data_5VDK # _entry.id 5VDK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5VDK pdb_00005vdk 10.2210/pdb5vdk/pdb WWPDB D_1000227257 ? ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 5VC3 PDB unspecified . 5VC4 PDB unspecified . 5VC5 PDB unspecified . 5VD2 PDB unspecified . 5VC6 PDB unspecified . 5VD9 PDB unspecified . 5VD8 PDB unspecified . 5VD7 PDB unspecified . 5VD5 PDB unspecified . 5VD4 PDB unspecified . 5VDA PDB unspecified . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5VDK _pdbx_database_status.recvd_initial_deposition_date 2017-04-03 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhu, J.-Y.' 1 ? 'Schonbrunn, E.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Med. Chem.' _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 1520-4804 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 60 _citation.language ? _citation.page_first 7863 _citation.page_last 7875 _citation.title 'Structural Basis of Wee Kinases Functionality and Inactivation by Diverse Small Molecule Inhibitors.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.7b00996 _citation.pdbx_database_id_PubMed 28792760 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhu, J.Y.' 1 ? primary 'Cuellar, R.A.' 2 ? primary 'Berndt, N.' 3 ? primary 'Lee, H.E.' 4 ? primary 'Olesen, S.H.' 5 ? primary 'Martin, M.P.' 6 ? primary 'Jensen, J.T.' 7 ? primary 'Georg, G.I.' 8 ? primary 'Schonbrunn, E.' 9 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 5VDK _cell.details ? _cell.formula_units_Z ? _cell.length_a 68.810 _cell.length_a_esd ? _cell.length_b 68.810 _cell.length_b_esd ? _cell.length_c 58.040 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 3 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VDK _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Wee1-like protein kinase 2' 33071.246 1 2.7.10.2 ? 'UNP RESIDUES 202-492' ? 2 non-polymer syn ;1-[6-(2-hydroxypropan-2-yl)pyridin-2-yl]-6-{[4-(4-methylpiperazin-1-yl)phenyl]amino}-2-(prop-2-en-1-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one ; 500.595 1 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 3 ? ? ? ? 4 water nat water 18.015 7 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Wee1-like protein kinase 1B,Wee1B kinase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPEFGSTNMASRYEKEFLEVEKIGVGEFGTVYKCIKRLDGCVYAIKRSMKTFTELSNENSALHEVYAHAVLGHHPHVVRY YSSWAEDDHMIIQNEYCNGGSLQAAISENTKSGNHFEEPKLKDILLQISLGLNYIHNSSMVHLDIKPSNIFICHKMQSES SGVIEEVENEADWFLSANVMYKIGDLGHATSINKPKVEEGDSRFLANEILQEDYRHLPKADIFALGLTIAVAAGAESLPT NGAAWHHIRKGNFPDVPQELSESFSSLLKNMIQPDAEQRPSAAALARNTVLRPSLGK ; _entity_poly.pdbx_seq_one_letter_code_can ;GPEFGSTNMASRYEKEFLEVEKIGVGEFGTVYKCIKRLDGCVYAIKRSMKTFTELSNENSALHEVYAHAVLGHHPHVVRY YSSWAEDDHMIIQNEYCNGGSLQAAISENTKSGNHFEEPKLKDILLQISLGLNYIHNSSMVHLDIKPSNIFICHKMQSES SGVIEEVENEADWFLSANVMYKIGDLGHATSINKPKVEEGDSRFLANEILQEDYRHLPKADIFALGLTIAVAAGAESLPT NGAAWHHIRKGNFPDVPQELSESFSSLLKNMIQPDAEQRPSAAALARNTVLRPSLGK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLU n 1 4 PHE n 1 5 GLY n 1 6 SER n 1 7 THR n 1 8 ASN n 1 9 MET n 1 10 ALA n 1 11 SER n 1 12 ARG n 1 13 TYR n 1 14 GLU n 1 15 LYS n 1 16 GLU n 1 17 PHE n 1 18 LEU n 1 19 GLU n 1 20 VAL n 1 21 GLU n 1 22 LYS n 1 23 ILE n 1 24 GLY n 1 25 VAL n 1 26 GLY n 1 27 GLU n 1 28 PHE n 1 29 GLY n 1 30 THR n 1 31 VAL n 1 32 TYR n 1 33 LYS n 1 34 CYS n 1 35 ILE n 1 36 LYS n 1 37 ARG n 1 38 LEU n 1 39 ASP n 1 40 GLY n 1 41 CYS n 1 42 VAL n 1 43 TYR n 1 44 ALA n 1 45 ILE n 1 46 LYS n 1 47 ARG n 1 48 SER n 1 49 MET n 1 50 LYS n 1 51 THR n 1 52 PHE n 1 53 THR n 1 54 GLU n 1 55 LEU n 1 56 SER n 1 57 ASN n 1 58 GLU n 1 59 ASN n 1 60 SER n 1 61 ALA n 1 62 LEU n 1 63 HIS n 1 64 GLU n 1 65 VAL n 1 66 TYR n 1 67 ALA n 1 68 HIS n 1 69 ALA n 1 70 VAL n 1 71 LEU n 1 72 GLY n 1 73 HIS n 1 74 HIS n 1 75 PRO n 1 76 HIS n 1 77 VAL n 1 78 VAL n 1 79 ARG n 1 80 TYR n 1 81 TYR n 1 82 SER n 1 83 SER n 1 84 TRP n 1 85 ALA n 1 86 GLU n 1 87 ASP n 1 88 ASP n 1 89 HIS n 1 90 MET n 1 91 ILE n 1 92 ILE n 1 93 GLN n 1 94 ASN n 1 95 GLU n 1 96 TYR n 1 97 CYS n 1 98 ASN n 1 99 GLY n 1 100 GLY n 1 101 SER n 1 102 LEU n 1 103 GLN n 1 104 ALA n 1 105 ALA n 1 106 ILE n 1 107 SER n 1 108 GLU n 1 109 ASN n 1 110 THR n 1 111 LYS n 1 112 SER n 1 113 GLY n 1 114 ASN n 1 115 HIS n 1 116 PHE n 1 117 GLU n 1 118 GLU n 1 119 PRO n 1 120 LYS n 1 121 LEU n 1 122 LYS n 1 123 ASP n 1 124 ILE n 1 125 LEU n 1 126 LEU n 1 127 GLN n 1 128 ILE n 1 129 SER n 1 130 LEU n 1 131 GLY n 1 132 LEU n 1 133 ASN n 1 134 TYR n 1 135 ILE n 1 136 HIS n 1 137 ASN n 1 138 SER n 1 139 SER n 1 140 MET n 1 141 VAL n 1 142 HIS n 1 143 LEU n 1 144 ASP n 1 145 ILE n 1 146 LYS n 1 147 PRO n 1 148 SER n 1 149 ASN n 1 150 ILE n 1 151 PHE n 1 152 ILE n 1 153 CYS n 1 154 HIS n 1 155 LYS n 1 156 MET n 1 157 GLN n 1 158 SER n 1 159 GLU n 1 160 SER n 1 161 SER n 1 162 GLY n 1 163 VAL n 1 164 ILE n 1 165 GLU n 1 166 GLU n 1 167 VAL n 1 168 GLU n 1 169 ASN n 1 170 GLU n 1 171 ALA n 1 172 ASP n 1 173 TRP n 1 174 PHE n 1 175 LEU n 1 176 SER n 1 177 ALA n 1 178 ASN n 1 179 VAL n 1 180 MET n 1 181 TYR n 1 182 LYS n 1 183 ILE n 1 184 GLY n 1 185 ASP n 1 186 LEU n 1 187 GLY n 1 188 HIS n 1 189 ALA n 1 190 THR n 1 191 SER n 1 192 ILE n 1 193 ASN n 1 194 LYS n 1 195 PRO n 1 196 LYS n 1 197 VAL n 1 198 GLU n 1 199 GLU n 1 200 GLY n 1 201 ASP n 1 202 SER n 1 203 ARG n 1 204 PHE n 1 205 LEU n 1 206 ALA n 1 207 ASN n 1 208 GLU n 1 209 ILE n 1 210 LEU n 1 211 GLN n 1 212 GLU n 1 213 ASP n 1 214 TYR n 1 215 ARG n 1 216 HIS n 1 217 LEU n 1 218 PRO n 1 219 LYS n 1 220 ALA n 1 221 ASP n 1 222 ILE n 1 223 PHE n 1 224 ALA n 1 225 LEU n 1 226 GLY n 1 227 LEU n 1 228 THR n 1 229 ILE n 1 230 ALA n 1 231 VAL n 1 232 ALA n 1 233 ALA n 1 234 GLY n 1 235 ALA n 1 236 GLU n 1 237 SER n 1 238 LEU n 1 239 PRO n 1 240 THR n 1 241 ASN n 1 242 GLY n 1 243 ALA n 1 244 ALA n 1 245 TRP n 1 246 HIS n 1 247 HIS n 1 248 ILE n 1 249 ARG n 1 250 LYS n 1 251 GLY n 1 252 ASN n 1 253 PHE n 1 254 PRO n 1 255 ASP n 1 256 VAL n 1 257 PRO n 1 258 GLN n 1 259 GLU n 1 260 LEU n 1 261 SER n 1 262 GLU n 1 263 SER n 1 264 PHE n 1 265 SER n 1 266 SER n 1 267 LEU n 1 268 LEU n 1 269 LYS n 1 270 ASN n 1 271 MET n 1 272 ILE n 1 273 GLN n 1 274 PRO n 1 275 ASP n 1 276 ALA n 1 277 GLU n 1 278 GLN n 1 279 ARG n 1 280 PRO n 1 281 SER n 1 282 ALA n 1 283 ALA n 1 284 ALA n 1 285 LEU n 1 286 ALA n 1 287 ARG n 1 288 ASN n 1 289 THR n 1 290 VAL n 1 291 LEU n 1 292 ARG n 1 293 PRO n 1 294 SER n 1 295 LEU n 1 296 GLY n 1 297 