data_5VRW # _entry.id 5VRW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5VRW pdb_00005vrw 10.2210/pdb5vrw/pdb WWPDB D_1000227899 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 5VRX unspecified PDB . 5VRY unspecified PDB . 5VRZ unspecified PDB . 5VS0 unspecified PDB . 5VS1 unspecified PDB . 5VS2 unspecified PDB . 5VS3 unspecified PDB . 5VS4 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5VRW _pdbx_database_status.recvd_initial_deposition_date 2017-05-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Reed, A.J.' 1 ? 'Suo, Z.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Am. Chem. Soc.' _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 139 _citation.language ? _citation.page_first 9684 _citation.page_last 9690 _citation.title 'Time-Dependent Extension from an 8-Oxoguanine Lesion by Human DNA Polymerase Beta.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.7b05048 _citation.pdbx_database_id_PubMed 28682600 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Reed, A.J.' 1 ? primary 'Suo, Z.' 2 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 107.100 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5VRW _cell.details ? _cell.formula_units_Z ? _cell.length_a 50.700 _cell.length_a_esd ? _cell.length_b 79.500 _cell.length_b_esd ? _cell.length_c 55.300 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VRW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*CP*GP*AP*CP*AP*(8OG)P*GP*CP*GP*CP*AP*TP*CP*AP*G)-3') ; 4909.182 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3') ; 3020.979 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*GP*TP*CP*GP*G)-3') ; 1536.035 1 ? ? ? ? 4 polymer man 'DNA polymerase beta' 39070.543 1 2.7.7.7,4.2.99.- ? ? ? 5 non-polymer syn 'CALCIUM ION' 40.078 7 ? ? ? ? 6 non-polymer syn "THYMIDINE-5'-TRIPHOSPHATE" 482.168 1 ? ? ? ? 7 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 2 ? ? ? ? 8 water nat water 18.015 48 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DC)(DC)(DG)(DA)(DC)(DA)(8OG)(DG)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)' CCGACAGGCGCATCAG T ? 2 polydeoxyribonucleotide no no '(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DC)(DC)' CTGATGCGCC P ? 3 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ? 4 'polypeptide(L)' no no ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSEHHHHHH ; ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSEHHHHHH ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DG n 1 4 DA n 1 5 DC n 1 6 DA n 1 7 8OG n 1 8 DG n 1 9 DC n 1 10 DG n 1 11 DC n 1 12 DA n 1 13 DT n 1 14 DC n 1 15 DA n 1 16 DG n 2 1 DC n 2 2 DT n 2 3 DG n 2 4 DA n 2 5 DT n 2 6 DG n 2 7 DC n 2 8 DG n 2 9 DC n 2 10 DC n 3 1 DG n 3 2 DT n 3 3 DC n 3 4 DG n 3 5 DG n 4 1 MET n 4 2 SER n 4 3 LYS n 4 4 ARG n 4 5 LYS n 4 6 ALA n 4 7 PRO n 4 8 GLN n 4 9 GLU n 4 10 THR n 4 11 LEU n 4 12 ASN n 4 13 GLY n 4 14 GLY n 4 15 ILE n 4 16 THR n 4 17 ASP n 4 18 MET n 4 19 LEU n 4 20 THR n 4 21 GLU n 4 22 LEU n 4 23 ALA n 4 24 ASN n 4 25 PHE n 4 26 GLU n 4 27 LYS n 4 28 ASN n 4 29 VAL n 4 30 SER n 4 31 GLN n 4 32 ALA n 4 33 ILE n 4 34 HIS n 4 35 LYS n 4 36 TYR n 4 37 ASN n 4 38 ALA n 4 39 TYR n 4 40 ARG n 4 41 LYS n 4 42 ALA n 4 43 ALA n 4 44 SER n 4 45 VAL n 4 46 ILE n 4 47 ALA n 4 48 LYS n 4 49 TYR n 4 50 PRO n 4 51 HIS n 4 52 LYS n 4 53 ILE n 4 54 LYS n 4 55 SER n 4 56 GLY n 4 57 ALA n 4 58 GLU n 4 59 ALA n 4 60 LYS n 4 61 LYS n 4 62 LEU n 4 63 PRO n 4 64 GLY n 4 65 VAL n 4 66 GLY n 4 67 THR n 4 68 LYS n 4 69 ILE n 4 70 ALA n 4 71 GLU n 4 72 LYS n 4 73 ILE n 4 74 ASP n 4 75 GLU n 4 76 PHE n 4 77 LEU n 4 78 ALA n 4 79 THR n 4 80 GLY n 4 81 LYS n 4 82 LEU n 4 83 ARG n 4 84 LYS n 4 85 LEU n 4 86 GLU n 4 87 LYS n 4 88 ILE n 4 89 ARG n 4 90 GLN n 4 91 ASP n 4 92 ASP n 4 93 THR n 4 94 SER n 4 95 SER n 4 96 SER n 4 97 ILE n 4 98 ASN n 4 99 PHE n 4 100 LEU n 4 101 THR n 4 102 ARG n 4 103 VAL n 4 104 SER n 4 105 GLY n 4 106 ILE n 4 107 GLY n 4 108 PRO n 4 109 SER n 4 110 ALA n 4 111 ALA n 4 112 ARG n 4 113 LYS n 4 114 PHE n 4 115 VAL n 4 116 ASP n 4 117 GLU n 4 118 GLY n 4 119 ILE n 4 120 LYS n 4 121 THR n 4 122 LEU n 4 123 GLU n 4 124 ASP n 4 125 LEU n 4 126 ARG n 4 127 LYS n 4 128 ASN n 4 129 GLU n 4 130 ASP n 4 131 LYS n 4 132 LEU n 4 133 ASN n 4 134 HIS n 4 135 HIS n 4 136 GLN n 4 137 ARG n 4 138 ILE n 4 139 GLY n 4 140 LEU n 4 141 LYS n 4 142 TYR n 4 143 PHE n 4 144 GLY n 4 145 ASP n 4 146 PHE n 4 147 GLU n 4 148 LYS n 4 149 ARG n 4 150 ILE n 4 151 PRO n 4 152 ARG n 4 153 GLU n 4 154 GLU n 4 155 MET n 4 156 LEU n 4 157 GLN n 4 158 MET n 4 159 GLN n 4 160 ASP n 4 161 ILE n 4 162 VAL n 4 163 LEU n 4 164 ASN n 4 165 GLU n 4 166 VAL n 4 167 LYS n 4 168 LYS n 4 169 VAL n 4 170 ASP n 4 171 SER n 4 172 GLU n 4 173 TYR n 4 174 ILE n 4 175 ALA n 4 176 THR n 4 177 VAL n 4 178 CYS n 4 179 GLY n 4 180 SER n 4 181 PHE n 4 182 ARG n 4 183 ARG n 4 184 GLY n 4 185 ALA n 4 186 GLU n 4 187 SER n 4 188 SER n 4 189 GLY n 4 190 ASP n 4 191 MET n 4 192 ASP n 4 193 VAL n 4 194 LEU n 4 195 LEU n 4 196 THR n 4 197 HIS n 4 198 PRO n 4 199 SER n 4 200 PHE n 4 201 THR n 4 202 SER n 4 203 GLU n 4 204 SER n 4 205 THR n 4 206 LYS n 4 207 GLN n 4 208 PRO n 4 209 LYS n 4 210 LEU n 4 211 LEU n 4 212 HIS n 4 213 GLN n 4 214 VAL n 4 215 VAL n 4 216 GLU n 4 217 GLN n 4 218 LEU n 4 219 GLN n 4 220 LYS n 4 221 VAL n 4 222 HIS n 4 223 PHE n 4 224 ILE n 4 225 THR n 4 226 ASP n 4 227 THR n 4 228 LEU n 4 229 SER n 4 230 LYS n 4 231 GLY n 4 232 GLU n 4 233 THR n 4 234 LYS n 4 235 PHE n 4 236 MET n 4 237 GLY n 4 238 VAL n 4 239 CYS n 4 240 GLN n 4 241 LEU n 4 242 PRO n 4 243 SER n 4 244 LYS n 4 245 ASN n 4 246 ASP n 4 247 GLU n 4 248 LYS n 4 249 GLU n 4 250 TYR n 4 251 PRO n 4 252 HIS n 4 253 ARG n 4 254 ARG n 4 255 ILE n 4 256 ASP n 4 257 ILE n 4 258 ARG n 4 259 LEU n 4 260 ILE n 4 261 PRO n 4 262 LYS n 4 263 ASP n 4 264 GLN n 4 265 TYR n 4 266 TYR n 4 267 CYS n 4 268 GLY n 4 269 VAL n 4 270 LEU n 4 271 TYR n 4 272 PHE n 4 273 THR n 4 274 GLY n 4 275 SER n 4 276 ASP n 4 277 ILE n 4 278 PHE n 4 279 ASN n 4 280 LYS n 4 281 ASN n 4 282 MET n 4 283 ARG n 4 284 ALA n 4 285 HIS n 4 286 ALA n 4 287 LEU n 4 288 GLU n 4 289 LYS n 4 290 GLY n 4 291 PHE n 4 292 THR n 4 293 ILE n 4 294 ASN n 4 295 GLU n 4 296 TYR n 4 297 THR n 4 298 ILE n 4 299 ARG n 4 300 PRO n 4 301 LEU n 4 302 GLY n 4 303 VAL n 4 304 THR n 4 305 GLY n 4 306 VAL n 4 307 ALA n 4 308 GLY n 4 309 GLU n 4 310 PRO n 4 311 LEU n 4 312 PRO n 4 313 VAL n 4 314 ASP n 4 315 SER n 4 316 GLU n 4 317 LYS n 4 318 ASP n 4 319 ILE n 4 320 PHE n 4 321 ASP n 4 322 TYR n 4 323 ILE n 4 324 GLN n 4 325 TRP n 4 326 LYS n 4 327 TYR n 4 328 ARG n 4 329 GLU n 4 330 PRO n 4 331 LYS n 4 332 ASP n 4 333 ARG n 4 334 SER n 4 335 GLU n 4 336 HIS n 4 337 HIS n 4 338 HIS n 4 339 HIS n 4 340 HIS n 4 341 HIS n # _entity_src_gen.entity_id 4 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 341 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene POLB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 16 'synthetic construct' ? 32630 ? 2 1 sample 1 10 'synthetic construct' ? 32630 ? 3 1 sample 1 5 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 5VRW 5VRW ? 1 ? 1 2 PDB 5VRW 5VRW ? 2 ? 1 3 PDB 5VRW 5VRW ? 3 ? 1 4 UNP DPOLB_HUMAN P06746 ? 4 ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5VRW T 1 ? 16 ? 5VRW 1 ? 16 ? 1 16 2 2 5VRW P 1 ? 10 ? 5VRW 1 ? 10 ? 1 10 3 3 5VRW D 1 ? 5 ? 5VRW 1 ? 5 ? 1 5 4 4 5VRW A 1 ? 335 ? P06746 1 ? 335 ? 1 335 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 4 5VRW HIS A 336 ? UNP P06746 ? ? 'expression tag' 336 1 4 5VRW HIS A 337 ? UNP P06746 ? ? 'expression tag' 337 2 4 5VRW HIS A 338 ? UNP P06746 ? ? 'expression tag' 338 3 4 5VRW HIS A 339 ? UNP P06746 ? ? 'expression tag' 339 4 4 5VRW HIS A 340 ? UNP P06746 ? ? 'expression tag' 340 5 4 5VRW HIS A 341 ? UNP P06746 ? ? 'expression tag' 341 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 'C10 H14 N5 O8 P' 363.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TTP non-polymer . "THYMIDINE-5'-TRIPHOSPHATE" ? 'C10 H17 N2 O14 P3' 482.168 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5VRW _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.23 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 44.91 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '50 mM imidizole pH 7-7.5, 350 mM sodium acetate, 16-18 % PEG 3350' _exptl_crystal_grow.pdbx_pH_range 7.0-7.5 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX225HE' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-02-16 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97931 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 31-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97931 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 31-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 42.010 _reflns.entry_id 5VRW _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.580 _reflns.d_resolution_low 52.850 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 25529 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.000 _reflns.percent_possible_obs 98.000 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 1.975 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.460 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.945 _reflns.pdbx_scaling_rejects 5 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.091 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 50422 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.994 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.580 2.600 ? 2.020 ? ? ? ? 594 100.000 ? ? ? ? 0.406 ? ? ? ? ? ? ? ? 1.965 ? ? ? ? 0.557 ? ? 1 1 0.666 ? 2.600 2.800 ? 2.440 ? ? ? ? 5049 99.400 ? ? ? ? 0.341 ? ? ? ? ? ? ? ? 1.967 ? ? ? ? 0.466 ? ? 2 1 0.768 ? 2.800 3.000 ? 3.930 ? ? ? ? 3760 99.000 ? ? ? ? 0.211 ? ? ? ? ? ? ? ? 1.974 ? ? ? ? 0.289 ? ? 3 1 0.900 ? 3.000 4.000 ? 11.290 ? ? ? ? 9439 98.500 ? ? ? ? 0.070 ? ? ? ? ? ? ? ? 1.979 ? ? ? ? 0.096 ? ? 4 1 0.990 ? 4.000 6.000 ? 21.190 ? ? ? ? 4682 95.500 ? ? ? ? 0.036 ? ? ? ? ? ? ? ? 1.982 ? ? ? ? 0.050 ? ? 5 1 0.996 ? 6.000 7.000 ? 22.110 ? ? ? ? 765 98.800 ? ? ? ? 0.033 ? ? ? ? ? ? ? ? 1.983 ? ? ? ? 0.047 ? ? 6 1 0.996 ? 7.000 8.000 ? 28.490 ? ? ? ? 