOH HOH B . E 3 HOH 102 302 114 HOH HOH B . E 3 HOH 103 303 28 HOH HOH B . E 3 HOH 104 304 327 HOH HOH B . E 3 HOH 105 305 347 HOH HOH B . E 3 HOH 106 306 435 HOH HOH B . E 3 HOH 107 307 58 HOH HOH B . E 3 HOH 108 308 18 HOH HOH B . E 3 HOH 109 309 100 HOH HOH B . E 3 HOH 110 310 166 HOH HOH B . E 3 HOH 111 311 176 HOH HOH B . E 3 HOH 112 312 341 HOH HOH B . E 3 HOH 113 313 260 HOH HOH B . E 3 HOH 114 314 35 HOH HOH B . E 3 HOH 115 315 496 HOH HOH B . E 3 HOH 116 316 512 HOH HOH B . E 3 HOH 117 317 182 HOH HOH B . E 3 HOH 118 318 144 HOH HOH B . E 3 HOH 119 319 187 HOH HOH B . E 3 HOH 120 320 80 HOH HOH B . E 3 HOH 121 321 14 HOH HOH B . E 3 HOH 122 322 120 HOH HOH B . E 3 HOH 123 323 51 HOH HOH B . E 3 HOH 124 324 203 HOH HOH B . E 3 HOH 125 325 237 HOH HOH B . E 3 HOH 126 326 248 HOH HOH B . E 3 HOH 127 327 24 HOH HOH B . E 3 HOH 128 328 200 HOH HOH B . E 3 HOH 129 329 537 HOH HOH B . E 3 HOH 130 330 195 HOH HOH B . E 3 HOH 131 331 218 HOH HOH B . E 3 HOH 132 332 113 HOH HOH B . E 3 HOH 133 333 125 HOH HOH B . E 3 HOH 134 334 22 HOH HOH B . E 3 HOH 135 335 210 HOH HOH B . E 3 HOH 136 336 243 HOH HOH B . E 3 HOH 137 337 46 HOH HOH B . E 3 HOH 138 338 82 HOH HOH B . E 3 HOH 139 339 211 HOH HOH B . E 3 HOH 140 340 110 HOH HOH B . E 3 HOH 141 341 75 HOH HOH B . E 3 HOH 142 342 249 HOH HOH B . E 3 HOH 143 343 283 HOH HOH B . E 3 HOH 144 344 21 HOH HOH B . E 3 HOH 145 345 230 HOH HOH B . E 3 HOH 146 346 304 HOH HOH B . E 3 HOH 147 347 451 HOH HOH B . E 3 HOH 148 348 241 HOH HOH B . E 3 HOH 149 349 374 HOH HOH B . E 3 HOH 150 350 194 HOH HOH B . E 3 HOH 151 351 469 HOH HOH B . E 3 HOH 152 352 68 HOH HOH B . E 3 HOH 153 353 308 HOH HOH B . E 3 HOH 154 354 311 HOH HOH B . E 3 HOH 155 355 48 HOH HOH B . E 3 HOH 156 356 55 HOH HOH B . E 3 HOH 157 357 350 HOH HOH B . E 3 HOH 158 358 482 HOH HOH B . E 3 HOH 159 359 103 HOH HOH B . E 3 HOH 160 360 439 HOH HOH B . E 3 HOH 161 361 40 HOH HOH B . E 3 HOH 162 362 379 HOH HOH B . E 3 HOH 163 363 193 HOH HOH B . E 3 HOH 164 364 510 HOH HOH B . E 3 HOH 165 365 377 HOH HOH B . E 3 HOH 166 366 251 HOH HOH B . E 3 HOH 167 367 386 HOH HOH B . E 3 HOH 168 368 258 HOH HOH B . E 3 HOH 169 369 199 HOH HOH B . E 3 HOH 170 370 303 HOH HOH B . E 3 HOH 171 371 381 HOH HOH B . E 3 HOH 172 372 509 HOH HOH B . E 3 HOH 173 373 101 HOH HOH B . E 3 HOH 174 374 221 HOH HOH B . E 3 HOH 175 375 501 HOH HOH B . E 3 HOH 176 376 324 HOH HOH B . E 3 HOH 177 377 290 HOH HOH B . E 3 HOH 178 378 457 HOH HOH B . E 3 HOH 179 379 175 HOH HOH B . E 3 HOH 180 380 546 HOH HOH B . E 3 HOH 181 381 438 HOH HOH B . E 3 HOH 182 382 408 HOH HOH B . E 3 HOH 183 383 382 HOH HOH B . E 3 