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 297 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'WEE2, WEE1B' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-RIPL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET28A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code WEE2_HUMAN _struct_ref.pdbx_db_accession P0C1S8 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TNMASRYEKEFLEVEKIGVGEFGTVYKCIKRLDGCVYAIKRSMKTFTELSNENSALHEVYAHAVLGHHPHVVRYYSSWAE DDHMIIQNEYCNGGSLQAAISENTKSGNHFEEPKLKDILLQISLGLNYIHNSSMVHLDIKPSNIFICHKMQSESSGVIEE VENEADWFLSANVMYKIGDLGHATSINKPKVEEGDSRFLANEILQEDYRHLPKADIFALGLTIAVAAGAESLPTNGAAWH HIRKGNFPDVPQELSESFSSLLKNMIQPDAEQRPSAAALARNTVLRPSLGK ; _struct_ref.pdbx_align_begin 202 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5VDK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 7 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 297 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0C1S8 _struct_ref_seq.db_align_beg 202 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 492 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 202 _struct_ref_seq.pdbx_auth_seq_align_end 492 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5VDK GLY A 1 ? UNP P0C1S8 ? ? 'expression tag' 196 1 1 5VDK PRO A 2 ? UNP P0C1S8 ? ? 'expression tag' 197 2 1 5VDK GLU A 3 ? UNP P0C1S8 ? ? 'expression tag' 198 3 1 5VDK PHE A 4 ? UNP P0C1S8 ? ? 'expression tag' 199 4 1 5VDK GLY A 5 ? UNP P0C1S8 ? ? 'expression tag' 200 5 1 5VDK SER A 6 ? UNP P0C1S8 ? ? 'expression tag' 201 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8X7 non-polymer . ;1-[6-(2-hydroxypropan-2-yl)pyridin-2-yl]-6-{[4-(4-methylpiperazin-1-yl)phenyl]amino}-2-(prop-2-en-1-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one ; ? 'C27 H32 N8 O2' 500.595 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5VDK _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.40 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.72 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '14 MG/ML WEE2, 25 mM TRIS PH 8.0, 1 mM DTT, 0.2 M ammonium phosphate monobasic, 1.5 mM MK1775' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 93 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details mirrors _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RIGAKU SATURN 944+' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-05-14 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator mirrors _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate 46.120 _reflns.entry_id 5VDK _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.700 _reflns.d_resolution_low 18.794 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8422 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.000 _reflns.percent_possible_obs 99.700 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.374 _reflns.pdbx_Rmerge_I_obs 0.097 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.390 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.006 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.109 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.995 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.700 2.770 ? 3.400 ? ? ? ? 640 100.000 ? ? ? ? 0.570 ? ? ? ? ? ? ? ? 4.439 ? ? ? ? 0.646 ? ? 1 1 0.829 ? 2.770 2.850 ? 4.410 ? ? ? ? 591 100.000 ? ? ? ? 0.435 ? ? ? ? ? ? ? ? 4.448 ? ? ? ? 0.493 ? ? 2 1 0.883 ? 2.850 2.930 ? 5.090 ? ? ? ? 602 99.800 ? ? ? ? 0.342 ? ? ? ? ? ? ? ? 4.425 ? ? ? ? 0.389 ? ? 3 1 0.920 ? 2.930 3.020 ? 6.160 ? ? ? ? 559 100.000 ? ? ? ? 0.288 ? ? ? ? ? ? ? ? 4.454 ? ? ? ? 0.327 ? ? 4 1 0.941 ? 3.020 3.120 ? 7.450 ? ? ? ? 566 100.000 ? ? ? ? 0.235 ? ? ? ? ? ? ? ? 4.461 ? ? ? ? 0.267 ? ? 5 1 0.945 ? 3.120 3.230 ? 9.110 ? ? ? ? 553 100.000 ? ? ? ? 0.173 ? ? ? ? ? ? ? ? 4.420 ? ? ? ? 0.197 ? ? 6 1 0.971 ? 3.230 3.350 ? 10.470 ? ? ? ? 513 100.000 ? ? ? ? 0.145 ? ? ? ? ? ? ? ? 4.435 ? ? ? ? 0.165 ? ? 7 1 0.976 ? 3.350 3.490 ? 12.260 ? ? ? ? 503 100.000 ? ? ? ? 0.118 ? ? ? ? ? ? ? ? 4.421 ? ? ? ? 0.133 ? ? 8 1 0.986 ? 3.490 3.640 ? 14.290 ? ? ? ? 495 100.000 ? ? ? ? 0.096 ? ? ? ? ? ? ? ? 4.343 ? ? ? ? 0.109 ? ? 9 1 0.991 ? 3.640 3.820 ? 15.770 ? ? ? ? 445 100.000 ? ? ? ? 0.084 ? ? ? ? ? ? ? ? 4.357 ? ? ? ? 0.095 ? ? 10 1 0.990 ? 3.820 4.030 ? 17.740 ? ? ? ? 421 100.000 ? ? ? ? 0.074 ? ? ? ? ? ? ? ? 4.287 ? ? ? ? 0.084 ? ? 11 1 0.991 ? 4.030 4.270 ? 18.320 ? ? ? ? 429 100.000 ? ? ? ? 0.072 ? ? ? ? ? ? ? ? 4.280 ? ? ? ? 0.081 ? ? 12 1 0.990 ? 4.270 4.560 ? 19.850 ? ? ? ? 391 100.000 ? ? ? ? 0.064 ? ? ? ? ? ? ? ? 4.235 ? ? ? ? 0.072 ? ? 13 1 0.991 ? 4.560 4.930 ? 19.820 ? ? ? ? 361 100.000 ? ? ? ? 0.063 ? ? ? ? ? ? ? ? 4.258 ? ? ? ? 0.071 ? ? 14 1 0.994 ? 4.930 5.400 ? 19.210 ? ? ? ? 319 100.000 ? ? ? ? 0.065 ? ? ? ? ? ? ? ? 4.348 ? ? ? ? 0.073 ? ? 15 1 0.994 ? 5.400 6.040 ? 19.630 ? ? ? ? 303 100.000 ? ? ? ? 0.065 ? ? ? ? ? ? ? ? 4.370 ? ? ? ? 0.073 ? ? 16 1 0.992 ? 6.040 6.970 ? 20.340 ? ? ? ? 269 100.000 ? ? ? ? 0.063 ? ? ? ? ? ? ? ? 4.309 ? ? ? ? 0.071 ? ? 17 1 0.995 ? 6.970 8.540 ? 21.490 ? ? ? ? 218 100.000 ? ? ? ? 0.059 ? ? ? ? ? ? ? ? 4.243 ? ? ? ? 0.067 ? ? 18 1 0.993 ? 8.540 12.080 ? 23.230 ? ? ? ? 172 99.400 ? ? ? ? 0.055 ? ? ? ? ? ? ? ? 4.180 ? ? ? ? 0.061 ? ? 19 1 0.996 ? 12.080 18.794 ? 23.850 ? ? ? ? 72 75.800 ? ? ? ? 0.051 ? ? ? ? ? ? ? ? 4.319 ? ? ? ? 0.057 ? ? 20 1 0.993 ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5VDK _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.700 _refine.ls_d_res_low 18.794 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8421 _refine.ls_number_reflns_R_free 422 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.96 _refine.ls_percent_reflns_R_free 5.01 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2281 _refine.ls_R_factor_R_free 0.2843 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2253 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.00 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1X8B _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 32.37 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.48 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2044 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 52 _refine_hist.number_atoms_solvent 7 _refine_hist.number_atoms_total 2103 _refine_hist.d_res_high 2.700 _refine_hist.d_res_low 18.794 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.003 ? 2143 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.704 ? 2901 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 7.776 ? 