430 97.700 ? ? ? ? 0.021 ? ? ? ? ? ? ? ? 1.991 ? ? ? ? 0.029 ? ? 7 1 0.998 ? 8.000 10.000 ? 34.670 ? ? ? ? 414 98.100 ? ? ? ? 0.016 ? ? ? ? ? ? ? ? 1.978 ? ? ? ? 0.022 ? ? 8 1 0.999 ? 10.000 12.000 ? 41.060 ? ? ? ? 185 98.900 ? ? ? ? 0.013 ? ? ? ? ? ? ? ? 1.962 ? ? ? ? 0.018 ? ? 9 1 0.999 ? 12.000 52.850 ? 35.590 ? ? ? ? 211 80.500 ? ? ? ? 0.015 ? ? ? ? ? ? ? ? 1.820 ? ? ? ? 0.022 ? ? 10 1 0.999 ? # _refine.aniso_B[1][1] -0.0300 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.1000 _refine.aniso_B[2][2] -0.1300 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 0.0900 _refine.B_iso_max 88.600 _refine.B_iso_mean 35.8540 _refine.B_iso_min 14.470 _refine.correlation_coeff_Fo_to_Fc 0.9010 _refine.correlation_coeff_Fo_to_Fc_free 0.8020 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5VRW _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.5800 _refine.ls_d_res_low 52.8500 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12586 _refine.ls_number_reflns_R_free 663 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.5000 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2377 _refine.ls_R_factor_R_free 0.3060 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2342 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4RPX _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.4130 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 14.8360 _refine.overall_SU_ML 0.3190 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.5800 _refine_hist.d_res_low 52.8500 _refine_hist.pdbx_number_atoms_ligand 50 _refine_hist.number_atoms_solvent 48 _refine_hist.number_atoms_total 3303 _refine_hist.pdbx_number_residues_total 356 _refine_hist.pdbx_B_iso_mean_ligand 41.49 _refine_hist.pdbx_B_iso_mean_solvent 28.78 _refine_hist.pdbx_number_atoms_protein 2573 _refine_hist.pdbx_number_atoms_nucleic_acid 632 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 0.018 3395 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 2900 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 0.893 1.804 4713 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.783 3.000 6712 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 4.406 5.000 323 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 34.114 24.146 123 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 11.604 15.000 481 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 10.949 15.000 18 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.047 0.200 486 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 3349 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 762 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.5800 _refine_ls_shell.d_res_low 2.6470 _refine_ls_shell.number_reflns_all 983 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 49 _refine_ls_shell.number_reflns_R_work 934 _refine_ls_shell.percent_reflns_obs 99.9000 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3450 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.3010 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5VRW _struct.title 'Human DNA polymerase beta pre-catalytic 8-oxoG:dC extension complex with dTTP bound in non-planar conformation' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5VRW _struct_keywords.text 'polymerase, 8-oxoguanine, BER, transferase, lyase-dna complex' _struct_keywords.pdbx_keywords 'transferase, lyase/dna' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 6 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 5 ? M N N 7 ? N N N 7 ? O N N 8 ? P N N 8 ? Q N N 8 ? R N N 8 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN D 12 ? VAL D 29 ? ASN A 12 VAL A 29 1 ? 18 HELX_P HELX_P2 AA2 ALA D 32 ? TYR D 49 ? ALA A 32 TYR A 49 1 ? 18 HELX_P HELX_P3 AA3 SER D 55 ? LYS D 61 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 AA4 GLY D 66 ? GLY D 80 ? GLY A 66 GLY A 80 1 ? 15 HELX_P HELX_P5 AA5 LEU D 82 ? ASP D 91 ? LEU A 82 ASP A 91 1 ? 10 HELX_P HELX_P6 AA6 ASP D 91 ? THR D 101 ? ASP A 91 THR A 101 1 ? 11 HELX_P HELX_P7 AA7 GLY D 107 ? GLU D 117 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 AA8 THR D 121 ? ASN D 128 ? THR A 121 ASN A 128 1 ? 8 HELX_P HELX_P9 AA9 GLU D 129 ? LEU D 132 ? GLU A 129 LEU A 132 5 ? 4 HELX_P HELX_P10 AB1 ASN D 133 ? TYR D 142 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 AB2 TYR D 142 ? LYS D 148 ? TYR A 142 LYS A 148 1 ? 7 HELX_P HELX_P12 AB3 ARG D 152 ? ASP D 170 ? ARG A 152 ASP A 170 1 ? 19 HELX_P HELX_P13 AB4 CYS D 178 ? ARG D 183 ? CYS A 178 ARG A 183 1 ? 6 HELX_P HELX_P14 AB5 LYS D 209 ? VAL D 221 ? LYS A 209 VAL A 221 1 ? 13 HELX_P HELX_P15 AB6 PRO D 261 ? ASP D 263 ? PRO A 261 ASP A 263 5 ? 3 HELX_P HELX_P16 AB7 GLN D 264 ? GLY D 274 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P17 AB8 SER D 275 ? LYS D 289 ? SER A 275 LYS A 289 1 ? 15 HELX_P HELX_P18 AB9 SER D 315 ? ILE D 323 ? SER A 315 ILE A 323 1 ? 9 HELX_P HELX_P19 AC1 GLU D 329 ? SER D 334 ? GLU A 329 SER A 334 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DA 6 "O3'" ? ? ? 1_555 A 8OG 7 P ? ? T DA 6 T 8OG 7 1_555 ? ? ? ? ? ? ? 1.595 ? ? covale2 covale both ? A 8OG 7 "O3'" ? ? ? 1_555 A DG 8 P ? ? T 8OG 7 T DG 8 1_555 ? ? ? ? ? ? ? 1.599 ? ? metalc1 metalc ? ? B DC 9 OP1 ? ? ? 1_555 F CA . CA ? ? P DC 9 P CA 102 1_555 ? ? ? ? ? ? ? 2.189 ? ? metalc2 metalc ? ? B DC 9 OP2 ? ? ? 1_555 F CA . CA ? ? P DC 9 P CA 102 1_555 ? ? ? ? ? ? ? 2.898 ? ? metalc3 metalc ? ? B DC 10 "O3'" ? ? ? 1_555 E CA . CA ? ? P DC 10 P CA 101 1_555 ? ? ? ? ? ? ? 2.378 ? ? metalc4 metalc ? ? E CA . CA ? ? ? 1_555 G TTP . O2A ? ? P CA 101 P TTP 103 1_555 ? ? ? ? ? ? ? 2.603 ? ? metalc5 metalc ? ? E CA . CA ? ? ? 1_555 D ASP 190 OD1 ? ? P CA 101 A ASP 190 1_555 ? ? ? ? ? ? ? 3.194 ? ? metalc6 metalc ? ? E CA . CA ? ? ? 1_555 D ASP 190 OD2 ? ? P CA 101 A ASP 190 1_555 ? ? ? ? ? ? ? 2.324 ? ? metalc7 metalc ? ? E CA . CA ? ? ? 1_555 D ASP 192 OD1 ? ? P CA 101 A ASP 192 1_555 ? ? ? ? ? ? ? 2.395 ? ? metalc8 metalc ? ? E CA . CA ? ? ? 1_555 D ASP 256 OD2 ? ? P CA 101 A ASP 256 1_555 ? ? ? ? ? ? ? 2.434 ? ? metalc9 metalc ? ? F CA . CA ? ? ? 1_555 P HOH . O ? ? P CA 102 P HOH 201 1_555 ? ? ? ? ? ? ? 2.391 ? ? metalc10 metalc ? ? F CA . CA ? ? ? 1_555 D THR 101 O ? ? P CA 102 A THR 101 1_555 ? ? ? ? ? ? ? 2.282 ? ? metalc11 metalc ? ? F CA . CA ? ? ? 1_555 D VAL 103 O ? ? P CA 102 A VAL 103 1_555 ? ? ? ? ? ? ? 2.699 ? ? metalc12 metalc ? ? F CA . CA ? ? ? 1_555 D ILE 106 O ? ? P CA 102 A ILE 106 1_555 ? ? ? ? ? ? ? 2.785 ? ? metalc13 metalc ? ? G TTP . O2A ? ? ? 1_555 I CA . CA ? ? P TTP 103 A CA 401 1_555 ? ? ? ? ? ? ? 2.281 ? ? metalc14 metalc ? ? G TTP . O2B ? ? ? 1_555 I CA . CA ? ? P TTP 103 A CA 401 1_555 ? ? ? ? ? ? ? 2.216 ? ? metalc15 metalc ? ? G TTP . O2G ? ? ? 1_555 I CA . CA ? ? P TTP 103 A CA 401 1_555 ? ? ? ? ? ? ? 2.495 ? ? metalc16 metalc ? ? C DC 3 OP1 ? ? ? 1_555 H CA . CA ? ? D DC 3 D CA 101 1_555 ? ? ? ? ? ? ? 2.587 ? ? metalc17 metalc ? ? H CA . CA ? ? ? 1_555 Q HOH . O ? ? D CA 101 D HOH 202 1_555 ? ? ? ? ? ? ? 3.040 ? ? metalc18 metalc ? ? H CA . CA ? ? ? 1_555 D LYS 60 O ? ? D CA 101 A LYS 60 1_555 ? ? ? ? ? ? ? 2.425 ? ? metalc19 metalc ? ? H CA . CA ? ? ? 1_555 D LEU 62 O ? ? D CA 101 A LEU 62 1_555 ? ? ? ? ? ? ? 2.756 ? ? metalc20 metalc ? ? H CA . CA ? ? ? 1_555 D VAL 65 O ? ? D CA 101 A VAL 65 1_555 ? ? ? ? ? ? ? 2.890 ? ? metalc21 metalc ? ? D ASP 190 OD1 ? ? ? 1_555 I CA . CA ? ? A ASP 190 A CA 401 1_555 ? ? ? ? ? ? ? 2.371 ? ? metalc22 metalc ? ? D ASP 192 OD2 ? ? ? 1_555 I CA . CA ? ? A ASP 192 A CA 401 1_555 ? ? ? ? ? ? ? 2.482 ? ? metalc23 metalc ? ? D GLU 249 OE1 ? ? ? 1_555 K CA . CA ? ? A GLU 249 A CA 403 1_555 ? ? ? ? ? ? ? 3.001 ? ? metalc24 metalc ? ? D GLU 249 OE2 ? ? ? 1_555 K CA . CA ? ? A GLU 249 A CA 403 1_555 ? ? ? ? ? ? ? 2.865 ? ? metalc25 metalc ? ? D ASP 314 OD1 ? ? ? 1_555 J CA . CA ? ? A ASP 314 A CA 402 1_555 ? ? ? ? ? ? ? 2.816 ? ? metalc26 metalc ? ? D ASP 318 OD1 ? ? ? 1_555 J CA . CA ? ? A ASP 318 A CA 402 1_555 ? ? ? ? ? ? ? 2.758 ? ? metalc27 metalc ? ? D GLU 335 O ? ? ? 1_555 L CA . CA ? ? A GLU 335 A CA 404 1_555 ? ? ? ? ? ? ? 2.923 ? ? metalc28 metalc ? ? J CA . CA ? ? ? 1_555 R HOH . O ? ? A CA 402 A HOH 537 1_555 ? ? ? ? ? ? ? 3.197 ? ? metalc29 metalc ? ? K CA . CA ? ? ? 1_555 R HOH . O ? ? A CA 403 A HOH 535 1_556 ? ? ? ? ? ? ? 2.603 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 C DG 5 N1 B ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 C DG 5 O6 B ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 C DG 5 N2 B ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 C DG 4 N1 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 C DG 4 O6 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 C DG 4 N2 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 C DC 3 N3 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 C DC 3 O2 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 C DC 3 N4 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N1 ? ? ? 1_555 C DT 2 N3 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 4 N6 ? ? ? 1_555 C DT 2 O4 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N3 ? ? ? 1_555 C DG 1 N1 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N4 ? ? ? 1_555 C DG 1 O6 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 O2 ? ? ? 1_555 C DG 1 N2 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A 8OG 7 N1 ? ? ? 1_555 B DC 10 N3 ? ? T 8OG 7 P DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A 8OG 7 N2 ? ? ? 1_555 B DC 10 O2 ? ? T 8OG 7 P DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A 8OG 7 O6 ? ? ? 1_555 B DC 10 N4 ? ? T 8OG 7 P DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 9 N3 ? ? T DG 8 P DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 9 O2 ? ? T DG 8 P DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 9 N4 ? ? T DG 8 P DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 8 N1 ? ? T DC 9 P DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 8 O6 ? ? T DC 9 P DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 8 N2 ? ? T DC 9 P DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 7 N3 ? ? T DG 10 P DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 7 O2 ? ? T DG 10 P DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 7 N4 ? ? T DG 10 P DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 6 N1 ? ? T DC 11 P DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 6 O6 ? ? T DC 11 P DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 6 N2 ? ? T DC 11 P DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DA 12 N1 ? ? ? 1_555 B DT 5 N3 ? ? T DA 12 P DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DA 12 N6 ? ? ? 1_555 B DT 5 O4 ? ? T DA 12 P DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DT 13 N3 ? ? ? 1_555 B DA 4 N1 ? ? T DT 13 P DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DT 13 O4 ? ? ? 1_555 B DA 4 N6 ? ? T DT 13 P DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 14 N3 ? ? ? 1_555 B DG 3 N1 ? ? T DC 14 P DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 14 N4 ? ? ? 1_555 B DG 3 O6 ? ? T DC 14 P DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 14 O2 ? ? ? 1_555 B DG 3 N2 ? ? T DC 14 P DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DA 15 N1 ? ? ? 1_555 B DT 2 N3 ? ? T DA 15 P DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DA 15 N6 ? ? ? 1_555 B DT 2 O4 ? ? T DA 15 P DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DG 16 N1 ? ? ? 1_555 B DC 1 N3 ? ? T DG 16 P DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DG 16 N2 ? ? ? 1_555 B DC 1 O2 ? ? T DG 16 P DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DG 16 O6 ? ? ? 1_555 B DC 1 N4 ? ? T DG 16 P DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 274 _struct_mon_prot_cis.label_asym_id D _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 274 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 275 _struct_mon_prot_cis.pdbx_label_asym_id_2 D _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 275 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.80 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 5 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE D 150 ? PRO D 151 ? ILE A 150 PRO A 151 AA1 2 SER D 187 ? SER D 188 ? SER A 187 SER A 188 AA2 1 ILE D 174 ? VAL D 177 ? ILE A 174 VAL A 177 AA2 2 MET D 191 ? THR D 196 ? MET A 191 THR A 196 AA2 3 ARG D 253 ? LEU D 259 ? ARG A 253 LEU A 259 AA2 4 LYS D 234 ? CYS D 239 ? LYS A 234 CYS A 239 AA2 5 ILE D 224 ? LYS D 230 ? ILE A 224 LYS A 230 AA3 1 PHE D 291 ? ILE D 293 ? PHE A 291 ILE A 293 AA3 2 ILE D 298 ? PRO D 300 ? ILE A 298 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE D 150 ? N ILE A 150 O SER D 188 ? O SER A 188 AA2 1 2 N THR D 176 ? N THR A 176 O LEU D 194 ? O LEU A 194 AA2 2 3 N VAL D 193 ? N VAL A 193 O ASP D 256 ? O ASP A 256 AA2 3 4 O ILE D 257 ? O ILE A 257 N PHE D 235 ? N PHE A 235 AA2 4 5 O MET D 236 ? O MET A 236 N SER D 229 ? N SER A 229 AA3 1 2 N THR D 292 ? N THR A 292 O ARG D 299 ? O ARG A 299 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software P CA 101 ? 5 'binding site for residue CA P 101' AC2 Software P CA 102 ? 5 'binding site for residue CA P 102' AC3 Software P TTP 103 ? 18 'binding site for residue TTP P 103' AC4 Software D CA 101 ? 5 'binding site for residue CA D 101' AC5 Software A CA 401 ? 3 'binding site for residue CA A 401' AC6 Software A CA 402 ? 2 'binding site for residue CA A 402' AC7 Software A CA 403 ? 2 'binding site for residue CA A 403' AC8 Software A CA 404 ? 1 'binding site for residue CA A 404' AC9 Software A PEG 405 ? 5 'binding site for residue PEG A 405' AD1 Software A PEG 406 ? 1 'binding site for residue PEG A 406' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP D 190 ? ASP A 190 . ? 1_555 ? 2 AC1 5 ASP D 192 ? ASP A 192 . ? 1_555 ? 3 AC1 5 ASP D 256 ? ASP A 256 . ? 1_555 ? 4 AC1 5 DC B 10 ? DC P 10 . ? 1_555 ? 5 AC1 5 TTP G . ? TTP P 103 . ? 1_555 ? 6 AC2 5 THR D 101 ? THR A 101 . ? 1_555 ? 7 AC2 5 VAL D 103 ? VAL A 103 . ? 1_555 ? 8 AC2 5 ILE D 106 ? ILE A 106 . ? 1_555 ? 9 AC2 5 DC B 9 ? DC P 9 . ? 1_555 ? 10 AC2 5 HOH P . ? HOH P 201 . ? 1_555 ? 11 AC3 18 ARG D 149 ? ARG A 149 . ? 1_555 ? 12 AC3 18 GLY D 179 ? GLY A 179 . ? 1_555 ? 13 AC3 18 SER D 180 ? SER A 180 . ? 1_555 ? 14 AC3 18 ARG D 183 ? ARG A 183 . ? 1_555 ? 15 AC3 18 SER D 188 ? SER A 188 . ? 1_555 ? 16 AC3 18 GLY D 189 ? GLY A 189 . ? 1_555 ? 17 AC3 18 ASP D 190 ? ASP A 190 . ? 1_555 ? 18 AC3 18 ASP D 192 ? ASP A 192 . ? 1_555 ? 19 AC3 18 TYR D 271 ? TYR A 271 . ? 1_555 ? 20 AC3 18 PHE D 272 ? PHE A 272 . ? 1_555 ? 21 AC3 18 THR D 273 ? THR A 273 . ? 1_555 ? 22 AC3 18 GLY D 274 ? GLY A 274 . ? 1_555 ? 23 AC3 18 ASP D 276 ? ASP A 276 . ? 1_555 ? 24 AC3 18 ASN D 279 ? ASN A 279 . ? 1_555 ? 25 AC3 18 CA I . ? CA A 401 . ? 1_555 ? 26 AC3 18 DC B 10 ? DC P 10 . ? 1_555 ? 27 AC3 18 CA E . ? CA P 101 . ? 1_555 ? 28 AC3 18 DA A 6 ? DA T 6 . ? 1_555 ? 29 AC4 5 LYS D 60 ? LYS A 60 . ? 1_555 ? 30 AC4 5 LEU D 62 ? LEU A 62 . ? 1_555 ? 31 AC4 5 VAL D 65 ? VAL A 65 . ? 1_555 ? 32 AC4 5 DC C 3 ? DC D 3 . ? 1_555 ? 33 AC4 5 HOH Q . ? HOH D 202 . ? 1_555 ? 34 AC5 3 ASP D 190 ? ASP A 190 . ? 1_555 ? 35 AC5 3 ASP D 192 ? ASP A 192 . ? 1_555 ? 36 AC5 3 TTP G . ? TTP P 103 . ? 1_555 ? 37 AC6 2 ASP D 314 ? ASP A 314 . ? 1_555 ? 38 AC6 2 ASP D 318 ? ASP A 318 . ? 1_555 ? 39 AC7 2 GLU D 249 ? GLU A 249 . ? 1_555 ? 40 AC7 2 HOH R . ? HOH A 535 . ? 1_556 ? 41 AC8 1 GLU D 335 ? GLU A 335 . ? 1_555 ? 42 AC9 5 ILE D 174 ? ILE A 174 . ? 1_555 ? 43 AC9 5 THR D 176 ? THR A 176 . ? 1_555 ? 44 AC9 5 THR D 196 ? THR A 196 . ? 1_555 ? 45 AC9 5 TYR D 265 ? TYR A 265 . ? 1_555 ? 46 AC9 5 DC A 2 ? DC T 2 . ? 1_455 ? 47 AD1 1 GLU D 9 ? GLU A 9 . ? 1_555 ? # _atom_sites.entry_id 5VRW _atom_sites.fract_transf_matrix[1][1] 0.019724 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006068 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012579 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018920 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CA N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC T . n A 1 2 DC 2 2 2 DC DC T . n A 1 3 DG 3 3 3 DG DG T . n A 1 4 DA 4 4 4 DA DA T . n A 1 5 DC 5 5 5 DC DC T . n A 1 6 DA 6 6 6 DA DA T . n A 1 7 8OG 7 7 7 8OG 8OG T . n A 1 8 DG 8 8 8 DG DG T . n A 1 9 DC 9 9 9 DC DC T . n A 1 10 DG 10 10 10 DG DG T . n A 1 11 DC 11 11 11 DC DC T . n A 1 12 DA 12 12 12 DA DA T . n A 1 13 DT 13 13 13 DT DT T . n A 1 14 DC 14 14 14 DC DC T . n A 1 15 DA 15 15 15 DA DA T . n A 1 16 DG 16 16 16 DG DG T . n B 2 1 DC 1 1 1 DC DC P . n B 2 2 DT 2 2 2 DT DT P . n B 2 3 DG 3 3 3 DG DG P . n B 2 4 DA 4 4 4 DA DA P . n B 2 5 DT 5 5 5 DT DT P . n B 2 6 DG 6 6 6 DG DG P . n B 2 7 DC 7 7 7 DC DC P . n B 2 8 DG 8 8 8 DG DG P . n B 2 9 DC 9 9 9 DC DC P . n B 2 10 DC 10 10 10 DC DC P . n C 3 1 DG 1 1 1 DG DG D . n C 3 2 DT 2 2 2 DT DT D . n C 3 3 DC 3 3 3 DC DC D . n C 3 4 DG 4 4 4 DG DG D . n C 3 5 DG 5 5 5 DG DG D . n D 4 1 MET 1 1 ? ? ? A . n D 4 2 SER 2 2 ? ? ? A . n D 4 3 LYS 3 3 ? ? ? A . n D 4 4 ARG 4 4 ? ? ? A . n D 4 5 LYS 5 5 ? ? ? A . n D 4 6 ALA 6 6 ? ? ? A . n D 4 7 PRO 7 7 ? ? ? A . n D 4 8 GLN 8 8 ? ? ? A . n D 4 9 GLU 9 9 9 GLU GLU A . n D 4 10 THR 10 10 10 THR THR A . n D 4 11 LEU 11 11 11 LEU LEU A . n D 4 12 ASN 12 12 12 ASN ASN A . n D 4 13 GLY 13 13 13 GLY GLY A . n D 4 14 GLY 14 14 14 GLY GLY A . n D 4 15 ILE 15 15 15 ILE ILE A . n D 4 16 THR 16 16 16 THR THR A . n D 4 17 ASP 17 17 17 ASP ASP A . n D 4 18 MET 18 18 18 MET MET A . n D 4 19 LEU 19 19 19 LEU LEU A . n D 4 20 THR 20 20 20 THR THR A . n D 4 21 GLU 21 21 21 GLU GLU A . n D 4 22 LEU 22 22 22 LEU LEU A . n D 4 23 ALA 23 23 23 ALA ALA A . n D 4 24 ASN 24 24 24 ASN ASN A . n D 4 25 PHE 25 25 25 PHE PHE A . n D 4 26 GLU 26 26 26 GLU GLU A . n D 4 27 LYS 27 27 27 LYS LYS A . n D 4 28 ASN 28 28 28 ASN ASN A . n D 4 29 VAL 29 29 29 VAL VAL A . n D 4 30 SER 30 30 30 SER SER A . n D 4 31 GLN 31 31 31 GLN GLN A . n D 4 32 ALA 32 32 32 ALA ALA A . n D 4 33 ILE 33 33 33 ILE ILE A . n D 4 34 HIS 34 34 34 HIS HIS A . n D 4 35 LYS 35 35 35 LYS LYS A . n D 4 36 TYR 36 36 36 TYR TYR A . n D 4 37 ASN 37 37 37 ASN ASN A . n D 4 38 ALA 38 38 38 ALA ALA A . n D 4 39 TYR 39 39 39 TYR TYR A . n D 4 40 ARG 40 40 40 ARG ARG A . n D 4 41 LYS 41 41 41 LYS LYS A . n D 4 42 ALA 42 42 42 ALA ALA A . n D 4 43 ALA 43 43 43 ALA ALA A . n D 4 44 SER 44 44 44 SER SER A . n D 4 45 VAL 45 45 45 VAL VAL A . n D 4 46 ILE 46 46 46 ILE ILE A . n D 4 47 ALA 47 47 47 ALA ALA A . n D 4 48 LYS 48 48 48 LYS LYS A . n D 4 49 TYR 49 49 49 TYR TYR A . n D 4 50 PRO 50 50 50 PRO PRO A . n D 4 51 HIS 51 51 51 HIS HIS A . n D 4 52 LYS 52 52 52 LYS LYS A . n D 4 53 ILE 53 53 53 ILE ILE A . n D 4 54 LYS 54 54 54 LYS LYS A . n D 4 55 SER 55 55 55 SER SER A . n D 4 56 GLY 56 56 56 GLY GLY A . n D 4 57 ALA 57 57 57 ALA ALA A . n D 4 58 GLU 58 58 58 GLU GLU A . n D 4 59 ALA 59 59 59 ALA ALA A . n D 4 60 LYS 60 60 60 LYS LYS A . n D 4 61 LYS 61 61 61 LYS LYS A . n D 4 62 LEU 62 62 62 LEU LEU A . n D 4 63 PRO 63 63 63 PRO PRO A . n D 4 64 GLY 64 64 64 GLY GLY A . n D 4 65 VAL 65 65 65 VAL VAL A . n D 4 66 GLY 66 66 66 GLY GLY A . n D 4 67 THR 67 67 67 THR THR A . n D 4 68 LYS 68 68 68 LYS LYS A . n D 4 69 ILE 69 69 69 ILE ILE A . n D 4 70 ALA 70 70 70 ALA ALA A . n D 4 71 GLU 71 71 71 GLU GLU A . n D 4 72 LYS 72 72 72 LYS LYS A . n D 4 73 ILE 73 73 73 ILE ILE A . n D 4 74 ASP 74 74 74 ASP ASP A . n D 4 75 GLU 75 75 75 GLU GLU A . n D 4 76 PHE 76 76 76 PHE PHE A . n D 4 77 LEU 77 77 77 LEU LEU A . n D 4 78 ALA 78 78 78 ALA ALA A . n D 4 79 THR 79 79 79 THR THR A . n D 4 80 GLY 80 80 80 GLY GLY A . n D 4 81 LYS 81 81 81 LYS LYS A . n D 4 82 LEU 82 82 82 LEU LEU A . n D 4 83 ARG 83 83 83 ARG ARG A . n D 4 84 LYS 84 84 84 LYS LYS A . n D 4 85 LEU 85 85 85 LEU LEU A . n D 4 86 GLU 86 86 86 GLU GLU A . n D 4 87 LYS 87 87 87 LYS LYS A . n D 4 88 ILE 88 88 88 ILE ILE A . n D 4 89 ARG 89 89 89 ARG ARG A . n D 4 90 GLN 90 90 90 GLN GLN A . n D 4 91 ASP 91 91 91 ASP ASP A . n D 4 92 ASP 92 92 92 ASP ASP A . n D 4 93 THR 93 93 93 THR THR A . n D 4 94 SER 94 94 94 SER SER A . n D 4 95 SER 95 95 95 SER SER A . n D 4 96 SER 96 96 96 SER SER A . n D 4 97 ILE 97 97 97 ILE ILE A . n D 4 98 ASN 98 98 98 ASN ASN A . n D 4 99 PHE 99 99 99 PHE PHE A . n D 4 100 LEU 100 100 100 LEU LEU A . n D 4 101 THR 101 101 101 THR THR A . n D 4 102 ARG 102 102 102 ARG ARG A . n D 4 103 VAL 103 103 103 VAL VAL A . n D 4 104 SER 104 104 104 SER SER A . n D 4 105 GLY 105 105 105 GLY GLY A . n D 4 106 ILE 106 106 106 ILE ILE A . n D 4 107 GLY 107 107 107 GLY GLY A . n D 4 108 PRO 108 108 108 PRO PRO A . n D 4 109 SER 109 109 109 SER SER A . n D 4 110 ALA 110 110 110 ALA ALA A . n D 4 111 ALA 111 111 111 ALA ALA A . n D 4 112 ARG 112 112 112 ARG ARG A . n D 4 113 LYS 113 113 113 LYS LYS A . n D 4 114 PHE 114 114 114 PHE PHE A . n D 4 115 VAL 115 115 115 VAL VAL A . n D 4 116 ASP 116 116 116 ASP ASP A . n D 4 117 GLU 117 117 117 GLU GLU A . n D 4 118 GLY 118 118 118 GLY GLY A . n D 4 119 ILE 119 119 119 ILE ILE A . n D 4 120 LYS 120 120 120 LYS LYS A . n D 4 121 THR 121 121 121 THR THR A . n D 4 122 LEU 122 122 122 LEU LEU A . n D 4 123 GLU 123 123 123 GLU GLU A . n D 4 124 ASP 124 124 124 ASP ASP A . n D 4 125 LEU 125 125 125 LEU LEU A . n D 4 126 ARG 126 126 126 ARG ARG A . n D 4 127 LYS 127 127 127 LYS LYS A . n D 4 128 ASN 128 128 128 ASN ASN A . n D 4 129 GLU 129 129 129 GLU GLU A . n D 4 130 ASP 130 130 130 ASP ASP A . n D 4 131 LYS 131 131 131 LYS LYS A . n D 4 132 LEU 132 132 132 LEU LEU A . n D 4 133 ASN 133 133 133 ASN ASN A . n D 4 134 HIS 134 134 134 HIS HIS A . n D 4 135 HIS 135 135 135 HIS HIS A . n D 4 136 GLN 136 136 136 GLN GLN A . n D 4 137 ARG 137 137 137 ARG ARG A . n D 4 138 ILE 138 138 138 ILE ILE A . n D 4 139 GLY 139 139 139 GLY GLY A . n D 4 140 LEU 140 140 140 LEU LEU A . n D 4 141 LYS 141 141 141 LYS LYS A . n D 4 142 TYR 142 142 142 TYR TYR A . n D 4 143 PHE 143 143 143 PHE PHE A . n D 4 144 GLY 144 144 144 GLY GLY A . n D 4 145 ASP 145 145 145 ASP ASP A . n D 4 146 PHE 146 146 146 PHE PHE A . n D 4 147 GLU 147 147 147 GLU GLU A . n D 4 148 LYS 148 148 148 LYS LYS A . n D 4 149 ARG 149 149 149 ARG ARG A . n D 4 150 ILE 150 150 150 ILE ILE A . n D 4 151 PRO 151 151 151 PRO PRO A . n D 4 152 ARG 152 152 152 ARG ARG A . n D 4 153 GLU 153 153 153 GLU GLU A . n D 4 154 GLU 154 154 154 GLU GLU A . n D 4 155 MET 155 155 155 MET MET A . n D 4 156 LEU 156 156 156 LEU LEU A . n D 4 157 GLN 157 157 157 GLN GLN A . n D 4 158 MET 158 158 158 MET MET A . n D 4 159 GLN 159 159 159 GLN GLN A . n D 4 160 ASP 160 160 160 ASP ASP A . n D 4 161 ILE 161 161 161 ILE ILE A . n D 4 162 VAL 162 162 162 VAL VAL A . n D 4 163 LEU 163 163 163 LEU LEU A . n D 4 164 ASN 164 164 164 ASN ASN A . n D 4 165 GLU 165 165 165 GLU GLU A . n D 4 166 VAL 166 166 166 VAL VAL A . n D 4 167 LYS 167 167 167 LYS LYS A . n D 4 168 LYS 168 168 168 LYS LYS A . n D 4 169 VAL 169 169 169 VAL VAL A . n D 4 170 ASP 170 170 170 ASP ASP A . n D 4 171 SER 171 171 171 SER SER A . n D 4 172 GLU 172 172 172 GLU GLU A . n D 4 173 TYR 173 173 173 TYR TYR A . n D 4 174 ILE 174 174 174 ILE ILE A . n D 4 175 ALA 175 175 175 ALA ALA A . n D 4 176 THR 176 176 176 THR THR A . n D 4 177 VAL 177 177 177 VAL VAL A . n D 4 178 CYS 178 178 178 CYS CYS A . n D 4 179 GLY 179 179 179 GLY GLY A . n D 4 180 SER 180 180 180 SER SER A . n D 4 181 PHE 181 181 181 PHE PHE A . n D 4 182 ARG 182 182 182 ARG ARG A . n D 4 183 ARG 183 183 183 ARG ARG A . n D 4 184 GLY 184 184 184 GLY GLY A . n D 4 185 ALA 185 185 185 ALA ALA A . n D 4 186 GLU 186 186 186 GLU GLU A . n D 4 187 SER 187 187 187 SER SER A . n D 4 188 SER 188 188 188 SER SER A . n D 4 189 GLY 189 189 189 GLY GLY A . n D 4 190 ASP 190 190 190 ASP ASP A . n D 4 191 MET 191 191 191 MET MET A . n D 4 192 ASP 192 192 192 ASP ASP A . n D 4 193 VAL 193 193 193 VAL VAL A . n D 4 194 LEU 194 194 194 LEU LEU A . n D 4 195 LEU 195 195 195 LEU LEU A . n D 4 196 THR 196 196 196 THR THR A . n D 4 197 HIS 197 197 197 HIS HIS A . n D 4 198 PRO 198 198 198 PRO PRO A . n D 4 199 SER 199 199 199 SER SER A . n D 4 200 PHE 200 200 200 PHE PHE A . n D 4 201 THR 201 201 201 THR THR A . n D 4 202 SER 202 202 202 SER SER A . n D 4 203 GLU 203 203 203 GLU GLU A . n D 4 204 SER 204 204 204 SER SER A . n D 4 205 THR 205 205 ? ? ? A . n D 4 206 LYS 206 206 ? ? ? A . n D 4 207 GLN 207 207 207 GLN GLN A . n D 4 208 PRO 208 208 208 PRO PRO A . n D 4 209 LYS 209 209 209 LYS LYS A . n D 4 210 LEU 210 210 210 LEU LEU A . n D 4 211 LEU 211 211 211 LEU LEU A . n D 4 212 HIS 212 212 212 HIS HIS A . n D 4 213 GLN 213 213 213 GLN GLN A . n D 4 214 VAL 214 214 214 VAL VAL A . n D 4 215 VAL 215 215 215 VAL VAL A . n D 4 216 GLU 216 216 216 GLU GLU A . n D 4 217 GLN 217 217 217 GLN GLN A . n D 4 218 LEU 218 218 218 LEU LEU A . n D 4 219 GLN 219 219 219 GLN GLN A . n D 4 220 LYS 220 220 220 LYS LYS A . n D 4 221 VAL 221 221 221 VAL VAL A . n D 4 222 HIS 222 222 222 HIS HIS A . n D 4 223 PHE 223 223 223 PHE PHE A . n D 4 224 ILE 224 224 224 ILE ILE A . n D 4 225 THR 225 225 225 THR THR A . n D 4 226 ASP 226 226 226 ASP ASP A . n D 4 227 THR 227 227 227 THR THR A . n D 4 228 LEU 228 228 228 LEU LEU A . n D 4 229 SER 229 229 229 SER SER A . n D 4 230 LYS 230 230 230 LYS LYS A . n D 4 231 GLY 231 231 231 GLY GLY A . n D 4 232 GLU 232 232 232 GLU GLU A . n D 4 233 THR 233 233 233 THR THR A . n D 4 234 LYS 234 234 234 LYS LYS A . n D 4 235 PHE 235 235 235 PHE PHE A . n D 4 236 MET 236 236 236 MET MET A . n D 4 237 GLY 237 237 237 GLY GLY A . n D 4 238 VAL 238 238 238 VAL VAL A . n D 4 239 CYS 239 239 239 CYS CYS A . n D 4 240 GLN 240 240 240 GLN GLN A . n D 4 241 LEU 241 241 241 LEU LEU A . n D 4 242 PRO 242 242 242 PRO PRO A . n D 4 243 SER 243 243 243 SER SER A . n D 4 244 LYS 244 244 244 LYS LYS A . n D 4 245 ASN 245 245 245 ASN ASN A . n D 4 246 ASP 246 246 246 ASP ASP A . n D 4 247 GLU 247 247 247 GLU GLU A . n D 4 248 LYS 248 248 248 LYS LYS A . n D 4 249 GLU 249 249 249 GLU GLU A . n D 4 250 TYR 250 250 250 TYR TYR A . n D 4 251 PRO 251 251 251 PRO PRO A . n D 4 252 HIS 252 252 252 HIS HIS A . n D 4 253 ARG 253 253 253 ARG ARG A . n D 4 254 ARG 254 254 254 ARG ARG A . n D 4 255 ILE 255 255 255 ILE ILE A . n D 4 256 ASP 256 256 256 ASP ASP A . n D 4 257 ILE 257 257 257 ILE ILE A . n D 4 258 ARG 258 258 258 ARG ARG A . n D 4 259 LEU 259 259 259 LEU LEU A . n D 4 260 ILE 260 260 260 ILE ILE A . n D 4 261 PRO 261 261 261 PRO PRO A . n D 4 262 LYS 262 262 262 LYS LYS A . n D 4 263 ASP 263 263 263 ASP ASP A . n D 4 264 GLN 264 264 264 GLN GLN A . n D 4 265 TYR 265 265 265 TYR TYR A . n D 4 266 TYR 266 266 266 TYR TYR A . n D 4 267 CYS 267 267 267 CYS CYS A . n D 4 268 GLY 268 268 268 GLY GLY A . n D 4 269 VAL 269 269 269 VAL VAL A . n D 4 270 LEU 270 270 270 LEU LEU A . n D 4 271 TYR 271 271 271 TYR TYR A . n D 4 272 PHE 272 272 272 PHE PHE A . n D 4 273 THR 273 273 273 THR THR A . n D 4 274 GLY 274 274 274 GLY GLY A . n D 4 275 SER 275 275 275 SER SER A . n D 4 276 ASP 276 276 276 ASP ASP A . n D 4 277 ILE 277 277 277 ILE ILE A . n D 4 278 PHE 278 278 278 PHE PHE A . n D 4 279 ASN 279 279 279 ASN ASN A . n D 4 280 LYS 280 280 280 LYS LYS A . n D 4 281 ASN 281 281 281 ASN ASN A . n D 4 282 MET 282 282 282 MET MET A . n D 4 283 ARG 283 283 283 ARG ARG A . n D 4 284 ALA 284 284 284 ALA ALA A . n D 4 285 HIS 285 285 285 HIS HIS A . n D 4 286 ALA 286 286 286 ALA ALA A . n D 4 287 LEU 287 287 287 LEU LEU A . n D 4 288 GLU 288 288 288 GLU GLU A . n D 4 289 LYS 289 289 289 LYS LYS A . n D 4 290 GLY 290 290 290 GLY GLY A . n D 4 291 PHE 291 291 291 PHE PHE A . n D 4 292 THR 292 292 292 THR THR A . n D 4 293 ILE 293 293 293 ILE ILE A . n D 4 294 ASN 294 294 294 ASN ASN A . n D 4 295 GLU 295 295 295 GLU GLU A . n D 4 296 TYR 296 296 296 TYR TYR A . n D 4 297 THR 297 297 297 THR THR A . n D 4 298 ILE 298 298 298 ILE ILE A . n D 4 299 ARG 299 299 299 ARG ARG A . n D 4 300 PRO 300 300 300 PRO PRO A . n D 4 301 LEU 301 301 301 LEU LEU A . n D 4 302 GLY 302 302 302 GLY GLY A . n D 4 303 VAL 303 303 303 VAL VAL A . n D 4 304 THR 304 304 304 THR THR A . n D 4 305 GLY 305 305 305 GLY GLY A . n D 4 306 VAL 306 306 306 VAL VAL A . n D 4 307 ALA 307 307 307 ALA ALA A . n D 4 308 GLY 308 308 308 GLY GLY A . n D 4 309 GLU 309 309 309 GLU GLU A . n D 4 310 PRO 310 310 310 PRO PRO A . n D 4 311 LEU 311 311 311 LEU LEU A . n D 4 312 PRO 312 312 312 PRO PRO A . n D 4 313 VAL 313 313 313 VAL VAL A . n D 4 314 ASP 314 314 314 ASP ASP A . n D 4 315 SER 315 315 315 SER SER A . n D 4 316 GLU 316 316 316 GLU GLU A . n D 4 317 LYS 317 317 317 LYS LYS A . n D 4 318 ASP 318 318 318 ASP ASP A . n D 4 319 ILE 319 319 319 ILE ILE A . n D 4 320 PHE 320 320 320 PHE PHE A . n D 4 321 ASP 321 321 321 ASP ASP A . n D 4 322 TYR 322 322 322 TYR TYR A . n D 4 323 ILE 323 323 323 ILE ILE A . n D 4 324 GLN 324 324 324 GLN GLN A . n D 4 325 TRP 325 325 325 TRP TRP A . n D 4 326 LYS 326 326 326 LYS LYS A . n D 4 327 TYR 327 327 327 TYR TYR A . n D 4 328 ARG 328 328 328 ARG ARG A . n D 4 329 GLU 329 329 329 GLU GLU A . n D 4 330 PRO 330 330 330 PRO PRO A . n D 4 331 LYS 331 331 331 LYS LYS A . n D 4 332 ASP 332 332 332 ASP ASP A . n D 4 333 ARG 333 333 333 ARG ARG A . n D 4 334 SER 334 334 334 SER SER A . n D 4 335 GLU 335 335 335 GLU GLU A . n D 4 336 HIS 336 336 ? ? ? A . n D 4 337 HIS 337 337 ? ? ? A . n D 4 338 HIS 338 338 ? ? ? A . n D 4 339 HIS 339 339 ? ? ? A . n D 4 340 HIS 340 340 ? ? ? A . n D 4 341 HIS 341 341 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 CA 1 101 401 CA CA P . F 5 CA 1 102 404 CA CA P . G 6 TTP 1 103 11 TTP TTP P . H 5 CA 1 101 403 CA CA D . I 5 CA 1 401 402 CA CA A . J 5 CA 1 402 405 CA CA A . K 5 CA 1 403 406 CA CA A . L 5 CA 1 404 407 CA CA A . M 7 PEG 1 405 410 PEG PEG A . N 7 PEG 1 406 411 PEG PEG A . O 8 HOH 1 101 42 HOH HOH T . O 8 HOH 2 102 45 HOH HOH T . O 8 HOH 3 103 44 HOH HOH T . O 8 HOH 4 104 29 HOH HOH T . P 8 HOH 1 201 7 HOH HOH P . Q 8 HOH 1 201 35 HOH HOH D . Q 8 HOH 2 202 34 HOH HOH D . R 8 HOH 1 501 37 HOH HOH A . R 8 HOH 2 502 40 HOH HOH A . R 8 HOH 3 503 14 HOH HOH A . R 8 HOH 4 504 5 HOH HOH A . R 8 HOH 5 505 38 HOH HOH A . R 8 HOH 6 506 30 HOH HOH A . R 8 HOH 7 507 33 HOH HOH A . R 8 HOH 8 508 9 HOH HOH A . R 8 HOH 9 509 15 HOH HOH A . R 8 HOH 10 510 11 HOH HOH A . R 8 HOH 11 511 22 HOH HOH A . R 8 HOH 12 512 27 HOH HOH A . R 8 HOH 13 513 10 HOH HOH A . R 8 HOH 14 514 31 HOH HOH A . R 8 HOH 15 515 13 HOH HOH A . R 8 HOH 16 516 26 HOH HOH A . R 8 HOH 17 517 32 HOH HOH A . R 8 HOH 18 518 46 HOH HOH A . R 8 HOH 19 519 8 HOH HOH A . R 8 HOH 20 520 12 HOH HOH A . R 8 HOH 21 521 3 HOH HOH A . R 8 HOH 22 522 4 HOH HOH A . R 8 HOH 23 523 25 HOH HOH A . R 8 HOH 24 524 39 HOH HOH A . R 8 HOH 25 525 24 HOH HOH A . R 8 HOH 26 526 41 HOH HOH A . R 8 HOH 27 527 21 HOH HOH A . R 8 HOH 28 528 36 HOH HOH A . R 8 HOH 29 529 18 HOH HOH A . R 8 HOH 30 530 6 HOH HOH A . R 8 HOH 31 531 43 HOH HOH A . R 8 HOH 32 532 17 HOH HOH A . R 8 HOH 33 533 48 HOH HOH A . R 8 HOH 34 534 1 HOH HOH A . R 8 HOH 35 535 23 HOH HOH A . R 8 HOH 36 536 20 HOH HOH A . R 8 HOH 37 537 28 HOH HOH A . R 8 HOH 38 538 47 HOH HOH A . R 8 HOH 39 539 16 HOH HOH A . R 8 HOH 40 540 2 HOH HOH A . R 8 HOH 41 541 19 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6980 ? 