data_5S2A # _entry.id 5S2A # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.358 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5S2A pdb_00005s2a 10.2210/pdb5s2a/pdb WWPDB D_1001403967 ? ? # _pdbx_database_status.entry_id 5S2A _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.recvd_initial_deposition_date 2020-11-02 _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fearon, D.' 1 'Schuller, M.' 2 'Rangel, V.L.' 3 'Douangamath, A.' 4 'Rack, J.G.M.' 5 'Zhu, K.' 6 'Aimon, A.' 7 'Brandao-Neto, J.' 8 'Dias, A.' 9 'Dunnet, L.' 10 'Gorrie-Stone, T.J.' 11 'Powell, A.J.' 12 'Krojer, T.' 13 'Skyner, R.' 14 'Thompson, W.' 15 'Ahel, I.' 16 'von Delft, F.' 17 # _citation.id primary _citation.title 'Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking.' _citation.journal_abbrev 'Sci Adv' _citation.journal_volume 7 _citation.page_first ? _citation.page_last ? _citation.year 2021 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 2375-2548 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 33853786 _citation.pdbx_database_id_DOI 10.1126/sciadv.abf8711 # loop_ _citation_author.citation_id _citation_author.name _citation_author.identifier_ORCID _citation_author.ordinal primary 'Schuller, M.' 0000-0002-1551-0359 1 primary 'Correy, G.J.' 0000-0001-5155-7325 2 primary 'Gahbauer, S.' 0000-0002-3115-9757 3 primary 'Fearon, D.' 0000-0003-3529-7863 4 primary 'Wu, T.' 0000-0001-6988-1414 5 primary 'Diaz, R.E.' 0000-0002-1172-9919 6 primary 'Young, I.D.' 0000-0003-4713-9504 7 primary 'Carvalho Martins, L.' 0000-0002-7747-6782 8 primary 'Smith, D.H.' 0000-0002-5136-4491 9 primary 'Schulze-Gahmen, U.' 0000-0003-3919-4474 10 primary 'Owens, T.W.' 0000-0001-7423-4879 11 primary 'Deshpande, I.' 0000-0002-8276-9635 12 primary 'Merz, G.E.' 0000-0003-0842-4935 13 primary 'Thwin, A.C.' 0000-0002-1423-8189 14 primary 'Biel, J.T.' 0000-0002-0935-8362 15 primary 'Peters, J.K.' 0000-0003-3541-7431 16 primary 'Moritz, M.' 0000-0003-3811-5623 17 primary 'Herrera, N.' 0000-0003-4157-9429 18 primary 'Kratochvil, H.T.' 0000-0001-8039-6823 19 primary 'Aimon, A.' 0000-0002-9135-129X 20 primary 'Bennett, J.M.' 0000-0003-1396-8400 21 primary 'Brandao Neto, J.' 0000-0001-6015-320X 22 primary 'Cohen, A.E.' 0000-0003-2414-9427 23 primary 'Dias, A.' 0000-0003-3609-7003 24 primary 'Douangamath, A.' ? 25 primary 'Dunnett, L.' 0000-0001-6710-6959 26 primary 'Fedorov, O.' 0000-0002-8662-7300 27 primary 'Ferla, M.P.' ? 28 primary 'Fuchs, M.R.' 0000-0001-9784-0927 29 primary 'Gorrie-Stone, T.J.' 0000-0002-1817-1495 30 primary 'Holton, J.M.' 0000-0002-0596-0137 31 primary 'Johnson, M.G.' 0000-0001-9213-0598 32 primary 'Krojer, T.' 0000-0003-0661-0814 33 primary 'Meigs, G.' 0000-0002-8530-661X 34 primary 'Powell, A.J.' 0000-0002-0462-2240 35 primary 'Rack, J.G.M.' 0000-0001-8341-6439 36 primary 'Rangel, V.L.' 0000-0002-7580-3452 37 primary 'Russi, S.' ? 38 primary 'Skyner, R.E.' 0000-0003-3614-6661 39 primary 'Smith, C.A.' 0000-0002-1885-1511 40 primary 'Soares, A.S.' 0000-0002-6565-8503 41 primary 'Wierman, J.L.' 0000-0002-5206-9662 42 primary 'Zhu, K.' ? 43 primary ;O'Brien, P. ; 0000-0002-9966-1962 44 primary 'Jura, N.' 0000-0001-5129-641X 45 primary 'Ashworth, A.' 0000-0003-1446-7878 46 primary 'Irwin, J.J.' 0000-0002-1195-6417 47 primary 'Thompson, M.C.' 0000-0002-6099-2027 48 primary 'Gestwicki, J.E.' ? 49 primary 'von Delft, F.' 0000-0003-0378-0017 50 primary 'Shoichet, B.K.' 0000-0002-6098-7367 51 primary 'Fraser, J.S.' 0000-0002-5080-2859 52 primary 'Ahel, I.' 0000-0002-9446-3756 53 # _cell.entry_id 5S2A _cell.length_a 88.217 _cell.length_b 88.217 _cell.length_c 39.079 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5S2A _symmetry.space_group_name_H-M 'P 43' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Non-structural protein 3' 18178.766 2 '3.4.19.121, 3.4.22.-' ? ? ? 2 non-polymer syn 'N-(4-hydroxyphenyl)-1-methyl-1H-pyrazole-4-carboxamide' 217.224 1 ? ? ? ? 3 water nat water 18.015 409 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Nsp3,PL2-PRO,Papain-like protease,Papain-like proteinase,PL-PRO' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGS CVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNL YDKLVSSFL ; _entity_poly.pdbx_seq_one_letter_code_can ;SMVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGS CVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNL YDKLVSSFL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 VAL n 1 4 ASN n 1 5 SER n 1 6 PHE n 1 7 SER n 1 8 GLY n 1 9 TYR n 1 10 LEU n 1 11 LYS n 1 12 LEU n 1 13 THR n 1 14 ASP n 1 15 ASN n 1 16 VAL n 1 17 TYR n 1 18 ILE n 1 19 LYS n 1 20 ASN n 1 21 ALA n 1 22 ASP n 1 23 ILE n 1 24 VAL n 1 25 GLU n 1 26 GLU n 1 27 ALA n 1 28 LYS n 1 29 LYS n 1 30 VAL n 1 31 LYS n 1 32 PRO n 1 33 THR n 1 34 VAL n 1 35 VAL n 1 36 VAL n 1 37 ASN n 1 38 ALA n 1 39 ALA n 1 40 ASN n 1 41 VAL n 1 42 TYR n 1 43 LEU n 1 44 LYS n 1 45 HIS n 1 46 GLY n 1 47 GLY n 1 48 GLY n 1 49 VAL n 1 50 ALA n 1 51 GLY n 1 52 ALA n 1 53 LEU n 1 54 ASN n 1 55 LYS n 1 56 ALA n 1 57 THR n 1 58 ASN n 1 59 ASN n 1 60 ALA n 1 61 MET n 1 62 GLN n 1 63 VAL n 1 64 GLU n 1 65 SER n 1 66 ASP n 1 67 ASP n 1 