1269 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.048 ? 309 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 369 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.7003 3.0896 . . 141 2667 100.00 . . . 0.3579 . 0.2688 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0896 3.8869 . . 140 2669 100.00 . . . 0.3034 . 0.2369 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.8869 18.7940 . . 141 2663 100.00 . . . 0.2500 . 0.2048 . . . . . . . . . . # _struct.entry_id 5VDK _struct.title 'Crystal structure of human WEE2 kinase domain in complex with MK1775' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5VDK _struct_keywords.text 'KINASE DOMAIN, CELL CYCLE, WEE2, TRANSFERASE, INHIBITOR, TRANSFERASE-TRANSFERASE INHIBITOR complex' _struct_keywords.pdbx_keywords 'TRANSFERASE/TRANSFERASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 11 ? GLU A 16 ? SER A 206 GLU A 211 1 ? 6 HELX_P HELX_P2 AA2 ASN A 59 ? LEU A 71 ? ASN A 254 LEU A 266 1 ? 13 HELX_P HELX_P3 AA3 SER A 101 ? SER A 112 ? SER A 296 SER A 307 1 ? 12 HELX_P HELX_P4 AA4 GLU A 117 ? SER A 138 ? GLU A 312 SER A 333 1 ? 22 HELX_P HELX_P5 AA5 ASP A 201 ? LEU A 205 ? ASP A 396 LEU A 400 5 ? 5 HELX_P HELX_P6 AA6 ALA A 206 ? GLN A 211 ? ALA A 401 GLN A 406 1 ? 6 HELX_P HELX_P7 AA7 LEU A 217 ? GLY A 234 ? LEU A 412 GLY A 429 1 ? 18 HELX_P HELX_P8 AA8 ASN A 241 ? ARG A 249 ? ASN A 436 ARG A 444 1 ? 9 HELX_P HELX_P9 AA9 SER A 261 ? GLN A 273 ? SER A 456 GLN A 468 1 ? 13 HELX_P HELX_P10 AB1 SER A 281 ? ARG A 287 ? SER A 476 ARG A 482 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag none _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_comp_id 8X7 _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_label_atom_id C21 _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_comp_id PO4 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id O1 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id 8X7 _struct_conn.ptnr1_auth_seq_id 501 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id PO4 _struct_conn.ptnr2_auth_seq_id 502 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.377 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PHE 52 A . ? PHE 247 A THR 53 A ? THR 248 A 1 -22.04 2 ASP 275 A . ? ASP 470 A ALA 276 A ? ALA 471 A 1 -0.59 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 2 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 17 ? GLY A 26 ? PHE A 212 GLY A 221 AA1 2 GLY A 29 ? LYS A 36 ? GLY A 224 LYS A 231 AA1 3 VAL A 42 ? SER A 48 ? VAL A 237 SER A 243 AA1 4 HIS A 89 ? GLU A 95 ? HIS A 284 GLU A 290 AA1 5 TYR A 80 ? GLU A 86 ? TYR A 275 GLU A 281 AA2 1 MET A 140 ? VAL A 141 ? MET A 335 VAL A 336 AA2 2 THR A 190 ? SER A 191 ? THR A 385 SER A 386 AA3 1 ILE A 150 ? CYS A 153 ? ILE A 345 CYS A 348 AA3 2 MET A 180 ? ILE A 183 ? MET A 375 ILE A 378 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLY A 24 ? N GLY A 219 O VAL A 31 ? O VAL A 226 AA1 2 3 N CYS A 34 ? N CYS A 229 O TYR A 43 ? O TYR A 238 AA1 3 4 N SER A 48 ? N SER A 243 O MET A 90 ? O MET A 285 AA1 4 5 O ILE A 91 ? O ILE A 286 N TRP A 84 ? N TRP A 279 AA2 1 2 N VAL A 141 ? N VAL A 336 O THR A 190 ? O THR A 385 AA3 1 2 N PHE A 151 ? N PHE A 346 O LYS A 182 ? O LYS A 377 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PO4 503 ? 6 'binding site for residue PO4 A 503' AC2 Software A PO4 504 ? 5 'binding site for residue PO4 A 504' AC3 Software A 8X7 501 ? 16 'binding site for residues 8X7 A 501 and PO4 A 502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HIS A 68 ? HIS A 263 . ? 1_555 ? 2 AC1 6 LEU A 71 ? LEU A 266 . ? 1_555 ? 3 AC1 6 GLY A 72 ? GLY A 267 . ? 1_555 ? 4 AC1 6 VAL A 77 ? VAL A 272 . ? 1_555 ? 5 AC1 6 VAL A 78 ? VAL A 273 . ? 1_555 ? 6 AC1 6 TYR A 80 ? TYR A 275 . ? 1_555 ? 7 AC2 5 ASP A 144 ? ASP A 339 . ? 1_555 ? 8 AC2 5 LYS A 146 ? LYS A 341 . ? 1_555 ? 9 AC2 5 HIS A 188 ? HIS A 383 . ? 1_555 ? 10 AC2 5 GLY A 200 ? GLY A 395 . ? 1_555 ? 11 AC2 5 ASP A 201 ? ASP A 396 . ? 1_555 ? 12 AC3 16 VAL A 25 ? VAL A 220 . ? 1_555 ? 13 AC3 16 GLY A 26 ? GLY A 221 . ? 1_555 ? 14 AC3 16 GLU A 27 ? GLU A 222 . ? 1_555 ? 15 AC3 16 LYS A 46 ? LYS A 241 . ? 1_555 ? 16 AC3 16 GLU A 64 ? GLU A 259 . ? 1_555 ? 17 AC3 16 HIS A 68 ? HIS A 263 . ? 1_555 ? 18 AC3 16 VAL A 78 ? VAL A 273 . ? 1_555 ? 19 AC3 16 ILE A 92 ? ILE A 287 . ? 1_555 ? 20 AC3 16 ASN A 94 ? ASN A 289 . ? 1_555 ? 21 AC3 16 GLU A 95 ? GLU A 290 . ? 1_555 ? 22 AC3 16 TYR A 96 ? TYR A 291 . ? 1_555 ? 23 AC3 16 CYS A 97 ? CYS A 292 . ? 1_555 ? 24 AC3 16 GLY A 100 ? GLY A 295 . ? 1_555 ? 25 AC3 16 PHE A 151 ? PHE A 346 . ? 1_555 ? 26 AC3 16 ASP A 185 ? ASP A 380 . ? 1_555 ? 27 AC3 16 LEU A 186 ? LEU A 381 . ? 1_555 ? # _atom_sites.entry_id 5VDK _atom_sites.fract_transf_matrix[1][1] 0.014533 _atom_sites.fract_transf_matrix[1][2] 0.008390 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016781 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017229 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 196 ? ? ? A . n A 1 2 PRO 2 197 ? ? ? A . n A 1 3 GLU 3 198 ? ? ? A . n A 1 4 PHE 4 199 ? ? ? A . n A 1 5 GLY 5 200 ? ? ? A . n A 1 6 SER 6 201 ? ? ? A . n A 1 7 THR 7 202 ? ? ? A . n A 1 8 ASN 8 203 ? ? ? A . n A 1 9 MET 9 204 204 MET MET A . n A 1 10 ALA 10 205 205 ALA ALA A . n A 1 11 SER 11 206 206 SER SER A . n A 1 12 ARG 12 207 207 ARG ARG A . n A 1 13 TYR 13 208 208 TYR TYR A . n A 1 14 GLU 14 209 209 GLU GLU A . n A 1 15 LYS 15 210 210 LYS LYS A . n A 1 16 GLU 16 211 211 GLU GLU A . n A 1 17 PHE 17 212 212 PHE PHE A . n A 1 18 LEU 18 213 213 LEU LEU A . n A 1 19 GLU 19 214 214 GLU GLU A . n A 1 20 VAL 20 215 215 VAL VAL A . n A 1 21 GLU 21 216 216 GLU GLU A . n A 1 22 LYS 22 217 217 LYS LYS A . n A 1 23 ILE 23 218 218 ILE ILE A . n A 1 24 GLY 24 219 219 GLY GLY A . n A 1 25 VAL 25 220 220 VAL VAL A . n A 1 26 GLY 26 221 221 GLY GLY A . n A 1 27 GLU 27 222 222 GLU GLU A . n A 1 28 PHE 28 223 223 PHE PHE A . n A 1 29 GLY 29 224 224 GLY GLY A . n A 1 30 THR 30 225 225 THR THR A . n A 1 31 VAL 31 226 226 VAL VAL A . n A 1 32 TYR 32 227 227 TYR TYR A . n A 1 33 LYS 33 228 228 LYS LYS A . n A 1 34 CYS 34 229 229 CYS CYS A . n A 1 35 ILE 35 230 230 ILE ILE A . n A 1 36 LYS 36 231 231 LYS LYS A . n A 1 37 ARG 37 232 232 ARG ARG A . n A 1 38 LEU 38 233 233 LEU LEU A . n A 1 39 ASP 39 234 234 ASP ASP A . n A 1 40 GLY 40 235 235 GLY GLY A . n A 1 41 CYS 41 236 236 CYS CYS A . n A 1 42 VAL 42 237 237 VAL VAL A . n A 1 43 TYR 43 238 238 TYR TYR A . n A 1 44 ALA 44 239 239 