1 MORE -86 ? 1 'SSA (A^2)' 19970 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? B DC 9 ? P DC 9 ? 1_555 CA ? F CA . ? P CA 102 ? 1_555 OP2 ? B DC 9 ? P DC 9 ? 1_555 58.9 ? 2 OP1 ? B DC 9 ? P DC 9 ? 1_555 CA ? F CA . ? P CA 102 ? 1_555 O ? P HOH . ? P HOH 201 ? 1_555 91.8 ? 3 OP2 ? B DC 9 ? P DC 9 ? 1_555 CA ? F CA . ? P CA 102 ? 1_555 O ? P HOH . ? P HOH 201 ? 1_555 108.9 ? 4 OP1 ? B DC 9 ? P DC 9 ? 1_555 CA ? F CA . ? P CA 102 ? 1_555 O ? D THR 101 ? A THR 101 ? 1_555 171.5 ? 5 OP2 ? B DC 9 ? P DC 9 ? 1_555 CA ? F CA . ? P CA 102 ? 1_555 O ? D THR 101 ? A THR 101 ? 1_555 125.2 ? 6 O ? P HOH . ? P HOH 201 ? 1_555 CA ? F CA . ? P CA 102 ? 1_555 O ? D THR 101 ? A THR 101 ? 1_555 93.4 ? 7 OP1 ? B DC 9 ? P DC 9 ? 1_555 CA ? F CA . ? P CA 102 ? 1_555 O ? D VAL 103 ? A VAL 103 ? 1_555 93.9 ? 8 OP2 ? B DC 9 ? P DC 9 ? 1_555 CA ? F CA . ? P CA 102 ? 1_555 O ? D VAL 103 ? A VAL 103 ? 1_555 140.4 ? 9 O ? P HOH . ? P HOH 201 ? 1_555 CA ? F CA . ? P CA 102 ? 1_555 O ? D VAL 103 ? A VAL 103 ? 1_555 99.5 ? 10 O ? D THR 101 ? A THR 101 ? 1_555 CA ? F CA . ? P CA 102 ? 1_555 O ? D VAL 103 ? A VAL 103 ? 1_555 78.6 ? 11 OP1 ? B DC 9 ? P DC 9 ? 1_555 CA ? F CA . ? P CA 102 ? 1_555 O ? D ILE 106 ? A ILE 106 ? 1_555 99.1 ? 12 OP2 ? B DC 9 ? P DC 9 ? 1_555 CA ? F CA . ? P CA 102 ? 1_555 O ? D ILE 106 ? A ILE 106 ? 1_555 78.9 ? 13 O ? P HOH . ? P HOH 201 ? 1_555 CA ? F CA . ? P CA 102 ? 1_555 O ? D ILE 106 ? A ILE 106 ? 1_555 168.9 ? 14 O ? D THR 101 ? A THR 101 ? 1_555 CA ? F CA . ? P CA 102 ? 1_555 O ? D ILE 106 ? A ILE 106 ? 1_555 75.5 ? 15 O ? D VAL 103 ? A VAL 103 ? 1_555 CA ? F CA . ? P CA 102 ? 1_555 O ? D ILE 106 ? A ILE 106 ? 1_555 77.8 ? 16 "O3'" ? B DC 10 ? P DC 10 ? 1_555 CA ? E CA . ? P CA 101 ? 1_555 O2A ? G TTP . ? P TTP 103 ? 1_555 102.3 ? 17 "O3'" ? B DC 10 ? P DC 10 ? 1_555 CA ? E CA . ? P CA 101 ? 1_555 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 154.4 ? 18 O2A ? G TTP . ? P TTP 103 ? 1_555 CA ? E CA . ? P CA 101 ? 1_555 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 52.8 ? 19 "O3'" ? B DC 10 ? P DC 10 ? 1_555 CA ? E CA . ? P CA 101 ? 1_555 OD2 ? D ASP 190 ? A ASP 190 ? 1_555 162.1 ? 20 O2A ? G TTP . ? P TTP 103 ? 1_555 CA ? E CA . ? P CA 101 ? 1_555 OD2 ? D ASP 190 ? A ASP 190 ? 1_555 94.4 ? 21 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 CA ? E CA . ? P CA 101 ? 1_555 OD2 ? D ASP 190 ? A ASP 190 ? 1_555 43.4 ? 22 "O3'" ? B DC 10 ? P DC 10 ? 1_555 CA ? E CA . ? P CA 101 ? 1_555 OD1 ? D ASP 192 ? A ASP 192 ? 1_555 88.9 ? 23 O2A ? G TTP . ? P TTP 103 ? 1_555 CA ? E CA . ? P CA 101 ? 1_555 OD1 ? D ASP 192 ? A ASP 192 ? 1_555 88.1 ? 24 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 CA ? E CA . ? P CA 101 ? 1_555 OD1 ? D ASP 192 ? A ASP 192 ? 1_555 84.7 ? 25 OD2 ? D ASP 190 ? A ASP 190 ? 1_555 CA ? E CA . ? P CA 101 ? 1_555 OD1 ? D ASP 192 ? A ASP 192 ? 1_555 98.3 ? 26 "O3'" ? B DC 10 ? P DC 10 ? 1_555 CA ? E CA . ? P CA 101 ? 1_555 OD2 ? D ASP 256 ? A ASP 256 ? 1_555 77.9 ? 27 O2A ? G TTP . ? P TTP 103 ? 1_555 CA ? E CA . ? P CA 101 ? 1_555 OD2 ? D ASP 256 ? A ASP 256 ? 1_555 172.3 ? 28 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 CA ? E CA . ? P CA 101 ? 1_555 OD2 ? D ASP 256 ? A ASP 256 ? 1_555 125.9 ? 29 OD2 ? D ASP 190 ? A ASP 190 ? 1_555 CA ? E CA . ? P CA 101 ? 1_555 OD2 ? D ASP 256 ? A ASP 256 ? 1_555 86.6 ? 30 OD1 ? D ASP 192 ? A ASP 192 ? 1_555 CA ? E CA . ? P CA 101 ? 1_555 OD2 ? D ASP 256 ? A ASP 256 ? 1_555 84.1 ? 31 O2A ? G TTP . ? P TTP 103 ? 1_555 CA ? I CA . ? A CA 401 ? 1_555 O2B ? G TTP . ? P TTP 103 ? 1_555 85.0 ? 32 O2A ? G TTP . ? P TTP 103 ? 1_555 CA ? I CA . ? A CA 401 ? 1_555 O2G ? G TTP . ? P TTP 103 ? 1_555 76.2 ? 33 O2B ? G TTP . ? P TTP 103 ? 1_555 CA ? I CA . ? A CA 401 ? 1_555 O2G ? G TTP . ? P TTP 103 ? 1_555 76.1 ? 34 O2A ? G TTP . ? P TTP 103 ? 1_555 CA ? I CA . ? A CA 401 ? 1_555 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 68.9 ? 35 O2B ? G TTP . ? P TTP 103 ? 1_555 CA ? I CA . ? A CA 401 ? 1_555 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 149.4 ? 36 O2G ? G TTP . ? P TTP 103 ? 1_555 CA ? I CA . ? A CA 401 ? 1_555 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 82.3 ? 37 O2A ? G TTP . ? P TTP 103 ? 1_555 CA ? I CA . ? A CA 401 ? 1_555 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 79.3 ? 38 O2B ? G TTP . ? P TTP 103 ? 1_555 CA ? I CA . ? A CA 401 ? 1_555 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 92.5 ? 39 O2G ? G TTP . ? P TTP 103 ? 1_555 CA ? I CA . ? A CA 401 ? 1_555 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 153.7 ? 40 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 CA ? I CA . ? A CA 401 ? 1_555 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 97.7 ? 41 OP1 ? C DC 3 ? D DC 3 ? 1_555 CA ? H CA . ? D CA 101 ? 1_555 O ? Q HOH . ? D HOH 202 ? 1_555 64.1 ? 42 OP1 ? C DC 3 ? D DC 3 ? 1_555 CA ? H CA . ? D CA 101 ? 1_555 O ? D LYS 60 ? A LYS 60 ? 1_555 153.8 ? 43 O ? Q HOH . ? D HOH 202 ? 1_555 CA ? H CA . ? D CA 101 ? 1_555 O ? D LYS 60 ? A LYS 60 ? 1_555 141.3 ? 44 OP1 ? C DC 3 ? D DC 3 ? 1_555 CA ? H CA . ? D CA 101 ? 1_555 O ? D LEU 62 ? A LEU 62 ? 1_555 93.6 ? 45 O ? Q HOH . ? D HOH 202 ? 1_555 CA ? H CA . ? D CA 101 ? 1_555 O ? D LEU 62 ? A LEU 62 ? 1_555 98.5 ? 46 O ? D LYS 60 ? A LYS 60 ? 1_555 CA ? H CA . ? D CA 101 ? 1_555 O ? D LEU 62 ? A LEU 62 ? 1_555 78.2 ? 47 OP1 ? C DC 3 ? D DC 3 ? 1_555 CA ? H CA . ? D CA 101 ? 1_555 O ? D VAL 65 ? A VAL 65 ? 1_555 81.5 ? 48 O ? Q HOH . ? D HOH 202 ? 1_555 CA ? H CA . ? D CA 101 ? 1_555 O ? D VAL 65 ? A VAL 65 ? 1_555 145.6 ? 49 O ? D LYS 60 ? A LYS 60 ? 1_555 CA ? H CA . ? D CA 101 ? 1_555 O ? D VAL 65 ? A VAL 65 ? 1_555 73.0 ? 50 O ? D LEU 62 ? A LEU 62 ? 1_555 CA ? H CA . ? D CA 101 ? 1_555 O ? D VAL 65 ? A VAL 65 ? 1_555 83.3 ? 51 OE1 ? D GLU 249 ? A GLU 249 ? 1_555 CA ? K CA . ? A CA 403 ? 1_555 OE2 ? D GLU 249 ? A GLU 249 ? 1_555 43.8 ? 52 OE1 ? D GLU 249 ? A GLU 249 ? 1_555 CA ? K CA . ? A CA 403 ? 1_555 O ? R HOH . ? A HOH 535 ? 1_556 152.1 ? 53 OE2 ? D GLU 249 ? A GLU 249 ? 1_555 CA ? K CA . ? A CA 403 ? 1_555 O ? R HOH . ? A HOH 535 ? 1_556 134.3 ? 54 OD1 ? D ASP 314 ? A ASP 314 ? 1_555 CA ? J CA . ? A CA 402 ? 1_555 OD1 ? D ASP 318 ? A ASP 318 ? 1_555 74.9 ? 55 OD1 ? D ASP 314 ? A ASP 314 ? 1_555 CA ? J CA . ? A CA 402 ? 1_555 O ? R HOH . ? A HOH 537 ? 1_555 93.5 ? 56 OD1 ? D ASP 318 ? A ASP 318 ? 1_555 CA ? J CA . ? A CA 402 ? 1_555 O ? R HOH . ? A HOH 537 ? 1_555 78.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-07-19 2 'Structure model' 1 1 2017-07-26 3 'Structure model' 1 2 2017-11-22 4 'Structure model' 1 3 2022-03-23 5 'Structure model' 1 4 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' software 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_audit_support 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond 9 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 3 'Structure model' '_software.classification' 5 4 'Structure model' '_database_2.pdbx_DOI' 6 4 'Structure model' '_database_2.pdbx_database_accession' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 24 4 'Structure model' '_pdbx_struct_conn_angle.value' 25 4 'Structure model' '_struct_conn.pdbx_dist_value' 26 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 27 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 28 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 32 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 33 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 34 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 35 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 39 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0073 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 6 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 "O5'" _pdbx_validate_symm_contact.auth_asym_id_1 T _pdbx_validate_symm_contact.auth_comp_id_1 DC _pdbx_validate_symm_contact.auth_seq_id_1 1 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 ASP _pdbx_validate_symm_contact.auth_seq_id_2 314 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_655 _pdbx_validate_symm_contact.dist 1.96 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.486 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.121 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 142 ? ? -109.81 41.21 2 1 CYS A 178 ? ? -103.88 -138.65 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 127 ? CG ? D LYS 127 CG 2 1 Y 1 A LYS 127 ? CD ? D LYS 127 CD 3 1 Y 1 A LYS 127 ? CE ? D LYS 127 CE 4 1 Y 1 A LYS 127 ? NZ ? D LYS 127 NZ 5 1 Y 1 A GLU 129 ? CG ? D GLU 129 CG 6 1 Y 1 A GLU 129 ? CD ? D GLU 129 CD 7 1 Y 1 A GLU 129 ? OE1 ? D GLU 129 OE1 8 1 Y 1 A GLU 129 ? OE2 ? D GLU 129 OE2 9 1 Y 1 A LYS 131 ? CG ? D LYS 131 CG 10 1 Y 1 A LYS 131 ? CD ? D LYS 131 CD 11 1 Y 1 A LYS 131 ? CE ? D LYS 131 CE 12 1 Y 1 A LYS 131 ? NZ ? D LYS 131 NZ 13 1 Y 1 A GLN 207 ? CG ? D GLN 207 CG 14 1 Y 1 A GLN 207 ? CD ? D GLN 207 CD 15 1 Y 1 A GLN 207 ? OE1 ? D GLN 207 OE1 16 1 Y 1 A GLN 207 ? NE2 ? D GLN 207 NE2 17 1 Y 1 A LYS 248 ? CG ? D LYS 248 CG 18 1 Y 1 A LYS 248 ? CD ? D LYS 248 CD 19 1 Y 1 A LYS 248 ? CE ? D LYS 248 CE 20 1 Y 1 A LYS 248 ? NZ ? D LYS 248 NZ 21 1 Y 1 A LYS 280 ? CG ? D LYS 280 CG 22 1 Y 1 A LYS 280 ? CD ? D LYS 280 CD 23 1 Y 1 A LYS 280 ? CE ? D LYS 280 CE 24 1 Y 1 A LYS 280 ? NZ ? D LYS 280 NZ 25 1 Y 1 A GLU 288 ? CG ? D GLU 288 CG 26 1 Y 1 A GLU 288 ? CD ? D GLU 288 CD 27 1 Y 1 A GLU 288 ? OE1 ? D GLU 288 OE1 28 1 Y 1 A GLU 288 ? OE2 ? D GLU 288 OE2 29 1 Y 1 A VAL 303 ? CG1 ? D VAL 303 CG1 30 1 Y 1 A VAL 303 ? CG2 ? D VAL 303 CG2 31 1 Y 1 A LYS 326 ? CG ? D LYS 326 CG 32 1 Y 1 A LYS 326 ? CD ? D LYS 326 CD 33 1 Y 1 A LYS 326 ? CE ? D LYS 326 CE 34 1 Y 1 A LYS 326 ? NZ ? D LYS 326 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? D MET 1 2 1 Y 1 A SER 2 ? D SER 2 3 1 Y 1 A LYS 3 ? D LYS 3 4 1 Y 1 A ARG 4 ? D ARG 4 5 1 Y 1 A LYS 5 ? D LYS 5 6 1 Y 1 A ALA 6 ? D ALA 6 7 1 Y 1 A PRO 7 ? D PRO 7 8 1 Y 1 A GLN 8 ? D GLN 8 9 1 Y 1 A THR 205 ? D THR 205 10 1 Y 1 A LYS 206 ? D LYS 206 11 1 Y 1 A HIS 336 ? D HIS 336 12 1 Y 1 A HIS 337 ? D HIS 337 13 1 Y 1 A HIS 338 ? D HIS 338 14 1 Y 1 A HIS 339 ? D HIS 339 15 1 Y 1 A HIS 340 ? D HIS 340 16 1 Y 1 A HIS 341 ? D HIS 341 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8OG OP3 O N N 1 8OG P P N N 2 8OG OP1 O N N 3 8OG OP2 O N N 4 8OG "O5'" O N N 5 8OG "C5'" C N N 6 8OG "C4'" C N R 7 8OG "O4'" O N N 8 8OG "C3'" C N S 9 8OG "O3'" O N N 10 8OG "C2'" C N N 11 8OG "C1'" C N R 12 8OG N9 N N N 13 8OG C8 C N N 14 8OG N7 N N N 15 8OG C5 C N N 16 8OG C6 C N N 17 8OG O6 O N N 18 8OG N1 N N N 19 8OG C2 C N N 20 8OG N2 N N N 21 8OG N3 N N N 22 8OG C4 C N N 23 8OG O8 O N N 24 8OG HOP3 H N N 25 8OG HOP2 H N N 26 8OG "H5'" H N N 27 8OG "H5''" H N N 28 8OG "H4'" H N N 29 8OG "H3'" H N N 30 8OG "HO3'" H N N 31 8OG "H2'" H N N 32 8OG "H2''" H N N 33 8OG "H1'" H N N 34 8OG H7 H N N 35 8OG H1 H N N 36 8OG H21 H N N 37 8OG H22 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 CA CA CA N N 112 CYS N N N N 113 CYS CA C N R 114 CYS C C N N 115 CYS O O N N 116 CYS CB C N N 117 CYS SG S N N 118 CYS OXT O N N 119 CYS H H N N 120 CYS H2 H N N 121 CYS HA H N N 122 CYS HB2 H N N 123 CYS HB3 H N N 124 CYS HG H N N 125 CYS HXT H N N 126 DA OP3 O N N 127 DA P P N N 128 DA OP1 O N N 129 DA OP2 O N N 130 DA "O5'" O N N 131 DA "C5'" C N N 132 DA "C4'" C N R 133 DA "O4'" O N N 134 DA "C3'" C N S 135 DA "O3'" O N N 136 DA "C2'" C N N 137 DA "C1'" C N R 138 DA N9 N Y N 139 DA C8 C Y N 140 DA N7 N Y N 141 DA C5 C Y N 142 DA C6 C Y N 143 DA N6 N N N 144 DA N1 N Y N 145 DA C2 C Y N 146 DA N3 N Y N 147 DA C4 C Y N 148 DA HOP3 H N N 149 DA HOP2 H N N 150 DA "H5'" H N N 151 DA "H5''" H N N 152 DA "H4'" H N N 153 DA "H3'" H N N 154 DA "HO3'" H N N 155 DA "H2'" H N N 156 DA "H2''" H N N 157 DA "H1'" H N N 158 DA H8 H N N 159 DA H61 H N N 160 DA H62 H N N 161 DA H2 H N N 162 DC OP3 O N N 163 DC P P N N 164 DC OP1 O N N 165 DC OP2 O N N 166 DC "O5'" O N N 167 DC "C5'" C N N 168 DC "C4'" C N R 169 DC "O4'" O N N 170 DC "C3'" C N S 171 DC "O3'" O N N 172 DC "C2'" C N N 173 DC "C1'" C N R 174 DC N1 N N N 175 DC C2 C N N 176 DC O2 O N N 177 DC N3 N N N 178 DC C4 C N N 179 DC N4 N N N 180 DC C5 C N N 181 DC C6 C N N 182 DC HOP3 H N N 183 DC HOP2 H N N 184 DC "H5'" H N N 185 DC "H5''" H N N 186 DC "H4'" H N N 187 DC "H3'" H N N 188 DC "HO3'" H N N 189 DC "H2'" H N N 190 DC "H2''" H N N 191 DC "H1'" H N N 192 DC H41 H N N 193 DC H42 H N N 194 DC H5 H N N 195 DC H6 H N N 196 DG OP3 O N N 197 DG P P N N 198 DG OP1 O N N 199 DG OP2 O N N 200 DG "O5'" O N N 201 DG "C5'" C N N 202 DG "C4'" C N R 203 DG "O4'" O N N 204 DG "C3'" C N S 205 DG "O3'" O N N 206 DG "C2'" C N N 207 DG "C1'" C N R 208 DG N9 N Y N 209 DG C8 C Y N 210 DG N7 N Y N 211 DG C5 C Y N 212 DG C6 C N N 213 DG O6 O N N 214 DG N1 N N N 215 DG C2 C N N 216 DG N2 N N N 217 DG N3 N N N 218 DG C4 C Y N 219 DG HOP3 H N N 220 DG HOP2 H N N 221 DG "H5'" H N N 222 DG "H5''" H N N 223 DG "H4'" H N N 224 DG "H3'" H N N 225 DG "HO3'" H N N 226 DG "H2'" H N N 227 DG "H2''" H N N 228 DG "H1'" H N N 229 DG H8 H N N 230 DG H1 H N N 231 DG H21 H N N 232 DG H22 H N N 233 DT OP3 O N N 234 DT P P N N 235 DT OP1 O N N 236 DT OP2 O N N 237 DT "O5'" O N N 238 DT "C5'" C N N 239 DT "C4'" C N R 240 DT "O4'" O N N 241 DT "C3'" C N S 242 DT "O3'" O N N 243 DT "C2'" C N N 244 DT "C1'" C N R 245 DT N1 N N N 246 DT C2 C N N 247 DT O2 O N N 248 DT N3 N N N 249 DT C4 C N N 250 DT O4 O N N 251 DT C5 C N N 252 DT C7 C N N 253 DT C6 C N N 254 DT HOP3 H N N 255 DT HOP2 H N N 256 DT "H5'" H N N 257 DT "H5''" H N N 258 DT "H4'" H N N 259 DT "H3'" H N N 260 DT "HO3'" H N N 261 DT "H2'" H N N 262 DT "H2''" H N N 263 DT "H1'" H N N 264 DT H3 H N N 265 DT H71 H N N 266 DT H72 H N N 267 DT H73 H N N 268 DT H6 H N N 269 GLN N N N N 270 GLN CA C N S 271 GLN C C N N 272 GLN O O N N 273 GLN CB C N N 274 GLN CG C N N 275 GLN CD C N N 276 GLN OE1 O N N 277 GLN NE2 N N N 278 GLN OXT O N N 279 GLN H H N N 280 GLN H2 H N N 281 GLN HA H N N 282 GLN HB2 H N N 283 GLN HB3 H N N 284 GLN HG2 H N N 285 GLN HG3 H N N 286 GLN HE21 H N N 287 GLN HE22 H N N 288 GLN HXT H N N 289 GLU N N N N 290 GLU CA C N S 291 GLU C C N N 292 GLU O O N N 293 GLU CB C N N 294 GLU CG C N N 295 GLU CD C N N 296 GLU OE1 O N N 297 GLU OE2 O N N 298 GLU OXT O N N 299 GLU H H N N 300 GLU H2 H N N 301 GLU HA H N N 302 GLU HB2 H N N 303 GLU HB3 H N N 304 GLU HG2 H N N 305 GLU HG3 H N N 306 GLU HE2 H N N 307 GLU HXT H N N 308 GLY N N N N 309 GLY CA C N N 310 GLY C C N N 311 GLY O O N N 312 GLY OXT O N N 313 GLY H H N N 314 GLY H2 H N N 315 GLY HA2 H N N 316 GLY HA3 H N N 317 GLY HXT H N N 318 HIS N N N N 319 HIS CA C N S 320 HIS C C N N 321 HIS O O N N 322 HIS CB C N N 323 HIS CG C Y N 324 HIS ND1 N Y N 325 HIS CD2 C Y N 326 HIS CE1 C Y N 327 HIS NE2 N Y N 328 HIS OXT O N N 329 HIS H H N N 330 HIS H2 H N N 331 HIS HA H N N 332 HIS HB2 H N N 333 HIS HB3 H N N 334 HIS HD1 H N N 335 HIS HD2 H N N 336 HIS HE1 H N N 337 HIS HE2 H N N 338 HIS HXT H N N 339 HOH O O N N 340 HOH H1 H N N 341 HOH H2 H N N 342 ILE N N N N 343 ILE CA C N S 344 ILE C C N N 345 ILE O O N N 346 ILE CB C N S 347 ILE CG1 C N N 348 ILE CG2 C N N 349 ILE CD1 C N N 350 ILE OXT O N N 351 ILE H H N N 352 ILE H2 H N N 353 ILE HA H N N 354 ILE HB H N N 355 ILE HG12 H N N 356 ILE HG13 H N N 357 ILE HG21 H N N 358 ILE HG22 H N N 359 ILE HG23 H N N 360 ILE HD11 H N N 361 ILE HD12 H N N 362 ILE HD13 H N N 363 ILE HXT H N N 364 LEU N N N N 365 LEU CA C N S 366 LEU C C N N 367 LEU O O N N 368 LEU CB C N N 369 LEU CG C N N 370 LEU CD1 C N N 371 LEU CD2 C N N 372 LEU OXT O N N 373 LEU H H N N 374 LEU H2 H N N 375 LEU HA H N N 376 LEU HB2 H N N 377 LEU HB3 H N N 378 LEU HG H N N 379 LEU HD11 H N N 380 LEU HD12 H N N 381 LEU HD13 H N N 382 LEU HD21 H N N 383 LEU HD22 H N N 384 LEU HD23 H N N 385 LEU HXT H N N 386 LYS N N N N 387 LYS CA C N S 388 LYS C C N N 389 LYS O O N N 390 LYS CB C N N 391 LYS CG C N N 392 LYS CD C N N 393 LYS CE C N N 394 LYS NZ N N N 395 LYS OXT O N N 396 LYS H H N N 397 LYS H2 H N N 398 LYS HA H N N 399 LYS HB2 H N N 400 LYS HB3 H N N 401 LYS HG2 H N N 402 LYS HG3 H N N 403 LYS HD2 H N N 404 LYS HD3 H N N 405 LYS HE2 H N N 406 LYS HE3 H N N 407 LYS HZ1 H N N 408 LYS HZ2 H N N 409 LYS HZ3 H N N 410 LYS HXT H N N 411 MET N N N N 412 MET CA C N S 413 MET C C N N 414 MET O O N N 415 MET CB C N N 416 MET CG C N N 417 MET SD S N N 418 MET CE C N N 419 MET OXT O N N 420 MET H H N N 421 MET H2 H N N 422 MET HA H N N 423 MET HB2 H N N 424 MET HB3 H N N 425 MET HG2 H N N 426 MET HG3 H N N 427 MET HE1 H N N 428 MET HE2 H N N 429 MET HE3 H N N 430 MET HXT H N N 431 PEG C1 C N N 432 PEG O1 O N N 433 PEG C2 C N N 434 PEG O2 O N N 435 PEG C3 C N N 436 PEG C4 C N N 437 PEG O4 O N N 438 PEG H11 H N N 439 PEG H12 H N N 440 PEG HO1 H N N 441 PEG H21 H N N 442 PEG H22 H N N 443 PEG H31 H N N 444 PEG H32 H N N 445 PEG H41 H N N 446 PEG H42 H N N 447 PEG HO4 H N N 448 PHE N N N N 449 PHE CA C N S 450 PHE C C N N 451 PHE O O N N 452 PHE CB C N N 453 PHE CG C Y N 454 PHE CD1 C Y N 455 PHE CD2 C Y N 456 PHE CE1 C Y N 457 PHE CE2 C Y N 458 PHE CZ C Y N 459 PHE OXT O N N 460 PHE H H N N 461 PHE H2 H N N 462 PHE HA H N N 463 PHE HB2 H N N 464 PHE HB3 H N N 465 PHE HD1 H N N 466 PHE HD2 H N N 467 PHE HE1 H N N 468 PHE HE2 H N N 469 PHE HZ H N N 470 PHE HXT H N N 471 PRO N N N N 472 PRO CA C N S 473 PRO C C N N 474 PRO O O N N 475 PRO CB C N N 476 PRO CG C N N 477 PRO CD C N N 478 PRO OXT O N N 479 PRO H H N N 480 PRO HA H N N 481 PRO HB2 H N N 482 PRO HB3 H N N 483 PRO HG2 H N N 484 PRO HG3 H N N 485 PRO HD2 H N N 486 PRO HD3 H N N 487 PRO HXT H N N 488 SER N N N N 489 SER CA C N S 490 SER C C N N 491 SER O O N N 492 SER CB C N N 493 SER OG O N N 494 SER OXT O N N 495 SER H H N N 496 SER H2 H N N 497 SER HA H N N 498 SER HB2 H N N 499 SER HB3 H N N 500 SER HG H N N 501 SER HXT H N N 502 THR N N N N 503 THR CA C N S 504 THR C C N N 505 THR O O N N 506 THR CB C N R 507 THR OG1 O N N 508 THR CG2 C N N 509 THR OXT O N N 510 THR H H N N 511 THR H2 H N N 512 THR HA H N N 513 THR HB H N N 514 THR HG1 H N N 515 THR HG21 H N N 516 THR HG22 H N N 517 THR HG23 H N N 518 THR HXT H N N 519 TRP N N N N 520 TRP CA C N S 521 TRP C C N N 522 TRP O O N N 523 TRP CB C N N 524 TRP CG C Y N 525 TRP CD1 C Y N 526 TRP CD2 C Y N 527 TRP NE1 N Y N 528 TRP CE2 C Y N 529 TRP CE3 C Y N 530 TRP CZ2 C Y N 531 TRP CZ3 C Y N 532 TRP CH2 C Y N 533 TRP OXT O N N 534 TRP H H N N 535 TRP H2 H N N 536 TRP HA H N N 537 TRP HB2 H N N 538 TRP HB3 H N N 539 TRP HD1 H N N 540 TRP HE1 H N N 541 TRP HE3 H N N 542 TRP HZ2 H N N 543 TRP HZ3 H N N 544 TRP HH2 H N N 545 TRP HXT H N N 546 TTP PA P N S 547 TTP O1A O N N 548 TTP O2A O N N 549 TTP O3A O N N 550 TTP PB P N S 551 TTP O1B O N N 552 TTP O2B O N N 553 TTP O3B O N N 554 TTP PG P N N 555 TTP O1G O N N 556 TTP O2G O N N 557 TTP O3G O N N 558 TTP "O5'" O N N 559 TTP "C5'" C N N 560 TTP "C4'" C N R 561 TTP "O4'" O N N 562 TTP "C3'" C N S 563 TTP "O3'" O N N 564 TTP "C2'" C N N 565 TTP "C1'" C N R 566 TTP N1 N N N 567 TTP C2 C N N 568 TTP O2 O N N 569 TTP N3 N N N 570 TTP C4 C N N 571 TTP O4 O N N 572 TTP C5 C N N 573 TTP C5M C N N 574 TTP C6 C N N 575 TTP HOA2 H N N 576 TTP HOB2 H N N 577 TTP HOG2 H N N 578 TTP HOG3 H N N 579 TTP "H5'1" H N N 580 TTP "H5'2" H N N 581 TTP "H4'" H N N 582 TTP "H3'" H N N 583 TTP "HO3'" H N N 584 TTP "H2'1" H N N 585 TTP "H2'2" H N N 586 TTP "H1'" H N N 587 TTP HN3 H N N 588 TTP HM51 H N N 589 TTP HM52 H N N 590 TTP HM53 H N N 591 TTP H6 H N N 592 TYR N N N N 593 TYR CA C N S 594 TYR C C N N 595 TYR O O N N 596 TYR CB C N N 597 TYR CG C Y N 598 TYR CD1 C Y N 599 TYR CD2 C Y N 600 TYR CE1 C Y N 601 TYR CE2 C Y N 602 TYR CZ C Y N 603 TYR OH O N N 604 TYR OXT O N N 605 TYR H H N N 606 TYR H2 H N N 607 TYR HA H N N 608 TYR HB2 H N N 609 TYR HB3 H N N 610 TYR HD1 H N N 611 TYR HD2 H N N 612 TYR HE1 H N N 613 TYR HE2 H N N 614 TYR HH H N N 615 TYR HXT H N N 616 VAL N N N N 617 VAL CA C N S 618 VAL C C N N 619 VAL O O N N 620 VAL CB C N N 621 VAL CG1 C N N 622 VAL CG2 C N N 623 VAL OXT O N N 624 VAL H H N N 625 VAL H2 H N N 626 VAL HA H N N 627 VAL HB H N N 628 VAL HG11 H N N 629 VAL HG12 H N N 630 VAL HG13 H N N 631 VAL HG21 H N N 632 VAL HG22 H N N 633 VAL HG23 H N N 634 VAL HXT H N N 635 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8OG OP3 P sing N N 1 8OG OP3 HOP3 sing N N 2 8OG P OP1 doub N N 3 8OG P OP2 sing N N 4 8OG P "O5'" sing N N 5 8OG OP2 HOP2 sing N N 6 8OG "O5'" "C5'" sing N N 7 8OG "C5'" "C4'" sing N N 8 8OG "C5'" "H5'" sing N N 9 8OG "C5'" "H5''" sing N N 10 8OG "C4'" "O4'" sing N N 11 8OG "C4'" "C3'" sing N N 12 8OG "C4'" "H4'" sing N N 13 8OG "O4'" "C1'" sing N N 14 8OG "C3'" "O3'" sing N N 15 8OG "C3'" "C2'" sing N N 16 8OG "C3'" "H3'" sing N N 17 8OG "O3'" "HO3'" sing N N 18 8OG "C2'" "C1'" sing N N 19 8OG "C2'" "H2'" sing N N 20 8OG "C2'" "H2''" sing N N 21 8OG "C1'" N9 sing N N 22 8OG "C1'" "H1'" sing N N 23 8OG N9 C8 sing N N 24 8OG N9 C4 sing N N 25 8OG C8 N7 sing N N 26 8OG C8 O8 doub N N 27 8OG N7 C5 sing N N 28 8OG N7 H7 sing N N 29 8OG C5 C6 sing N N 30 8OG C5 C4 doub N N 31 8OG C6 O6 doub N N 32 8OG C6 N1 sing N N 33 8OG N1 C2 sing N N 34 8OG N1 H1 sing N N 35 8OG C2 N2 sing N N 36 8OG C2 N3 doub N N 37 8OG N2 H21 sing N N 38 8OG N2 H22 sing N N 39 8OG N3 C4 sing N N 40 ALA N CA sing N N 41 ALA N H sing N N 42 ALA N H2 sing N N 43 ALA CA C sing N N 44 ALA CA CB sing N N 45 ALA CA HA sing N N 46 ALA C O doub N N 47 ALA C OXT sing N N 48 ALA CB HB1 sing N N 49 ALA CB HB2 sing N N 50 ALA CB HB3 sing N N 51 ALA OXT HXT sing N N 52 ARG N CA sing N N 53 ARG N H sing N N 54 ARG N H2 sing N N 55 ARG CA C sing N N 56 ARG CA CB sing N N 57 ARG CA HA sing N N 58 ARG C O doub N N 59 ARG C OXT sing N N 60 ARG CB CG sing N N 61 ARG CB HB2 sing N N 62 ARG CB HB3 sing N N 63 ARG CG CD sing N N 64 ARG CG HG2 sing N N 65 ARG CG HG3 sing N N 66 ARG CD NE sing N N 67 ARG CD HD2 sing N N 68 ARG CD HD3 sing N N 69 ARG NE CZ sing N N 70 ARG NE HE sing N N 71 ARG CZ NH1 sing N N 72 ARG CZ NH2 doub N N 73 ARG NH1 HH11 sing N N 74 ARG NH1 HH12 sing N N 75 ARG NH2 HH21 sing N N 76 ARG NH2 HH22 sing N N 77 ARG OXT HXT sing N N 78 ASN N CA sing N N 79 ASN N H sing N N 80 ASN N H2 sing N N 81 ASN CA C sing N N 82 ASN CA CB sing N N 83 ASN CA HA sing N N 84 ASN C O doub N N 85 ASN C OXT sing N N 86 ASN CB CG sing N N 87 ASN CB HB2 sing N N 88 ASN CB HB3 sing N N 89 ASN CG OD1 doub N N 90 ASN CG ND2 sing N N 91 ASN ND2 HD21 sing N N 92 ASN ND2 HD22 sing N N 93 ASN OXT HXT sing N N 94 ASP N CA sing N N 95 ASP N H sing N N 96 ASP N H2 sing N N 97 ASP CA C sing N N 98 ASP CA CB sing N N 99 ASP CA HA sing N N 100 ASP C O doub N N 101 ASP C OXT sing N N 102 ASP CB CG sing N N 103 ASP CB HB2 sing N N 104 ASP CB HB3 sing N N 105 ASP CG OD1 doub N N 106 ASP CG OD2 sing N N 107 ASP OD2 HD2 sing N N 108 ASP OXT HXT sing N N 109 CYS N CA sing N N 110 CYS N H sing N N 111 CYS N H2 sing N N 112 CYS CA C sing N N 113 CYS CA CB sing N N 114 CYS CA HA sing N N 115 CYS C O doub N N 116 CYS C OXT sing N N 117 CYS CB SG sing N N 118 CYS CB HB2 sing N N 119 CYS CB HB3 sing N N 120 CYS SG HG sing N N 121 CYS OXT HXT sing N N 122 DA OP3 P sing N N 123 DA OP3 HOP3 sing N N 124 DA P OP1 doub N N 125 DA P OP2 sing N N 126 DA P "O5'" sing N N 127 DA OP2 HOP2 sing N N 128 DA "O5'" "C5'" sing N N 129 DA "C5'" "C4'" sing N N 130 DA "C5'" "H5'" sing N N 131 DA "C5'" "H5''" sing N N 132 DA "C4'" "O4'" sing N N 133 DA "C4'" "C3'" sing N N 134 DA "C4'" "H4'" sing N N 135 DA "O4'" "C1'" sing N N 136 DA "C3'" "O3'" sing N N 137 DA "C3'" "C2'" sing N N 138 DA "C3'" "H3'" sing N N 139 DA "O3'" "HO3'" sing N N 140 DA "C2'" "C1'" sing N N 141 DA "C2'" "H2'" sing N N 142 DA "C2'" "H2''" sing N N 143 DA "C1'" N9 sing N N 144 DA "C1'" "H1'" sing N N 145 DA N9 C8 sing Y N 146 DA N9 C4 sing Y N 147 DA C8 N7 doub Y N 148 DA C8 H8 sing N N 149 DA N7 C5 sing Y N 150 DA C5 C6 sing Y N 151 DA C5 C4 doub Y N 152 DA C6 N6 sing N N 153 DA C6 N1 doub Y N 154 DA N6 H61 sing N N 155 DA N6 H62 sing N N 156 DA N1 C2 sing Y N 157 DA C2 N3 doub Y N 158 DA C2 H2 sing N N 159 DA N3 C4 sing Y N 160 DC OP3 P sing N N 161 DC OP3 HOP3 sing N N 162 DC P OP1 doub N N 163 DC P OP2 sing N N 164 DC P "O5'" sing N N 165 DC OP2 HOP2 sing N N 166 DC "O5'" "C5'" sing N N 167 DC "C5'" "C4'" sing N N 168 DC "C5'" "H5'" sing N N 169 DC "C5'" "H5''" sing N N 170 DC "C4'" "O4'" sing N N 171 DC "C4'" "C3'" sing N N 172 DC "C4'" "H4'" sing N N 173 DC "O4'" "C1'" sing N N 174 DC "C3'" "O3'" sing N N 175 DC "C3'" "C2'" sing N N 176 DC "C3'" "H3'" sing N N 177 DC "O3'" "HO3'" sing N N 178 DC "C2'" "C1'" sing N N 179 DC "C2'" "H2'" sing N N 180 DC "C2'" "H2''" sing N N 181 DC "C1'" N1 sing N N 182 DC "C1'" "H1'" sing N N 183 DC N1 C2 sing N N 184 DC N1 C6 sing N N 185 DC C2 O2 doub N N 186 DC C2 N3 sing N N 187 DC N3 C4 doub N N 188 DC C4 N4 sing N N 189 DC C4 C5 sing N N 190 DC N4 H41 sing N N 191 DC N4 H42 sing N N 192 DC C5 C6 doub N N 193 DC C5 H5 sing N N 194 DC C6 H6 sing N N 195 DG OP3 P sing N N 196 DG OP3 HOP3 sing N N 197 DG P OP1 doub N N 198 DG P OP2 sing N N 199 DG P "O5'" sing N N 200 DG OP2 HOP2 sing N N 201 DG "O5'" "C5'" sing N N 202 DG "C5'" "C4'" sing N N 203 DG "C5'" "H5'" sing N N 204 DG "C5'" "H5''" sing N N 205 DG "C4'" "O4'" sing N N 206 DG "C4'" "C3'" sing N N 207 DG "C4'" "H4'" sing N N 208 DG "O4'" "C1'" sing N N 209 DG "C3'" "O3'" sing N N 210 DG "C3'" "C2'" sing N N 211 DG "C3'" "H3'" sing N N 212 DG "O3'" "HO3'" sing N N 213 DG "C2'" "C1'" sing N N 214 DG "C2'" "H2'" sing N N 215 DG "C2'" "H2''" sing N N 216 DG "C1'" N9 sing N N 217 DG "C1'" "H1'" sing N N 218 DG N9 C8 sing Y N 219 DG N9 C4 sing Y N 220 DG C8 N7 doub Y N 221 DG C8 H8 sing N N 222 DG N7 C5 sing Y N 223 DG C5 C6 sing N N 224 DG C5 C4 doub Y N 225 DG C6 O6 doub N N 226 DG C6 N1 sing N N 227 DG N1 C2 sing N N 228 DG N1 H1 sing N N 229 DG C2 N2 sing N N 230 DG C2 N3 doub N N 231 DG N2 H21 sing N N 232 DG N2 H22 sing N N 233 DG N3 C4 sing N N 234 DT OP3 P sing N N 235 DT OP3 HOP3 sing N N 236 DT P OP1 doub N N 237 DT P OP2 sing N N 238 DT P "O5'" sing N N 239 DT OP2 HOP2 sing N N 240 DT "O5'" "C5'" sing N N 241 DT "C5'" "C4'" sing N N 242 DT "C5'" "H5'" sing N N 243 DT "C5'" "H5''" sing N N 244 DT "C4'" "O4'" sing N N 245 DT "C4'" "C3'" sing N N 246 DT "C4'" "H4'" sing N N 247 DT "O4'" "C1'" sing N N 248 DT "C3'" "O3'" sing N N 249 DT "C3'" "C2'" sing N N 250 DT "C3'" "H3'" sing N N 251 DT "O3'" "HO3'" sing N N 252 DT "C2'" "C1'" sing N N 253 DT "C2'" "H2'" sing N N 254 DT "C2'" "H2''" sing N N 255 DT "C1'" N1 sing N N 256 DT "C1'" "H1'" sing N N 257 DT N1 C2 sing N N 258 DT N1 C6 sing N N 259 DT C2 O2 doub N N 260 DT C2 N3 sing N N 261 DT N3 C4 sing N N 262 DT N3 H3 sing N N 263 DT C4 O4 doub N N 264 DT C4 C5 sing N N 265 DT C5 C7 sing N N 266 DT C5 C6 doub N N 267 DT C7 H71 sing N N 268 DT C7 H72 sing N N 269 DT C7 H73 sing N N 270 DT C6 H6 sing N N 271 GLN N CA sing N N 272 GLN N H sing N N 273 GLN N H2 sing N N 274 GLN CA C sing N N 275 GLN CA CB sing N N 276 GLN CA HA sing N N 277 GLN C O doub N N 278 GLN C OXT sing N N 279 GLN CB CG sing N N 280 GLN CB HB2 sing N N 281 GLN CB HB3 sing N N 282 GLN CG CD sing N N 283 GLN CG HG2 sing N N 284 GLN CG HG3 sing N N 285 GLN CD OE1 doub N N 286 GLN CD NE2 sing N N 287 GLN NE2 HE21 sing N N 288 GLN NE2 HE22 sing N N 289 GLN OXT HXT sing N N 290 GLU N CA sing N N 291 GLU N H sing N N 292 GLU N H2 sing N N 293 GLU CA C sing N N 294 GLU CA CB sing N N 295 GLU CA HA sing N N 296 GLU C O doub N N 297 GLU C OXT sing N N 298 GLU CB CG sing N N 299 GLU CB HB2 sing N N 300 GLU CB HB3 sing N N 301 GLU CG CD sing N N 302 GLU CG HG2 sing N N 303 GLU CG HG3 sing N N 304 GLU CD OE1 doub N N 305 GLU CD OE2 sing N N 306 GLU OE2 HE2 sing N N 307 GLU OXT HXT sing N N 308 GLY N CA sing N N 309 GLY N H sing N N 310 GLY N H2 sing N N 311 GLY CA C sing N N 312 GLY CA HA2 sing N N 313 GLY CA HA3 sing N N 314 GLY C O doub N N 315 GLY C OXT sing N N 316 GLY OXT HXT sing N N 317 HIS N CA sing N N 318 HIS N H sing N N 319 HIS N H2 sing N N 320 HIS CA C sing N N 321 HIS CA CB sing N N 322 HIS CA HA sing N N 323 HIS C O doub N N 324 HIS C OXT sing N N 325 HIS CB CG sing N N 326 HIS CB HB2 sing N N 327 HIS CB HB3 sing N N 328 HIS CG ND1 sing Y N 329 HIS CG CD2 doub Y N 330 HIS ND1 CE1 doub Y N 331 HIS ND1 HD1 sing N N 332 HIS CD2 NE2 sing Y N 333 HIS CD2 HD2 sing N N 334 HIS CE1 NE2 sing Y N 335 HIS CE1 HE1 sing N N 336 HIS NE2 HE2 sing N N 337 HIS OXT HXT sing N N 338 HOH O H1 sing N N 339 HOH O H2 sing N N 340 ILE N CA sing N N 341 ILE N H sing N N 342 ILE N H2 sing N N 343 ILE CA C sing N N 344 ILE CA CB sing N N 345 ILE CA HA sing N N 346 ILE C O doub N N 347 ILE C OXT sing N N 348 ILE CB CG1 sing N N 349 ILE CB CG2 sing N N 350 ILE CB HB sing N N 351 ILE CG1 CD1 sing N N 352 ILE CG1 HG12 sing N N 353 ILE CG1 HG13 sing N N 354 ILE CG2 HG21 sing N N 355 ILE CG2 HG22 sing N N 356 ILE CG2 HG23 sing N N 357 ILE CD1 HD11 sing N N 358 ILE CD1 HD12 sing N N 359 ILE CD1 HD13 sing N N 360 ILE OXT HXT sing N N 361 LEU N CA sing N N 362 LEU N H sing N N 363 LEU N H2 sing N N 364 LEU CA C sing N N 365 LEU CA CB sing N N 366 LEU CA HA sing N N 367 LEU C O doub N N 368 LEU C OXT sing N N 369 LEU CB CG sing N N 370 LEU CB HB2 sing N N 371 LEU CB HB3 sing N N 372 LEU CG CD1 sing N N 373 LEU CG CD2 sing N N 374 LEU CG HG sing N N 375 LEU CD1 HD11 sing N N 376 LEU CD1 HD12 sing N N 377 LEU CD1 HD13 sing N N 378 LEU CD2 HD21 sing N N 379 LEU CD2 HD22 sing N N 380 LEU CD2 HD23 sing N N 381 LEU OXT HXT sing N N 382 LYS N CA sing N N 383 LYS N H sing N N 384 LYS N H2 sing N N 385 LYS CA C sing N N 386 LYS CA CB sing N N 387 LYS CA HA sing N N 388 LYS C O doub N N 389 LYS C OXT sing N N 390 LYS CB CG sing N N 391 LYS CB HB2 sing N N 392 LYS CB HB3 sing N N 393 LYS CG CD sing N N 394 LYS CG HG2 sing N N 395 LYS CG HG3 sing N N 396 LYS CD CE sing N N 397 LYS CD HD2 sing N N 398 LYS CD HD3 sing N N 399 LYS CE NZ sing N N 400 LYS CE HE2 sing N N 401 LYS CE HE3 sing N N 402 LYS NZ HZ1 sing N N 403 LYS NZ HZ2 sing N N 404 LYS NZ HZ3 sing N N 405 LYS OXT HXT sing N N 406 MET N CA sing N N 407 MET N H sing N N 408 MET N H2 sing N N 409 MET CA C sing N N 410 MET CA CB sing N N 411 MET CA HA sing N N 412 MET C O doub N N 413 MET C OXT sing N N 414 MET CB CG sing N N 415 MET CB HB2 sing N N 416 MET CB HB3 sing N N 417 MET CG SD sing N N 418 MET CG HG2 sing N N 419 MET CG HG3 sing N N 420 MET SD CE sing N N 421 MET CE HE1 sing N N 422 MET CE HE2 sing N N 423 MET CE HE3 sing N N 424 MET OXT HXT sing N N 425 PEG C1 O1 sing N N 426 PEG C1 C2 sing N N 427 PEG C1 H11 sing N N 428 PEG C1 H12 sing N N 429 PEG O1 HO1 sing N N 430 PEG C2 O2 sing N N 431 PEG C2 H21 sing N N 432 PEG C2 H22 sing N N 433 PEG O2 C3 sing N N 434 PEG C3 C4 sing N N 435 PEG C3 H31 sing N N 436 PEG C3 H32 sing N N 437 PEG C4 O4 sing N N 438 PEG C4 H41 sing N N 439 PEG C4 H42 sing N N 440 PEG O4 HO4 sing N N 441 PHE N CA sing N N 442 PHE N H sing N N 443 PHE N H2 sing N N 444 PHE CA C sing N N 445 PHE CA CB sing N N 446 PHE CA HA sing N N 447 PHE C O doub N N 448 PHE C OXT sing N N 449 PHE CB CG sing N N 450 PHE CB HB2 sing N N 451 PHE CB HB3 sing N N 452 PHE CG CD1 doub Y N 453 PHE CG CD2 sing Y N 454 PHE CD1 CE1 sing Y N 455 PHE CD1 HD1 sing N N 456 PHE CD2 CE2 doub Y N 457 PHE CD2 HD2 sing N N 458 PHE CE1 CZ doub Y N 459 PHE CE1 HE1 sing N N 460 PHE CE2 CZ sing Y N 461 PHE CE2 HE2 sing N N 462 PHE CZ HZ sing N N 463 PHE OXT HXT sing N N 464 PRO N CA sing N N 465 PRO N CD sing N N 466 PRO N H sing N N 467 PRO CA C sing N N 468 PRO CA CB sing N N 469 PRO CA HA sing N N 470 PRO C O doub N N 471 PRO C OXT sing N N 472 PRO CB CG sing N N 473 PRO CB HB2 sing N N 474 PRO CB HB3 sing N N 475 PRO CG CD sing N N 476 PRO CG HG2 sing N N 477 PRO CG HG3 sing N N 478 PRO CD HD2 sing N N 479 PRO CD HD3 sing N N 480 PRO OXT HXT sing N N 481 SER N CA sing N N 482 SER N H sing N N 483 SER N H2 sing N N 484 SER CA C sing N N 485 SER CA CB sing N N 486 SER CA HA sing N N 487 SER C O doub N N 488 SER C OXT sing N N 489 SER CB OG sing N N 490 SER CB HB2 sing N N 491 SER CB HB3 sing N N 492 SER OG HG sing N N 493 SER OXT HXT sing N N 494 THR N CA sing N N 495 THR N H sing N N 496 THR N H2 sing N N 497 THR CA C sing N N 498 THR CA CB sing N N 499 THR CA HA sing N N 500 THR C O doub N N 501 THR C OXT sing N N 502 THR CB OG1 sing N N 503 THR CB CG2 sing N N 504 THR CB HB sing N N 505 THR OG1 HG1 sing N N 506 THR CG2 HG21 sing N N 507 THR CG2 HG22 sing N N 508 THR CG2 HG23 sing N N 509 THR OXT HXT sing N N 510 TRP N CA sing N N 511 TRP N H sing N N 512 TRP N H2 sing N N 513 TRP CA C sing N N 514 TRP CA CB sing N N 515 TRP CA HA sing N N 516 TRP C O doub N N 517 TRP C OXT sing N N 518 TRP CB CG sing N N 519 TRP CB HB2 sing N N 520 TRP CB HB3 sing N N 521 TRP CG CD1 doub Y N 522 TRP CG CD2 sing Y N 523 TRP CD1 NE1 sing Y N 524 TRP CD1 HD1 sing N N 525 TRP CD2 CE2 doub Y N 526 TRP CD2 CE3 sing Y N 527 TRP NE1 CE2 sing Y N 528 TRP NE1 HE1 sing N N 529 TRP CE2 CZ2 sing Y N 530 TRP CE3 CZ3 doub Y N 531 TRP CE3 HE3 sing N N 532 TRP CZ2 CH2 doub Y N 533 TRP CZ2 HZ2 sing N N 534 TRP CZ3 CH2 sing Y N 535 TRP CZ3 HZ3 sing N N 536 TRP CH2 HH2 sing N N 537 TRP OXT HXT sing N N 538 TTP PA O1A doub N N 539 TTP PA O2A sing N N 540 TTP PA O3A sing N N 541 TTP PA "O5'" sing N N 542 TTP O2A HOA2 sing N N 543 TTP O3A PB sing N N 544 TTP PB O1B doub N N 545 TTP PB O2B sing N N 546 TTP PB O3B sing N N 547 TTP O2B HOB2 sing N N 548 TTP O3B PG sing N N 549 TTP PG O1G doub N N 550 TTP PG O2G sing N N 551 TTP PG O3G sing N N 552 TTP O2G HOG2 sing N N 553 TTP O3G HOG3 sing N N 554 TTP "O5'" "C5'" sing N N 555 TTP "C5'" "C4'" sing N N 556 TTP "C5'" "H5'1" sing N N 557 TTP "C5'" "H5'2" sing N N 558 TTP "C4'" "O4'" sing N N 559 TTP "C4'" "C3'" sing N N 560 TTP "C4'" "H4'" sing N N 561 TTP "O4'" "C1'" sing N N 562 TTP "C3'" "O3'" sing N N 563 TTP "C3'" "C2'" sing N N 564 TTP "C3'" "H3'" sing N N 565 TTP "O3'" "HO3'" sing N N 566 TTP "C2'" "C1'" sing N N 567 TTP "C2'" "H2'1" sing N N 568 TTP "C2'" "H2'2" sing N N 569 TTP "C1'" N1 sing N N 570 TTP "C1'" "H1'" sing N N 571 TTP N1 C2 sing N N 572 TTP N1 C6 sing N N 573 TTP C2 O2 doub N N 574 TTP C2 N3 sing N N 575 TTP N3 C4 sing N N 576 TTP N3 HN3 sing N N 577 TTP C4 O4 doub N N 578 TTP C4 C5 sing N N 579 TTP C5 C5M sing N N 580 TTP C5 C6 doub N N 581 TTP C5M HM51 sing N N 582 TTP C5M HM52 sing N N 583 TTP C5M HM53 sing N N 584 TTP C6 H6 sing N N 585 TYR N CA sing N N 586 TYR N H sing N N 587 TYR N H2 sing N N 588 TYR CA C sing N N 589 TYR CA CB sing N N 590 TYR CA HA sing N N 591 TYR C O doub N N 592 TYR C OXT sing N N 593 TYR CB CG sing N N 594 TYR CB HB2 sing N N 595 TYR CB HB3 sing N N 596 TYR CG CD1 doub Y N 597 TYR CG CD2 sing Y N 598 TYR CD1 CE1 sing Y N 599 TYR CD1 HD1 sing N N 600 TYR CD2 CE2 doub Y N 601 TYR CD2 HD2 sing N N 602 TYR CE1 CZ doub Y N 603 TYR CE1 HE1 sing N N 604 TYR CE2 CZ sing Y N 605 TYR CE2 HE2 sing N N 606 TYR CZ OH sing N N 607 TYR OH HH sing N N 608 TYR OXT HXT sing N N 609 VAL N CA sing N N 610 VAL N H sing N N 611 VAL N H2 sing N N 612 VAL CA C sing N N 613 VAL CA CB sing N N 614 VAL CA HA sing N N 615 VAL C O doub N N 616 VAL C OXT sing N N 617 VAL CB CG1 sing N N 618 VAL CB CG2 sing N N 619 VAL CB HB sing N N 620 VAL CG1 HG11 sing N N 621 VAL CG1 HG12 sing N N 622 VAL CG1 HG13 sing N N 623 VAL CG2 HG21 sing N N 624 VAL CG2 HG22 sing N N 625 VAL CG2 HG23 sing N N 626 VAL OXT HXT sing N N 627 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5VRW 'double helix' 5VRW 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 C DG 5 1_555 3.922 0.586 -0.242 -25.234 4.931 -89.615 1 T_DC1:DG5_D T 1 ? D 5 ? 19 1 1 A DC 2 1_555 C DG 4 1_555 -1.029 0.513 -0.625 16.118 -13.723 -5.616 2 T_DC2:DG4_D T 2 ? D 4 ? 19 1 1 A DG 3 1_555 C DC 3 1_555 -0.365 0.000 -0.100 7.189 -18.856 -4.562 3 T_DG3:DC3_D T 3 ? D 3 ? 19 1 1 A DA 4 1_555 C DT 2 1_555 -0.056 0.034 -0.020 9.763 -13.553 -3.137 4 T_DA4:DT2_D T 4 ? D 2 ? 20 1 1 A DC 5 1_555 C DG 1 1_555 0.203 0.069 -0.422 21.483 1.083 -0.262 5 T_DC5:DG1_D T 5 ? D 1 ? 19 1 1 A 8OG 7 1_555 B DC 10 1_555 -0.358 -0.035 0.312 -8.469 -13.998 5.255 6 T_8OG7:DC10_P T 7 ? P 10 ? 19 1 1 A DG 8 1_555 B DC 9 1_555 -0.187 0.173 0.025 4.916 -10.297 8.278 7 T_DG8:DC9_P T 8 ? P 9 ? 19 1 1 A DC 9 1_555 B DG 8 1_555 -0.038 0.165 0.247 -2.247 -8.115 -1.889 8 T_DC9:DG8_P T 9 ? P 8 ? 19 1 1 A DG 10 1_555 B DC 7 1_555 -0.037 0.067 0.497 10.015 -11.422 -0.007 9 T_DG10:DC7_P T 10 ? P 7 ? 19 1 1 A DC 11 1_555 B DG 6 1_555 0.020 0.219 -0.029 4.729 -8.587 2.887 10 T_DC11:DG6_P T 11 ? P 6 ? 19 1 1 A DA 12 1_555 B DT 5 1_555 0.011 0.175 -0.098 -3.001 -12.182 4.597 11 T_DA12:DT5_P T 12 ? P 5 ? 20 1 1 A DT 13 1_555 B DA 4 1_555 0.190 -0.044 0.066 -3.400 -14.585 0.012 12 T_DT13:DA4_P T 13 ? P 4 ? 20 1 1 A DC 14 1_555 B DG 3 1_555 0.368 -0.098 0.131 -3.488 -14.640 -0.543 13 T_DC14:DG3_P T 14 ? P 3 ? 19 1 1 A DA 15 1_555 B DT 2 1_555 0.434 -0.158 -0.246 -0.879 -13.016 -4.314 14 T_DA15:DT2_P T 15 ? P 2 ? 20 1 1 A DG 16 1_555 B DC 1 1_555 0.026 0.172 0.659 19.543 -18.970 4.729 15 T_DG16:DC1_P T 16 ? P 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 C DG 5 1_555 A DC 2 1_555 C DG 4 1_555 2.845 -0.145 2.435 1.319 -5.099 -19.637 2.047 8.484 2.135 14.615 3.779 -20.324 1 TT_DC1DC2:DG4DG5_DD T 1 ? D 5 ? T 2 ? D 4 ? 1 A DC 2 1_555 C DG 4 1_555 A DG 3 1_555 C DC 3 1_555 -0.107 -0.619 3.697 -1.301 10.491 32.441 -2.899 -0.046 3.343 18.186 2.256 34.076 2 TT_DC2DG3:DC3DG4_DD T 2 ? D 4 ? T 3 ? D 3 ? 1 A DG 3 1_555 C DC 3 1_555 A DA 4 1_555 C DT 2 1_555 0.106 0.124 3.153 0.605 0.854 34.894 0.082 -0.089 3.157 1.424 -1.009 34.910 3 TT_DG3DA4:DT2DC3_DD T 3 ? D 3 ? T 4 ? D 2 ? 1 A DA 4 1_555 C DT 2 1_555 A DC 5 1_555 C DG 1 1_555 1.140 -0.299 2.983 2.264 5.557 30.872 -1.506 -1.715 2.959 10.317 -4.203 31.436 4 TT_DA4DC5:DG1DT2_DD T 4 ? D 2 ? T 5 ? D 1 ? 1 A 8OG 7 1_555 B DC 10 1_555 A DG 8 1_555 B DC 9 1_555 0.353 0.060 3.008 1.370 4.805 33.679 -0.604 -0.401 2.999 8.237 -2.349 34.037 5 TT_8OG7DG8:DC9DC10_PP T 7 ? P 10 ? T 8 ? P 9 ? 1 A DG 8 1_555 B DC 9 1_555 A DC 9 1_555 B DG 8 1_555 -1.684 -0.195 3.449 -5.003 2.544 35.797 -0.703 1.945 3.622 4.108 8.077 36.220 6 TT_DG8DC9:DG8DC9_PP T 8 ? P 9 ? T 9 ? P 8 ? 1 A DC 9 1_555 B DG 8 1_555 A DG 10 1_555 B DC 7 1_555 0.016 -0.132 2.973 -1.806 5.795 31.564 -1.179 -0.322 2.898 10.532 3.282 32.128 7 TT_DC9DG10:DC7DG8_PP T 9 ? P 8 ? T 10 ? P 7 ? 1 A DG 10 1_555 B DC 7 1_555 A DC 11 1_555 B DG 6 1_555 0.682 -0.672 3.333 4.688 3.600 33.464 -1.740 -0.400 3.308 6.193 -8.063 33.967 8 TT_DG10DC11:DG6DC7_PP T 10 ? P 7 ? T 11 ? P 6 ? 1 A DC 11 1_555 B DG 6 1_555 A DA 12 1_555 B DT 5 1_555 0.192 -0.624 3.380 0.728 9.096 33.218 -2.488 -0.210 3.110 15.549 -1.244 34.414 9 TT_DC11DA12:DT5DG6_PP T 11 ? P 6 ? T 12 ? P 5 ? 1 A DA 12 1_555 B DT 5 1_555 A DT 13 1_555 B DA 4 1_555 -0.646 -0.554 3.309 -0.867 3.271 31.534 -1.618 1.021 3.252 5.997 1.589 31.710 10 TT_DA12DT13:DA4DT5_PP T 12 ? P 5 ? T 13 ? P 4 ? 1 A DT 13 1_555 B DA 4 1_555 A DC 14 1_555 B DG 3 1_555 0.051 -0.260 3.180 0.157 5.156 36.929 -1.068 -0.059 3.117 8.090 -0.247 37.275 11 TT_DT13DC14:DG3DA4_PP T 13 ? P 4 ? T 14 ? P 3 ? 1 A DC 14 1_555 B DG 3 1_555 A DA 15 1_555 B DT 2 1_555 -0.333 0.298 3.298 1.866 10.678 33.669 -1.123 0.831 3.218 17.869 -3.123 35.323 12 TT_DC14DA15:DT2DG3_PP T 14 ? P 3 ? T 15 ? P 2 ? 1 A DA 15 1_555 B DT 2 1_555 A DG 16 1_555 B DC 1 1_555 0.914 -0.517 2.718 -7.067 7.965 30.468 -2.041 -2.632 2.253 14.608 12.960 32.234 13 TT_DA15DG16:DC1DT2_PP T 15 ? P 2 ? T 16 ? P 1 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS)' 'United States' ES024585 1 'National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS)' 'United States' ES026821 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'CALCIUM ION' CA 6 "THYMIDINE-5'-TRIPHOSPHATE" TTP 7 'DI(HYDROXYETHYL)ETHER' PEG 8 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4RPX _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #