data_5V8C # _entry.id 5V8C # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.321 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5V8C WWPDB D_1000227036 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5V8C _pdbx_database_status.recvd_initial_deposition_date 2017-03-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Amer, B.R.' 1 ? 'Sawaya, M.R.' 2 0000-0003-0874-9043 'Liauw, B.' 3 ? 'Fu, J.Y.' 4 ? 'Ton-That, H.' 5 ? 'Clubb, R.T.' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev MBio _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2150-7511 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 10 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Structure and Mechanism of LcpA, a Phosphotransferase That Mediates Glycosylation of a Gram-Positive Bacterial Cell Wall-Anchored Protein. ; _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1128/mBio.01580-18 _citation.pdbx_database_id_PubMed 30782654 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Siegel, S.D.' 1 ? primary 'Amer, B.R.' 2 ? primary 'Wu, C.' 3 ? primary 'Sawaya, M.R.' 4 ? primary 'Gosschalk, J.E.' 5 ? primary 'Clubb, R.T.' 6 ? primary 'Ton-That, H.' 7 0000-0003-1611-0469 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5V8C _cell.details ? _cell.formula_units_Z ? _cell.length_a 40.850 _cell.length_a_esd ? _cell.length_b 69.070 _cell.length_b_esd ? _cell.length_c 82.010 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5V8C _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcriptional regulator' 30964.828 1 ? ? 'UNP residues 71-363' ? 2 non-polymer syn 'COBALT (II) ION' 58.933 1 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 4 non-polymer syn '2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL' 354.436 1 ? ? ? ? 5 water nat water 18.015 6 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AHRPARVDIAMPTTSSPTAGETWLILGTDSRATVPGDQNRYGTTQEVEGSRADVIALVRPSQEGVTIINLPRDLTINSKG MELDRLATTYVPGPQNTVNALCTGLGIPTTHLVTIDMAQFATIIDSLGGIEVDVPEPVRDAYTGLNLSSAGRHRLSGIDA LALVRSRHPEILRDGRWVTMSQADGAQRRSQSTATVMQAVLSAIGQKASNPVSLHQLAHTVAGNITLDSGTGLSDLAALG RSASKARRAGATTIIDLPTGPRDESIIVSPNQESRDLLARYGYSPKTCRPAGA ; _entity_poly.pdbx_seq_one_letter_code_can ;AHRPARVDIAMPTTSSPTAGETWLILGTDSRATVPGDQNRYGTTQEVEGSRADVIALVRPSQEGVTIINLPRDLTINSKG MELDRLATTYVPGPQNTVNALCTGLGIPTTHLVTIDMAQFATIIDSLGGIEVDVPEPVRDAYTGLNLSSAGRHRLSGIDA LALVRSRHPEILRDGRWVTMSQADGAQRRSQSTATVMQAVLSAIGQKASNPVSLHQLAHTVAGNITLDSGTGLSDLAALG RSASKARRAGATTIIDLPTGPRDESIIVSPNQESRDLLARYGYSPKTCRPAGA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 HIS n 1 3 ARG n 1 4 PRO n 1 5 ALA n 1 6 ARG n 1 7 VAL n 1 8 ASP n 1 9 ILE n 1 10 ALA n 1 11 MET n 1 12 PRO n 1 13 THR n 1 14 THR n 1 15 SER n 1 16 SER n 1 17 PRO n 1 18 THR n 1 19 ALA n 1 20 GLY n 1 21 GLU n 1 22 THR n 1 23 TRP n 1 24 LEU n 1 25 ILE n 1 26 LEU n 1 27 GLY n 1 28 THR n 1 29 ASP n 1 30 SER n 1 31 ARG n 1 32 ALA n 1 33 THR n 1 34 VAL n 1 35 PRO n 1 36 GLY n 1 37 ASP n 1 38 GLN n 1 39 ASN n 1 40 ARG n 1 41 TYR n 1 42 GLY n 1 43 THR n 1 44 THR n 1 45 GLN n 1 46 GLU n 1 47 VAL n 1 48 GLU n 1 49 GLY n 1 50 SER n 1 51 ARG n 1 52 ALA n 1 53 ASP n 1 54 VAL n 1 55 ILE n 1 56 ALA n 1 57 LEU n 1 58 VAL n 1 59 ARG n 1 60 PRO n 1 61 SER n 1 62 GLN n 1 63 GLU n 1 64 GLY n 1 65 VAL n 1 66 THR n 1 67 ILE n 1 68 ILE n 1 69 ASN n 1 70 LEU n 1 71 PRO n 1 72 ARG n 1 73 ASP n 1 74 LEU n 1 75 THR n 1 76 ILE n 1 77 ASN n 1 78 SER n 1 79 LYS n 1 80 GLY n 1 81 MET n 1 82 GLU n 1 83 LEU n 1 84 ASP n 1 85 ARG n 1 86 LEU n 1 87 ALA n 1 88 THR n 1 89 THR n 1 90 TYR n 1 91 VAL n 1 92 PRO n 1 93 GLY n 1 94 PRO n 1 95 GLN n 1 96 ASN n 1 97 THR n 1 98 VAL n 1 99 ASN n 1 100 ALA n 1 101 LEU n 1 102 CYS n 1 103 THR n 1 104 GLY n 1 105 LEU n 1 106 GLY n 1 107 ILE n 1 108 PRO n 1 109 THR n 1 110 THR n 1 111 HIS n 1 112 LEU n 1 113 VAL n 1 114 THR n 1 115 ILE n 1 116 ASP n 1 117 MET n 1 118 ALA n 1 119 GLN n 1 120 PHE n 1 121 ALA n 1 122 THR n 1 123 ILE n 1 124 ILE n 1 125 ASP n 1 126 SER n 1 127 LEU n 1 128 GLY n 1 129 GLY n 1 130 ILE n 1 131 GLU n 1 132 VAL n 1 133 ASP n 1 134 VAL n 1 135 PRO n 1 136 GLU n 1 137 PRO n 1 138 VAL n 1 139 ARG n 1 140 ASP n 1 141 ALA n 1 142 TYR n 1 143 THR n 1 144 GLY n 1 145 LEU n 1 146 ASN n 1 147 LEU n 1 148 SER n 1 149 SER n 1 150 ALA n 1 151 GLY n 1 152 ARG n 1 153 HIS n 1 154 ARG n 1 155 LEU n 1 156 SER n 1 157 GLY n 1 158 ILE n 1 159 ASP n 1 160 ALA n 1 161 LEU n 1 162 ALA n 1 163 LEU n 1 164 VAL n 1 165 ARG n 1 166 SER n 1 167 ARG n 1 168 HIS n 1 169 PRO n 1 170 GLU n 1 171 ILE n 1 172 LEU n 1 173 ARG n 1 174 ASP n 1 175 GLY n 1 176 ARG n 1 177 TRP n 1 178 VAL n 1 179 THR n 1 180 MET n 1 181 SER n 1 182 GLN n 1 183 ALA n 1 184 ASP n 1 185 GLY n 1 186 ALA n 1 187 GLN n 1 188 ARG n 1 189 ARG n 1 190 SER n 1 191 GLN n 1 192 SER n 1 193 THR n 1 194 ALA n 1 195 THR n 1 196 VAL n 1 197 MET n 1 198 GLN n 1 199 ALA n 1 200 VAL n 1 201 LEU n 1 202 SER n 1 203 ALA n 1 204 ILE n 1 205 GLY n 1 206 GLN n 1 207 LYS n 1 208 ALA n 1 209 SER n 1 210 ASN n 1 211 PRO n 1 212 VAL n 1 213 SER n 1 214 LEU n 1 215 HIS n 1 216 GLN n 1 217 LEU n 1 218 ALA n 1 219 HIS n 1 220 THR n 1 221 VAL n 1 222 ALA n 1 223 GLY n 1 224 ASN n 1 225 ILE n 1 226 THR n 1 227 LEU n 1 228 ASP n 1 229 SER n 1 230 GLY n 1 231 THR n 1 232 GLY n 1 233 LEU n 1 234 SER n 1 235 ASP n 1 236 LEU n 1 237 ALA n 1 238 ALA n 1 239 LEU n 1 240 GLY n 1 241 ARG n 1 242 SER n 1 243 ALA n 1 244 SER n 1 245 LYS n 1 246 ALA n 1 247 ARG n 1 248 ARG n 1 249 ALA n 1 250 GLY n 1 251 ALA n 1 252 THR n 1 253 THR n 1 254 ILE n 1 255 ILE n 1 256 ASP n 1 257 LEU n 1 258 PRO n 1 259 THR n 1 260 GLY n 1 261 PRO n 1 262 ARG n 1 263 ASP n 1 264 GLU n 1 265 SER n 1 266 ILE n 1 267 ILE n 1 268 VAL n 1 269 SER n 1 270 PRO n 1 271 ASN n 1 272 GLN n 1 273 GLU n 1 274 SER n 1 275 ARG n 1 276 ASP n 1 277 LEU n 1 278 LEU n 1 279 ALA n 1 280 ARG n 1 281 TYR n 1 282 GLY n 1 283 TYR n 1 284 SER n 1 285 PRO n 1 286 LYS n 1 287 THR n 1 288 CYS n 1 289 ARG n 1 290 PRO n 1 291 ALA n 1 292 GLY n 1 293 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 293 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene AXE84_08820 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Actinomyces oris' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 544580 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pSUMO _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A0X8K2V1_9ACTO _struct_ref.pdbx_db_accession A0A0X8K2V1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AHRPARVDIAMPTTSSPTAGETWLILGTDSRATVPGDQNRYGTTQEVEGSRADVIALVRPSQEGVTIINLPRDLTINSKG MELDRLATTYVPGPQNTVNALCTGLGIPTTHLVTIDMAQFATIIDSLGGIEVDVPEPVRDAYTGLNLSSAGRHRLSGIDA LALVRSRHPEILRDGRWVTMSQADGAQRRSQSTATVMQAVLSAIGQKASNPVSLHQLAHTVAGNITLDSGTGLSDLAALG RSASKARRAGATTIIDLPTGPRDESIIVSPNQESRDLLARYGYSPKTCRPAGA ; _struct_ref.pdbx_align_begin 71 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5V8C _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 293 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A0X8K2V1 _struct_ref_seq.db_align_beg 71 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 363 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 78 _struct_ref_seq.pdbx_auth_seq_align_end 370 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CO non-polymer . 'COBALT (II) ION' ? 'Co 2' 58.933 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PE4 non-polymer . '2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL' 'POLYETHYLENE GLYCOL PEG4000' 'C16 H34 O8' 354.436 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5V8C _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.87 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 34.16 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1M sodium citrate pH 5.5, 25% PEG4000, 20% 2-propanol, 5 mM DTT, 200 mM NaCl, 5 mM MgCl2' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-11-06 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9790 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9790 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 89.270 _reflns.entry_id 5V8C _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.510 _reflns.d_resolution_low 52.830 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8332 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.000 _reflns.percent_possible_obs 98.900 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.354 _reflns.pdbx_Rmerge_I_obs 0.051 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.370 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.997 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.056 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.510 2.570 ? 1.580 ? ? ? ? 572 93.500 ? ? ? ? 1.014 ? ? ? ? ? ? ? ? 6.309 ? ? ? ? 1.105 ? ? 1 1 0.756 ? 2.570 2.640 ? 2.060 ? ? ? ? 574 100.000 ? ? ? ? 0.857 ? ? ? ? ? ? ? ? 6.678 ? ? ? ? 0.929 ? ? 2 1 0.882 ? 2.640 2.720 ? 2.480 ? ? ? ? 587 99.800 ? ? ? ? 0.688 ? ? ? ? ? ? ? ? 6.365 ? ? ? ? 0.749 ? ? 3 1 0.909 ? 2.720 2.800 ? 3.400 ? ? ? ? 550 99.100 ? ? ? ? 0.536 ? ? ? ? ? ? ? ? 6.302 ? ? ? ? 0.585 ? ? 4 1 0.947 ? 2.800 2.890 ? 4.470 ? ? ? ? 542 99.400 ? ? ? ? 0.402 ? ? ? ? ? ? ? ? 6.369 ? ? ? ? 0.437 ? ? 5 1 0.952 ? 2.890 2.990 ? 6.680 ? ? ? ? 525 99.600 ? ? ? ? 0.267 ? ? ? ? ? ? ? ? 6.813 ? ? ? ? 0.289 ? ? 6 1 0.983 ? 2.990 3.110 ? 9.620 ? ? ? ? 513 100.000 ? ? ? ? 0.178 ? ? ? ? ? ? ? ? 6.635 ? ? ? ? 0.193 ? ? 7 1 0.992 ? 3.110 3.230 ? 12.060 ? ? ? ? 486 100.000 ? ? ? ? 0.124 ? ? ? ? ? ? ? ? 6.502 ? ? ? ? 0.135 ? ? 8 1 0.996 ? 3.230 3.380 ? 15.910 ? ? ? ? 490 99.800 ? ? ? ? 0.095 ? ? ? ? ? ? ? ? 6.284 ? ? ? ? 0.103 ? ? 9 1 0.998 ? 3.380 3.540 ? 18.510 ? ? ? ? 438 97.600 ? ? ? ? 0.081 ? ? ? ? ? ? ? ? 6.057 ? ? ? ? 0.088 ? ? 10 1 0.995 ? 3.540 3.730 ? 23.440 ? ? ? ? 436 99.800 ? ? ? ? 0.061 ? ? ? ? ? ? ? ? 6.505 ? ? ? ? 0.066 ? ? 11 1 0.997 ? 3.730 3.960 ? 27.200 ? ? ? ? 413 100.000 ? ? ? ? 0.055 ? ? ? ? ? ? ? ? 6.525 ? ? ? ? 0.060 ? ? 12 1 0.998 ? 3.960 4.230 ? 29.290 ? ? ? ? 393 100.000 ? ? ? ? 0.047 ? ? ? ? ? ? ? ? 6.293 ? ? ? ? 0.052 ? ? 13 1 0.998 ? 4.230 4.570 ? 33.300 ? ? ? ? 357 97.300 ? ? ? ? 0.043 ? ? ? ? ? ? ? ? 5.958 ? ? ? ? 0.048 ? ? 14 1 0.998 ? 4.570 5.010 ? 36.440 ? ? ? ? 335 100.000 ? ? ? ? 0.039 ? ? ? ? ? ? ? ? 6.561 ? ? ? ? 0.042 ? ? 15 1 0.999 ? 5.010 5.600 ? 35.690 ? ? ? ? 308 100.000 ? ? ? ? 0.040 ? ? ? ? ? ? ? ? 6.318 ? ? ? ? 0.044 ? ? 16 1 0.998 ? 5.600 6.470 ? 35.750 ? ? ? ? 275 100.000 ? ? ? ? 0.040 ? ? ? ? ? ? ? ? 5.924 ? ? ? ? 0.044 ? ? 17 1 0.998 ? 6.470 7.920 ? 37.760 ? ? ? ? 234 96.700 ? ? ? ? 0.037 ? ? ? ? ? ? ? ? 5.833 ? ? ? ? 0.041 ? ? 18 1 0.998 ? 7.920 11.200 ? 39.070 ? ? ? ? 192 99.000 ? ? ? ? 0.042 ? ? ? ? ? ? ? ? 5.865 ? ? ? ? 0.046 ? ? 19 1 0.998 ? 11.200 52.830 ? 37.040 ? ? ? ? 112 94.100 ? ? ? ? 0.045 ? ? ? ? ? ? ? ? 5.152 ? ? ? ? 0.050 ? ? 20 1 0.997 ? # _refine.aniso_B[1][1] -18.8450 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] -0.0490 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 18.8940 _refine.B_iso_max 188.510 _refine.B_iso_mean 98.0100 _refine.B_iso_min 63.880 _refine.correlation_coeff_Fo_to_Fc 0.9500 _refine.correlation_coeff_Fo_to_Fc_free 0.9230 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5V8C _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.5100 _refine.ls_d_res_low 52.8300 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8302 _refine.ls_number_reflns_R_free 416 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.1000 _refine.ls_percent_reflns_R_free 5.0100 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2230 _refine.ls_R_factor_R_free 0.2720 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2210 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.3350 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.3330 _refine.pdbx_overall_SU_R_Blow_DPI 2.4180 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 1.3810 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 5V8C _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.370 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.5100 _refine_hist.d_res_low 52.8300 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 6 _refine_hist.number_atoms_total 1990 _refine_hist.pdbx_number_residues_total 272 _refine_hist.pdbx_B_iso_mean_ligand 119.89 _refine_hist.pdbx_B_iso_mean_solvent 79.28 _refine_hist.pdbx_number_atoms_protein 1954 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? ? ? 683 ? t_dihedral_angle_d 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? 39 ? t_trig_c_planes 2.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 302 ? t_gen_planes 5.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 2017 ? t_it 20.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 0 ? t_nbd 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_improper_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_pseud_angle ? ? 'X-RAY DIFFRACTION' ? ? ? 295 ? t_chiral_improper_torsion 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_sum_occupancies ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_distance ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_angle ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 2278 ? t_ideal_dist_contact 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? 0.007 ? 2017 ? t_bond_d 3.000 HARMONIC 'X-RAY DIFFRACTION' ? 0.930 ? 2751 ? t_angle_deg 3.000 HARMONIC 'X-RAY DIFFRACTION' ? 2.860 ? ? ? t_omega_torsion ? ? 'X-RAY DIFFRACTION' ? 21.230 ? ? ? t_other_torsion ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.5100 _refine_ls_shell.d_res_low 2.8100 _refine_ls_shell.number_reflns_all 2286 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 115 _refine_ls_shell.number_reflns_R_work 2171 _refine_ls_shell.percent_reflns_obs 98.5800 _refine_ls_shell.percent_reflns_R_free 5.0300 _refine_ls_shell.R_factor_all 0.2554 _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3066 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2528 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 5 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5V8C _struct.title 'LytR-Csp2A-Psr enzyme from Actinomyces oris' _struct.pdbx_descriptor 'Transcriptional regulator' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5V8C _struct_keywords.text 'LCP, LytR-Cps2A-Psr, protein glycosylation, Gram positive surface glycosylation, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 87 ? VAL A 91 ? ALA A 164 VAL A 168 5 ? 5 HELX_P HELX_P2 AA2 GLY A 93 ? GLY A 106 ? GLY A 170 GLY A 183 1 ? 14 HELX_P HELX_P3 AA3 ASP A 116 ? LEU A 127 ? ASP A 193 LEU A 204 1 ? 12 HELX_P HELX_P4 AA4 SER A 156 ? SER A 166 ? SER A 233 SER A 243 1 ? 11 HELX_P HELX_P5 AA5 SER A 181 ? SER A 209 ? SER A 258 SER A 286 1 ? 29 HELX_P HELX_P6 AA6 ASN A 210 ? ASN A 224 ? ASN A 287 ASN A 301 1 ? 15 HELX_P HELX_P7 AA7 GLY A 232 ? ALA A 249 ? GLY A 309 ALA A 326 1 ? 18 HELX_P HELX_P8 AA8 PRO A 261 ? SER A 265 ? PRO A 338 SER A 342 5 ? 5 HELX_P HELX_P9 AA9 ASN A 271 ? TYR A 281 ? ASN A 348 TYR A 358 1 ? 11 HELX_P HELX_P10 AB1 SER A 284 ? LYS A 286 ? SER A 361 LYS A 363 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 102 SG ? ? ? 1_555 A CYS 288 SG ? ? A CYS 179 A CYS 365 1_555 ? ? ? ? ? ? ? 2.038 ? metalc1 metalc ? ? A ALA 1 N ? ? ? 1_555 B CO . CO ? ? A ALA 78 A CO 401 1_555 ? ? ? ? ? ? ? 2.199 ? metalc2 metalc ? ? A HIS 2 N ? ? ? 1_555 B CO . CO ? ? A HIS 79 A CO 401 1_555 ? ? ? ? ? ? ? 2.064 ? metalc3 metalc ? ? A HIS 2 ND1 ? ? ? 1_555 B CO . CO ? ? A HIS 79 A CO 401 1_555 ? ? ? ? ? ? ? 2.681 ? metalc4 metalc ? ? A HIS 219 NE2 ? ? ? 1_555 B CO . CO ? ? A HIS 296 A CO 401 1_555 ? ? ? ? ? ? ? 2.374 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 2 ? AA5 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 5 ? VAL A 7 ? ALA A 82 VAL A 84 AA1 2 THR A 226 ? ASP A 228 ? THR A 303 ASP A 305 AA1 3 HIS A 111 ? ILE A 115 ? HIS A 188 ILE A 192 AA1 4 TRP A 23 ? ASP A 29 ? TRP A 100 ASP A 106 AA1 5 ARG A 51 ? PRO A 60 ? ARG A 128 PRO A 137 AA1 6 VAL A 65 ? LEU A 70 ? VAL A 142 LEU A 147 AA1 7 THR A 252 ? ASP A 256 ? THR A 329 ASP A 333 AA2 1 THR A 13 ? THR A 14 ? THR A 90 THR A 91 AA2 2 CYS A 288 ? ARG A 289 ? CYS A 365 ARG A 366 AA3 1 THR A 75 ? ASN A 77 ? THR A 152 ASN A 154 AA3 2 LEU A 83 ? ARG A 85 ? LEU A 160 ARG A 162 AA4 1 ASP A 133 ? VAL A 134 ? ASP A 210 VAL A 211 AA4 2 GLY A 151 ? ARG A 152 ? GLY A 228 ARG A 229 AA5 1 LEU A 145 ? LEU A 147 ? LEU A 222 LEU A 224 AA5 2 VAL A 138 ? ASP A 140 ? VAL A 215 ASP A 217 AA5 3 GLU A 170 ? ARG A 173 ? GLU A 247 ARG A 250 AA5 4 ARG A 176 ? VAL A 178 ? ARG A 253 VAL A 255 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ALA A 5 ? N ALA A 82 O LEU A 227 ? O LEU A 304 AA1 2 3 O THR A 226 ? O THR A 303 N THR A 114 ? N THR A 191 AA1 3 4 O ILE A 115 ? O ILE A 192 N THR A 28 ? N THR A 105 AA1 4 5 N ILE A 25 ? N ILE A 102 O ALA A 56 ? O ALA A 133 AA1 5 6 N ARG A 59 ? N ARG A 136 O THR A 66 ? O THR A 143 AA1 6 7 N ILE A 67 ? N ILE A 144 O ILE A 255 ? O ILE A 332 AA2 1 2 N THR A 13 ? N THR A 90 O ARG A 289 ? O ARG A 366 AA3 1 2 N ILE A 76 ? N ILE A 153 O ASP A 84 ? O ASP A 161 AA4 1 2 N VAL A 134 ? N VAL A 211 O GLY A 151 ? O GLY A 228 AA5 1 2 O LEU A 147 ? O LEU A 224 N VAL A 138 ? N VAL A 215 AA5 2 3 N ARG A 139 ? N ARG A 216 O GLU A 170 ? O GLU A 247 AA5 3 4 N ILE A 171 ? N ILE A 248 O VAL A 178 ? O VAL A 255 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CO 401 ? 4 'binding site for residue CO A 401' AC2 Software A PO4 402 ? 4 'binding site for residue PO4 A 402' AC3 Software A PE4 403 ? 6 'binding site for residue PE4 A 403' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ALA A 1 ? ALA A 78 . ? 1_555 ? 2 AC1 4 HIS A 2 ? HIS A 79 . ? 1_555 ? 3 AC1 4 GLU A 63 ? GLU A 140 . ? 1_455 ? 4 AC1 4 HIS A 219 ? HIS A 296 . ? 1_555 ? 5 AC2 4 ARG A 51 ? ARG A 128 . ? 1_555 ? 6 AC2 4 ARG A 72 ? ARG A 149 . ? 1_555 ? 7 AC2 4 ARG A 85 ? ARG A 162 . ? 1_555 ? 8 AC2 4 ARG A 241 ? ARG A 318 . ? 2_554 ? 9 AC3 6 ILE A 115 ? ILE A 192 . ? 1_555 ? 10 AC3 6 MET A 197 ? MET A 274 . ? 1_555 ? 11 AC3 6 VAL A 200 ? VAL A 277 . ? 1_555 ? 12 AC3 6 LEU A 201 ? LEU A 278 . ? 1_555 ? 13 AC3 6 LEU A 236 ? LEU A 313 . ? 1_555 ? 14 AC3 6 SER A 244 ? SER A 321 . ? 1_555 ? # _atom_sites.entry_id 5V8C _atom_sites.fract_transf_matrix[1][1] 0.024480 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014478 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012194 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CO N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 78 78 ALA ALA A . n A 1 2 HIS 2 79 79 HIS HIS A . n A 1 3 ARG 3 80 80 ARG ARG A . n A 1 4 PRO 4 81 81 PRO PRO A . n A 1 5 ALA 5 82 82 ALA ALA A . n A 1 6 ARG 6 83 83 ARG ARG A . n A 1 7 VAL 7 84 84 VAL VAL A . n A 1 8 ASP 8 85 85 ASP ASP A . n A 1 9 ILE 9 86 86 ILE ILE A . n A 1 10 ALA 10 87 87 ALA ALA A . n A 1 11 MET 11 88 88 MET MET A . n A 1 12 PRO 12 89 89 PRO PRO A . n A 1 13 THR 13 90 90 THR THR A . n A 1 14 THR 14 91 91 THR THR A . n A 1 15 SER 15 92 92 SER SER A . n A 1 16 SER 16 93 93 SER SER A . n A 1 17 PRO 17 94 94 PRO PRO A . n A 1 18 THR 18 95 95 THR THR A . n A 1 19 ALA 19 96 96 ALA ALA A . n A 1 20 GLY 20 97 97 GLY GLY A . n A 1 21 GLU 21 98 98 GLU GLU A . n A 1 22 THR 22 99 99 THR THR A . n A 1 23 TRP 23 100 100 TRP TRP A . n A 1 24 LEU 24 101 101 LEU LEU A . n A 1 25 ILE 25 102 102 ILE ILE A . n A 1 26 LEU 26 103 103 LEU LEU A . n A 1 27 GLY 27 104 104 GLY GLY A . n A 1 28 THR 28 105 105 THR THR A . n A 1 29 ASP 29 106 106 ASP ASP A . n A 1 30 SER 30 107 ? ? ? A . n A 1 31 ARG 31 108 ? ? ? A . n A 1 32 ALA 32 109 ? ? ? A . n A 1 33 THR 33 110 ? ? ? A . n A 1 34 VAL 34 111 ? ? ? A . n A 1 35 PRO 35 112 ? ? ? A . n A 1 36 GLY 36 113 ? ? ? A . n A 1 37 ASP 37 114 ? ? ? A . n A 1 38 GLN 38 115 ? ? ? A . n A 1 39 ASN 39 116 ? ? ? A . n A 1 40 ARG 40 117 ? ? ? A . n A 1 41 TYR 41 118 ? ? ? A . n A 1 42 GLY 42 119 ? ? ? A . n A 1 43 THR 43 120 ? ? ? A . n A 1 44 THR 44 121 ? ? ? A . n A 1 45 GLN 45 122 ? ? ? A . n A 1 46 GLU 46 123 ? ? ? A . n A 1 47 VAL 47 124 ? ? ? A . n A 1 48 GLU 48 125 ? ? ? A . n A 1 49 GLY 49 126 126 GLY GLY A . n A 1 50 SER 50 127 127 SER SER A . n A 1 51 ARG 51 128 128 ARG ARG A . n A 1 52 ALA 52 129 129 ALA ALA A . n A 1 53 ASP 53 130 130 ASP ASP A . n A 1 54 VAL 54 131 131 VAL VAL A . n A 1 55 ILE 55 132 132 ILE ILE A . n A 1 56 ALA 56 133 133 ALA ALA A . n A 1 57 LEU 57 134 134 LEU LEU A . n A 1 58 VAL 58 135 135 VAL VAL A . n A 1 59 ARG 59 136 136 ARG ARG A . n A 1 60 PRO 60 137 137 PRO PRO A . n A 1 61 SER 61 138 138 SER SER A . n A 1 62 GLN 62 139 139 GLN GLN A . n A 1 63 GLU 63 140 140 GLU GLU A . n A 1 64 GLY 64 141 141 GLY GLY A . n A 1 65 VAL 65 142 142 VAL VAL A . n A 1 66 THR 66 143 143 THR THR A . n A 1 67 ILE 67 144 144 ILE ILE A . n A 1 68 ILE 68 145 145 ILE ILE A . n A 1 69 ASN 69 146 146 ASN ASN A . n A 1 70 LEU 70 147 147 LEU LEU A . n A 1 71 PRO 71 148 148 PRO PRO A . n A 1 72 ARG 72 149 149 ARG ARG A . n A 1 73 ASP 73 150 150 ASP ASP A . n A 1 74 LEU 74 151 151 LEU LEU A . n A 1 75 THR 75 152 152 THR THR A . n A 1 76 ILE 76 153 153 ILE ILE A . n A 1 77 ASN 77 154 154 ASN ASN A . n A 1 78 SER 78 155 155 SER SER A . n A 1 79 LYS 79 156 156 LYS LYS A . n A 1 80 GLY 80 157 157 GLY GLY A . n A 1 81 MET 81 158 158 MET MET A . n A 1 82 GLU 82 159 159 GLU GLU A . n A 1 83 LEU 83 160 160 LEU LEU A . n A 1 84 ASP 84 161 161 ASP ASP A . n A 1 85 ARG 85 162 162 ARG ARG A . n A 1 86 LEU 86 163 163 LEU LEU A . n A 1 87 ALA 87 164 164 ALA ALA A . n A 1 88 THR 88 165 165 THR THR A . n A 1 89 THR 89 166 166 THR THR A . n A 1 90 TYR 90 167 167 TYR TYR A . n A 1 91 VAL 91 168 168 VAL VAL A . n A 1 92 PRO 92 169 169 PRO PRO A . n A 1 93 GLY 93 170 170 GLY GLY A . n A 1 94 PRO 94 171 171 PRO PRO A . n A 1 95 GLN 95 172 172 GLN GLN A . n A 1 96 ASN 96 173 173 ASN ASN A . n A 1 97 THR 97 174 174 THR THR A . n A 1 98 VAL 98 175 175 VAL VAL A . n A 1 99 ASN 99 176 176 ASN ASN A . n A 1 100 ALA 100 177 177 ALA ALA A . n A 1 101 LEU 101 178 178 LEU LEU A . n A 1 102 CYS 102 179 179 CYS CYS A . n A 1 103 THR 103 180 180 THR THR A . n A 1 104 GLY 104 181 181 GLY GLY A . n A 1 105 LEU 105 182 182 LEU LEU A . n A 1 106 GLY 106 183 183 GLY GLY A . n A 1 107 ILE 107 184 184 ILE ILE A . n A 1 108 PRO 108 185 185 PRO PRO A . n A 1 109 THR 109 186 186 THR THR A . n A 1 110 THR 110 187 187 THR THR A . n A 1 111 HIS 111 188 188 HIS HIS A . n A 1 112 LEU 112 189 189 LEU LEU A . n A 1 113 VAL 113 190 190 VAL VAL A . n A 1 114 THR 114 191 191 THR THR A . n A 1 115 ILE 115 192 192 ILE ILE A . n A 1 116 ASP 116 193 193 ASP ASP A . n A 1 117 MET 117 194 194 MET MET A . n A 1 118 ALA 118 195 195 ALA ALA A . n A 1 119 GLN 119 196 196 GLN GLN A . n A 1 120 PHE 120 197 197 PHE PHE A . n A 1 121 ALA 121 198 198 ALA ALA A . n A 1 122 THR 122 199 199 THR THR A . n A 1 123 ILE 123 200 200 ILE ILE A . n A 1 124 ILE 124 201 201 ILE ILE A . n A 1 125 ASP 125 202 202 ASP ASP A . n A 1 126 SER 126 203 203 SER SER A . n A 1 127 LEU 127 204 204 LEU LEU A . n A 1 128 GLY 128 205 205 GLY GLY A . n A 1 129 GLY 129 206 206 GLY GLY A . n A 1 130 ILE 130 207 207 ILE ILE A . n A 1 131 GLU 131 208 208 GLU GLU A . n A 1 132 VAL 132 209 209 VAL VAL A . n A 1 133 ASP 133 210 210 ASP ASP A . n A 1 134 VAL 134 211 211 VAL ALA A . n A 1 135 PRO 135 212 212 PRO PRO A . n A 1 136 GLU 136 213 213 GLU GLU A . n A 1 137 PRO 137 214 214 PRO PRO A . n A 1 138 VAL 138 215 215 VAL VAL A . n A 1 139 ARG 139 216 216 ARG ARG A . n A 1 140 ASP 140 217 217 ASP ASP A . n A 1 141 ALA 141 218 218 ALA ALA A . n A 1 142 TYR 142 219 219 TYR TYR A . n A 1 143 THR 143 220 220 THR THR A . n A 1 144 GLY 144 221 221 GLY GLY A . n A 1 145 LEU 145 222 222 LEU LEU A . n A 1 146 ASN 146 223 223 ASN ASN A . n A 1 147 LEU 147 224 224 LEU LEU A . n A 1 148 SER 148 225 225 SER SER A . n A 1 149 SER 149 226 226 SER SER A . n A 1 150 ALA 150 227 227 ALA ALA A . n A 1 151 GLY 151 228 228 GLY GLY A . n A 1 152 ARG 152 229 229 ARG ARG A . n A 1 153 HIS 153 230 230 HIS HIS A . n A 1 154 ARG 154 231 231 ARG ARG A . n A 1 155 LEU 155 232 232 LEU LEU A . n A 1 156 SER 156 233 233 SER SER A . n A 1 157 GLY 157 234 234 GLY GLY A . n A 1 158 ILE 158 235 235 ILE ILE A . n A 1 159 ASP 159 236 236 ASP ASP A . n A 1 160 ALA 160 237 237 ALA ALA A . n A 1 161 LEU 161 238 238 LEU LEU A . n A 1 162 ALA 162 239 239 ALA ALA A . n A 1 163 LEU 163 240 240 LEU LEU A . n A 1 164 VAL 164 241 241 VAL VAL A . n A 1 165 ARG 165 242 242 ARG ARG A . n A 1 166 SER 166 243 243 SER SER A . n A 1 167 ARG 167 244 244 ARG ARG A . n A 1 168 HIS 168 245 245 HIS HIS A . n A 1 169 PRO 169 246 246 PRO PRO A . n A 1 170 GLU 170 247 247 GLU GLU A . n A 1 171 ILE 171 248 248 ILE ILE A . n A 1 172 LEU 172 249 249 LEU LEU A . n A 1 173 ARG 173 250 250 ARG ARG A . n A 1 174 ASP 174 251 251 ASP ASP A . n A 1 175 GLY 175 252 252 GLY GLY A . n A 1 176 ARG 176 253 253 ARG ARG A . n A 1 177 TRP 177 254 254 TRP TRP A . n A 1 178 VAL 178 255 255 VAL VAL A . n A 1 179 THR 179 256 256 THR THR A . n A 1 180 MET 180 257 257 MET MET A . n A 1 181 SER 181 258 258 SER SER A . n A 1 182 GLN 182 259 259 GLN GLN A . n A 1 183 ALA 183 260 260 ALA ALA A . n A 1 184 ASP 184 261 261 ASP ASP A . n A 1 185 GLY 185 262 262 GLY GLY A . n A 1 186 ALA 186 263 263 ALA ALA A . n A 1 187 GLN 187 264 264 GLN GLN A . n A 1 188 ARG 188 265 265 ARG ARG A . n A 1 189 ARG 189 266 266 ARG ARG A . n A 1 190 SER 190 267 267 SER SER A . n A 1 191 GLN 191 268 268 GLN GLN A . n A 1 192 SER 192 269 269 SER SER A . n A 1 193 THR 193 270 270 THR THR A . n A 1 194 ALA 194 271 271 ALA ALA A . n A 1 195 THR 195 272 272 THR THR A . n A 1 196 VAL 196 273 273 VAL VAL A . n A 1 197 MET 197 274 274 MET MET A . n A 1 198 GLN 198 275 275 GLN GLN A . n A 1 199 ALA 199 276 276 ALA ALA A . n A 1 200 VAL 200 277 277 VAL VAL A . n A 1 201 LEU 201 278 278 LEU LEU A . n A 1 202 SER 202 279 279 SER SER A . n A 1 203 ALA 203 280 280 ALA ALA A . n A 1 204 ILE 204 281 281 ILE ILE A . n A 1 205 GLY 205 282 282 GLY GLY A . n A 1 206 GLN 206 283 283 GLN GLN A . n A 1 207 LYS 207 284 284 LYS LYS A . n A 1 208 ALA 208 285 285 ALA ALA A . n A 1 209 SER 209 286 286 SER SER A . n A 1 210 ASN 210 287 287 ASN ASN A . n A 1 211 PRO 211 288 288 PRO PRO A . n A 1 212 VAL 212 289 289 VAL VAL A . n A 1 213 SER 213 290 290 SER SER A . n A 1 214 LEU 214 291 291 LEU LEU A . n A 1 215 HIS 215 292 292 HIS HIS A . n A 1 216 GLN 216 293 293 GLN GLN A . n A 1 217 LEU 217 294 294 LEU LEU A . n A 1 218 ALA 218 295 295 ALA ALA A . n A 1 219 HIS 219 296 296 HIS HIS A . n A 1 220 THR 220 297 297 THR THR A . n A 1 221 VAL 221 298 298 VAL VAL A . n A 1 222 ALA 222 299 299 ALA ALA A . n A 1 223 GLY 223 300 300 GLY GLY A . n A 1 224 ASN 224 301 301 ASN ASN A . n A 1 225 ILE 225 302 302 ILE ILE A . n A 1 226 THR 226 303 303 THR THR A . n A 1 227 LEU 227 304 304 LEU LEU A . n A 1 228 ASP 228 305 305 ASP ASP A . n A 1 229 SER 229 306 306 SER SER A . n A 1 230 GLY 230 307 307 GLY GLY A . n A 1 231 THR 231 308 308 THR THR A . n A 1 232 GLY 232 309 309 GLY GLY A . n A 1 233 LEU 233 310 310 LEU LEU A . n A 1 234 SER 234 311 311 SER SER A . n A 1 235 ASP 235 312 312 ASP ASP A . n A 1 236 LEU 236 313 313 LEU LEU A . n A 1 237 ALA 237 314 314 ALA ALA A . n A 1 238 ALA 238 315 315 ALA ALA A . n A 1 239 LEU 239 316 316 LEU LEU A . n A 1 240 GLY 240 317 317 GLY GLY A . n A 1 241 ARG 241 318 318 ARG ARG A . n A 1 242 SER 242 319 319 SER SER A . n A 1 243 ALA 243 320 320 ALA ALA A . n A 1 244 SER 244 321 321 SER SER A . n A 1 245 LYS 245 322 322 LYS LYS A . n A 1 246 ALA 246 323 323 ALA ALA A . n A 1 247 ARG 247 324 324 ARG ARG A . n A 1 248 ARG 248 325 325 ARG ARG A . n A 1 249 ALA 249 326 326 ALA ALA A . n A 1 250 GLY 250 327 327 GLY GLY A . n A 1 251 ALA 251 328 328 ALA ALA A . n A 1 252 THR 252 329 329 THR THR A . n A 1 253 THR 253 330 330 THR THR A . n A 1 254 ILE 254 331 331 ILE ILE A . n A 1 255 ILE 255 332 332 ILE ILE A . n A 1 256 ASP 256 333 333 ASP ASP A . n A 1 257 LEU 257 334 334 LEU LEU A . n A 1 258 PRO 258 335 335 PRO PRO A . n A 1 259 THR 259 336 336 THR THR A . n A 1 260 GLY 260 337 337 GLY GLY A . n A 1 261 PRO 261 338 338 PRO PRO A . n A 1 262 ARG 262 339 339 ARG ARG A . n A 1 263 ASP 263 340 340 ASP ASP A . n A 1 264 GLU 264 341 341 GLU GLU A . n A 1 265 SER 265 342 342 SER SER A . n A 1 266 ILE 266 343 343 ILE ILE A . n A 1 267 ILE 267 344 344 ILE ILE A . n A 1 268 VAL 268 345 345 VAL VAL A . n A 1 269 SER 269 346 346 SER SER A . n A 1 270 PRO 270 347 347 PRO PRO A . n A 1 271 ASN 271 348 348 ASN ASN A . n A 1 272 GLN 272 349 349 GLN GLN A . n A 1 273 GLU 273 350 350 GLU GLU A . n A 1 274 SER 274 351 351 SER SER A . n A 1 275 ARG 275 352 352 ARG ARG A . n A 1 276 ASP 276 353 353 ASP ASP A . n A 1 277 LEU 277 354 354 LEU LEU A . n A 1 278 LEU 278 355 355 LEU LEU A . n A 1 279 ALA 279 356 356 ALA ALA A . n A 1 280 ARG 280 357 357 ARG ARG A . n A 1 281 TYR 281 358 358 TYR TYR A . n A 1 282 GLY 282 359 359 GLY GLY A . n A 1 283 TYR 283 360 360 TYR TYR A . n A 1 284 SER 284 361 361 SER SER A . n A 1 285 PRO 285 362 362 PRO PRO A . n A 1 286 LYS 286 363 363 LYS LYS A . n A 1 287 THR 287 364 364 THR THR A . n A 1 288 CYS 288 365 365 CYS CYS A . n A 1 289 ARG 289 366 366 ARG ARG A . n A 1 290 PRO 290 367 367 PRO PRO A . n A 1 291 ALA 291 368 368 ALA ALA A . n A 1 292 GLY 292 369 ? ? ? A . n A 1 293 ALA 293 370 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO 1 401 1 CO CO A . C 3 PO4 1 402 1 PO4 PO4 A . D 4 PE4 1 403 1 PE4 PE4 A . E 5 HOH 1 501 4 HOH HOH A . E 5 HOH 2 502 3 HOH HOH A . E 5 HOH 3 503 5 HOH HOH A . E 5 HOH 4 504 2 HOH HOH A . E 5 HOH 5 505 1 HOH HOH A . E 5 HOH 6 506 6 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N ? A ALA 1 ? A ALA 78 ? 1_555 CO ? B CO . ? A CO 401 ? 1_555 N ? A HIS 2 ? A HIS 79 ? 1_555 84.5 ? 2 N ? A ALA 1 ? A ALA 78 ? 1_555 CO ? B CO . ? A CO 401 ? 1_555 ND1 ? A HIS 2 ? A HIS 79 ? 1_555 149.3 ? 3 N ? A HIS 2 ? A HIS 79 ? 1_555 CO ? B CO . ? A CO 401 ? 1_555 ND1 ? A HIS 2 ? A HIS 79 ? 1_555 94.7 ? 4 N ? A ALA 1 ? A ALA 78 ? 1_555 CO ? B CO . ? A CO 401 ? 1_555 NE2 ? A HIS 219 ? A HIS 296 ? 1_555 78.4 ? 5 N ? A HIS 2 ? A HIS 79 ? 1_555 CO ? B CO . ? A CO 401 ? 1_555 NE2 ? A HIS 219 ? A HIS 296 ? 1_555 86.6 ? 6 ND1 ? A HIS 2 ? A HIS 79 ? 1_555 CO ? B CO . ? A CO 401 ? 1_555 NE2 ? A HIS 219 ? A HIS 296 ? 1_555 70.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-04-11 2 'Structure model' 1 1 2018-04-18 3 'Structure model' 1 2 2019-04-24 4 'Structure model' 1 3 2019-11-20 5 'Structure model' 1 4 2020-01-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Author supporting evidence' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' diffrn_detector 2 3 'Structure model' citation 3 3 'Structure model' citation_author 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 5 'Structure model' pdbx_audit_support # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_diffrn_detector.detector' 2 3 'Structure model' '_citation.country' 3 3 'Structure model' '_citation.journal_abbrev' 4 3 'Structure model' '_citation.journal_id_CSD' 5 3 'Structure model' '_citation.journal_id_ISSN' 6 3 'Structure model' '_citation.journal_volume' 7 3 'Structure model' '_citation.pdbx_database_id_DOI' 8 3 'Structure model' '_citation.pdbx_database_id_PubMed' 9 3 'Structure model' '_citation.title' 10 3 'Structure model' '_citation.year' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 10.6784 _pdbx_refine_tls.origin_y 4.3011 _pdbx_refine_tls.origin_z 7.7936 _pdbx_refine_tls.T[1][1] -0.0869 _pdbx_refine_tls.T[2][2] -0.0449 _pdbx_refine_tls.T[3][3] -0.1204 _pdbx_refine_tls.T[1][2] 0.0095 _pdbx_refine_tls.T[1][3] 0.0089 _pdbx_refine_tls.T[2][3] -0.0058 _pdbx_refine_tls.L[1][1] 1.2799 _pdbx_refine_tls.L[2][2] 1.3080 _pdbx_refine_tls.L[3][3] 4.0510 _pdbx_refine_tls.L[1][2] -0.2170 _pdbx_refine_tls.L[1][3] -0.0600 _pdbx_refine_tls.L[2][3] -0.9087 _pdbx_refine_tls.S[1][1] -0.1260 _pdbx_refine_tls.S[2][2] 0.0696 _pdbx_refine_tls.S[3][3] 0.0564 _pdbx_refine_tls.S[1][2] 0.1342 _pdbx_refine_tls.S[1][3] 0.0381 _pdbx_refine_tls.S[2][3] 0.0016 _pdbx_refine_tls.S[2][1] 0.1384 _pdbx_refine_tls.S[3][1] 0.6926 _pdbx_refine_tls.S[3][2] 0.2548 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 78 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 368 _pdbx_refine_tls_group.selection_details '{ A|78 - A|368 }' _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.10.3 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 79 ? ? -26.92 116.58 2 1 ARG A 231 ? ? 50.46 78.33 3 1 SER A 243 ? ? -41.25 92.24 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 106 ? CG ? A ASP 29 CG 2 1 Y 1 A ASP 106 ? OD1 ? A ASP 29 OD1 3 1 Y 1 A ASP 106 ? OD2 ? A ASP 29 OD2 4 1 Y 1 A LYS 156 ? CG ? A LYS 79 CG 5 1 Y 1 A LYS 156 ? CD ? A LYS 79 CD 6 1 Y 1 A LYS 156 ? CE ? A LYS 79 CE 7 1 Y 1 A LYS 156 ? NZ ? A LYS 79 NZ 8 1 Y 1 A GLU 159 ? CG ? A GLU 82 CG 9 1 Y 1 A GLU 159 ? CD ? A GLU 82 CD 10 1 Y 1 A GLU 159 ? OE1 ? A GLU 82 OE1 11 1 Y 1 A GLU 159 ? OE2 ? A GLU 82 OE2 12 1 Y 1 A GLU 208 ? CG ? A GLU 131 CG 13 1 Y 1 A GLU 208 ? CD ? A GLU 131 CD 14 1 Y 1 A GLU 208 ? OE1 ? A GLU 131 OE1 15 1 Y 1 A GLU 208 ? OE2 ? A GLU 131 OE2 16 1 Y 1 A VAL 211 ? CG1 ? A VAL 134 CG1 17 1 Y 1 A VAL 211 ? CG2 ? A VAL 134 CG2 18 1 Y 1 A TYR 219 ? CG ? A TYR 142 CG 19 1 Y 1 A TYR 219 ? CD1 ? A TYR 142 CD1 20 1 Y 1 A TYR 219 ? CD2 ? A TYR 142 CD2 21 1 Y 1 A TYR 219 ? CE1 ? A TYR 142 CE1 22 1 Y 1 A TYR 219 ? CE2 ? A TYR 142 CE2 23 1 Y 1 A TYR 219 ? CZ ? A TYR 142 CZ 24 1 Y 1 A TYR 219 ? OH ? A TYR 142 OH 25 1 Y 1 A ARG 229 ? CG ? A ARG 152 CG 26 1 Y 1 A ARG 229 ? CD ? A ARG 152 CD 27 1 Y 1 A ARG 229 ? NE ? A ARG 152 NE 28 1 Y 1 A ARG 229 ? CZ ? A ARG 152 CZ 29 1 Y 1 A ARG 229 ? NH1 ? A ARG 152 NH1 30 1 Y 1 A ARG 229 ? NH2 ? A ARG 152 NH2 31 1 Y 1 A ARG 244 ? CG ? A ARG 167 CG 32 1 Y 1 A ARG 244 ? CD ? A ARG 167 CD 33 1 Y 1 A ARG 244 ? NE ? A ARG 167 NE 34 1 Y 1 A ARG 244 ? CZ ? A ARG 167 CZ 35 1 Y 1 A ARG 244 ? NH1 ? A ARG 167 NH1 36 1 Y 1 A ARG 244 ? NH2 ? A ARG 167 NH2 37 1 Y 1 A LYS 284 ? CG ? A LYS 207 CG 38 1 Y 1 A LYS 284 ? CD ? A LYS 207 CD 39 1 Y 1 A LYS 284 ? CE ? A LYS 207 CE 40 1 Y 1 A LYS 284 ? NZ ? A LYS 207 NZ 41 1 Y 1 A ARG 325 ? CG ? A ARG 248 CG 42 1 Y 1 A ARG 325 ? CD ? A ARG 248 CD 43 1 Y 1 A ARG 325 ? NE ? A ARG 248 NE 44 1 Y 1 A ARG 325 ? CZ ? A ARG 248 CZ 45 1 Y 1 A ARG 325 ? NH1 ? A ARG 248 NH1 46 1 Y 1 A ARG 325 ? NH2 ? A ARG 248 NH2 47 1 Y 1 A ARG 339 ? CG ? A ARG 262 CG 48 1 Y 1 A ARG 339 ? CD ? A ARG 262 CD 49 1 Y 1 A ARG 339 ? NE ? A ARG 262 NE 50 1 Y 1 A ARG 339 ? CZ ? A ARG 262 CZ 51 1 Y 1 A ARG 339 ? NH1 ? A ARG 262 NH1 52 1 Y 1 A ARG 339 ? NH2 ? A ARG 262 NH2 53 1 Y 1 A ASP 340 ? CG ? A ASP 263 CG 54 1 Y 1 A ASP 340 ? OD1 ? A ASP 263 OD1 55 1 Y 1 A ASP 340 ? OD2 ? A ASP 263 OD2 56 1 Y 1 A LYS 363 ? CG ? A LYS 286 CG 57 1 Y 1 A LYS 363 ? CD ? A LYS 286 CD 58 1 Y 1 A LYS 363 ? CE ? A LYS 286 CE 59 1 Y 1 A LYS 363 ? NZ ? A LYS 286 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 107 ? A SER 30 2 1 Y 1 A ARG 108 ? A ARG 31 3 1 Y 1 A ALA 109 ? A ALA 32 4 1 Y 1 A THR 110 ? A THR 33 5 1 Y 1 A VAL 111 ? A VAL 34 6 1 Y 1 A PRO 112 ? A PRO 35 7 1 Y 1 A GLY 113 ? A GLY 36 8 1 Y 1 A ASP 114 ? A ASP 37 9 1 Y 1 A GLN 115 ? A GLN 38 10 1 Y 1 A ASN 116 ? A ASN 39 11 1 Y 1 A ARG 117 ? A ARG 40 12 1 Y 1 A TYR 118 ? A TYR 41 13 1 Y 1 A GLY 119 ? A GLY 42 14 1 Y 1 A THR 120 ? A THR 43 15 1 Y 1 A THR 121 ? A THR 44 16 1 Y 1 A GLN 122 ? A GLN 45 17 1 Y 1 A GLU 123 ? A GLU 46 18 1 Y 1 A VAL 124 ? A VAL 47 19 1 Y 1 A GLU 125 ? A GLU 48 20 1 Y 1 A GLY 369 ? A GLY 292 21 1 Y 1 A ALA 370 ? A ALA 293 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'COBALT (II) ION' CO 3 'PHOSPHATE ION' PO4 4 '2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL' PE4 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'light scattering' _pdbx_struct_assembly_auth_evidence.details ? #