data_5SCZ # _entry.id 5SCZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5SCZ pdb_00005scz 10.2210/pdb5scz/pdb WWPDB D_1001404352 ? ? # _pdbx_database_status.entry_id 5SCZ _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.recvd_initial_deposition_date 2021-12-20 _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # _audit_author.name 'Seattle Structural Genomics Center for Infectious Disease (SSGCID)' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID ? # _citation.id primary _citation.journal_abbrev 'to be published' _citation.title 'Crystal Structure of Dihydrofolate Reductase from Mycobacterium tuberculosis bound to NADP and SDDC Inhibitor SDDC-1224' _citation.year ? _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mayclin, S.J.' 1 ? primary 'Fairman, J.W.' 2 ? primary 'Dranow, D.M.' 3 ? primary 'Conrady, D.G.' 4 ? primary 'Fox III, D.' 5 ? primary 'Lukacs, C.M.' 6 ? primary 'Lorimer, D.D.' 7 ? primary 'Horanyi, P.S.' 8 ? primary 'Edwards, T.E.' 9 ? primary 'Abendroth, J.' 10 ? # _cell.entry_id 5SCZ _cell.length_a 29.500 _cell.length_b 67.220 _cell.length_c 72.330 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SCZ _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Dihydrofolate reductase' 19832.365 1 1.5.1.3 ? MtDHFR ? 2 non-polymer syn 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 743.405 1 ? ? ? ? 3 non-polymer syn '(2E)-3-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}pyridin-3-yl)prop-2-en-1-ol' 345.396 1 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 6 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 7 non-polymer syn 'FORMIC ACID' 46.025 2 ? ? ? ? 8 water nat water 18.015 212 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSHMVGLIWAQATSGVIGRGGDIPWRLPEDQAHFREITMGHTIVMGRRTWDSLPAKVRPLPGR RNVVLSRQADFMASGAEVVGSLEEALTSPETWVIGGGQVYALALPYATRCEVTEVDIGLPREAGDALAPVLDETWRGETG EWRFSRSGLRYRLYSYHRS ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSHMVGLIWAQATSGVIGRGGDIPWRLPEDQAHFREITMGHTIVMGRRTWDSLPAKVRPLPGR RNVVLSRQADFMASGAEVVGSLEEALTSPETWVIGGGQVYALALPYATRCEVTEVDIGLPREAGDALAPVLDETWRGETG EWRFSRSGLRYRLYSYHRS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 VAL n 1 23 GLY n 1 24 LEU n 1 25 ILE n 1 26 TRP n 1 27 ALA n 1 28 GLN n 1 29 ALA n 1 30 THR n 1 31 SER n 1 32 GLY n 1 33 VAL n 1 34 ILE n 1 35 GLY n 1 36 ARG n 1 37 GLY n 1 38 GLY n 1 39 ASP n 1 40 ILE n 1 41 PRO n 1 42 TRP n 1 43 ARG n 1 44 LEU n 1 45 PRO n 1 46 GLU n 1 47 ASP n 1 48 GLN n 1 49 ALA n 1 50 HIS n 1 51 PHE n 1 52 ARG n 1 53 GLU n 1 54 ILE n 1 55 THR n 1 56 MET n 1 57 GLY n 1 58 HIS n 1 59 THR n 1 60 ILE n 1 61 VAL n 1 62 MET n 1 63 GLY n 1 64 ARG n 1 65 ARG n 1 66 THR n 1 67 TRP n 1 68 ASP n 1 69 SER n 1 70 LEU n 1 71 PRO n 1 72 ALA n 1 73 LYS n 1 74 VAL n 1 75 ARG n 1 76 PRO n 1 77 LEU n 1 78 PRO n 1 79 GLY n 1 80 ARG n 1 81 ARG n 1 82 ASN n 1 83 VAL n 1 84 VAL n 1 85 LEU n 1 86 SER n 1 87 ARG n 1 88 GLN n 1 89 ALA n 1 90 ASP n 1 91 PHE n 1 92 MET n 1 93 ALA n 1 94 SER n 1 95 GLY n 1 96 ALA n 1 97 GLU n 1 98 VAL n 1 99 VAL n 1 100 GLY n 1 101 SER n 1 102 LEU n 1 103 GLU n 1 104 GLU n 1 105 ALA n 1 106 LEU n 1 107 THR n 1 108 SER n 1 109 PRO n 1 110 GLU n 1 111 THR n 1 112 TRP n 1 113 VAL n 1 114 ILE n 1 115 GLY n 1 116 GLY n 1 117 GLY n 1 118 GLN n 1 119 VAL n 1 120 TYR n 1 121 ALA n 1 122 LEU n 1 123 ALA n 1 124 LEU n 1 125 PRO n 1 126 TYR n 1 127 ALA n 1 128 THR n 1 129 ARG n 1 130 CYS n 1 131 GLU n 1 132 VAL n 1 133 THR n 1 134 GLU n 1 135 VAL n 1 136 ASP n 1 137 ILE n 1 138 GLY n 1 139 LEU n 1 140 PRO n 1 141 ARG n 1 142 GLU n 1 143 ALA n 1 144 GLY n 1 145 ASP n 1 146 ALA n 1 147 LEU n 1 148 ALA n 1 149 PRO n 1 150 VAL n 1 151 LEU n 1 152 ASP n 1 153 GLU n 1 154 THR n 1 155 TRP n 1 156 ARG n 1 157 GLY n 1 158 GLU n 1 159 THR n 1 160 GLY n 1 161 GLU n 1 162 TRP n 1 163 ARG n 1 164 PHE n 1 165 SER n 1 166 ARG n 1 167 SER n 1 168 GLY n 1 169 LEU n 1 170 ARG n 1 171 TYR n 1 172 ARG n 1 173 LEU n 1 174 TYR n 1 175 SER n 1 176 TYR n 1 177 HIS n 1 178 ARG n 1 179 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 179 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'folA, dfrA, Rv2763c, MTV002.28c' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 25618 / H37Rv' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis H37Rv' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83332 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DYR_MYCTU _struct_ref.pdbx_db_accession P9WNX1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MVGLIWAQATSGVIGRGGDIPWRLPEDQAHFREITMGHTIVMGRRTWDSLPAKVRPLPGRRNVVLSRQADFMASGAEVVG SLEEALTSPETWVIGGGQVYALALPYATRCEVTEVDIGLPREAGDALAPVLDETWRGETGEWRFSRSGLRYRLYSYHRS ; _struct_ref.pdbx_align_begin 3 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5SCZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 21 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 179 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P9WNX1 _struct_ref_seq.db_align_beg 3 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 161 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 159 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5SCZ MET A 1 ? UNP P9WNX1 ? ? 