HOH 184 384 492 HOH HOH B . E 3 HOH 185 385 174 HOH HOH B . E 3 HOH 186 386 516 HOH HOH B . E 3 HOH 187 387 450 HOH HOH B . E 3 HOH 188 388 202 HOH HOH B . E 3 HOH 189 389 403 HOH HOH B . E 3 HOH 190 390 531 HOH HOH B . E 3 HOH 191 391 216 HOH HOH B . E 3 HOH 192 392 391 HOH HOH B . E 3 HOH 193 393 429 HOH HOH B . E 3 HOH 194 394 444 HOH HOH B . E 3 HOH 195 395 340 HOH HOH B . E 3 HOH 196 396 336 HOH HOH B . E 3 HOH 197 397 269 HOH HOH B . E 3 HOH 198 398 472 HOH HOH B . E 3 HOH 199 399 94 HOH HOH B . E 3 HOH 200 400 422 HOH HOH B . E 3 HOH 201 401 485 HOH HOH B . E 3 HOH 202 402 465 HOH HOH B . E 3 HOH 203 403 505 HOH HOH B . E 3 HOH 204 404 413 HOH HOH B . E 3 HOH 205 405 296 HOH HOH B . E 3 HOH 206 406 342 HOH HOH B . E 3 HOH 207 407 338 HOH HOH B . E 3 HOH 208 408 514 HOH HOH B . E 3 HOH 209 409 270 HOH HOH B . E 3 HOH 210 410 520 HOH HOH B . E 3 HOH 211 411 364 HOH HOH B . E 3 HOH 212 412 467 HOH HOH B . E 3 HOH 213 413 255 HOH HOH B . E 3 HOH 214 414 477 HOH HOH B . E 3 HOH 215 415 443 HOH HOH B . E 3 HOH 216 416 337 HOH HOH B . E 3 HOH 217 417 412 HOH HOH B . E 3 HOH 218 418 454 HOH HOH B . E 3 HOH 219 419 250 HOH HOH B . E 3 HOH 220 420 183 HOH HOH B . E 3 HOH 221 421 536 HOH HOH B . E 3 HOH 222 422 446 HOH HOH B . E 3 HOH 223 423 191 HOH HOH B . E 3 HOH 224 424 479 HOH HOH B . E 3 HOH 225 425 543 HOH HOH B . E 3 HOH 226 426 346 HOH HOH B . E 3 HOH 227 427 461 HOH HOH B . E 3 HOH 228 428 351 HOH HOH B . E 3 HOH 229 429 366 HOH HOH B . E 3 HOH 230 430 424 HOH HOH B . E 3 HOH 231 431 460 HOH HOH B . E 3 HOH 232 432 464 HOH HOH B . E 3 HOH 233 433 165 HOH HOH B . E 3 HOH 234 434 425 HOH HOH B . E 3 HOH 235 435 447 HOH HOH B . E 3 HOH 236 436 527 HOH HOH B . E 3 HOH 237 437 334 HOH HOH B . E 3 HOH 238 438 453 HOH HOH B . E 3 HOH 239 439 503 HOH HOH B . E 3 HOH 240 440 163 HOH HOH B . E 3 HOH 241 441 278 HOH HOH B . E 3 HOH 242 442 335 HOH HOH B . E 3 HOH 243 443 387 HOH HOH B . E 3 HOH 244 444 157 HOH HOH B . E 3 HOH 245 445 442 HOH HOH B . E 3 HOH 246 446 418 HOH HOH B . E 3 HOH 247 447 217 HOH HOH B . E 3 HOH 248 448 480 HOH HOH B . E 3 HOH 249 449 402 HOH HOH B . E 3 HOH 250 450 371 HOH HOH B . E 3 HOH 251 451 380 HOH HOH B . E 3 HOH 252 452 428 HOH HOH B . E 3 HOH 253 453 407 HOH HOH B . E 3 HOH 254 454 184 HOH HOH B . E 3 HOH 255 455 473 HOH HOH B . E 3 HOH 256 456 291 HOH HOH B . E 3 HOH 257 457 171 HOH HOH B . E 3 HOH 258 458 385 HOH HOH B . E 3 HOH 259 459 521 HOH HOH B . E 3 HOH 260 460 513 HOH HOH B . E 3 HOH 261 461 192 HOH HOH B . E 3 HOH 262 462 321 HOH HOH B . E 3 HOH 263 463 359 HOH HOH B . E 3 HOH 264 464 123 HOH HOH B . E 3 HOH 265 465 405 HOH HOH B . E 