ALA ALA A . n A 1 45 ILE 45 240 240 ILE ILE A . n A 1 46 LYS 46 241 241 LYS LYS A . n A 1 47 ARG 47 242 242 ARG ARG A . n A 1 48 SER 48 243 243 SER SER A . n A 1 49 MET 49 244 244 MET MET A . n A 1 50 LYS 50 245 245 LYS LYS A . n A 1 51 THR 51 246 246 THR THR A . n A 1 52 PHE 52 247 247 PHE PHE A . n A 1 53 THR 53 248 248 THR THR A . n A 1 54 GLU 54 249 249 GLU GLU A . n A 1 55 LEU 55 250 250 LEU LEU A . n A 1 56 SER 56 251 251 SER SER A . n A 1 57 ASN 57 252 252 ASN ASN A . n A 1 58 GLU 58 253 253 GLU GLU A . n A 1 59 ASN 59 254 254 ASN ASN A . n A 1 60 SER 60 255 255 SER SER A . n A 1 61 ALA 61 256 256 ALA ALA A . n A 1 62 LEU 62 257 257 LEU LEU A . n A 1 63 HIS 63 258 258 HIS HIS A . n A 1 64 GLU 64 259 259 GLU GLU A . n A 1 65 VAL 65 260 260 VAL VAL A . n A 1 66 TYR 66 261 261 TYR TYR A . n A 1 67 ALA 67 262 262 ALA ALA A . n A 1 68 HIS 68 263 263 HIS HIS A . n A 1 69 ALA 69 264 264 ALA ALA A . n A 1 70 VAL 70 265 265 VAL VAL A . n A 1 71 LEU 71 266 266 LEU LEU A . n A 1 72 GLY 72 267 267 GLY GLY A . n A 1 73 HIS 73 268 268 HIS HIS A . n A 1 74 HIS 74 269 269 HIS HIS A . n A 1 75 PRO 75 270 270 PRO PRO A . n A 1 76 HIS 76 271 271 HIS HIS A . n A 1 77 VAL 77 272 272 VAL VAL A . n A 1 78 VAL 78 273 273 VAL VAL A . n A 1 79 ARG 79 274 274 ARG ARG A . n A 1 80 TYR 80 275 275 TYR TYR A . n A 1 81 TYR 81 276 276 TYR TYR A . n A 1 82 SER 82 277 277 SER SER A . n A 1 83 SER 83 278 278 SER SER A . n A 1 84 TRP 84 279 279 TRP TRP A . n A 1 85 ALA 85 280 280 ALA ALA A . n A 1 86 GLU 86 281 281 GLU GLU A . n A 1 87 ASP 87 282 282 ASP ASP A . n A 1 88 ASP 88 283 283 ASP ASP A . n A 1 89 HIS 89 284 284 HIS HIS A . n A 1 90 MET 90 285 285 MET MET A . n A 1 91 ILE 91 286 286 ILE ILE A . n A 1 92 ILE 92 287 287 ILE ILE A . n A 1 93 GLN 93 288 288 GLN GLN A . n A 1 94 ASN 94 289 289 ASN ASN A . n A 1 95 GLU 95 290 290 GLU GLU A . n A 1 96 TYR 96 291 291 TYR TYR A . n A 1 97 CYS 97 292 292 CYS CYS A . n A 1 98 ASN 98 293 293 ASN ASN A . n A 1 99 GLY 99 294 294 GLY GLY A . n A 1 100 GLY 100 295 295 GLY GLY A . n A 1 101 SER 101 296 296 SER SER A . n A 1 102 LEU 102 297 297 LEU LEU A . n A 1 103 GLN 103 298 298 GLN GLN A . n A 1 104 ALA 104 299 299 ALA ALA A . n A 1 105 ALA 105 300 300 ALA ALA A . n A 1 106 ILE 106 301 301 ILE ILE A . n A 1 107 SER 107 302 302 SER SER A . n A 1 108 GLU 108 303 303 GLU GLU A . n A 1 109 ASN 109 304 304 ASN ASN A . n A 1 110 THR 110 305 305 THR THR A . n A 1 111 LYS 111 306 306 LYS LYS A . n A 1 112 SER 112 307 307 SER SER A . n A 1 113 GLY 113 308 308 GLY GLY A . n A 1 114 ASN 114 309 309 ASN ASN A . n A 1 115 HIS 115 310 310 HIS HIS A . n A 1 116 PHE 116 311 311 PHE PHE A . n A 1 117 GLU 117 312 312 GLU GLU A . n A 1 118 GLU 118 313 313 GLU GLU A . n A 1 119 PRO 119 314 314 PRO PRO A . n A 1 120 LYS 120 315 315 LYS LYS A . n A 1 121 LEU 121 316 316 LEU LEU A . n A 1 122 LYS 122 317 317 LYS LYS A . n A 1 123 ASP 123 318 318 ASP ASP A . n A 1 124 ILE 124 319 319 ILE ILE A . n A 1 125 LEU 125 320 320 LEU LEU A . n A 1 126 LEU 126 321 321 LEU LEU A . n A 1 127 GLN 127 322 322 GLN GLN A . n A 1 128 ILE 128 323 323 ILE ILE A . n A 1 129 SER 129 324 324 SER SER A . n A 1 130 LEU 130 325 325 LEU LEU A . n A 1 131 GLY 131 326 326 GLY GLY A . n A 1 132 LEU 132 327 327 LEU LEU A . n A 1 133 ASN 133 328 328 ASN ASN A . n A 1 134 TYR 134 329 329 TYR TYR A . n A 1 135 ILE 135 330 330 ILE ILE A . n A 1 136 HIS 136 331 331 HIS HIS A . n A 1 137 ASN 137 332 332 ASN ASN A . n A 1 138 SER 138 333 333 SER SER A . n A 1 139 SER 139 334 334 SER SER A . n A 1 140 MET 140 335 335 MET MET A . n A 1 141 VAL 141 336 336 VAL VAL A . n A 1 142 HIS 142 337 337 HIS HIS A . n A 1 143 LEU 143 338 338 LEU LEU A . n A 1 144 ASP 144 339 339 ASP ASP A . n A 1 145 ILE 145 340 340 ILE ILE A . n A 1 146 LYS 146 341 341 LYS LYS A . n A 1 147 PRO 147 342 342 PRO PRO A . n A 1 148 SER 148 343 343 SER SER A . n A 1 149 ASN 149 344 344 ASN ASN A . n A 1 150 ILE 150 345 345 ILE ILE A . n A 1 151 PHE 151 346 346 PHE PHE A . n A 1 152 ILE 152 347 347 ILE ILE A . n A 1 153 CYS 153 348 348 CYS CYS A . n A 1 154 HIS 154 349 349 HIS HIS A . n A 1 155 LYS 155 350 350 LYS LYS A . n A 1 156 MET 156 351 ? ? ? A . n A 1 157 GLN 157 352 ? ? ? A . n A 1 158 SER 158 353 ? ? ? A . n A 1 159 GLU 159 354 ? ? ? A . n A 1 160 SER 160 355 ? ? ? A . n A 1 161 SER 161 356 ? ? ? A . n A 1 162 GLY 162 357 ? ? ? A . n A 1 163 VAL 163 358 ? ? ? A . n A 1 164 ILE 164 359 ? ? ? A . n A 1 165 GLU 165 360 ? ? ? A . n A 1 166 GLU 166 361 ? ? ? A . n A 1 167 VAL 167 362 ? ? ? A . n A 1 168 GLU 168 363 ? ? ? A . n A 1 169 ASN 169 364 ? ? ? A . n A 1 170 GLU 170 365 ? ? ? A . n A 1 171 ALA 171 366 ? ? ? A . n A 1 172 ASP 172 367 ? ? ? A . n A 1 173 TRP 173 368 ? ? ? A . n A 1 174 PHE 174 369 ? ? ? A . n A 1 175 LEU 175 370 ? ? ? A . n A 1 176 SER 176 371 ? ? ? A . n A 1 177 ALA 177 372 ? ? ? A . n A 1 178 ASN 178 373 ? ? ? A . n A 1 179 VAL 179 374 374 VAL VAL A . n A 1 180 MET 180 375 375 MET MET A . n A 1 181 TYR 181 376 376 TYR TYR A . n A 1 182 LYS 182 377 377 LYS LYS A . n A 1 183 ILE 183 378 378 ILE ILE A . n A 1 184 GLY 184 379 379 GLY GLY A . n A 1 185 ASP 185 380 380 ASP ASP A . n A 1 186 LEU 186 381 381 LEU LEU A . n A 1 187 GLY 187 382 382 GLY GLY A . n A 1 188 HIS 188 383 383 HIS HIS A . n A 1 189 ALA 189 384 384 ALA ALA A . n A 1 190 THR 190 385 385 THR THR A . n A 1 191 SER 191 386 386 SER SER A . n A 1 192 ILE 192 387 387 ILE ILE A . n A 1 193 ASN 193 388 388 ASN ASN A . n A 1 194 LYS 194 389 389 LYS LYS A . n A 1 195 PRO 195 390 390 PRO PRO A . n A 1 196 LYS 196 391 391 LYS LYS A . n A 1 197 VAL 197 392 392 VAL VAL A . n A 1 198 GLU 198 393 393 GLU GLU A . n A 1 199 GLU 199 394 394 GLU GLU A . n A 1 200 GLY 200 395 395 GLY GLY A . n A 1 201 ASP 201 396 396 ASP ASP A . n A 1 202 SER 202 397 397 SER SER A . n A 1 203 ARG 203 398 398 ARG ARG A . n A 1 204 PHE 204 399 399 PHE PHE A . n A 1 205 LEU 205 400 400 LEU LEU A . n A 1 206 ALA 206 401 401 ALA ALA A . n A 1 207 ASN 207 402 402 ASN ASN A . n A 1 208 GLU 208 403 403 GLU GLU A . n A 1 209 ILE 209 404 404 ILE ILE A . n A 1 210 LEU 210 405 405 LEU LEU A . n A 1 211 GLN 211 406 406 GLN GLN A . n A 1 212 GLU 212 407 407 GLU GLU A . n A 1 213 ASP 213 408 408 ASP ASP A . n A 1 214 TYR 214 409 409 TYR TYR A . n A 1 215 ARG 215 410 410 ARG ARG A . n A 1 216 HIS 216 411 411 HIS HIS A . n A 1 217 LEU 217 412 412 LEU LEU A . n A 1 218 PRO 218 413 413 PRO PRO A . n A 1 219 LYS 219 414 414 LYS LYS A . n A 1 220 