'initiating methionine' -19 1 1 5SCZ GLY A 2 ? UNP P9WNX1 ? ? 'expression tag' -18 2 1 5SCZ SER A 3 ? UNP P9WNX1 ? ? 'expression tag' -17 3 1 5SCZ SER A 4 ? UNP P9WNX1 ? ? 'expression tag' -16 4 1 5SCZ HIS A 5 ? UNP P9WNX1 ? ? 'expression tag' -15 5 1 5SCZ HIS A 6 ? UNP P9WNX1 ? ? 'expression tag' -14 6 1 5SCZ HIS A 7 ? UNP P9WNX1 ? ? 'expression tag' -13 7 1 5SCZ HIS A 8 ? UNP P9WNX1 ? ? 'expression tag' -12 8 1 5SCZ HIS A 9 ? UNP P9WNX1 ? ? 'expression tag' -11 9 1 5SCZ HIS A 10 ? UNP P9WNX1 ? ? 'expression tag' -10 10 1 5SCZ SER A 11 ? UNP P9WNX1 ? ? 'expression tag' -9 11 1 5SCZ SER A 12 ? UNP P9WNX1 ? ? 'expression tag' -8 12 1 5SCZ GLY A 13 ? UNP P9WNX1 ? ? 'expression tag' -7 13 1 5SCZ LEU A 14 ? UNP P9WNX1 ? ? 'expression tag' -6 14 1 5SCZ VAL A 15 ? UNP P9WNX1 ? ? 'expression tag' -5 15 1 5SCZ PRO A 16 ? UNP P9WNX1 ? ? 'expression tag' -4 16 1 5SCZ ARG A 17 ? UNP P9WNX1 ? ? 'expression tag' -3 17 1 5SCZ GLY A 18 ? UNP P9WNX1 ? ? 'expression tag' -2 18 1 5SCZ SER A 19 ? UNP P9WNX1 ? ? 'expression tag' -1 19 1 5SCZ HIS A 20 ? UNP P9WNX1 ? ? 'expression tag' 0 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HI9 non-polymer . '(2E)-3-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}pyridin-3-yl)prop-2-en-1-ol' ? 'C17 H23 N5 O3' 345.396 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NAP non-polymer . 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' ;2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE ; 'C21 H28 N7 O17 P3' 743.405 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 5SCZ _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 32 _exptl_crystal.density_Matthews 1.8 _exptl_crystal.pdbx_mosaicity 0.144 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH . _exptl_crystal_grow.temp 289 _exptl_crystal_grow.pdbx_details ;MCSG4 F7 (291329f7): 200mM magnesium formate, 100mM MES:NaOH pH6.5, 25% (w/v) PEG4000, 10mg/mL protein conc., cryo 15% ethylene glycol, puck pwp0-16 ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.crystal_id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PAD _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2017-05-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97949 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CLSI BEAMLINE 08ID-1' _diffrn_source.pdbx_wavelength_list 0.97949 _diffrn_source.pdbx_synchrotron_site CLSI _diffrn_source.pdbx_synchrotron_beamline 08ID-1 _diffrn_source.pdbx_wavelength ? # _reflns.entry_id 5SCZ _reflns.pdbx_diffrn_id 1 _reflns.d_resolution_high 1.750 _reflns.d_resolution_low 50 _reflns.pdbx_number_measured_all 83319 _reflns.number_obs 15004 _reflns.pdbx_Rmerge_I_obs 0.072 _reflns.pdbx_netI_over_sigmaI 18.870 _reflns.percent_possible_obs 99.100 _reflns.B_iso_Wilson_estimate 20.876 _reflns.Rmerge_F_obs 0.998 _reflns.observed_criterion_sigma_I -3.000 _reflns.pdbx_Rrim_I_all 0.079 _reflns.pdbx_ordinal 1 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_Rpim_I_all ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star 1.750 1.800 2986 ? 997 ? 0.296 3.840 ? ? ? ? ? 1079 ? ? 0.920 ? ? 92.400 0.358 ? ? 1 ? ? 1.800 1.840 3929 ? 1069 ? 0.254 5.150 ? ? ? ? ? 1094 ? ? 0.956 ? ? 97.700 0.298 ? ? 2 ? ? 1.840 1.900 4646 ? 1012 ? 0.214 7.260 ? ? ? ? ? 1017 ? ? 0.972 ? ? 99.500 0.242 ? ? 3 ? ? 1.900 1.960 5520 ? 1014 ? 0.169 9.530 ? ? ? ? ? 1015 ? ? 0.986 ? ? 99.900 0.187 ? ? 4 ? ? 1.960 2.020 6110 ? 993 ? 0.155 11.920 ? ? ? ? ? 994 ? ? 0.987 ? ? 99.900 0.170 ? ? 5 ? ? 2.020 2.090 5720 ? 942 ? 0.142 12.730 ? ? ? ? ? 943 ? ? 0.990 ? ? 99.900 0.155 ? ? 6 ? ? 2.090 2.170 5356 ? 917 ? 0.111 14.920 ? ? ? ? ? 919 ? ? 0.993 ? ? 99.800 0.122 ? ? 7 ? ? 2.170 2.260 5360 ? 888 ? 0.105 15.980 ? ? ? ? ? 893 ? ? 0.996 ? ? 99.400 0.115 ? ? 8 ? ? 2.260 2.360 5253 ? 846 ? 0.095 17.990 ? ? ? ? ? 847 ? ? 0.996 ? ? 99.900 0.104 ? ? 9 ? ? 2.360 2.470 5038 ? 820 ? 0.088 19.490 ? ? ? ? ? 820 ? ? 0.995 ? ? 100.000 0.096 ? ? 10 ? ? 2.470 2.610 4644 ? 785 ? 0.077 22.320 ? ? ? ? ? 786 ? ? 