3 HOH 266 466 300 HOH HOH B . E 3 HOH 267 467 499 HOH HOH B . E 3 HOH 268 468 394 HOH HOH B . E 3 HOH 269 469 235 HOH HOH B . E 3 HOH 270 470 263 HOH HOH B . E 3 HOH 271 471 333 HOH HOH B . E 3 HOH 272 472 541 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D 2 1 B,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-12-16 2 'Structure model' 1 1 2021-01-27 3 'Structure model' 1 2 2021-05-12 4 'Structure model' 1 3 2021-06-09 5 'Structure model' 1 4 2022-05-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' 'Structure summary' 4 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' entity 2 2 'Structure model' entity_name_com 3 3 'Structure model' pdbx_deposit_group 4 4 'Structure model' struct 5 5 'Structure model' citation 6 5 'Structure model' citation_author 7 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_entity.pdbx_ec' 2 2 'Structure model' '_entity_name_com.name' 3 3 'Structure model' '_pdbx_deposit_group.group_description' 4 3 'Structure model' '_pdbx_deposit_group.group_type' 5 4 'Structure model' '_struct.title' 6 5 'Structure model' '_citation.country' 7 5 'Structure model' '_citation.journal_abbrev' 8 5 'Structure model' '_citation.journal_id_CSD' 9 5 'Structure model' '_citation.journal_id_ISSN' 10 5 'Structure model' '_citation.journal_volume' 11 5 'Structure model' '_citation.pdbx_database_id_DOI' 12 5 'Structure model' '_citation.pdbx_database_id_PubMed' 13 5 'Structure model' '_citation.title' 14 5 'Structure model' '_citation.year' 15 5 'Structure model' '_database_2.pdbx_DOI' 16 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 PHENIX 1.18.2_3874 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 3 PDB_EXTRACT 3.25 'Apr. 1, 2019' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 XDS 0.94 'Mar. 16, 2020' package 'Wolfgang Kabsch' Wolfgang.Kabsch@mpimf-heidelberg.mpg.de 'data reduction' http://xds.mpimf-heidelberg.mpg.de ? ? 5 PHASER 2.8.3 'May 17, 2020' package 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing https://www.phaser.cimr.cam.ac.uk/index.php/Phaser_Crystallographic_Software ? ? # _pdbx_entry_details.entry_id 5RU7 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 504 ? ? O A HOH 524 ? ? 1.80 2 1 O A HOH 321 ? ? O A HOH 381 ? ? 1.81 3 1 O B HOH 415 ? ? O B HOH 459 ? ? 1.83 4 1 O A HOH 327 ? ? O B HOH 248 ? ? 1.84 5 1 O A HOH 457 ? ? O A HOH 485 ? ? 1.85 6 1 O B HOH 223 ? ? O B HOH 291 ? ? 1.85 7 1 O B HOH 329 ? ? O B HOH 421 ? ? 1.85 8 1 O A HOH 383 ? ? O A HOH 456 ? ? 1.86 9 1 O A HOH 470 ? ? O A HOH 498 ? ? 1.89 10 1 O B HOH 229 ? ? O B HOH 274 ? ? 1.91 11 1 O A HOH 311 ? ? O A HOH 312 ? ? 1.93 12 1 O B HOH 247 ? ? O B HOH 414 ? ? 1.94 13 1 O B HOH 271 ? ? O B HOH 446 ? ? 1.99 14 1 "N1'" A PYD 201 ? A O A HOH 301 ? ? 2.02 15 1 O B HOH 369 ? ? O B HOH 371 ? ? 2.05 16 1 O A HOH 446 ? ? O A HOH 484 ? ? 2.07 17 1 O B HOH 351 ? ? O B HOH 366 ? ? 2.13 18 1 O A HOH 427 ? ? O A HOH 470 ? ? 2.15 19 1 O B HOH 415 ? ? O B HOH 431 ? ? 2.18 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 479 ? ? 1_555 O B HOH 369 ? ? 2_454 1.69 2 1 O B HOH 348 ? ? 1_555 O B HOH 410 ? ? 1_554 1.89 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD A GLU 26 ? ? OE2 A GLU 26 ? ? 1.173 1.252 -0.079 0.011 N 2 1 CE1 A HIS 119 ? ? NE2 A HIS 119 ? ? 1.249 1.317 -0.068 0.011 N 3 1 CD B GLU 26 ? ? OE2 B GLU 26 ? ? 1.167 1.252 -0.085 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 141 ? ? CZ A ARG 141 ? ? NH1 A ARG 141 ? ? 114.50 120.30 -5.80 0.50 N 2 1 NE A ARG 141 ? ? CZ A ARG 141 ? ? NH2 A ARG 141 ? ? 125.45 120.30 5.15 0.50 N 3 1 NE A ARG 148 ? ? CZ A ARG 148 ? ? NH1 A ARG 148 ? ? 116.35 120.30 -3.95 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 86 ? ? 53.91 -132.49 2 1 HIS B 86 ? ? 57.02 -128.04 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 563 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.72 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 29 ? CG ? A LYS 29 CG 2 1 Y 1 A LYS 29 ? CD ? A LYS 29 CD 3 1 Y 1 A LYS 29 ? CE ? A LYS 29 CE 4 1 Y 1 A LYS 29 ? NZ ? A LYS 29 NZ 5 1 Y 1 A LEU 169 ? CG ? A LEU 169 CG 6 1 Y 1 A LEU 169 ? CD1 ? A LEU 169 CD1 7 1 Y 1 A LEU 169 ? CD2 ? A LEU 169 CD2 8 1 Y 1 B LYS 29 ? CG ? B LYS 29 CG 9 1 Y 1 B LYS 29 ? CD ? B LYS 29 CD 10 1 Y 1 B LYS 29 ? CE ? B LYS 29 CE 11 1 Y 1 B LYS 29 ? NZ ? B LYS 29 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 1 ? A SER 1 2 1 Y 1 A MET 2 ? A MET 2 # _pdbx_audit_support.funding_organization 'National Science Foundation' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 2031205 _pdbx_audit_support.ordinal 1 # _pdbx_deposit_group.group_title 'PanDDA analysis group deposition of SARS-CoV-2 NSP3 macrodomain fragment screen' _pdbx_deposit_group.group_description ;SARS-CoV-2 NSP3 macrodomain from SARS-CoV-2 screened against the Enamine Essential fragment library (Enamine) and the UCSF_91 fragment library (UCSF) by X-ray Crystallography at UCSF using ALS 8.3.1, SSRL 12-1 and 12-2 and NSLS-II 17-ID-2 ; _pdbx_deposit_group.group_id G_1002171 _pdbx_deposit_group.group_type 'changed state' # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id PYD _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id PYD _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2,5-DIMETHYL-PYRIMIDIN-4-YLAMINE PYD 3 water HOH #