68 TYR n 1 69 ILE n 1 70 ALA n 1 71 THR n 1 72 ASN n 1 73 GLY n 1 74 PRO n 1 75 LEU n 1 76 LYS n 1 77 VAL n 1 78 GLY n 1 79 GLY n 1 80 SER n 1 81 CYS n 1 82 VAL n 1 83 LEU n 1 84 SER n 1 85 GLY n 1 86 HIS n 1 87 ASN n 1 88 LEU n 1 89 ALA n 1 90 LYS n 1 91 HIS n 1 92 CYS n 1 93 LEU n 1 94 HIS n 1 95 VAL n 1 96 VAL n 1 97 GLY n 1 98 PRO n 1 99 ASN n 1 100 VAL n 1 101 ASN n 1 102 LYS n 1 103 GLY n 1 104 GLU n 1 105 ASP n 1 106 ILE n 1 107 GLN n 1 108 LEU n 1 109 LEU n 1 110 LYS n 1 111 SER n 1 112 ALA n 1 113 TYR n 1 114 GLU n 1 115 ASN n 1 116 PHE n 1 117 ASN n 1 118 GLN n 1 119 HIS n 1 120 GLU n 1 121 VAL n 1 122 LEU n 1 123 LEU n 1 124 ALA n 1 125 PRO n 1 126 LEU n 1 127 LEU n 1 128 SER n 1 129 ALA n 1 130 GLY n 1 131 ILE n 1 132 PHE n 1 133 GLY n 1 134 ALA n 1 135 ASP n 1 136 PRO n 1 137 ILE n 1 138 HIS n 1 139 SER n 1 140 LEU n 1 141 ARG n 1 142 VAL n 1 143 CYS n 1 144 VAL n 1 145 ASP n 1 146 THR n 1 147 VAL n 1 148 ARG n 1 149 THR n 1 150 ASN n 1 151 VAL n 1 152 TYR n 1 153 LEU n 1 154 ALA n 1 155 VAL n 1 156 PHE n 1 157 ASP n 1 158 LYS n 1 159 ASN n 1 160 LEU n 1 161 TYR n 1 162 ASP n 1 163 LYS n 1 164 LEU n 1 165 VAL n 1 166 SER n 1 167 SER n 1 168 PHE n 1 169 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 169 _entity_src_gen.gene_src_common_name 2019-nCoV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'rep, 1a-1b' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Severe acute respiratory syndrome coronavirus 2' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2697049 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code R1AB_SARS2 _struct_ref.pdbx_db_accession P0DTD1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCV LSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYD KLVSSFL ; _struct_ref.pdbx_align_begin 1025 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5S2A A 3 ? 169 ? P0DTD1 1025 ? 1191 ? 3 169 2 1 5S2A B 3 ? 169 ? P0DTD1 1025 ? 1191 ? 3 169 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5S2A SER A 1 ? UNP P0DTD1 ? ? 'expression tag' 1 1 1 5S2A MET A 2 ? UNP P0DTD1 ? ? 'expression tag' 2 2 2 5S2A SER B 1 ? UNP P0DTD1 ? ? 'expression tag' 1 3 2 5S2A MET B 2 ? UNP P0DTD1 ? ? 'expression tag' 2 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 WS4 non-polymer . 'N-(4-hydroxyphenyl)-1-methyl-1H-pyrazole-4-carboxamide' ? 'C11 H11 N3 O2' 217.224 # _exptl.crystals_number 1 _exptl.entry_id 5S2A _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 0.000 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.09 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 41.18 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 0.1 _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.pdbx_details '30% PEG 3K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.crystal_id 1 _diffrn.ambient_temp_details ? # _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2020-07-21 _diffrn_detector.diffrn_id 1 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91257 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04-1' _diffrn_source.pdbx_wavelength_list 0.91257 _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04-1 _diffrn_source.pdbx_wavelength ? # _reflns.entry_id 5S2A _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 62.390 _reflns.d_resolution_high 1.080 _reflns.number_obs 128901 _reflns.number_all ? _reflns.percent_possible_obs 99.700 _reflns.pdbx_Rmerge_I_obs 0.086 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 5.800 _reflns.B_iso_Wilson_estimate 12.410 _reflns.pdbx_redundancy 5.500 _reflns.pdbx_Rrim_I_all 0.095 _reflns.pdbx_Rpim_I_all 0.038 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_number_measured_all 710583 _reflns.pdbx_scaling_rejects 449 _reflns.pdbx_chi_squared ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.details ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_CC_half 1 1 1.080 1.100 ? 20607 ? ? 2.387 ? ? ? 3.300 ? 0.200 ? 6232 ? ? ? ? 97.700 2.834 1.494 0.392 1 2 5.910 62.390 ? 5919 ? ? 0.052 ? ? ? 6.900 ? 29.700 ? 857 ? ? ? ? 99.900 0.057 0.022 0.993 # _refine.entry_id 5S2A _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 1.0800 _refine.ls_d_res_low 62.3800 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 87.1000 _refine.ls_number_reflns_obs 112373 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1767 _refine.ls_R_factor_R_work 0.1749 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2106 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0400 _refine.ls_number_reflns_R_free 5663 _refine.ls_number_reflns_R_work ? _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 20.1000 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 3.2498 _refine.aniso_B[2][2] 3.2498 _refine.aniso_B[3][3] -6.4996 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9630 _refine.correlation_coeff_Fo_to_Fc_free 0.9480 _refine.overall_SU_R_Cruickshank_DPI 0.0340 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.0390 _refine.pdbx_overall_SU_R_Blow_DPI 0.0360 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.0410 _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model None _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 57.500 _refine.B_iso_min 11.420 _refine.pdbx_overall_phase_error ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_analyze.entry_id 5S2A _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_obs 0.280 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.0800 _refine_hist.d_res_low 62.3800 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 409 _refine_hist.number_atoms_total 2952 _refine_hist.pdbx_number_residues_total 334 _refine_hist.pdbx_B_iso_mean_ligand 23.90 _refine_hist.pdbx_B_iso_mean_solvent 30.03 _refine_hist.pdbx_number_atoms_protein 2527 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' t_dihedral_angle_d 916 ? ? 