0.997 ? ? 99.900 0.084 ? ? 11 ? ? 2.610 2.770 4351 ? 725 ? 0.070 24.140 ? ? ? ? ? 727 ? ? 0.997 ? ? 99.700 0.077 ? ? 12 ? ? 2.770 2.960 4524 ? 713 ? 0.079 27.880 ? ? ? ? ? 714 ? ? 0.997 ? ? 99.900 0.086 ? ? 13 ? ? 2.960 3.200 4191 ? 656 ? 0.075 30.920 ? ? ? ? ? 657 ? ? 0.996 ? ? 99.800 0.082 ? ? 14 ? ? 3.200 3.500 3606 ? 593 ? 0.060 34.200 ? ? ? ? ? 593 ? ? 0.998 ? ? 100.000 0.066 ? ? 15 ? ? 3.500 3.910 3442 ? 559 ? 0.049 37.960 ? ? ? ? ? 559 ? ? 0.997 ? ? 100.000 0.054 ? ? 16 ? ? 3.910 4.520 3073 ? 495 ? 0.042 40.390 ? ? ? ? ? 495 ? ? 0.999 ? ? 100.000 0.045 ? ? 17 ? ? 4.520 5.530 2503 ? 430 ? 0.041 39.050 ? ? ? ? ? 431 ? ? 0.998 ? ? 99.800 0.045 ? ? 18 ? ? 5.530 7.830 2014 ? 341 ? 0.041 36.020 ? ? ? ? ? 341 ? ? 0.998 ? ? 100.000 0.046 ? ? 19 ? ? 7.830 ? 1053 ? 209 ? 0.033 39.050 ? ? ? ? ? 209 ? ? 0.998 ? ? 100.000 0.037 ? ? 20 ? ? # _refine.entry_id 5SCZ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 1.7500 _refine.ls_d_res_low 49.2390 _refine.pdbx_ls_sigma_F 1.370 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.0200 _refine.ls_number_reflns_obs 14985 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1510 _refine.ls_R_factor_R_work 0.1464 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1951 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 9.3400 _refine.ls_number_reflns_R_free 1400 _refine.ls_number_reflns_R_work 13585 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 16.6887 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.1800 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 58.870 _refine.B_iso_min 4.430 _refine.pdbx_overall_phase_error 19.9900 _refine.occupancy_max 1.000 _refine.occupancy_min 0.150 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1294 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 89 _refine_hist.number_atoms_solvent 212 _refine_hist.number_atoms_total 1595 _refine_hist.d_res_high 1.7500 _refine_hist.d_res_low 49.2390 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' f_bond_d 1460 0.006 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 1995 0.879 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 209 0.052 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 274 0.006 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 872 19.882 ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.R_factor_obs 1.7501 1.8127 10 94.0000 1245 . 0.2187 0.2559 . 132 . 1377 . 'X-RAY DIFFRACTION' . 1.8127 1.8852 10 98.0000 1332 . 0.2031 0.3017 . 123 . 1455 . 'X-RAY DIFFRACTION' . 1.8852 1.9710 10 100.0000 1358 . 0.1707 0.2810 . 144 . 1502 . 'X-RAY DIFFRACTION' . 1.9710 2.0750 10 100.0000 1322 . 0.1566 0.1882 . 147 . 1469 . 'X-RAY DIFFRACTION' . 2.0750 2.2050 10 99.0000 1357 . 0.1519 0.1979 . 118 . 1475 . 'X-RAY DIFFRACTION' . 2.2050 2.3752 10 100.0000 1376 . 0.1566 0.2226 . 121 . 1497 . 'X-RAY DIFFRACTION' . 2.3752 2.6142 10 100.0000 1368 . 0.1479 0.2053 . 143 . 1511 . 'X-RAY DIFFRACTION' . 2.6142 2.9924 10 100.0000 1351 . 0.1435 0.1814 . 173 . 1524 . 'X-RAY DIFFRACTION' . 2.9924 3.7700 10 100.0000 1390 . 0.1221 0.1708 . 149 . 1539 . 'X-RAY DIFFRACTION' . 3.7700 49.2587 10 100.0000 1486 . 0.1262 0.1597 . 150 . 1636 . 'X-RAY DIFFRACTION' . # _struct.entry_id 5SCZ _struct.title 'Crystal Structure of Dihydrofolate Reductase from Mycobacterium tuberculosis bound to NADP and SDDC Inhibitor SDDC-1224' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5SCZ _struct_keywords.text ;Mycobacterium tuberculosis, DHFR, NADP, Folate, OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR complex, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, SSGCID ; _struct_keywords.pdbx_keywords 'OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 7 ? I N N 7 ? J N N 8 ? # _struct_biol.id 1 _struct_biol.details 'biological unit is a monomer, the same as asu' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LEU A 44 ? MET A 56 ? LEU A 24 MET A 36 1 ? 13 HELX_P HELX_P2 AA2 ARG A 64 ? LEU A 70 ? ARG A 44 LEU A 50 1 ? 7 HELX_P HELX_P3 AA3 PRO A 71 ? ARG A 75 ? PRO A 51 ARG A 55 5 ? 5 HELX_P HELX_P4 AA4 SER A 101 ? LEU A 106 ? SER A 81 LEU A 86 1 ? 6 HELX_P HELX_P5 AA5 GLY A 116 ? LEU A 124 ? GLY A 96 LEU A 104 1 ? 9 HELX_P HELX_P6 AA6 PRO A 125 ? ALA A 127 ? PRO A 105 ALA A 107 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLU 131 O ? ? ? 1_555 D NA . NA ? ? A GLU 111 A NA 203 1_555 ? ? ? ? ? ? ? 3.160 ? ? metalc2 metalc ? ? A THR 133 OG1 ? ? ? 1_555 D NA . NA ? ? A THR 113 A NA 203 1_555 ? ? ? ? ? ? ? 2.874 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ARG 75 A . ? ARG 55 A PRO 76 A ? PRO 56 A 1 0.64 2 GLY 115 A . ? GLY 95 A GLY 116 A ? GLY 96 A 1 -1.34 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 8 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA2 5 6 ? parallel AA2 6 7 ? anti-parallel AA2 7 8 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 97 ? VAL A 99 ? GLU A 77 VAL A 79 AA1 2 ARG A 81 ? LEU A 85 ? ARG A 61 LEU A 65 AA1 3 THR A 59 ? GLY A 63 ? THR A 39 GLY A 43 AA1 4 GLU A 110 ? VAL A 113 ? GLU A 90 VAL A 93 AA1 5 MET A 21 ? ALA A 29 ? MET A 1 ALA A 9 AA1 6 ARG A 129 ? VAL A 135 ? ARG A 109 VAL A 115 AA1 7 ARG A 170 ? HIS A 177 ? ARG A 150 HIS A 157 AA1 8 ARG A 156 ? THR A 159 ? ARG A 136 THR A 139 AA2 1 GLU A 97 ? VAL A 99 ? GLU A 77 VAL A 79 AA2 2 ARG A 81 ? LEU A 85 ? ARG A 61 LEU A 65 AA2 3 THR A 59 ? GLY A 63 ? THR A 39 GLY A 43 AA2 4 GLU A 110 ? VAL A 113 ? GLU A 90 VAL A 93 AA2 5 MET A 21 ? ALA A 29 ? MET A 1 ALA A 9 AA2 6 ARG A 129 ? VAL A 135 ? ARG A 109 VAL A 115 AA2 7 ARG A 170 ? HIS A 177 ? ARG A 150 HIS A 157 AA2 8 ARG A 163 ? PHE A 164 ? ARG A 143 PHE A 144 AA3 1 VAL A 33 ? GLY A 35 ? VAL A 13 GLY A 15 AA3 2 ALA A 146 ? LEU A 147 ? ALA A 126 LEU A 127 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLU A 97 ? O GLU A 77 N VAL A 84 ? N VAL A 64 AA1 2 3 O ARG A 81 ? O ARG A 61 N ILE A 60 ? N ILE A 40 AA1 3 4 N THR A 59 ? N THR A 39 O TRP A 112 ? O TRP A 92 AA1 4 5 O VAL A 113 ? O VAL A 93 N GLY A 23 ? N GLY A 3 AA1 5 6 N GLN A 28 ? N GLN A 8 O THR A 133 ? O THR A 113 AA1 6 7 N GLU A 134 ? N GLU A 114 O ARG A 172 ? O ARG A 152 AA1 7 8 O SER A 175 ? O SER A 155 N GLU A 158 ? N GLU A 138 AA2 1 2 O GLU A 97 ? O GLU A 77 N VAL A 84 ? N VAL A 64 AA2 2 3 O ARG A 81 ? O ARG A 61 N ILE A 60 ? N ILE A 40 AA2 3 4 N THR A 59 ? N THR A 39 O TRP A 112 ? O TRP A 92 AA2 4 5 O VAL A 113 ? O VAL A 93 N GLY A 23 ? N GLY A 3 AA2 5 6 N GLN A 28 ? N GLN A 8 O THR A 133 ? O THR A 113 AA2 6 7 N GLU A 134 ? N GLU A 114 O ARG A 172 ? O ARG A 152 AA2 7 8 O TYR A 171 ? O TYR A 151 N ARG A 163 ? N ARG A 143 AA3 1 2 N ILE A 34 ? N ILE A 14 O ALA A 146 ? O ALA A 126 # _atom_sites.entry_id 5SCZ _atom_sites.fract_transf_matrix[1][1] 0.033898 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014877 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013826 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -19 ? ? ? A . n A 1 2 GLY 2 -18 ? ? ? A . n A 1 3 SER 3 -17 ? ? ? A . n A 1 4 SER 4 -16 ? ? ? A . n A 1 5 HIS 5 -15 ? ? ? A . n A 1 6 HIS 6 -14 ? ? ? A . n A 1 7 HIS 7 -13 ? ? ? A . n A 1 8 HIS 8 -12 ? ? ? A . n A 1 9 HIS 9 -11 ? ? ? A . n A 1 10 HIS 10 -10 ? ? ? A . n A 1 11 SER 11 -9 ? ? ? A . n A 1 12 SER 12 -8 ? ? ? A . n A 1 13 GLY 13 -7 ? ? ? A . n A 1 14 LEU 14 -6 -6 LEU LEU A . n A 1 15 VAL 15 -5 -5 VAL VAL A . n A 1 16 PRO 16 -4 -4 PRO PRO A . n A 1 17 ARG 17 -3 -3 ARG ARG A . n A 1 18 GLY 18 -2 -2 GLY GLY A . n A 1 19 SER 19 -1 -1 SER SER A . n A 1 20 HIS 20 0 0 HIS HIS A . n A 1 21 MET 21 1 1 MET MET A . n A 1 22 VAL 22 2 2 VAL VAL A . n A 1 23 GLY 23 3 3 GLY GLY A . n A 1 24 LEU 24 4 4 LEU LEU A . n A 1 25 ILE 25 5 5 ILE ILE A . n A 1 26 TRP 26 6 6 TRP TRP A . n A 1 27 ALA 27 7 7 ALA ALA A . n A 1 28 GLN 28 8 8 GLN GLN A . n A 1 29 ALA 29 9 9 ALA ALA A . n A 1 30 THR 30 10 10 THR THR A . n A 1 31 SER 31 11 11 SER SER A . n A 1 32 GLY 32 12 12 GLY GLY A . n A 1 33 VAL 33 13 13 VAL VAL A . n A 1 34 ILE 34 14 14 ILE ILE A . n A 1 35 GLY 35 15 15 GLY GLY A . n A 1 36 ARG 36 16 16 ARG ARG A . n A 1 37 GLY 37 17 17 GLY GLY A . n A 1 38 GLY 38 18 18 GLY GLY A . n A 1 39 ASP 39 19 19 ASP ASP A . n A 1 40 ILE 40 20 20 ILE ILE A . n A 1 41 PRO 41 21 21 PRO PRO A . n A 1 42 TRP 42 22 22 TRP TRP A . n A 1 43 ARG 43 23 23 ARG ARG A . n A 1 44 LEU 44 24 24 LEU LEU A . n A 1 45 PRO 45 25 25 PRO PRO A . n A 1 46 GLU 46 26 26 GLU GLU A . n A 1 47 ASP 47 27 27 ASP ASP A . n A 1 48 GLN 48 28 28 GLN GLN A . n A 1 49 ALA 49 29 29 ALA ALA A . n A 1 50 HIS 50 30 30 HIS HIS A . n A 1 51 PHE 51 31 31 PHE PHE A . n A 1 52 ARG 52 32 32 ARG ARG A . n A 1 53 GLU 53 33 33 GLU GLU A . n A 1 54 ILE 54 34 34 ILE ILE A . n A 1 55 THR 55 35 35 THR THR A . n A 1 56 MET 56 36 36 MET MET A . n A 1 57 GLY 57 37 37 GLY GLY A . n A 1 58 HIS 58 38 38 HIS HIS A . n A 1 59 THR 59 39 39 THR THR A . n A 1 60 ILE 60 40 40 ILE ILE A . n A 1 61 VAL 61 41 41 VAL VAL A . n A 1 62 MET 62 42 42 MET MET A . n A 1 63 GLY 63 43 43 GLY GLY A . n A 1 64 ARG 64 44 44 ARG ARG A . n A 1 65 ARG 65 45 45 ARG ARG A . n A 1 66 THR 66 46 46 THR THR A . n A 1 67 TRP 67 47 47 TRP TRP A . n A 1 68 ASP 68 48 48 ASP ASP A . n A 1 69 SER 69 49 49 SER SER A . n A 1 70 LEU 70 50 50 LEU LEU A . n A 1 71 PRO 71 51 51 PRO PRO A . n A 1 72 ALA 72 52 52 ALA ALA A . n A 1 73 LYS 73 53 53 LYS LYS A . n A 1 74 VAL 74 54 54 VAL VAL A . n A 1 75 ARG 75 55 55 ARG ARG A . n A 1 76 PRO 76 56 56 PRO PRO A . n A 1 77 LEU 77 57 57 LEU LEU A . n A 1 78 PRO 78 58 58 PRO PRO A . n A 1 79 GLY 79 59 59 GLY GLY A . n A 1 80 ARG 80 60 60 ARG ARG A . n A 1 81 ARG 81 61 61 ARG ARG A . n A 1 82 ASN 82 62 62 ASN ASN A . n A 1 83 VAL 83 63 63 VAL VAL A . n A 1 84 VAL 84 64 64 VAL VAL A . n A 1 85 LEU 85 65 65 LEU LEU A . n A 1 86 SER 86 66 66 SER SER A . n A 1 87 ARG 87 67 67 ARG ARG A . n A 1 88 GLN 88 68 68 GLN GLN A . n A 1 89 ALA 89 69 69 ALA ALA A . n A 1 90 ASP 90 70 70 ASP ASP A . n A 1 91 PHE 91 71 71 PHE PHE A . n A 1 92 MET 92 72 72 MET MET A . n A 1 93 ALA 93 73 73 ALA ALA A . n A 1 94 SER 94 74 74 SER SER A . n A 1 95 GLY 95 75 75 GLY GLY A . n A 1 96 ALA 96 76 76 ALA ALA A . n A 1 97 GLU 97 77 77 GLU GLU A . n A 1 98 VAL 98 78 78 VAL VAL A . n A 1 99 VAL 99 79 79 VAL VAL A . n A 1 100 GLY 100 80 80 GLY GLY A . n A 1 101 SER 101 81 81 SER SER A . n A 1 102 LEU 102 82 82 LEU LEU A . n A 1 103 GLU 103 83 83 GLU GLU A . n A 1 104 GLU 104 84 84 GLU GLU A . n A 1 105 ALA 105 85 85 ALA ALA A . n A 1 106 LEU 106 86 86 LEU LEU A . n A 1 107 THR 107 87 87 THR THR A . n A 1 108 SER 108 88 88 SER SER A . n A 1 109 PRO 109 89 89 PRO PRO A . n A 1 110 GLU 110 90 90 GLU GLU A . n A 1 111 THR 111 91 91 THR THR A . n A 1 112 TRP 112 92 92 TRP TRP A . n A 1 113 VAL 113 93 93 VAL VAL A . n A 1 114 ILE 114 94 94 ILE ILE A . n A 1 115 GLY 115 95 95 GLY GLY A . n A 1 116 GLY 116 96 96 GLY GLY A . n A 1 117 GLY 117 97 97 GLY GLY A . n A 1 118 GLN 118 98 98 GLN GLN A . n A 1 119 VAL 119 99 99 VAL VAL A . n A 1 120 TYR 120 100 100 TYR TYR A . n A 1 121 ALA 121 101 101 ALA ALA A . n A 1 122 LEU 122 102 102 LEU LEU A . n A 1 123 ALA 123 103 103 ALA ALA A . n A 1 124 LEU 124 104 104 LEU LEU A . n A 1 125 PRO 125 105 105 PRO PRO A . n A 1 126 TYR 126 106 106 TYR TYR A . n A 1 127 ALA 127 107 107 ALA ALA A . n A 1 128 THR 128 108 108 THR THR A . n A 1 129 ARG 129 109 109 ARG ARG A . n A 1 130 CYS 130 110 110 CYS CYS A . n A 1 131 GLU 131 111 111 GLU GLU A . n A 1 132 VAL 132 112 112 VAL VAL A . n A 1 133 THR 133 113 113 THR THR A . n A 1 134 GLU 134 114 114 GLU GLU A . n A 1 135 VAL 135 115 115 VAL VAL A . n A 1 136 ASP 136 116 116 ASP ASP A . n A 1 137 ILE 137 117 117 ILE ILE A . n A 1 138 GLY 138 118 118 GLY GLY A . n A 1 139 LEU 139 119 119 LEU LEU A . n A 1 140 PRO 140 120 120 PRO PRO A . n A 1 141 ARG 141 121 121 ARG ARG A . n A 1 142 GLU 142 122 122 GLU GLU A . n A 1 143 ALA 143 123 123 ALA ALA A . n A 1 144 GLY 144 124 124 GLY GLY A . n A 1 145 ASP 145 125 125 ASP ASP A . n A 1 146 ALA 146 126 126 ALA ALA A . n A 1 147 LEU 147 127 127 LEU LEU A . n A 1 148 ALA 148 128 128 ALA ALA A . n A 1 149 PRO 149 129 129 PRO PRO A . n A 1 150 VAL 150 130 130 VAL VAL A . n A 1 151 LEU 151 131 131 LEU LEU A . n A 1 152 ASP 152 132 132 ASP ASP A . n A 1 153 GLU 153 133 133 GLU GLU A . n A 1 154 THR 154 134 134 THR THR A . n A 1 155 TRP 155 135 135 TRP TRP A . n A 1 156 ARG 156 136 136 ARG ARG A . n A 1 157 GLY 157 137 137 GLY GLY A . n A 1 158 GLU 158 138 138 GLU GLU A . n A 1 159 THR 159 139 139 THR THR A . n A 1 160 GLY 160 140 140 GLY GLY A . n A 1 161 GLU 161 141 141 GLU GLU A . n A 1 162 TRP 162 142 142 TRP TRP A . n A 1 163 ARG 163 143 143 ARG ARG A . n A 1 164 PHE 164 144 144 PHE PHE A . n A 1 165 SER 165 145 145 SER SER A . n A 1 166 ARG 166 146 146 ARG ARG A . n A 1 167 SER 167 147 147 SER SER A . n A 1 168 GLY 168 148 148 GLY GLY A . n A 1 169 LEU 169 149 149 LEU LEU A . n A 1 170 ARG 170 150 150 ARG ARG A . n A 1 171 TYR 171 151 151 TYR TYR A . n A 1 172 ARG 172 152 152 ARG ARG A . n A 1 173 LEU 173 153 153 LEU LEU A . n A 1 174 TYR 174 154 154 TYR TYR A . n A 1 175 SER 175 155 155 SER SER A . n A 1 176 TYR 176 156 156 TYR TYR A . n A 1 177 HIS 177 157 157 HIS HIS A . n A 1 178 ARG 178 158 158 ARG ARG A . n A 1 179 SER 179 159 159 SER SER A . n # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 isabelle.phan@seattlechildrens.org Isabelle Phan ? 'principal investigator/group leader' 0000-0001-6873-3401 3 peter.myler@seattlechildrens.org Peter Myler ? 'principal investigator/group leader' 0000-0002-0056-0513 4 julie.early@seattlechildrens.org Julie Early ? 'principal investigator/group leader' 0000-0003-1224-2747 5 donald.lorimer@ucb.com Don Lorimer ? 'principal investigator/group leader' 0000-0002-9638-8083 6 peter.horanyi@ucb.com Peter Horanyi ? 'principal investigator/group leader' 0000-0003-2218-9986 7 tom.edwards@ucb.com Tom Edwards ? 'principal investigator/group leader' 0000-0002-0474-8003 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NIAID, National Institute of Allergy and Infectious Diseases' _pdbx_SG_project.full_name_of_center 'Seattle Structural Genomics Center for Infectious Disease' _pdbx_SG_project.initial_of_center SSGCID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP 1 201 160 NAP NAP A . C 3 HI9 1 202 161 HI9 224 A . D 4 NA 1 203 162 NA NA A . E 5 CL 1 204 163 CL CL A . F 6 EDO 1 205 165 EDO EDO A . G 6 EDO 1 206 166 EDO EDO A . H 7 FMT 1 207 167 FMT FMT A . I 7 FMT 1 208 168 FMT FMT A . J 8 HOH 1 301 294 HOH HOH A . J 8 HOH 2 302 375 HOH HOH A . J 8 HOH 3 303 284 HOH HOH A . J 8 HOH 4 304 263 HOH HOH A . J 8 HOH 5 305 361 HOH HOH A . J 8 HOH 6 306 392 HOH HOH A . J 8 HOH 7 307 292 HOH HOH A . J 8 HOH 8 308 337 HOH HOH A . J 8 HOH 9 309 271 HOH HOH A . J 8 HOH 10 310 341 HOH HOH A . J 8 HOH 11 311 201 HOH HOH A . J 8 HOH 12 312 276 HOH HOH A . J 8 HOH 13 313 307 HOH HOH A . J 8 HOH 14 314 299 HOH HOH A . J 8 HOH 15 315 265 HOH HOH A . J 8 HOH 16 316 198 HOH HOH A . J 8 HOH 17 317 390 HOH HOH A . J 8 HOH 18 318 194 HOH HOH A . J 8 HOH 19 319 405 HOH HOH A . J 8 HOH 20 320 351 HOH HOH A . J 8 HOH 21 321 245 HOH HOH A . J 8 HOH 22 322 178 HOH HOH A . J 8 HOH 23 323 256 HOH HOH A . J 8 HOH 24 324 215 HOH HOH A . J 8 HOH 25 325 397 HOH HOH A . J 8 HOH 26 326 181 HOH HOH A . J 8 HOH 27 327 420 HOH HOH A . J 8 HOH 28 328 416 HOH HOH A . J 8 HOH 29 329 239 HOH HOH A . J 8 HOH 30 330 234 HOH HOH A . J 8 HOH 31 331 176 HOH HOH A . J 8 HOH 32 332 407 HOH HOH A . J 8 HOH 33 333 222 HOH HOH A . J 8 HOH 34 334 323 HOH HOH A . J 8 HOH 35 335 246 HOH HOH A . J 8 HOH 36 336 296 HOH HOH A . J 8 HOH 37 337 187 HOH HOH A . J 8 HOH 38 338 321 HOH HOH A . J 8 HOH 39 339 202 HOH HOH A . J 8 HOH 40 340 336 HOH HOH A . J 8 HOH 41 341 186 HOH HOH A . J 8 HOH 42 342 369 HOH HOH A . J 8 HOH 43 343 188 HOH HOH A . J 8 HOH 44 344 286 HOH HOH A . J 8 HOH 45 345 218 HOH HOH A . J 8 HOH 46 346 177 HOH HOH A . J 8 HOH 47 347 184 HOH HOH A . J 8 HOH 48 348 252 HOH HOH A . J 8 HOH 49 349 235 HOH HOH A . J 8 HOH 50 350 277 HOH HOH A . J 8 HOH 51 351 335 HOH HOH A . J 8 HOH 52 352 231 HOH HOH A . J 8 HOH 53 353 208 HOH HOH A . J 8 HOH 54 354 224 HOH HOH A . J 8 HOH 55 355 219 HOH HOH A . J 8 HOH 56 356 200 HOH HOH A . J 8 HOH 57 357 285 HOH HOH A . J 8 HOH 58 358 260 HOH HOH A . J 8 HOH 59 359 185 HOH HOH A . J 8 HOH 60 360 205 HOH HOH A . J 8 HOH 61 361 269 HOH HOH A . J 8 HOH 62 362 199 HOH HOH A . J 8 HOH 63 363 262 HOH HOH A . J 8 HOH 64 364 167 HOH HOH A . J 8 HOH 65 365 396 HOH HOH A . J 8 HOH 66 366 251 HOH HOH A . J 8 HOH 67 367 214 HOH HOH A . J 8 HOH 68 368 163 HOH HOH A . J 8 HOH 69 369 221 HOH HOH A . J 8 HOH 70 370 203 HOH HOH A . J 8 HOH 71 371 230 HOH HOH A . J 8 HOH 72 372 238 HOH HOH A . J 8 HOH 73 373 172 HOH HOH A . J 8 HOH 74 374 386 HOH HOH A . J 8 HOH 75 375 242 HOH HOH A . J 8 HOH 76 376 212 HOH HOH A . J 8 HOH 77 377 362 HOH HOH A . J 8 HOH 78 378 174 HOH HOH A . J 8 HOH 79 379 278 HOH HOH A . J 8 HOH 80 380 281 HOH HOH A . J 8 HOH 81 381 365 HOH HOH A . J 8 HOH 82 382 220 HOH HOH A . J 8 HOH 83 383 173 HOH HOH A . J 8 HOH 84 384 267 HOH HOH A . J 8 HOH 85 385 342 HOH HOH A . J 8 HOH 86 386 168 HOH HOH A . J 8 HOH 87 387 268 HOH HOH A . J 8 HOH 88 388 249 HOH HOH A . J 8 HOH 89 389 372 HOH HOH A . J 8 HOH 90 390 243 HOH HOH A . J 8 HOH 91 391 254 HOH HOH A . J 8 HOH 92 392 261 HOH HOH A . J 8 HOH 93 393 264 HOH HOH A . J 8 HOH 94 394 303 HOH HOH A . J 8 HOH 95 395 182 HOH HOH A . J 8 HOH 96 396 293 HOH HOH A . J 8 HOH 97 397 225 HOH HOH A . J 8 HOH 98 398 258 HOH HOH A . J 8 HOH 99 399 282 HOH HOH A . J 8 HOH 100 400 189 HOH HOH A . J 8 HOH 101 401 280 HOH HOH A . J 8 HOH 102 402 334 HOH HOH A . J 8 HOH 103 403 164 HOH HOH A . J 8 HOH 104 404 326 HOH HOH A . J 8 HOH 105 405 364 HOH HOH A . J 8 HOH 106 406 291 HOH HOH A . J 8 HOH 107 407 171 HOH HOH A . J 8 HOH 108 408 382 HOH HOH A . J 8 HOH 109 409 210 HOH HOH A . J 8 HOH 110 410 166 HOH HOH A . J 8 HOH 111 411 241 HOH HOH A . J 8 HOH 112 412 195 HOH HOH A . J 8 HOH 113 413 312 HOH HOH A . J 8 HOH 114 414 192 HOH HOH A . J 8 HOH 115 415 366 HOH HOH A . J 8 HOH 116 416 229 HOH HOH A . J 8 HOH 117 417 300 HOH HOH A . J 8 HOH 118 418 373 HOH HOH A . J 8 HOH 119 419 424 HOH HOH A . J 8 HOH 120 420 223 HOH HOH A . J 8 HOH 121 421 233 HOH HOH A . J 8 HOH 122 422 183 HOH HOH A . J 8 HOH 123 423 232 HOH HOH A . J 8 HOH 124 424 370 HOH HOH A . J 8 HOH 125 425 350 HOH HOH A . J 8 HOH 126 426 287 HOH HOH A . J 8 HOH 127 427 309 HOH HOH A . J 8 HOH 128 428 393 HOH HOH A . J 8 HOH 129 429 255 HOH HOH A . J 8 HOH 130 430 329 HOH HOH A . J 8 HOH 131 431 213 HOH HOH A . J 8 HOH 132 432 275 HOH HOH A . J 8 HOH 133 433 196 HOH HOH A . J 8 HOH 134 434 228 HOH HOH A . J 8 HOH 135 435 379 HOH HOH A . J 8 HOH 136 436 216 HOH HOH A . J 8 HOH 137 437 348 HOH HOH A . J 8 HOH 138 438 273 HOH HOH A . J 8 HOH 139 439 381 HOH HOH A . J 8 HOH 140 440 388 HOH HOH A . J 8 HOH 141 441 325 HOH HOH A . J 8 HOH 142 442 429 HOH HOH A . J 8 HOH 143 443 240 HOH HOH A . J 8 HOH 144 444 227 HOH HOH A . J 8 HOH 145 445 352 HOH HOH A . J 8 HOH 146 446 395 HOH HOH A . J 8 HOH 147 447 315 HOH HOH A . J 8 HOH 148 448 290 HOH HOH A . J 8 HOH 149 449 314 HOH HOH A . J 8 HOH 150 450 410 HOH HOH A . J 8 HOH 151 451 298 HOH HOH A . J 8 HOH 152 452 338 HOH HOH A . J 8 HOH 153 453 288 HOH HOH A . J 8 HOH 154 454 236 HOH HOH A . J 8 HOH 155 455 327 HOH HOH A . J 8 HOH 156 456 394 HOH HOH A . J 8 HOH 157 457 399 HOH HOH A . J 8 HOH 158 458 244 HOH HOH A . J 8 HOH 159 459 297 HOH HOH A . J 8 HOH 160 460 385 HOH HOH A . J 8 HOH 161 461 400 HOH HOH A . J 8 HOH 162 462 180 HOH HOH A . J 8 HOH 163 463 419 HOH HOH A . J 8 HOH 164 464 423 HOH HOH A . J 8 HOH 165 465 206 HOH HOH A . J 8 HOH 166 466 304 HOH HOH A . J 8 HOH 167 467 408 HOH HOH A . J 8 HOH 168 468 377 HOH HOH A . J 8 HOH 169 469 333 HOH HOH A . J 8 HOH 170 470 305 HOH HOH A . J 8 HOH 171 471 401 HOH HOH A . J 8 HOH 172 472 389 HOH HOH A . J 8 HOH 173 473 247 HOH HOH A . J 8 HOH 174 474 295 HOH HOH A . J 8 HOH 175 475 331 HOH HOH A . J 8 HOH 176 476 428 HOH HOH A . J 8 HOH 177 477 322 HOH HOH A . J 8 HOH 178 478 320 HOH HOH A . J 8 HOH 179 479 270 HOH HOH A . J 8 HOH 180 480 302 HOH HOH A . J 8 HOH 181 481 353 HOH HOH A . J 8 HOH 182 482 380 HOH HOH A . J 8 HOH 183 483 343 HOH HOH A . J 8 HOH 184 484 421 HOH HOH A . J 8 HOH 185 485 319 HOH HOH A . J 8 HOH 186 486 301 HOH HOH A . J 8 HOH 187 487 253 HOH HOH A . J 8 HOH 188 488 248 HOH HOH A . J 8 HOH 189 489 418 HOH HOH A . J 8 HOH 190 490 266 HOH HOH A . J 8 HOH 191 491 289 HOH HOH A . J 8 HOH 192 492 209 HOH HOH A . J 8 HOH 193 493 317 HOH HOH A . J 8 HOH 194 494 257 HOH HOH A . J 8 HOH 195 495 403 HOH HOH A . J 8 HOH 196 496 422 HOH HOH A . J 8 HOH 197 497 425 HOH HOH A . J 8 HOH 198 498 237 HOH HOH A . J 8 HOH 199 499 357 HOH HOH A . J 8 HOH 200 500 387 HOH HOH A . J 8 HOH 201 501 404 HOH HOH A . J 8 HOH 202 502 427 HOH HOH A . J 8 HOH 203 503 368 HOH HOH A . J 8 HOH 204 504 306 HOH HOH A . J 8 HOH 205 505 413 HOH HOH A . J 8 HOH 206 506 417 HOH HOH A . J 8 HOH 207 507 217 HOH HOH A . J 8 HOH 208 508 426 HOH HOH A . J 8 HOH 209 509 371 HOH HOH A . J 8 HOH 210 510 412 HOH HOH A . J 8 HOH 211 511 274 HOH HOH A . J 8 HOH 212 512 414 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id O _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id GLU _pdbx_struct_conn_angle.ptnr1_label_seq_id 131 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id GLU _pdbx_struct_conn_angle.ptnr1_auth_seq_id 111 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id NA _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id D _pdbx_struct_conn_angle.ptnr2_label_comp_id NA _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id NA _pdbx_struct_conn_angle.ptnr2_auth_seq_id 203 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id OG1 _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id A _pdbx_struct_conn_angle.ptnr3_label_comp_id THR _pdbx_struct_conn_angle.ptnr3_label_seq_id 133 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id THR _pdbx_struct_conn_angle.ptnr3_auth_seq_id 113 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 141.6 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-02-09 2 'Structure model' 1 1 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Other 2 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_SG_project 2 2 'Structure model' pdbx_database_status 3 2 'Structure model' struct_keywords # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_database_status.SG_entry' 2 2 'Structure model' '_struct_keywords.text' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 14.4859 12.8034 6.7045 0.0855 0.0907 0.0921 0.0251 -0.0052 0.0053 0.3360 3.0238 3.2770 0.1873 0.3435 -2.4113 0.0433 -0.0034 -0.0376 0.0393 0.0739 0.0809 -0.1506 -0.1024 0.1301 'X-RAY DIFFRACTION' 2 ? refined 11.0468 -0.3536 23.3056 0.1445 0.0866 0.1172 -0.0096 -0.0156 0.0206 0.2352 0.9882 0.9891 -0.1028 -0.2295 0.5772 0.1768 -0.0957 -0.0047 -0.0713 -0.0621 -0.0501 0.2084 0.1573 -0.0218 'X-RAY DIFFRACTION' 3 ? refined 2.5458 7.9124 14.4854 0.0937 0.1373 0.1290 -0.0106 -0.0061 -0.0049 0.3381 2.0783 2.3716 -0.3987 0.1393 -0.9386 0.0451 0.0801 -0.2519 0.0800 -0.0747 0.1111 -0.0410 0.1090 -0.5933 'X-RAY DIFFRACTION' 4 ? refined 10.5824 -3.9059 5.0273 0.0698 0.0955 0.0787 -0.0081 -0.0030 -0.0027 0.9188 2.2499 1.7460 -0.2289 0.0544 -0.0455 0.0287 -0.0081 -0.0297 0.0521 -0.0966 0.0617 -0.0426 0.0924 -0.0772 'X-RAY DIFFRACTION' 5 ? refined 18.3608 2.7649 -1.5166 0.1441 0.1523 0.1631 -0.0066 0.0162 -0.0066 0.3735 5.3122 1.6137 -0.8387 -0.4095 -1.0273 -0.0889 0.1567 0.0316 -0.0869 0.1111 -0.3201 -0.3204 -0.0788 0.0593 'X-RAY DIFFRACTION' 6 ? refined 18.5673 6.2609 8.8095 0.0689 0.0756 0.0854 0.0045 -0.0038 -0.0188 0.3447 2.8107 3.1163 0.4724 -0.3690 -0.8354 0.0989 -0.0356 0.0270 -0.0170 0.0195 -0.0949 -0.1073 -0.0871 0.0454 'X-RAY DIFFRACTION' 7 ? refined 14.6690 6.1650 23.0169 0.1193 0.0983 0.1282 -0.0060 -0.0285 0.0173 0.9451 1.1075 1.3643 0.0187 -0.2896 1.1428 0.0268 -0.0146 0.1571 -0.1495 -0.0865 -0.1327 0.3000 0.0841 0.0992 'X-RAY DIFFRACTION' 8 ? refined 21.3834 14.7369 18.1391 0.1025 0.1398 0.1478 -0.0226 -0.0210 -0.0313 0.4766 2.5380 2.5685 0.1677 -0.8129 -1.1635 0.1397 -0.0377 0.1491 -0.2047 0.0604 -0.2642 -0.0183 -0.0954 0.1887 'X-RAY DIFFRACTION' 9 ? refined 7.8588 14.3068 23.2548 0.0995 0.1080 0.0831 -0.0223 -0.0084 0.0004 0.7138 1.4915 1.3942 -0.3428 -0.3478 0.0615 0.0604 0.0196 -0.0319 -0.0653 0.1632 0.0550 -0.0220 0.0280 -0.0616 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 0 A 0 ;chain 'A' and (resid -6 through 9 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 0 A 0 ;chain 'A' and (resid 10 through 24 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 0 A 0 ;chain 'A' and (resid 25 through 35 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 0 A 0 ;chain 'A' and (resid 36 through 76 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 0 A 0 ;chain 'A' and (resid 77 through 89 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 0 A 0 ;chain 'A' and (resid 90 through 106 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 7 7 A 0 A 0 ;chain 'A' and (resid 107 through 125 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 8 8 A 0 A 0 ;chain 'A' and (resid 126 through 139 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 9 9 A 0 A 0 ;chain 'A' and (resid 140 through 159 ) ; ? ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? dev_2744 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.11 4 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 6 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 7 # _pdbx_entry_details.entry_id 5SCZ _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 83 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 301 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.15 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 308 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 457 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_555 _pdbx_validate_symm_contact.dist 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 21 ? ? -83.54 30.68 2 1 LEU A 86 ? ? -107.16 55.91 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU -6 ? CG ? A LEU 14 CG 2 1 Y 1 A LEU -6 ? CD1 ? A LEU 14 CD1 3 1 Y 1 A LEU -6 ? CD2 ? A LEU 14 CD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -19 ? A MET 1 2 1 Y 1 A GLY -18 ? A GLY 2 3 1 Y 1 A SER -17 ? A SER 3 4 1 Y 1 A SER -16 ? A SER 4 5 1 Y 1 A HIS -15 ? A HIS 5 6 1 Y 1 A HIS -14 ? A HIS 6 7 1 Y 1 A HIS -13 ? A HIS 7 8 1 Y 1 A HIS -12 ? A HIS 8 9 1 Y 1 A HIS -11 ? A HIS 9 10 1 Y 1 A HIS -10 ? A HIS 10 11 1 Y 1 A SER -9 ? A SER 11 12 1 Y 1 A SER -8 ? A SER 12 13 1 Y 1 A GLY -7 ? A GLY 13 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number HHSN272201700059C _pdbx_audit_support.ordinal 1 # _pdbx_deposit_group.group_title 'DHFR structures, SSGCID' _pdbx_deposit_group.group_description 'human and M. tuberculosis DHFR structures bound to ligands' _pdbx_deposit_group.group_type 'ground state' _pdbx_deposit_group.group_id G_1002223 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id HI9 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id HI9 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' NAP 3 '(2E)-3-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}pyridin-3-yl)prop-2-en-1-ol' HI9 4 'SODIUM ION' NA 5 'CHLORIDE ION' CL 6 1,2-ETHANEDIOL EDO 7 'FORMIC ACID' FMT 8 water HOH #