ALA 220 415 415 ALA ALA A . n A 1 221 ASP 221 416 416 ASP ASP A . n A 1 222 ILE 222 417 417 ILE ILE A . n A 1 223 PHE 223 418 418 PHE PHE A . n A 1 224 ALA 224 419 419 ALA ALA A . n A 1 225 LEU 225 420 420 LEU LEU A . n A 1 226 GLY 226 421 421 GLY GLY A . n A 1 227 LEU 227 422 422 LEU LEU A . n A 1 228 THR 228 423 423 THR THR A . n A 1 229 ILE 229 424 424 ILE ILE A . n A 1 230 ALA 230 425 425 ALA ALA A . n A 1 231 VAL 231 426 426 VAL VAL A . n A 1 232 ALA 232 427 427 ALA ALA A . n A 1 233 ALA 233 428 428 ALA ALA A . n A 1 234 GLY 234 429 429 GLY GLY A . n A 1 235 ALA 235 430 430 ALA ALA A . n A 1 236 GLU 236 431 431 GLU GLU A . n A 1 237 SER 237 432 432 SER SER A . n A 1 238 LEU 238 433 433 LEU LEU A . n A 1 239 PRO 239 434 434 PRO PRO A . n A 1 240 THR 240 435 435 THR THR A . n A 1 241 ASN 241 436 436 ASN ASN A . n A 1 242 GLY 242 437 437 GLY GLY A . n A 1 243 ALA 243 438 438 ALA ALA A . n A 1 244 ALA 244 439 439 ALA ALA A . n A 1 245 TRP 245 440 440 TRP TRP A . n A 1 246 HIS 246 441 441 HIS HIS A . n A 1 247 HIS 247 442 442 HIS HIS A . n A 1 248 ILE 248 443 443 ILE ILE A . n A 1 249 ARG 249 444 444 ARG ARG A . n A 1 250 LYS 250 445 445 LYS LYS A . n A 1 251 GLY 251 446 446 GLY GLY A . n A 1 252 ASN 252 447 447 ASN ASN A . n A 1 253 PHE 253 448 448 PHE PHE A . n A 1 254 PRO 254 449 449 PRO PRO A . n A 1 255 ASP 255 450 450 ASP ASP A . n A 1 256 VAL 256 451 451 VAL VAL A . n A 1 257 PRO 257 452 452 PRO PRO A . n A 1 258 GLN 258 453 453 GLN GLN A . n A 1 259 GLU 259 454 454 GLU GLU A . n A 1 260 LEU 260 455 455 LEU LEU A . n A 1 261 SER 261 456 456 SER SER A . n A 1 262 GLU 262 457 457 GLU GLU A . n A 1 263 SER 263 458 458 SER SER A . n A 1 264 PHE 264 459 459 PHE PHE A . n A 1 265 SER 265 460 460 SER SER A . n A 1 266 SER 266 461 461 SER SER A . n A 1 267 LEU 267 462 462 LEU LEU A . n A 1 268 LEU 268 463 463 LEU LEU A . n A 1 269 LYS 269 464 464 LYS LYS A . n A 1 270 ASN 270 465 465 ASN ASN A . n A 1 271 MET 271 466 466 MET MET A . n A 1 272 ILE 272 467 467 ILE ILE A . n A 1 273 GLN 273 468 468 GLN GLN A . n A 1 274 PRO 274 469 469 PRO PRO A . n A 1 275 ASP 275 470 470 ASP ASP A . n A 1 276 ALA 276 471 471 ALA ALA A . n A 1 277 GLU 277 472 472 GLU GLU A . n A 1 278 GLN 278 473 473 GLN GLN A . n A 1 279 ARG 279 474 474 ARG ARG A . n A 1 280 PRO 280 475 475 PRO PRO A . n A 1 281 SER 281 476 476 SER SER A . n A 1 282 ALA 282 477 477 ALA ALA A . n A 1 283 ALA 283 478 478 ALA ALA A . n A 1 284 ALA 284 479 479 ALA ALA A . n A 1 285 LEU 285 480 480 LEU LEU A . n A 1 286 ALA 286 481 481 ALA ALA A . n A 1 287 ARG 287 482 482 ARG ARG A . n A 1 288 ASN 288 483 483 ASN ASN A . n A 1 289 THR 289 484 484 THR THR A . n A 1 290 VAL 290 485 485 VAL VAL A . n A 1 291 LEU 291 486 486 LEU LEU A . n A 1 292 ARG 292 487 ? ? ? A . n A 1 293 PRO 293 488 ? ? ? A . n A 1 294 SER 294 489 ? ? ? A . n A 1 295 LEU 295 490 ? ? ? A . n A 1 296 GLY 296 491 ? ? ? A . n A 1 297 LYS 297 492 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 8X7 1 501 1 8X7 MK1 A . C 3 PO4 1 502 1 PO4 PO4 A . D 3 PO4 1 503 2 PO4 PO4 A . E 3 PO4 1 504 3 PO4 PO4 A . F 4 HOH 1 601 3 HOH HOH A . F 4 HOH 2 602 4 HOH HOH A . F 4 HOH 3 603 1 HOH HOH A . F 4 HOH 4 604 6 HOH HOH A . F 4 HOH 5 605 7 HOH HOH A . F 4 HOH 6 606 8 HOH HOH A . F 4 HOH 7 607 9 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-08-23 2 'Structure model' 1 1 2017-10-11 3 'Structure model' 1 2 2019-12-11 4 'Structure model' 1 3 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' pdbx_audit_support 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 7 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.title' 5 2 'Structure model' '_citation_author.name' 6 3 'Structure model' '_pdbx_audit_support.funding_organization' 7 4 'Structure model' '_database_2.pdbx_DOI' 8 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -4.9923 -34.7134 -14.1907 0.4188 0.3420 0.2692 0.0097 0.1093 0.0223 3.5574 5.4725 5.0452 0.7230 1.1295 0.7182 0.4138 0.2626 -0.0531 0.0853 -0.3593 0.2399 0.3875 -0.0379 -0.0047 'X-RAY DIFFRACTION' 2 ? refined 3.2253 -22.6406 -1.4271 0.4503 0.3726 0.5737 -0.0378 0.0165 -0.0587 4.8763 3.8757 7.9332 -2.6620 -0.7857 1.8015 -0.0966 -0.3220 1.0473 0.1236 0.6053 -1.1851 -0.7245 0.9381 0.1058 'X-RAY DIFFRACTION' 3 ? refined -14.4781 -12.3066 -4.4716 0.4246 0.4634 0.5305 0.1767 -0.0182 -0.0306 2.4581 4.8198 3.3362 -1.4605 -0.3381 0.8026 -0.0260 -0.0829 0.6377 0.0320 -0.0794 0.3422 -0.6448 -0.6760 -0.0484 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 204 through 243 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 244 through 265 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 266 through 486 ) ; # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.11.1_2575: ???)' 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 205 ? ? -104.47 -165.72 2 1 THR A 248 ? ? -151.73 -130.70 3 1 GLU A 249 ? ? -132.94 -148.90 4 1 SER A 251 ? ? -71.71 -162.43 5 1 ASN A 252 ? ? 61.00 -82.48 6 1 GLU A 253 ? ? -78.26 46.25 7 1 ASP A 339 ? ? -157.87 39.21 8 1 HIS A 349 ? ? 51.94 73.70 9 1 ASP A 380 ? ? 59.49 97.22 10 1 LYS A 445 ? ? -94.23 30.09 11 1 PRO A 452 ? ? -62.94 77.38 12 1 GLN A 453 ? ? -177.97 143.45 13 1 ASP A 470 ? ? 50.12 108.64 14 1 ALA A 471 ? ? -166.90 -66.57 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 196 ? A GLY 1 2 1 Y 1 A PRO 197 ? A PRO 2 3 1 Y 1 A GLU 198 ? A GLU 3 4 1 Y 1 A PHE 199 ? A PHE 4 5 1 Y 1 A GLY 200 ? A GLY 5 6 1 Y 1 A SER 201 ? A SER 6 7 1 Y 1 A THR 202 ? A THR 7 8 1 Y 1 A ASN 203 ? A ASN 8 9 1 Y 1 A MET 351 ? A MET 156 10 1 Y 1 A GLN 352 ? A GLN 157 11 1 Y 1 A SER 353 ? A SER 158 12 1 Y 1 A GLU 354 ? A GLU 159 13 1 Y 1 A SER 355 ? A SER 160 14 1 Y 1 A SER 356 ? A SER 161 15 1 Y 1 A GLY 357 ? A GLY 162 16 1 Y 1 A VAL 358 ? A VAL 163 17 1 Y 1 A ILE 359 ? A ILE 164 18 1 Y 1 A GLU 360 ? A GLU 165 19 1 Y 1 A GLU 361 ? A GLU 166 20 1 Y 1 A VAL 362 ? A VAL 167 21 1 Y 1 A GLU 363 ? A GLU 168 22 1 Y 1 A ASN 364 ? A ASN 169 23 1 Y 1 A GLU 365 ? A GLU 170 24 1 Y 1 A ALA 366 ? A ALA 171 25 1 Y 1 A ASP 367 ? A ASP 172 26 1 Y 1 A TRP 368 ? A TRP 173 27 1 Y 1 A PHE 369 ? A PHE 174 28 1 Y 1 A LEU 370 ? A LEU 175 29 1 Y 1 A SER 371 ? A SER 176 30 1 Y 1 A ALA 372 ? A ALA 177 31 1 Y 1 A ASN 373 ? A ASN 178 32 1 Y 1 A ARG 487 ? A ARG 292 33 1 Y 1 A PRO 488 ? A PRO 293 34 1 Y 1 A SER 489 ? A SER 294 35 1 Y 1 A LEU 490 ? A LEU 295 36 1 Y 1 A GLY 491 ? A GLY 296 37 1 Y 1 A LYS 492 ? A LYS 297 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8X7 C01 C