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' t_trig_c_planes ? ? ? ? ? 'X-RAY DIFFRACTION' t_gen_planes 483 ? ? 5.000 HARMONIC 'X-RAY DIFFRACTION' t_it 2662 ? ? 10.000 HARMONIC 'X-RAY DIFFRACTION' t_nbd ? ? ? ? ? 'X-RAY DIFFRACTION' t_improper_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_pseud_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_chiral_improper_torsion 344 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_sum_occupancies ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_distance ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_ideal_dist_contact 3025 ? ? 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_bond_d 2679 0.010 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_angle_deg 3659 1.090 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_omega_torsion ? 4.240 ? ? ? 'X-RAY DIFFRACTION' t_other_torsion ? 15.610 ? ? ? # _refine_ls_shell.d_res_high 1.0800 _refine_ls_shell.d_res_low 1.1200 _refine_ls_shell.pdbx_total_number_of_bins_used 51 _refine_ls_shell.percent_reflns_obs 15.0200 _refine_ls_shell.number_reflns_R_work 2128 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3115 _refine_ls_shell.R_factor_R_free 0.3004 _refine_ls_shell.percent_reflns_R_free 5.3400 _refine_ls_shell.number_reflns_R_free 120 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2248 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 5S2A _struct.title 'PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 Nsp3 macrodomain in complex with Z1263529624' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5S2A _struct_keywords.text 'SGC - Diamond I04-1 fragment screening, PanDDA, XChemExplorer, SARS-CoV-2 Nsp3 macrodomain, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 22 ? LYS A 31 ? ASP A 22 LYS A 31 1 ? 10 HELX_P HELX_P2 AA2 GLY A 47 ? THR A 57 ? GLY A 47 THR A 57 1 ? 11 HELX_P HELX_P3 AA3 ASN A 59 ? GLY A 73 ? ASN A 59 GLY A 73 1 ? 15 HELX_P HELX_P4 AA4 ASN A 99 ? GLY A 103 ? ASN A 99 GLY A 103 5 ? 5 HELX_P HELX_P5 AA5 GLN A 107 ? ASN A 115 ? GLN A 107 ASN A 115 1 ? 9 HELX_P HELX_P6 AA6 PHE A 116 ? HIS A 119 ? PHE A 116 HIS A 119 5 ? 4 HELX_P HELX_P7 AA7 ALA A 129 ? GLY A 133 ? ALA A 129 GLY A 133 5 ? 5 HELX_P HELX_P8 AA8 ASP A 135 ? VAL A 147 ? ASP A 135 VAL A 147 1 ? 13 HELX_P HELX_P9 AA9 ASP A 157 ? PHE A 168 ? ASP A 157 PHE A 168 1 ? 12 HELX_P HELX_P10 AB1 ASP B 22 ? LYS B 31 ? ASP B 22 LYS B 31 1 ? 10 HELX_P HELX_P11 AB2 GLY B 47 ? THR B 57 ? GLY B 47 THR B 57 1 ? 11 HELX_P HELX_P12 AB3 ASN B 59 ? GLY B 73 ? ASN B 59 GLY B 73 1 ? 15 HELX_P HELX_P13 AB4 ASN B 99 ? GLY B 103 ? ASN B 99 GLY B 103 5 ? 5 HELX_P HELX_P14 AB5 GLN B 107 ? ASN B 115 ? GLN B 107 ASN B 115 1 ? 9 HELX_P HELX_P15 AB6 PHE B 116 ? HIS B 119 ? PHE B 116 HIS B 119 5 ? 4 HELX_P HELX_P16 AB7 ALA B 129 ? GLY B 133 ? ALA B 129 GLY B 133 5 ? 5 HELX_P HELX_P17 AB8 ASP B 135 ? VAL B 147 ? ASP B 135 VAL B 147 1 ? 13 HELX_P HELX_P18 AB9 ASP B 157 ? LEU B 169 ? ASP B 157 LEU B 169 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 3 ? AA3 ? 4 ? AA4 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? parallel AA3 3 4 ? parallel AA4 1 2 ? parallel AA4 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 10 ? LYS A 11 ? LEU A 10 LYS A 11 AA1 2 VAL A 16 ? ASN A 20 ? VAL A 16 ASN A 20 AA1 3 ASN A 150 ? VAL A 155 ? ASN A 150 VAL A 155 AA1 4 VAL A 121 ? ALA A 124 ? VAL A 121 ALA A 124 AA2 1 VAL A 34 ? ALA A 38 ? VAL A 34 ALA A 38 AA2 2 HIS A 91 ? VAL A 95 ? HIS A 91 VAL A 95 AA2 3 SER A 80 ? SER A 84 ? SER A 80 SER A 84 AA3 1 LEU B 10 ? LYS B 11 ? LEU B 10 LYS B 11 AA3 2 VAL B 16 ? ASN B 20 ? VAL B 16 ASN B 20 AA3 3 ASN B 150 ? VAL B 155 ? ASN B 150 VAL B 155 AA3 4 VAL B 121 ? ALA B 124 ? VAL B 121 ALA B 124 AA4 1 VAL B 34 ? ALA B 39 ? VAL B 34 ALA B 39 AA4 2 HIS B 91 ? VAL B 96 ? HIS B 91 VAL B 96 AA4 3 SER B 80 ? SER B 84 ? SER B 80 SER B 84 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 10 ? N LEU A 10 O ILE A 18 ? O ILE A 18 AA1 2 3 N TYR A 17 ? N TYR A 17 O LEU A 153 ? O LEU A 153 AA1 3 4 O TYR A 152 ? O TYR A 152 N LEU A 122 ? N LEU A 122 AA2 1 2 N ASN A 37 ? N ASN A 37 O VAL A 95 ? O VAL A 95 AA2 2 3 O CYS A 92 ? O CYS A 92 N LEU A 83 ? N LEU A 83 AA3 1 2 N LEU B 10 ? N LEU B 10 O ILE B 18 ? O ILE B 18 AA3 2 3 N TYR B 17 ? N TYR B 17 O LEU B 153 ? O LEU B 153 AA3 3 4 O TYR B 152 ? O TYR B 152 N ALA B 124 ? N ALA B 124 AA4 1 2 N ASN B 37 ? N ASN B 37 O VAL B 95 ? O VAL B 95 AA4 2 3 O CYS B 92 ? O CYS B 92 N LEU B 83 ? N LEU B 83 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id WS4 _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 8 _struct_site.details 'binding site for residue WS4 A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 GLY A 130 ? GLY A 130 . ? 1_555 ? 2 AC1 8 ALA A 134 ? ALA A 134 . ? 1_555 ? 3 AC1 8 PRO A 136 ? PRO A 136 . ? 1_555 ? 4 AC1 8 ASP A 157 ? ASP A 157 . ? 1_555 ? 5 AC1 8 ASP A 162 ? ASP A 162 . ? 3_554 ? 6 AC1 8 SER A 166 ? SER A 166 . ? 3_554 ? 7 AC1 8 HOH D . ? HOH A 323 . ? 1_555 ? 8 AC1 8 HOH D . ? HOH A 353 . ? 1_555 ? # _atom_sites.entry_id 5S2A _atom_sites.fract_transf_matrix[1][1] 0.011336 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011336 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025589 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 ? ? ? A . n A 1 2 MET 2 2 ? ? ? A . n A 1 3 VAL 3 3 ? ? ? A . n A 1 4 ASN 4 4 ? ? ? A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 PHE 6 6 6 PHE PHE A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 TYR 9 9 9 TYR TYR A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 ASN 15 15 15 ASN ASN A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 TYR 17 17 17 TYR TYR A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ASN 20 20 20 ASN ASN A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 PRO 32 32 32 PRO PRO A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 TYR 42 42 42 TYR TYR A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 HIS 45 45 45 HIS HIS A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 MET 61 61 61 MET MET A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 TYR 68 68 68 TYR TYR A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 ASN 72 72 72 ASN ASN A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 CYS 81 81 81 CYS CYS A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 HIS 86 86 86 HIS HIS A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 HIS 91 91 91 HIS HIS A . n A 1 92 CYS 92 92 92 CYS CYS A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 HIS 94 94 94 HIS HIS A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 PRO 98 98 98 PRO PRO A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 ASN 101 101 101 ASN ASN A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 GLN 107 107 107 GLN GLN A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 SER 111 111 111 SER SER A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 TYR 113 113 113 TYR TYR A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 ASN 115 115 115 ASN ASN A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 ASN 117 117 117 ASN ASN A . n A 1 118 GLN 118 118 118 GLN GLN A . n A 1 119 HIS 119 119 119 HIS HIS A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 PRO 125 125 125 PRO PRO A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 SER 128 128 128 SER SER A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 GLY 130 130 130 GLY GLY A . n A 1 131 ILE 131 131 131 ILE ILE A . n A 1 132 PHE 132 132 132 PHE PHE A . n A 1 133 GLY 133 133 133 GLY GLY A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 PRO 136 136 136 PRO PRO A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 HIS 138 138 138 HIS HIS A . n A 1 139 SER 139 139 139 SER SER A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 ARG 141 141 141 ARG ARG A . n A 1 142 VAL 142 142 142 VAL VAL A . n A 1 143 CYS 143 143 143 CYS CYS A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 THR 146 146 146 THR THR A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 ARG 148 148 148 ARG ARG A . n A 1 149 THR 149 149 149 THR THR A . n A 1 150 ASN 150 150 150 ASN ASN A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 TYR 152 152 152 TYR TYR A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 VAL 155 155 155 VAL VAL A . n A 1 156 PHE 156 156 156 PHE PHE A . n A 1 157 ASP 157 157 157 ASP ASP A . n A 1 158 LYS 158 158 158 LYS LYS A . n A 1 159 ASN 159 159 159 ASN ASN A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 TYR 161 161 161 TYR TYR A . n A 1 162 ASP 162 162 162 ASP ASP A . n A 1 163 LYS 163 163 163 LYS LYS A . n A 1 164 LEU 164 164 164 LEU LEU A . n A 1 165 VAL 165 165 165 VAL VAL A . n A 1 166 SER 166 166 166 SER SER A . n A 1 167 SER 167 167 167 SER SER A . n A 1 168 PHE 168 168 168 PHE PHE A . n A 1 169 LEU 169 169 169 LEU LEU A . n B 1 1 SER 1 1 1 SER SER B . n B 1 2 MET 2 2 2 MET MET B . n B 1 3 VAL 3 3 3 VAL VAL B . n B 1 4 ASN 4 4 4 ASN ASN B . n B 1 5 SER 5 5 5 SER SER B . n B 1 6 PHE 6 6 6 PHE PHE B . n B 1 7 SER 7 7 7 SER SER B . n B 1 8 GLY 8 8 8 GLY GLY B . n B 1 9 TYR 9 9 9 TYR TYR B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 LYS 11 11 11 LYS LYS B . n B 1 12 LEU 12 12 12 LEU LEU B . n B 1 13 THR 13 13 13 THR THR B . n B 1 14 ASP 14 14 14 ASP ASP B . n B 1 15 ASN 15 15 15 ASN ASN B . n B 1 16 VAL 16 16 16 VAL VAL B . n B 1 17 TYR 17 17 17 TYR TYR B . n B 1 18 ILE 18 18 18 ILE ILE B . n B 1 19 LYS 19 19 19 LYS LYS B . n B 1 20 ASN 20 20 20 ASN ASN B . n B 1 21 ALA 21 21 21 ALA ALA B . n B 1 22 ASP 22 22 22 ASP ASP B . n B 1 23 ILE 23 23 23 ILE ILE B . n B 1 24 VAL 24 24 24 VAL VAL B . n B 1 25 GLU 25 25 25 GLU GLU B . n B 1 26 GLU 26 26 26 GLU GLU B . n B 1 27 ALA 27 27 27 ALA ALA B . n B 1 28 LYS 28 28 28 LYS LYS B . n B 1 29 LYS 29 29 29 LYS LYS B . n B 1 30 VAL 30 30 30 VAL VAL B . n B 1 31 LYS 31 31 31 LYS LYS B . n B 1 32 PRO 32 32 32 PRO PRO B . n B 1 33 THR 33 33 33 THR THR B . n B 1 34 VAL 34 34 34 VAL VAL B . n B 1 35 VAL 35 35 35 VAL VAL B . n B 1 36 VAL 36 36 36 VAL VAL B . n B 1 37 ASN 37 37 37 ASN ASN B . n B 1 38 ALA 38 38 38 ALA ALA B . n B 1 39 ALA 39 39 39 ALA ALA B . n B 1 40 ASN 40 40 40 ASN ASN B . n B 1 41 VAL 41 41 41 VAL VAL B . n B 1 42 TYR 42 42 42 TYR TYR B . n B 1 43 LEU 43 43 43 LEU LEU B . n B 1 44 LYS 44 44 44 LYS LYS B . n B 1 45 HIS 45 45 45 HIS HIS B . n B 1 46 GLY 46 46 46 GLY GLY B . n B 1 47 GLY 47 47 47 GLY GLY B . n B 1 48 GLY 48 48 48 GLY GLY B . n B 1 49 VAL 49 49 49 VAL VAL B . n B 1 50 ALA 50 50 50 ALA ALA B . n B 1 51 GLY 51 51 51 GLY GLY B . n B 1 52 ALA 52 52 52 ALA ALA B . n B 1 53 LEU 53 53 53 LEU LEU B . n B 1 54 ASN 54 54 54 ASN ASN B . n B 1 55 LYS 55 55 55 LYS LYS B . n B 1 56 ALA 56 56 56 ALA ALA B . n B 1 57 THR 57 57 57 THR THR B . n B 1 58 ASN 58 58 58 ASN ASN B . n B 1 59 ASN 59 59 59 ASN ASN B . n B 1 60 ALA 60 60 60 ALA ALA B . n B 1 61 MET 61 61 61 MET MET B . n B 1 62 GLN 62 62 62 GLN GLN B . n B 1 63 VAL 63 63 63 VAL VAL B . n B 1 64 GLU 64 64 64 GLU GLU B . n B 1 65 SER 65 65 65 SER SER B . n B 1 66 ASP 66 66 66 ASP ASP B . n B 1 67 ASP 67 67 67 ASP ASP B . n B 1 68 TYR 68 68 68 TYR TYR B . n B 1 69 ILE 69 69 69 ILE ILE B . n B 1 70 ALA 70 70 70 ALA ALA B . n B 1 71 THR 71 71 71 THR THR B . n B 1 72 ASN 72 72 72 ASN ASN B . n B 1 73 GLY 73 73 73 GLY GLY B . n B 1 74 PRO 74 74 74 PRO PRO B . n B 1 75 LEU 75 75 75 LEU LEU B . n B 1 76 LYS 76 76 76 LYS LYS B . n B 1 77 VAL 77 77 77 VAL VAL B . n B 1 78 GLY 78 78 78 GLY GLY B . n B 1 79 GLY 79 79 79 GLY GLY B . n B 1 80 SER 80 80 80 SER SER B . n B 1 81 CYS 81 81 81 CYS CYS B . n B 1 82 VAL 82 82 82 VAL VAL B . n B 1 83 LEU 83 83 83 LEU LEU B . n B 1 84 SER 84 84 84 SER SER B . n B 1 85 GLY 85 85 85 GLY GLY B . n B 1 86 HIS 86 86 86 HIS HIS B . n B 1 87 ASN 87 87 87 ASN ASN B . n B 1 88 LEU 88 88 88 LEU LEU B . n B 1 89 ALA 89 89 89 ALA ALA B . n B 1 90 LYS 90 90 90 LYS LYS B . n B 1 91 HIS 91 91 91 HIS HIS B . n B 1 92 CYS 92 92 92 CYS CYS B . n B 1 93 LEU 93 93 93 LEU LEU B . n B 1 94 HIS 94 94 94 HIS HIS B . n B 1 95 VAL 95 95 95 VAL VAL B . n B 1 96 VAL 96 96 96 VAL VAL B . n B 1 97 GLY 97 97 97 GLY GLY B . n B 1 98 PRO 98 98 98 PRO PRO B . n B 1 99 ASN 99 99 99 ASN ASN B . n B 1 100 VAL 100 100 100 VAL VAL B . n B 1 101 ASN 101 101 101 ASN ASN B . n B 1 102 LYS 102 102 102 LYS LYS B . n B 1 103 GLY 103 103 103 GLY GLY B . n B 1 104 GLU 104 104 104 GLU GLU B . n B 1 105 ASP 105 105 105 ASP ASP B . n B 1 106 ILE 106 106 106 ILE ILE B . n B 1 107 GLN 107 107 107 GLN GLN B . n B 1 108 LEU 108 108 108 LEU LEU B . n B 1 109 LEU 109 109 109 LEU LEU B . n B 1 110 LYS 110 110 110 LYS LYS B . n B 1 111 SER 111 111 111 SER SER B . n B 1 112 ALA 112 112 112 ALA ALA B . n B 1 113 TYR 113 113 113 TYR TYR B . n B 1 114 GLU 114 114 114 GLU GLU B . n B 1 115 ASN 115 115 115 ASN ASN B . n B 1 116 PHE 116 116 116 PHE PHE B . n B 1 117 ASN 117 117 117 ASN ASN B . n B 1 118 GLN 118 118 118 GLN GLN B . n B 1 119 HIS 119 119 119 HIS HIS B . n B 1 120 GLU 120 120 120 GLU GLU B . n B 1 121 VAL 121 121 121 VAL VAL B . n B 1 122 LEU 122 122 122 LEU LEU B . n B 1 123 LEU 123 123 123 LEU LEU B . n B 1 124 ALA 124 124 124 ALA ALA B . n B 1 125 PRO 125 125 125 PRO PRO B . n B 1 126 LEU 126 126 126 LEU LEU B . n B 1 127 LEU 127 127 127 LEU LEU B . n B 1 128 SER 128 128 128 SER SER B . n B 1 129 ALA 129 129 129 ALA ALA B . n B 1 130 GLY 130 130 130 GLY GLY B . n B 1 131 ILE 131 131 131 ILE ILE B . n B 1 132 PHE 132 132 132 PHE PHE B . n B 1 133 GLY 133 133 133 GLY GLY B . n B 1 134 ALA 134 134 134 ALA ALA B . n B 1 135 ASP 135 135 135 ASP ASP B . n B 1 136 PRO 136 136 136 PRO PRO B . n B 1 137 ILE 137 137 137 ILE ILE B . n B 1 138 HIS 138 138 138 HIS HIS B . n B 1 139 SER 139 139 139 SER SER B . n B 1 140 LEU 140 140 140 LEU LEU B . n B 1 141 ARG 141 141 141 ARG ARG B . n B 1 142 VAL 142 142 142 VAL VAL B . n B 1 143 CYS 143 143 143 CYS CYS B . n B 1 144 VAL 144 144 144 VAL VAL B . n B 1 145 ASP 145 145 145 ASP ASP B . n B 1 146 THR 146 146 146 THR THR B . n B 1 147 VAL 147 147 147 VAL VAL B . n B 1 148 ARG 148 148 148 ARG ARG B . n B 1 149 THR 149 149 149 THR THR B . n B 1 150 ASN 150 150 150 ASN ASN B . n B 1 151 VAL 151 151 151 VAL VAL B . n B 1 152 TYR 152 152 152 TYR TYR B . n B 1 153 LEU 153 153 153 LEU LEU B . n B 1 154 ALA 154 154 154 ALA ALA B . n B 1 155 VAL 155 155 155 VAL VAL B . n B 1 156 PHE 156 156 156 PHE PHE B . n B 1 157 ASP 157 157 157 ASP ASP B . n B 1 158 LYS 158 158 158 LYS LYS B . n B 1 159 ASN 159 159 159 ASN ASN B . n B 1 160 LEU 160 160 160 LEU LEU B . n B 1 161 TYR 161 161 161 TYR TYR B . n B 1 162 ASP 162 162 162 ASP ASP B . n B 1 163 LYS 163 163 163 LYS LYS B . n B 1 164 LEU 164 164 164 LEU LEU B . n B 1 165 VAL 165 165 165 VAL VAL B . n B 1 166 SER 166 166 166 SER SER B . n B 1 167 SER 167 167 167 SER SER B . n B 1 168 PHE 168 168 168 PHE PHE B . n B 1 169 LEU 169 169 169 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 WS4 1 201 201 WS4 LIG A . D 3 HOH 1 301 206 HOH HOH A . D 3 HOH 2 302 298 HOH HOH A . D 3 HOH 3 303 352 HOH HOH A . D 3 HOH 4 304 286 HOH HOH A . D 3 HOH 5 305 320 HOH HOH A . D 3 HOH 6 306 91 HOH HOH A . D 3 HOH 7 307 93 HOH HOH A . D 3 HOH 8 308 370 HOH HOH A . D 3 HOH 9 309 333 HOH HOH A . D 3 HOH 10 310 152 HOH HOH A . D 3 HOH 11 311 388 HOH HOH A . D 3 HOH 12 312 55 HOH HOH A . D 3 HOH 13 313 397 HOH HOH A . D 3 HOH 14 314 197 HOH HOH A . D 3 HOH 15 315 15 HOH HOH A . D 3 HOH 16 316 326 HOH HOH A . D 3 HOH 17 317 138 HOH HOH A . D 3 HOH 18 318 188 HOH HOH A . D 3 HOH 19 319 85 HOH HOH A . D 3 HOH 20 320 150 HOH HOH A . D 3 HOH 21 321 58 HOH HOH A . D 3 HOH 22 322 310 HOH HOH A . D 3 HOH 23 323 402 HOH HOH A . D 3 HOH 24 324 36 HOH HOH A . D 3 HOH 25 325 124 HOH HOH A . D 3 HOH 26 326 266 HOH HOH A . D 3 HOH 27 327 75 HOH HOH A . D 3 HOH 28 328 293 HOH HOH A . D 3 HOH 29 329 148 HOH HOH A . D 3 HOH 30 330 340 HOH HOH A . D 3 HOH 31 331 273 HOH HOH A . D 3 HOH 32 332 361 HOH HOH A . D 3 HOH 33 333 147 HOH HOH A . D 3 HOH 34 334 383 HOH HOH A . D 3 HOH 35 335 358 HOH HOH A . D 3 HOH 36 336 120 HOH HOH A . D 3 HOH 37 337 43 HOH HOH A . D 3 HOH 38 338 6 HOH HOH A . D 3 HOH 39 339 159 HOH HOH A . D 3 HOH 40 340 132 HOH HOH A . D 3 HOH 41 341 210 HOH HOH A . D 3 HOH 42 342 165 HOH HOH A . D 3 HOH 43 343 337 HOH HOH A . D 3 HOH 44 344 46 HOH HOH A . D 3 HOH 45 345 35 HOH HOH A . D 3 HOH 46 346 146 HOH HOH A . D 3 HOH 47 347 249 HOH HOH A . D 3 HOH 48 348 260 HOH HOH A . D 3 HOH 49 349 47 HOH HOH A . D 3 HOH 50 350 114 HOH HOH A . D 3 HOH 51 351 3 HOH HOH A . D 3 HOH 52 352 180 HOH HOH A . D 3 HOH 53 353 11 HOH HOH A . D 3 HOH 54 354 136 HOH HOH A . D 3 HOH 55 355 170 HOH HOH A . D 3 HOH 56 356 265 HOH HOH A . D 3 HOH 57 357 218 HOH HOH A . D 3 HOH 58 358 48 HOH HOH A . D 3 HOH 59 359 26 HOH HOH A . D 3 HOH 60 360 254 HOH HOH A . D 3 HOH 61 361 126 HOH HOH A . D 3 HOH 62 362 53 HOH HOH A . D 3 HOH 63 363 274 HOH HOH A . D 3 HOH 64 364 40 HOH HOH A . D 3 HOH 65 365 189 HOH HOH A . D 3 HOH 66 366 95 HOH HOH A . D 3 HOH 67 367 73 HOH HOH A . D 3 HOH 68 368 130 HOH HOH A . D 3 HOH 69 369 330 HOH HOH A . D 3 HOH 70 370 13 HOH HOH A . D 3 HOH 71 371 39 HOH HOH A . D 3 HOH 72 372 137 HOH HOH A . D 3 HOH 73 373 10 HOH HOH A . D 3 HOH 74 374 202 HOH HOH A . D 3 HOH 75 375 127 HOH HOH A . D 3 HOH 76 376 226 HOH HOH A . D 3 HOH 77 377 181 HOH HOH A . D 3 HOH 78 378 331 HOH HOH A . D 3 HOH 79 379 79 HOH HOH A . D 3 HOH 80 380 287 HOH HOH A . D 3 HOH 81 381 289 HOH HOH A . D 3 HOH 82 382 104 HOH HOH A . D 3 HOH 83 383 68 HOH HOH A . D 3 HOH 84 384 262 HOH HOH A . D 3 HOH 85 385 296 HOH HOH A . D 3 HOH 86 386 59 HOH HOH A . D 3 HOH 87 387 191 HOH HOH A . D 3 HOH 88 388 66 HOH HOH A . D 3 HOH 89 389 92 HOH HOH A . D 3 HOH 90 390 83 HOH HOH A . D 3 HOH 91 391 251 HOH HOH A . D 3 HOH 92 392 1 HOH HOH A . D 3 HOH 93 393 38 HOH HOH A . D 3 HOH 94 394 50 HOH HOH A . D 3 HOH 95 395 214 HOH HOH A . D 3 HOH 96 396 86 HOH HOH A . D 3 HOH 97 397 76 HOH HOH A . D 3 HOH 98 398 122 HOH HOH A . D 3 HOH 99 399 80 HOH HOH A . D 3 HOH 100 400 107 HOH HOH A . D 3 HOH 101 401 61 HOH HOH A . D 3 HOH 102 402 201 HOH HOH A . D 3 HOH 103 403 105 HOH HOH A . D 3 HOH 104 404 2 HOH HOH A . D 3 HOH 105 405 221 HOH HOH A . D 3 HOH 106 406 357 HOH HOH A . D 3 HOH 107 407 128 HOH HOH A . D 3 HOH 108 408 149 HOH HOH A . D 3 HOH 109 409 229 HOH HOH A . D 3 HOH 110 410 338 HOH HOH A . D 3 HOH 111 411 161 HOH HOH A . D 3 HOH 112 412 34 HOH HOH A . D 3 HOH 113 413 123 HOH HOH A . D 3 HOH 114 414 98 HOH HOH A . D 3 HOH 115 415 334 HOH HOH A . D 3 HOH 116 416 354 HOH HOH A . D 3 HOH 117 417 184 HOH HOH A . D 3 HOH 118 418 101 HOH HOH A . D 3 HOH 119 419 81 HOH HOH A . D 3 HOH 120 420 30 HOH HOH A . D 3 HOH 121 421 177 HOH HOH A . D 3 HOH 122 422 350 HOH HOH A . D 3 HOH 123 423 110 HOH HOH A . D 3 HOH 124 424 171 HOH HOH A . D 3 HOH 125 425 207 HOH HOH A . D 3 HOH 126 426 288 HOH HOH A . D 3 HOH 127 427 295 HOH HOH A . D 3 HOH 128 428 64 HOH HOH A . D 3 HOH 129 429 282 HOH HOH A . D 3 HOH 130 430 151 HOH HOH A . D 3 HOH 131 431 198 HOH HOH A . D 3 HOH 132 432 49 HOH HOH A . D 3 HOH 133 433 242 HOH HOH A . D 3 HOH 134 434 63 HOH HOH A . D 3 HOH 135 435 231 HOH HOH A . D 3 HOH 136 436 8 HOH HOH A . D 3 HOH 137 437 173 HOH HOH A . D 3 HOH 138 438 347 HOH HOH A . D 3 HOH 139 439 116 HOH HOH A . D 3 HOH 140 440 317 HOH HOH A . D 3 HOH 141 441 309 HOH HOH A . D 3 HOH 142 442 97 HOH HOH A . D 3 HOH 143 443 351 HOH HOH A . D 3 HOH 144 444 31 HOH HOH A . D 3 HOH 145 445 292 HOH HOH A . D 3 HOH 146 446 27 HOH HOH A . D 3 HOH 147 447 67 HOH HOH A . D 3 HOH 148 448 157 HOH HOH A . D 3 HOH 149 449 283 HOH HOH A . D 3 HOH 150 450 318 HOH HOH A . D 3 HOH 151 451 376 HOH HOH A . D 3 HOH 152 452 308 HOH HOH A . D 3 HOH 153 453 356 HOH HOH A . D 3 HOH 154 454 195 HOH HOH A . D 3 HOH 155 455 366 HOH HOH A . D 3 HOH 156 456 237 HOH HOH A . D 3 HOH 157 457 301 HOH HOH A . D 3 HOH 158 458 325 HOH HOH A . D 3 HOH 159 459 190 HOH HOH A . D 3 HOH 160 460 238 HOH HOH A . D 3 HOH 161 461 306 HOH HOH A . D 3 HOH 162 462 259 HOH HOH A . D 3 HOH 163 463 378 HOH HOH A . D 3 HOH 164 464 244 HOH HOH A . D 3 HOH 165 465 279 HOH HOH A . D 3 HOH 166 466 222 HOH HOH A . D 3 HOH 167 467 208 HOH HOH A . D 3 HOH 168 468 324 HOH HOH A . D 3 HOH 169 469 230 HOH HOH A . D 3 HOH 170 470 400 HOH HOH A . D 3 HOH 171 471 339 HOH HOH A . D 3 HOH 172 472 374 HOH HOH A . D 3 HOH 173 473 88 HOH HOH A . D 3 HOH 174 474 205 HOH HOH A . D 3 HOH 175 475 196 HOH HOH A . D 3 HOH 176 476 405 HOH HOH A . D 3 HOH 177 477 239 HOH HOH A . D 3 HOH 178 478 392 HOH HOH A . D 3 HOH 179 479 291 HOH HOH A . D 3 HOH 180 480 285 HOH HOH A . D 3 HOH 181 481 232 HOH HOH A . D 3 HOH 182 482 280 HOH HOH A . D 3 HOH 183 483 379 HOH HOH A . D 3 HOH 184 484 141 HOH HOH A . D 3 HOH 185 485 145 HOH HOH A . D 3 HOH 186 486 272 HOH HOH A . D 3 HOH 187 487 183 HOH HOH A . D 3 HOH 188 488 368 HOH HOH A . D 3 HOH 189 489 385 HOH HOH A . D 3 HOH 190 490 377 HOH HOH A . D 3 HOH 191 491 108 HOH HOH A . D 3 HOH 192 492 155 HOH HOH A . D 3 HOH 193 493 395 HOH HOH A . D 3 HOH 194 494 305 HOH HOH A . D 3 HOH 195 495 267 HOH HOH A . D 3 HOH 196 496 403 HOH HOH A . D 3 HOH 197 497 253 HOH HOH A . D 3 HOH 198 498 407 HOH HOH A . D 3 HOH 199 499 175 HOH HOH A . D 3 HOH 200 500 394 HOH HOH A . D 3 HOH 201 501 367 HOH HOH A . D 3 HOH 202 502 321 HOH HOH A . D 3 HOH 203 503 387 HOH HOH A . D 3 HOH 204 504 389 HOH HOH A . D 3 HOH 205 505 158 HOH HOH A . D 3 HOH 206 506 391 HOH HOH A . D 3 HOH 207 507 236 HOH HOH A . D 3 HOH 208 508 384 HOH HOH A . D 3 HOH 209 509 302 HOH HOH A . D 3 HOH 210 510 248 HOH HOH A . E 3 HOH 1 201 154 HOH HOH B . E 3 HOH 2 202 386 HOH HOH B . E 3 HOH 3 203 164 HOH HOH B . E 3 HOH 4 204 284 HOH HOH B . E 3 HOH 5 205 82 HOH HOH B . E 3 HOH 6 206 153 HOH HOH B . E 3 HOH 7 207 119 HOH HOH B . E 3 HOH 8 208 9 HOH HOH B . E 3 HOH 9 209 408 HOH HOH B . E 3 HOH 10 210 257 HOH HOH B . E 3 HOH 11 211 323 HOH HOH B . E 3 HOH 12 212 60 HOH HOH B . E 3 HOH 13 213 220 HOH HOH B . E 3 HOH 14 214 399 HOH HOH B . E 3 HOH 15 215 54 HOH HOH B . E 3 HOH 16 216 247 HOH HOH B . E 3 HOH 17 217 192 HOH HOH B . E 3 HOH 18 218 70 HOH HOH B . E 3 HOH 19 219 363 HOH HOH B . E 3 HOH 20 220 211 HOH HOH B . E 3 HOH 21 221 252 HOH HOH B . E 3 HOH 22 222 178 HOH HOH B . E 3 HOH 23 223 344 HOH HOH B . E 3 HOH 24 224 319 HOH HOH B . E 3 HOH 25 225 228 HOH HOH B . E 3 HOH 26 226 160 HOH HOH B . E 3 HOH 27 227 243 HOH HOH B . E 3 HOH 28 228 299 HOH HOH B . E 3 HOH 29 229 140 HOH HOH B . E 3 HOH 30 230 186 HOH HOH B . E 3 HOH 31 231 169 HOH HOH B . E 3 HOH 32 232 304 HOH HOH B . E 3 HOH 33 233 12 HOH HOH B . E 3 HOH 34 234 139 HOH HOH B . E 3 HOH 35 235 199 HOH HOH B . E 3 HOH 36 236 45 HOH HOH B . E 3 HOH 37 237 42 HOH HOH B . E 3 HOH 38 238 7 HOH HOH B . E 3 HOH 39 239 270 HOH HOH B . E 3 HOH 40 240 33 HOH HOH B . E 3 HOH 41 241 25 HOH HOH B . E 3 HOH 42 242 41 HOH HOH B . E 3 HOH 43 243 18 HOH HOH B . E 3 HOH 44 244 258 HOH HOH B . E 3 HOH 45 245 102 HOH HOH B . E 3 HOH 46 246 144 HOH HOH B . E 3 HOH 47 247 52 HOH HOH B . E 3 HOH 48 248 200 HOH HOH B . E 3 HOH 49 249 241 HOH HOH B . E 3 HOH 50 250 162 HOH HOH B . E 3 HOH 51 251 96 HOH HOH B . E 3 HOH 52 252 167 HOH HOH B . E 3 HOH 53 253 185 HOH HOH B . E 3 HOH 54 254 204 HOH HOH B . E 3 HOH 55 255 20 HOH HOH B . E 3 HOH 56 256 121 HOH HOH B . E 3 HOH 57 257 156 HOH HOH B . E 3 HOH 58 258 255 HOH HOH B . E 3 HOH 59 259 355 HOH HOH B . E 3 HOH 60 260 37 HOH HOH B . E 3 HOH 61 261 349 HOH HOH B . E 3 HOH 62 262 32 HOH HOH B . E 3 HOH 63 263 166 HOH HOH B . E 3 HOH 64 264 176 HOH HOH B . E 3 HOH 65 265 56 HOH HOH B . E 3 HOH 66 266 94 HOH HOH B . E 3 HOH 67 267 16 HOH HOH B . E 3 HOH 68 268 14 HOH HOH B . E 3 HOH 69 269 235 HOH HOH B . E 3 HOH 70 270 142 HOH HOH B . E 3 HOH 71 271 125 HOH HOH B . E 3 HOH 72 272 360 HOH HOH B . E 3 HOH 73 273 4 HOH HOH B . E 3 HOH 74 274 90 HOH HOH B . E 3 HOH 75 275 359 HOH HOH B . E 3 HOH 76 276 346 HOH HOH B . E 3 HOH 77 277 134 HOH HOH B . E 3 HOH 78 278 216 HOH HOH B . E 3 HOH 79 279 99 HOH HOH B . E 3 HOH 80 280 131 HOH HOH B . E 3 HOH 81 281 72 HOH HOH B . E 3 HOH 82 282 212 HOH HOH B . E 3 HOH 83 283 29 HOH HOH B . E 3 HOH 84 284 118 HOH HOH B . E 3 HOH 85 285 179 HOH HOH B . E 3 HOH 86 286 187 HOH HOH B . E 3 HOH 87 287 65 HOH HOH B . E 3 HOH 88 288 348 HOH HOH B . E 3 HOH 89 289 78 HOH HOH B . E 3 HOH 90 290 264 HOH HOH B . E 3 HOH 91 291 297 HOH HOH B . E 3 HOH 92 292 28 HOH HOH B . E 3 HOH 93 293 246 HOH HOH B . E 3 HOH 94 294 117 HOH HOH B . E 3 HOH 95 295 19 HOH HOH B . E 3 HOH 96 296 74 HOH HOH B . E 3 HOH 97 297 62 HOH HOH B . E 3 HOH 98 298 77 HOH HOH B . E 3 HOH 99 299 23 HOH HOH B . E 3 HOH 100 300 217 HOH HOH B . E 3 HOH 101 301 353 HOH HOH B . E 3 HOH 102 302 17 HOH HOH B . E 3 HOH 103 303 341 HOH HOH B . E 3 HOH 104 304 51 HOH HOH B . E 3 HOH 105 305 135 HOH HOH B . E 3 HOH 106 306 21 HOH HOH B . E 3 HOH 107 307 311 HOH HOH B . E 3 HOH 108 308 224 HOH HOH B . E 3 HOH 109 309 233 HOH HOH B . E 3 HOH 110 310 193 HOH HOH B . E 3 HOH 111 311 84 HOH HOH B . E 3 HOH 112 312 5 HOH HOH B . E 3 HOH 113 313 44 HOH HOH B . E 3 HOH 114 314 100 HOH HOH B . E 3 HOH 115 315 369 HOH HOH B . E 3 HOH 116 316 213 HOH HOH B . E 3 HOH 117 317 89 HOH HOH B . E 3 HOH 118 318 307 HOH HOH B . E 3 HOH 119 319 294 HOH HOH B . E 3 HOH 120 320 390 HOH HOH B . E 3 HOH 121 321 332 HOH HOH B . E 3 HOH 122 322 182 HOH HOH B . E 3 HOH 123 323 24 HOH HOH B . E 3 HOH 124 324 163 HOH HOH B . E 3 HOH 125 325 382 HOH HOH B . E 3 HOH 126 326 168 HOH HOH B . E 3 HOH 127 327 329 HOH HOH B . E 3 HOH 128 328 203 HOH HOH B . E 3 HOH 129 329 133 HOH HOH B . E 3 HOH 130 330 393 HOH HOH B . E 3 HOH 131 331 87 HOH HOH B . E 3 HOH 132 332 109 HOH HOH B . E 3 HOH 133 333 336 HOH HOH B . E 3 HOH 134 334 143 HOH HOH B . E 3 HOH 135 335 113 HOH HOH B . E 3 HOH 136 336 271 HOH HOH B . E 3 HOH 137 337 256 HOH HOH B . E 3 HOH 138 338 22 HOH HOH B . E 3 HOH 139 339 69 HOH HOH B . E 3 HOH 140 340 335 HOH HOH B . E 3 HOH 141 341 375 HOH HOH B . E 3 HOH 142 342 313 HOH HOH B . E 3 HOH 143 343 362 HOH HOH B . E 3 HOH 144 344 314 HOH HOH B . E 3 HOH 145 345 234 HOH HOH B . E 3 HOH 146 346 115 HOH HOH B . E 3 HOH 147 347 345 HOH HOH B . E 3 HOH 148 348 371 HOH HOH B . E 3 HOH 149 349 281 HOH HOH B . E 3 HOH 150 350 276 HOH HOH B . E 3 HOH 151 351 300 HOH HOH B . E 3 HOH 152 352 398 HOH HOH B . E 3 HOH 153 353 372 HOH HOH B . E 3 HOH 154 354 380 HOH HOH B . E 3 HOH 155 355 327 HOH HOH B . E 3 HOH 156 356 342 HOH HOH B . E 3 HOH 157 357 381 HOH HOH B . E 3 HOH 158 358 106 HOH HOH B . E 3 HOH 159 359 268 HOH HOH B . E 3 HOH 160 360 316 HOH HOH B . E 3 HOH 161 361 277 HOH HOH B . E 3 HOH 162 362 223 HOH HOH B . E 3 HOH 163 363 278 HOH HOH B . E 3 HOH 164 364 103 HOH HOH B . E 3 HOH 165 365 129 HOH HOH B . E 3 HOH 166 366 290 HOH HOH B . E 3 HOH 167 367 328 HOH HOH B . E 3 HOH 168 368 269 HOH HOH B . E 3 HOH 169 369 112 HOH HOH B . E 3 HOH 170 370 322 HOH HOH B . E 3 HOH 171 371 303 HOH HOH B . E 3 HOH 172 372 404 HOH HOH B . E 3 HOH 173 373 373 HOH HOH B . E 3 HOH 174 374 215 HOH HOH B . E 3 HOH 175 375 245 HOH HOH B . E 3 HOH 176 376 263 HOH HOH B . E 3 HOH 177 377 409 HOH HOH B . E 3 HOH 178 378 250 HOH HOH B . E 3 HOH 179 379 209 HOH HOH B . E 3 HOH 180 380 275 HOH HOH B . E 3 HOH 181 381 364 HOH HOH B . E 3 HOH 182 382 365 HOH HOH B . E 3 HOH 183 383 343 HOH HOH B . E 3 HOH 184 384 174 HOH HOH B . E 3 HOH 185 385 315 HOH HOH B . E 3 HOH 186 386 261 HOH HOH B . E 3 HOH 187 387 396 HOH HOH B . E 3 HOH 188 388 240 HOH HOH B . E 3 HOH 189 389 111 HOH HOH B . E 3 HOH 190 390 57 HOH HOH B . E 3 HOH 191 391 71 HOH HOH B . E 3 HOH 192 392 312 HOH HOH B . E 3 HOH 193 393 406 HOH HOH B . E 3 HOH 194 394 225 HOH HOH B . E 3 HOH 195 395 227 HOH HOH B . E 3 HOH 196 396 194 HOH HOH B . E 3 HOH 197 397 172 HOH HOH B . E 3 HOH 198 398 401 HOH HOH B . E 3 HOH 199 399 219 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D 2 1 B,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-01-13 2 'Structure model' 1 1 2021-01-27 3 'Structure model' 1 2 2022-05-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' entity 2 2 'Structure model' entity_name_com 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 3 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_entity.pdbx_ec' 2 2 'Structure model' '_entity_name_com.name' 3 3 'Structure model' '_citation.country' 4 3 'Structure model' '_citation.journal_abbrev' 5 3 'Structure model' '_citation.journal_id_CSD' 6 3 'Structure model' '_citation.journal_id_ISSN' 7 3 'Structure model' '_citation.journal_volume' 8 3 'Structure model' '_citation.pdbx_database_id_DOI' 9 3 'Structure model' '_citation.pdbx_database_id_PubMed' 10 3 'Structure model' '_citation.title' 11 3 'Structure model' '_citation.year' 12 3 'Structure model' '_database_2.pdbx_DOI' 13 3 'Structure model' '_database_2.pdbx_database_accession' # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 BUSTER '2.10.3 (20-MAY-2020)' ? program 'Gerard Bricogne' buster-develop@GlobalPhasing.com refinement http://www.globalphasing.com/buster/ ? ? 2 Aimless 0.7.4 13/12/18 program 'Phil Evans' ? 'data scaling' http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html ? ? 3 PDB_EXTRACT 3.23 'SEP. 23, 2016' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 XDS . ? program ? ? 'data reduction' ? ? ? 5 REFMAC . ? program ? ? phasing ? ? ? # _pdbx_entry_details.entry_id 5S2A _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 488 ? ? O A HOH 489 ? ? 1.63 2 1 O A HOH 426 ? ? O B HOH 383 ? ? 1.76 3 1 O B HOH 212 ? ? O B HOH 239 ? ? 1.87 4 1 O B HOH 353 ? ? O B HOH 384 ? ? 1.95 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 86 ? ? 54.90 -128.20 2 1 HIS B 86 ? ? 53.32 -125.66 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 1 ? A SER 1 2 1 Y 1 A MET 2 ? A MET 2 3 1 Y 1 A VAL 3 ? A VAL 3 4 1 Y 1 A ASN 4 ? A ASN 4 # _pdbx_deposit_group.group_id G_1002176 _pdbx_deposit_group.group_description 'SARS-CoV-2 Nsp3 macrodomain crystallographic fragment screen with EU-OPENSCREEN fragment library' _pdbx_deposit_group.group_title 'PanDDA analysis group deposition' _pdbx_deposit_group.group_type 'changed state' # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id WS4 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id WS4 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'N-(4-hydroxyphenyl)-1-methyl-1H-pyrazole-4-carboxamide' WS4 3 water HOH #