N N 1 8X7 N02 N N N 2 8X7 C03 C N N 3 8X7 C04 C N N 4 8X7 N05 N N N 5 8X7 C06 C N N 6 8X7 C07 C N N 7 8X7 C08 C Y N 8 8X7 C09 C Y N 9 8X7 C10 C Y N 10 8X7 C11 C Y N 11 8X7 N12 N N N 12 8X7 C13 C Y N 13 8X7 N14 N Y N 14 8X7 C15 C Y N 15 8X7 C16 C Y N 16 8X7 C17 C N N 17 8X7 O18 O N N 18 8X7 N19 N N N 19 8X7 C20 C N N 20 8X7 C21 C N N 21 8X7 C22 C N N 22 8X7 N23 N N N 23 8X7 C24 C Y N 24 8X7 N25 N Y N 25 8X7 C26 C Y N 26 8X7 N27 N Y N 27 8X7 C28 C Y N 28 8X7 C29 C Y N 29 8X7 C30 C Y N 30 8X7 C31 C Y N 31 8X7 C32 C N N 32 8X7 C33 C N N 33 8X7 C34 C N N 34 8X7 O35 O N N 35 8X7 C36 C Y N 36 8X7 C37 C Y N 37 8X7 H011 H N N 38 8X7 H013 H N N 39 8X7 H012 H N N 40 8X7 H031 H N N 41 8X7 H032 H N N 42 8X7 H041 H N N 43 8X7 H042 H N N 44 8X7 H061 H N N 45 8X7 H062 H N N 46 8X7 H072 H N N 47 8X7 H071 H N N 48 8X7 H091 H N N 49 8X7 H101 H N N 50 8X7 H121 H N N 51 8X7 H151 H N N 52 8X7 H202 H N N 53 8X7 H201 H N N 54 8X7 H211 H N N 55 8X7 H221 H N N 56 8X7 H222 H N N 57 8X7 H291 H N N 58 8X7 H301 H N N 59 8X7 H311 H N N 60 8X7 H331 H N N 61 8X7 H333 H N N 62 8X7 H332 H N N 63 8X7 H342 H N N 64 8X7 H341 H N N 65 8X7 H343 H N N 66 8X7 H351 H N N 67 8X7 H361 H N N 68 8X7 H371 H N N 69 ALA N N N N 70 ALA CA C N S 71 ALA C C N N 72 ALA O O N N 73 ALA CB C N N 74 ALA OXT O N N 75 ALA H H N N 76 ALA H2 H N N 77 ALA HA H N N 78 ALA HB1 H N N 79 ALA HB2 H N N 80 ALA HB3 H N N 81 ALA HXT H N N 82 ARG N N N N 83 ARG CA C N S 84 ARG C C N N 85 ARG O O N N 86 ARG CB C N N 87 ARG CG C N N 88 ARG CD C N N 89 ARG NE N N N 90 ARG CZ C N N 91 ARG NH1 N N N 92 ARG NH2 N N N 93 ARG OXT O N N 94 ARG H H N N 95 ARG H2 H N N 96 ARG HA H N N 97 ARG HB2 H N N 98 ARG HB3 H N N 99 ARG HG2 H N N 100 ARG HG3 H N N 101 ARG HD2 H N N 102 ARG HD3 H N N 103 ARG HE H N N 104 ARG HH11 H N N 105 ARG HH12 H N N 106 ARG HH21 H N N 107 ARG HH22 H N N 108 ARG HXT H N N 109 ASN N N N N 110 ASN CA C N S 111 ASN C C N N 112 ASN O O N N 113 ASN CB C N N 114 ASN CG C N N 115 ASN OD1 O N N 116 ASN ND2 N N N 117 ASN OXT O N N 118 ASN H H N N 119 ASN H2 H N N 120 ASN HA H N N 121 ASN HB2 H N N 122 ASN HB3 H N N 123 ASN HD21 H N N 124 ASN HD22 H N N 125 ASN HXT H N N 126 ASP N N N N 127 ASP CA C N S 128 ASP C C N N 129 ASP O O N N 130 ASP CB C N N 131 ASP CG C N N 132 ASP OD1 O N N 133 ASP OD2 O N N 134 ASP OXT O N N 135 ASP H H N N 136 ASP H2 H N N 137 ASP HA H N N 138 ASP HB2 H N N 139 ASP HB3 H N N 140 ASP HD2 H N N 141 ASP HXT H N N 142 CYS N N N N 143 CYS CA C N R 144 CYS C C N N 145 CYS O O N N 146 CYS CB C N N 147 CYS SG S N N 148 CYS OXT O N N 149 CYS H H N N 150 CYS H2 H N N 151 CYS HA H N N 152 CYS HB2 H N N 153 CYS HB3 H N N 154 CYS HG H N N 155 CYS HXT H N N 156 GLN N N N N 157 GLN CA C N S 158 GLN C C N N 159 GLN O O N N 160 GLN CB C N N 161 GLN CG C N N 162 GLN CD C N N 163 GLN OE1 O N N 164 GLN NE2 N N N 165 GLN OXT O N N 166 GLN H H N N 167 GLN H2 H N N 168 GLN HA H N N 169 GLN HB2 H N N 170 GLN HB3 H N N 171 GLN HG2 H N N 172 GLN HG3 H N N 173 GLN HE21 H N N 174 GLN HE22 H N N 175 GLN HXT H N N 176 GLU N N N N 177 GLU CA C N S 178 GLU C C N N 179 GLU O O N N 180 GLU CB C N N 181 GLU CG C N N 182 GLU CD C N N 183 GLU OE1 O N N 184 GLU OE2 O N N 185 GLU OXT O N N 186 GLU H H N N 187 GLU H2 H N N 188 GLU HA H N N 189 GLU HB2 H N N 190 GLU HB3 H N N 191 GLU HG2 H N N 192 GLU HG3 H N N 193 GLU HE2 H N N 194 GLU HXT H N N 195 GLY N N N N 196 GLY CA C N N 197 GLY C C N N 198 GLY O O N N 199 GLY OXT O N N 200 GLY H H N N 201 GLY H2 H N N 202 GLY HA2 H N N 203 GLY HA3 H N N 204 GLY HXT H N N 205 HIS N N N N 206 HIS CA C N S 207 HIS C C N N 208 HIS O O N N 209 HIS CB C N N 210 HIS CG C Y N 211 HIS ND1 N Y N 212 HIS CD2 C Y N 213 HIS CE1 C Y N 214 HIS NE2 N Y N 215 HIS OXT O N N 216 HIS H H N N 217 HIS H2 H N N 218 HIS HA H N N 219 HIS HB2 H N N 220 HIS HB3 H N N 221 HIS HD1 H N N 222 HIS HD2 H N N 223 HIS HE1 H N N 224 HIS HE2 H N N 225 HIS HXT H N N 226 HOH O O N N 227 HOH H1 H N N 228 HOH H2 H N N 229 ILE N N N N 230 ILE CA C N S 231 ILE C C N N 232 ILE O O N N 233 ILE CB C N S 234 ILE CG1 C N N 235 ILE CG2 C N N 236 ILE CD1 C N N 237 ILE OXT O N N 238 ILE H H N N 239 ILE H2 H N N 240 ILE HA H N N 241 ILE HB H N N 242 ILE HG12 H N N 243 ILE HG13 H N N 244 ILE HG21 H N N 245 ILE HG22 H N N 246 ILE HG23 H N N 247 ILE HD11 H N N 248 ILE HD12 H N N 249 ILE HD13 H N N 250 ILE HXT H N N 251 LEU N N N N 252 LEU CA C N S 253 LEU C C N N 254 LEU O O N N 255 LEU CB C N N 256 LEU CG C N N 257 LEU CD1 C N N 258 LEU CD2 C N N 259 LEU OXT O N N 260 LEU H H N N 261 LEU H2 H N N 262 LEU HA H N N 263 LEU HB2 H N N 264 LEU HB3 H N N 265 LEU HG H N N 266 LEU HD11 H N N 267 LEU HD12 H N N 268 LEU HD13 H N N 269 LEU HD21 H N N 270 LEU HD22 H N N 271 LEU HD23 H N N 272 LEU HXT H N N 273 LYS N N N N 274 LYS CA C N S 275 LYS C C N N 276 LYS O O N N 277 LYS CB C N N 278 LYS CG C N N 279 LYS CD C N N 280 LYS CE C N N 281 LYS NZ N N N 282 LYS OXT O N N 283 LYS H H N N 284 LYS H2 H N N 285 LYS HA H N N 286 LYS HB2 H N N 287 LYS HB3 H N N 288 LYS HG2 H N N 289 LYS HG3 H N N 290 LYS HD2 H N N 291 LYS HD3 H N N 292 LYS HE2 H N N 293 LYS HE3 H N N 294 LYS HZ1 H N N 295 LYS HZ2 H N N 296 LYS HZ3 H N N 297 LYS HXT H N N 298 MET N N N N 299 MET CA C N S 300 MET C C N N 301 MET O O N N 302 MET CB C N N 303 MET CG C N N 304 MET SD S N N 305 MET CE C N N 306 MET OXT O N N 307 MET H H N N 308 MET H2 H N N 309 MET HA H N N 310 MET HB2 H N N 311 MET HB3 H N N 312 MET HG2 H N N 313 MET HG3 H N N 314 MET HE1 H N N 315 MET HE2 H N N 316 MET HE3 H N N 317 MET HXT H N N 318 PHE N N N N 319 PHE CA C N S 320 PHE C C N N 321 PHE O O N N 322 PHE CB C N N 323 PHE CG C Y N 324 PHE CD1 C Y N 325 PHE CD2 C Y N 326 PHE CE1 C Y N 327 PHE CE2 C Y N 328 PHE CZ C Y N 329 PHE OXT O N N 330 PHE H H N N 331 PHE H2 H N N 332 PHE HA H N N 333 PHE HB2 H N N 334 PHE HB3 H N N 335 PHE HD1 H N N 336 PHE HD2 H N N 337 PHE HE1 H N N 338 PHE HE2 H N N 339 PHE HZ H N N 340 PHE HXT H N N 341 PO4 P P N N 342 PO4 O1 O N N 343 PO4 O2 O N N 344 PO4 O3 O N N 345 PO4 O4 O N N 346 PRO N N N N 347 PRO CA C N S 348 PRO C C N N 349 PRO O O N N 350 PRO CB C N N 351 PRO CG C N N 352 PRO CD C N N 353 PRO OXT O N N 354 PRO H H N N 355 PRO HA H N N 356 PRO HB2 H N N 357 PRO HB3 H N N 358 PRO HG2 H N N 359 PRO HG3 H N N 360 PRO HD2 H N N 361 PRO HD3 H N N 362 PRO HXT H N N 363 SER N N N N 364 SER CA C N S 365 SER C C N N 366 SER O O N N 367 SER CB C N N 368 SER OG O N N 369 SER OXT O N N 370 SER H H N N 371 SER H2 H N N 372 SER HA H N N 373 SER HB2 H N N 374 SER HB3 H N N 375 SER HG H N N 376 SER HXT H N N 377 THR N N N N 378 THR CA C N S 379 THR C C N N 380 THR O O N N 381 THR CB C N R 382 THR OG1 O N N 383 THR CG2 C N N 384 THR OXT O N N 385 THR H H N N 386 THR H2 H N N 387 THR HA H N N 388 THR HB H N N 389 THR HG1 H N N 390 THR HG21 H N N 391 THR HG22 H N N 392 THR HG23 H N N 393 THR HXT H N N 394 TRP N N N N 395 TRP CA C N S 396 TRP C C N N 397 TRP O O N N 398 TRP CB C N N 399 TRP CG C Y N 400 TRP CD1 C Y N 401 TRP CD2 C Y N 402 TRP NE1 N Y N 403 TRP CE2 C Y N 404 TRP CE3 C Y N 405 TRP CZ2 C Y N 406 TRP CZ3 C Y N 407 TRP CH2 C Y N 408 TRP OXT O N N 409 TRP H H N N 410 TRP H2 H N N 411 TRP HA H N N 412 TRP HB2 H N N 413 TRP HB3 H N N 414 TRP HD1 H N N 415 TRP HE1 H N N 416 TRP HE3 H N N 417 TRP HZ2 H N N 418 TRP HZ3 H N N 419 TRP HH2 H N N 420 TRP HXT H N N 421 TYR N N N N 422 TYR CA C N S 423 TYR C C N N 424 TYR O O N N 425 TYR CB C N N 426 TYR CG C Y N 427 TYR CD1 C Y N 428 TYR CD2 C Y N 429 TYR CE1 C Y N 430 TYR CE2 C Y N 431 TYR CZ C Y N 432 TYR OH O N N 433 TYR OXT O N N 434 TYR H H N N 435 TYR H2 H N N 436 TYR HA H N N 437 TYR HB2 H N N 438 TYR HB3 H N N 439 TYR HD1 H N N 440 TYR HD2 H N N 441 TYR HE1 H N N 442 TYR HE2 H N N 443 TYR HH H N N 444 TYR HXT H N N 445 VAL N N N N 446 VAL CA C N S 447 VAL C C N N 448 VAL O O N N 449 VAL CB C N N 450 VAL CG1 C N N 451 VAL CG2 C N N 452 VAL OXT O N N 453 VAL H H N N 454 VAL H2 H N N 455 VAL HA H N N 456 VAL HB H N N 457 VAL HG11 H N N 458 VAL HG12 H N N 459 VAL HG13 H N N 460 VAL HG21 H N N 461 VAL HG22 H N N 462 VAL HG23 H N N 463 VAL HXT H N N 464 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8X7 C01 N02 sing N N 1 8X7 N02 C03 sing N N 2 8X7 N02 C07 sing N N 3 8X7 C03 C04 sing N N 4 8X7 C07 C06 sing N N 5 8X7 C04 N05 sing N N 6 8X7 C06 N05 sing N N 7 8X7 N05 C08 sing N N 8 8X7 C08 C37 doub Y N 9 8X7 C08 C09 sing Y N 10 8X7 C37 C36 sing Y N 11 8X7 C09 C10 doub Y N 12 8X7 C36 C11 doub Y N 13 8X7 C10 C11 sing Y N 14 8X7 C11 N12 sing N N 15 8X7 N12 C13 sing N N 16 8X7 C30 C29 doub Y N 17 8X7 C30 C31 sing Y N 18 8X7 C29 C28 sing Y N 19 8X7 C33 C32 sing N N 20 8X7 C13 N25 doub Y N 21 8X7 C13 N14 sing Y N 22 8X7 C31 C26 doub Y N 23 8X7 N25 C24 sing Y N 24 8X7 C28 C32 sing N N 25 8X7 C28 N27 doub Y N 26 8X7 O35 C32 sing N N 27 8X7 C32 C34 sing N N 28 8X7 N14 C15 doub Y N 29 8X7 C26 N27 sing Y N 30 8X7 C26 N23 sing N N 31 8X7 C24 N23 sing N N 32 8X7 C24 C16 doub Y N 33 8X7 N23 N19 sing N N 34 8X7 C15 C16 sing Y N 35 8X7 C16 C17 sing N N 36 8X7 N19 C17 sing N N 37 8X7 N19 C20 sing N N 38 8X7 C17 O18 doub N N 39 8X7 C20 C21 sing N N 40 8X7 C21 C22 doub N N 41 8X7 C01 H011 sing N N 42 8X7 C01 H013 sing N N 43 8X7 C01 H012 sing N N 44 8X7 C03 H031 sing N N 45 8X7 C03 H032 sing N N 46 8X7 C04 H041 sing N N 47 8X7 C04 H042 sing N N 48 8X7 C06 H061 sing N N 49 8X7 C06 H062 sing N N 50 8X7 C07 H072 sing N N 51 8X7 C07 H071 sing N N 52 8X7 C09 H091 sing N N 53 8X7 C10 H101 sing N N 54 8X7 N12 H121 sing N N 55 8X7 C15 H151 sing N N 56 8X7 C20 H202 sing N N 57 8X7 C20 H201 sing N N 58 8X7 C21 H211 sing N N 59 8X7 C22 H221 sing N N 60 8X7 C22 H222 sing N N 61 8X7 C29 H291 sing N N 62 8X7 C30 H301 sing N N 63 8X7 C31 H311 sing N N 64 8X7 C33 H331 sing N N 65 8X7 C33 H333 sing N N 66 8X7 C33 H332 sing N N 67 8X7 C34 H342 sing N N 68 8X7 C34 H341 sing N N 69 8X7 C34 H343 sing N N 70 8X7 O35 H351 sing N N 71 8X7 C36 H361 sing N N 72 8X7 C37 H371 sing N N 73 ALA N CA sing N N 74 ALA N H sing N N 75 ALA N H2 sing N N 76 ALA CA C sing N N 77 ALA CA CB sing N N 78 ALA CA HA sing N N 79 ALA C O doub N N 80 ALA C OXT sing N N 81 ALA CB HB1 sing N N 82 ALA CB HB2 sing N N 83 ALA CB HB3 sing N N 84 ALA OXT HXT sing N N 85 ARG N CA sing N N 86 ARG N H sing N N 87 ARG N H2 sing N N 88 ARG CA C sing N N 89 ARG CA CB sing N N 90 ARG CA HA sing N N 91 ARG C O doub N N 92 ARG C OXT sing N N 93 ARG CB CG sing N N 94 ARG CB HB2 sing N N 95 ARG CB HB3 sing N N 96 ARG CG CD sing N N 97 ARG CG HG2 sing N N 98 ARG CG HG3 sing N N 99 ARG CD NE sing N N 100 ARG CD HD2 sing N N 101 ARG CD HD3 sing N N 102 ARG NE CZ sing N N 103 ARG NE HE sing N N 104 ARG CZ NH1 sing N N 105 ARG CZ NH2 doub N N 106 ARG NH1 HH11 sing N N 107 ARG NH1 HH12 sing N N 108 ARG NH2 HH21 sing N N 109 ARG NH2 HH22 sing N N 110 ARG OXT HXT sing N N 111 ASN N CA sing N N 112 ASN N H sing N N 113 ASN N H2 sing N N 114 ASN CA C sing N N 115 ASN CA CB sing N N 116 ASN CA HA sing N N 117 ASN C O doub N N 118 ASN C OXT sing N N 119 ASN CB CG sing N N 120 ASN CB HB2 sing N N 121 ASN CB HB3 sing N N 122 ASN CG OD1 doub N N 123 ASN CG ND2 sing N N 124 ASN ND2 HD21 sing N N 125 ASN ND2 HD22 sing N N 126 ASN OXT HXT sing N N 127 ASP N CA sing N N 128 ASP N H sing N N 129 ASP N H2 sing N N 130 ASP CA C sing N N 131 ASP CA CB sing N N 132 ASP CA HA sing N N 133 ASP C O doub N N 134 ASP C OXT sing N N 135 ASP CB CG sing N N 136 ASP CB HB2 sing N N 137 ASP CB HB3 sing N N 138 ASP CG OD1 doub N N 139 ASP CG OD2 sing N N 140 ASP OD2 HD2 sing N N 141 ASP OXT HXT sing N N 142 CYS N CA sing N N 143 CYS N H sing N N 144 CYS N H2 sing N N 145 CYS CA C sing N N 146 CYS CA CB sing N N 147 CYS CA HA sing N N 148 CYS C O doub N N 149 CYS C OXT sing N N 150 CYS CB SG sing N N 151 CYS CB HB2 sing N N 152 CYS CB HB3 sing N N 153 CYS SG HG sing N N 154 CYS OXT HXT sing N N 155 GLN N CA sing N N 156 GLN N H sing N N 157 GLN N H2 sing N N 158 GLN CA C sing N N 159 GLN CA CB sing N N 160 GLN CA HA sing N N 161 GLN C O doub N N 162 GLN C OXT sing N N 163 GLN CB CG sing N N 164 GLN CB HB2 sing N N 165 GLN CB HB3 sing N N 166 GLN CG CD sing N N 167 GLN CG HG2 sing N N 168 GLN CG HG3 sing N N 169 GLN CD OE1 doub N N 170 GLN CD NE2 sing N N 171 GLN NE2 HE21 sing N N 172 GLN NE2 HE22 sing N N 173 GLN OXT HXT sing N N 174 GLU N CA sing N N 175 GLU N H sing N N 176 GLU N H2 sing N N 177 GLU CA C sing N N 178 GLU CA CB sing N N 179 GLU CA HA sing N N 180 GLU C O doub N N 181 GLU C OXT sing N N 182 GLU CB CG sing N N 183 GLU CB HB2 sing N N 184 GLU CB HB3 sing N N 185 GLU CG CD sing N N 186 GLU CG HG2 sing N N 187 GLU CG HG3 sing N N 188 GLU CD OE1 doub N N 189 GLU CD OE2 sing N N 190 GLU OE2 HE2 sing N N 191 GLU OXT HXT sing N N 192 GLY N CA sing N N 193 GLY N H sing N N 194 GLY N H2 sing N N 195 GLY CA C sing N N 196 GLY CA HA2 sing N N 197 GLY CA HA3 sing N N 198 GLY C O doub N N 199 GLY C OXT sing N N 200 GLY OXT HXT sing N N 201 HIS N CA sing N N 202 HIS N H sing N N 203 HIS N H2 sing N N 204 HIS CA C sing N N 205 HIS CA CB sing N N 206 HIS CA HA sing N N 207 HIS C O doub N N 208 HIS C OXT sing N N 209 HIS CB CG sing N N 210 HIS CB HB2 sing N N 211 HIS CB HB3 sing N N 212 HIS CG ND1 sing Y N 213 HIS CG CD2 doub Y N 214 HIS ND1 CE1 doub Y N 215 HIS ND1 HD1 sing N N 216 HIS CD2 NE2 sing Y N 217 HIS CD2 HD2 sing N N 218 HIS CE1 NE2 sing Y N 219 HIS CE1 HE1 sing N N 220 HIS NE2 HE2 sing N N 221 HIS OXT HXT sing N N 222 HOH O H1 sing N N 223 HOH O H2 sing N N 224 ILE N CA sing N N 225 ILE N H sing N N 226 ILE N H2 sing N N 227 ILE CA C sing N N 228 ILE CA CB sing N N 229 ILE CA HA sing N N 230 ILE C O doub N N 231 ILE C OXT sing N N 232 ILE CB CG1 sing N N 233 ILE CB CG2 sing N N 234 ILE CB HB sing N N 235 ILE CG1 CD1 sing N N 236 ILE CG1 HG12 sing N N 237 ILE CG1 HG13 sing N N 238 ILE CG2 HG21 sing N N 239 ILE CG2 HG22 sing N N 240 ILE CG2 HG23 sing N N 241 ILE CD1 HD11 sing N N 242 ILE CD1 HD12 sing N N 243 ILE CD1 HD13 sing N N 244 ILE OXT HXT sing N N 245 LEU N CA sing N N 246 LEU N H sing N N 247 LEU N H2 sing N N 248 LEU CA C sing N N 249 LEU CA CB sing N N 250 LEU CA HA sing N N 251 LEU C O doub N N 252 LEU C OXT sing N N 253 LEU CB CG sing N N 254 LEU CB HB2 sing N N 255 LEU CB HB3 sing N N 256 LEU CG CD1 sing N N 257 LEU CG CD2 sing N N 258 LEU CG HG sing N N 259 LEU CD1 HD11 sing N N 260 LEU CD1 HD12 sing N N 261 LEU CD1 HD13 sing N N 262 LEU CD2 HD21 sing N N 263 LEU CD2 HD22 sing N N 264 LEU CD2 HD23 sing N N 265 LEU OXT HXT sing N N 266 LYS N CA sing N N 267 LYS N H sing N N 268 LYS N H2 sing N N 269 LYS CA C sing N N 270 LYS CA CB sing N N 271 LYS CA HA sing N N 272 LYS C O doub N N 273 LYS C OXT sing N N 274 LYS CB CG sing N N 275 LYS CB HB2 sing N N 276 LYS CB HB3 sing N N 277 LYS CG CD sing N N 278 LYS CG HG2 sing N N 279 LYS CG HG3 sing N N 280 LYS CD CE sing N N 281 LYS CD HD2 sing N N 282 LYS CD HD3 sing N N 283 LYS CE NZ sing N N 284 LYS CE HE2 sing N N 285 LYS CE HE3 sing N N 286 LYS NZ HZ1 sing N N 287 LYS NZ HZ2 sing N N 288 LYS NZ HZ3 sing N N 289 LYS OXT HXT sing N N 290 MET N CA sing N N 291 MET N H sing N N 292 MET N H2 sing N N 293 MET CA C sing N N 294 MET CA CB sing N N 295 MET CA HA sing N N 296 MET C O doub N N 297 MET C OXT sing N N 298 MET CB CG sing N N 299 MET CB HB2 sing N N 300 MET CB HB3 sing N N 301 MET CG SD sing N N 302 MET CG HG2 sing N N 303 MET CG HG3 sing N N 304 MET SD CE sing N N 305 MET CE HE1 sing N N 306 MET CE HE2 sing N N 307 MET CE HE3 sing N N 308 MET OXT HXT sing N N 309 PHE N CA sing N N 310 PHE N H sing N N 311 PHE N H2 sing N N 312 PHE CA C sing N N 313 PHE CA CB sing N N 314 PHE CA HA sing N N 315 PHE C O doub N N 316 PHE C OXT sing N N 317 PHE CB CG sing N N 318 PHE CB HB2 sing N N 319 PHE CB HB3 sing N N 320 PHE CG CD1 doub Y N 321 PHE CG CD2 sing Y N 322 PHE CD1 CE1 sing Y N 323 PHE CD1 HD1 sing N N 324 PHE CD2 CE2 doub Y N 325 PHE CD2 HD2 sing N N 326 PHE CE1 CZ doub Y N 327 PHE CE1 HE1 sing N N 328 PHE CE2 CZ sing Y N 329 PHE CE2 HE2 sing N N 330 PHE CZ HZ sing N N 331 PHE OXT HXT sing N N 332 PO4 P O1 doub N N 333 PO4 P O2 sing N N 334 PO4 P O3 sing N N 335 PO4 P O4 sing N N 336 PRO N CA sing N N 337 PRO N CD sing N N 338 PRO N H sing N N 339 PRO CA C sing N N 340 PRO CA CB sing N N 341 PRO CA HA sing N N 342 PRO C O doub N N 343 PRO C OXT sing N N 344 PRO CB CG sing N N 345 PRO CB HB2 sing N N 346 PRO CB HB3 sing N N 347 PRO CG CD sing N N 348 PRO CG HG2 sing N N 349 PRO CG HG3 sing N N 350 PRO CD HD2 sing N N 351 PRO CD HD3 sing N N 352 PRO OXT HXT sing N N 353 SER N CA sing N N 354 SER N H sing N N 355 SER N H2 sing N N 356 SER CA C sing N N 357 SER CA CB sing N N 358 SER CA HA sing N N 359 SER C O doub N N 360 SER C OXT sing N N 361 SER CB OG sing N N 362 SER CB HB2 sing N N 363 SER CB HB3 sing N N 364 SER OG HG sing N N 365 SER OXT HXT sing N N 366 THR N CA sing N N 367 THR N H sing N N 368 THR N H2 sing N N 369 THR CA C sing N N 370 THR CA CB sing N N 371 THR CA HA sing N N 372 THR C O doub N N 373 THR C OXT sing N N 374 THR CB OG1 sing N N 375 THR CB CG2 sing N N 376 THR CB HB sing N N 377 THR OG1 HG1 sing N N 378 THR CG2 HG21 sing N N 379 THR CG2 HG22 sing N N 380 THR CG2 HG23 sing N N 381 THR OXT HXT sing N N 382 TRP N CA sing N N 383 TRP N H sing N N 384 TRP N H2 sing N N 385 TRP CA C sing N N 386 TRP CA CB sing N N 387 TRP CA HA sing N N 388 TRP C O doub N N 389 TRP C OXT sing N N 390 TRP CB CG sing N N 391 TRP CB HB2 sing N N 392 TRP CB HB3 sing N N 393 TRP CG CD1 doub Y N 394 TRP CG CD2 sing Y N 395 TRP CD1 NE1 sing Y N 396 TRP CD1 HD1 sing N N 397 TRP CD2 CE2 doub Y N 398 TRP CD2 CE3 sing Y N 399 TRP NE1 CE2 sing Y N 400 TRP NE1 HE1 sing N N 401 TRP CE2 CZ2 sing Y N 402 TRP CE3 CZ3 doub Y N 403 TRP CE3 HE3 sing N N 404 TRP CZ2 CH2 doub Y N 405 TRP CZ2 HZ2 sing N N 406 TRP CZ3 CH2 sing Y N 407 TRP CZ3 HZ3 sing N N 408 TRP CH2 HH2 sing N N 409 TRP OXT HXT sing N N 410 TYR N CA sing N N 411 TYR N H sing N N 412 TYR N H2 sing N N 413 TYR CA C sing N N 414 TYR CA CB sing N N 415 TYR CA HA sing N N 416 TYR C O doub N N 417 TYR C OXT sing N N 418 TYR CB CG sing N N 419 TYR CB HB2 sing N N 420 TYR CB HB3 sing N N 421 TYR CG CD1 doub Y N 422 TYR CG CD2 sing Y N 423 TYR CD1 CE1 sing Y N 424 TYR CD1 HD1 sing N N 425 TYR CD2 CE2 doub Y N 426 TYR CD2 HD2 sing N N 427 TYR CE1 CZ doub Y N 428 TYR CE1 HE1 sing N N 429 TYR CE2 CZ sing Y N 430 TYR CE2 HE2 sing N N 431 TYR CZ OH sing N N 432 TYR OH HH sing N N 433 TYR OXT HXT sing N N 434 VAL N CA sing N N 435 VAL N H sing N N 436 VAL N H2 sing N N 437 VAL CA C sing N N 438 VAL CA CB sing N N 439 VAL CA HA sing N N 440 VAL C O doub N N 441 VAL C OXT sing N N 442 VAL CB CG1 sing N N 443 VAL CB CG2 sing N N 444 VAL CB HB sing N N 445 VAL CG1 HG11 sing N N 446 VAL CG1 HG12 sing N N 447 VAL CG1 HG13 sing N N 448 VAL CG2 HG21 sing N N 449 VAL CG2 HG22 sing N N 450 VAL CG2 HG23 sing N N 451 VAL OXT HXT sing N N 452 # _pdbx_audit_support.funding_organization 'National Institutes of Health/Eunice Kennedy Shriver National Institute of Child Health & Human Development (NIH/NICHD)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 'UO1 HD076542' _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;1-[6-(2-hydroxypropan-2-yl)pyridin-2-yl]-6-{[4-(4-methylpiperazin-1-yl)phenyl]amino}-2-(prop-2-en-1-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one ; 8X7 3 'PHOSPHATE ION' PO4 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1X8B _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #