HEADER OXIDOREDUCTASE 25-MAY-17 5VYO TITLE THE COMPLEX STRUCTURE OF BURKHOLDERIA PSEUDOMALLEI DSBA BOUND TO A TITLE 2 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOL:DISULFIDE INTERCHANGE PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: DISULFIDE BOND PROTEIN A; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DISULFIDE BOND FORMATION PROTEIN B; COMPND 9 CHAIN: E, F, G, H; COMPND 10 FRAGMENT: UNP RESIDUES 99-104; COMPND 11 SYNONYM: DISULFIDE OXIDOREDUCTASE; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI; SOURCE 3 ORGANISM_TAXID: 272560; SOURCE 4 STRAIN: K96243; SOURCE 5 GENE: DSBA, BPSL0381; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21A; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI; SOURCE 14 ORGANISM_TAXID: 28450 KEYWDS THIOREDOXIN, OXIDOREDUCTASE, COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.M.MCMAHON,J.L.MARTIN REVDAT 5 04-OCT-23 5VYO 1 REMARK REVDAT 4 08-JAN-20 5VYO 1 REMARK REVDAT 3 09-MAY-18 5VYO 1 JRNL REVDAT 2 28-MAR-18 5VYO 1 JRNL REVDAT 1 21-MAR-18 5VYO 0 JRNL AUTH R.M.MCMAHON,P.M.IRELAND,D.S.SAROVICH,G.PETIT,C.H.JENKINS, JRNL AUTH 2 M.SARKAR-TYSON,B.J.CURRIE,J.L.MARTIN JRNL TITL VIRULENCE OF THE MELIOIDOSIS PATHOGEN BURKHOLDERIA JRNL TITL 2 PSEUDOMALLEI REQUIRES THE OXIDOREDUCTASE MEMBRANE PROTEIN JRNL TITL 3 DSBB. JRNL REF INFECT. IMMUN. V. 86 2018 JRNL REFN ESSN 1098-5522 JRNL PMID 29440370 JRNL DOI 10.1128/IAI.00938-17 REMARK 2 REMARK 2 RESOLUTION. 2.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 29095 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1472 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.3144 - 5.5333 0.98 2563 121 0.1824 0.2136 REMARK 3 2 5.5333 - 4.3935 0.99 2557 154 0.1602 0.2106 REMARK 3 3 4.3935 - 3.8386 0.97 2519 159 0.1594 0.2085 REMARK 3 4 3.8386 - 3.4878 0.98 2559 121 0.1762 0.2294 REMARK 3 5 3.4878 - 3.2380 0.98 2530 134 0.2035 0.2801 REMARK 3 6 3.2380 - 3.0471 0.99 2565 139 0.2171 0.2946 REMARK 3 7 3.0471 - 2.8946 0.98 2553 134 0.2254 0.2979 REMARK 3 8 2.8946 - 2.7686 0.98 2578 123 0.2254 0.3104 REMARK 3 9 2.7686 - 2.6620 0.98 2553 144 0.2426 0.2980 REMARK 3 10 2.6620 - 2.5702 0.98 2557 115 0.2478 0.3163 REMARK 3 11 2.5702 - 2.4898 0.81 2089 128 0.2717 0.3378 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.03 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 6296 REMARK 3 ANGLE : 0.487 8540 REMARK 3 CHIRALITY : 0.042 924 REMARK 3 PLANARITY : 0.004 1102 REMARK 3 DIHEDRAL : 12.221 3764 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 31 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 9 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.2231 10.8896 -6.7753 REMARK 3 T TENSOR REMARK 3 T11: 0.2981 T22: 0.3401 REMARK 3 T33: 0.3006 T12: 0.0973 REMARK 3 T13: 0.0683 T23: -0.0194 REMARK 3 L TENSOR REMARK 3 L11: 6.3517 L22: 5.3937 REMARK 3 L33: 6.0144 L12: -0.6590 REMARK 3 L13: -0.1771 L23: 0.2186 REMARK 3 S TENSOR REMARK 3 S11: 0.4799 S12: 0.8938 S13: -0.3096 REMARK 3 S21: -0.9050 S22: -0.0179 S23: -0.3731 REMARK 3 S31: 0.3155 S32: 0.5605 S33: -0.1168 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 19 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.6542 17.5885 3.4205 REMARK 3 T TENSOR REMARK 3 T11: 0.2785 T22: 0.1474 REMARK 3 T33: 0.1927 T12: -0.0449 REMARK 3 T13: -0.0160 T23: 0.0070 REMARK 3 L TENSOR REMARK 3 L11: 3.1612 L22: 1.0361 REMARK 3 L33: 1.4403 L12: -1.3170 REMARK 3 L13: 0.5476 L23: -0.5177 REMARK 3 S TENSOR REMARK 3 S11: 0.0217 S12: 0.1556 S13: -0.2514 REMARK 3 S21: -0.0977 S22: 0.0568 S23: -0.3164 REMARK 3 S31: -0.1856 S32: -0.0340 S33: 0.0123 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 50 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.4165 11.7841 10.9926 REMARK 3 T TENSOR REMARK 3 T11: 0.2583 T22: 0.1505 REMARK 3 T33: 0.1112 T12: -0.0508 REMARK 3 T13: 0.0223 T23: 0.0327 REMARK 3 L TENSOR REMARK 3 L11: 5.5973 L22: 4.4540 REMARK 3 L33: 4.2035 L12: -1.5523 REMARK 3 L13: 1.5052 L23: -0.1075 REMARK 3 S TENSOR REMARK 3 S11: -0.1002 S12: -0.4052 S13: -0.0662 REMARK 3 S21: 0.4475 S22: 0.1412 S23: -0.2335 REMARK 3 S31: -0.0791 S32: -0.0231 S33: -0.0898 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 71 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): -52.2233 22.0482 4.2713 REMARK 3 T TENSOR REMARK 3 T11: 0.1879 T22: 0.1715 REMARK 3 T33: 0.2169 T12: 0.0076 REMARK 3 T13: -0.0128 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 4.0976 L22: 6.3164 REMARK 3 L33: 3.7094 L12: 0.9575 REMARK 3 L13: -1.1258 L23: 1.1793 REMARK 3 S TENSOR REMARK 3 S11: 0.0312 S12: 0.2296 S13: 0.2215 REMARK 3 S21: -0.3926 S22: 0.0668 S23: 0.1604 REMARK 3 S31: -0.2317 S32: -0.1247 S33: -0.1225 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 91 THROUGH 123 ) REMARK 3 ORIGIN FOR THE GROUP (A): -57.6851 12.7207 8.7287 REMARK 3 T TENSOR REMARK 3 T11: 0.1738 T22: 0.1515 REMARK 3 T33: 0.1722 T12: -0.0466 REMARK 3 T13: -0.0106 T23: 0.0486 REMARK 3 L TENSOR REMARK 3 L11: 2.9043 L22: 6.2423 REMARK 3 L33: 3.9899 L12: 0.6504 REMARK 3 L13: -1.3673 L23: 0.8574 REMARK 3 S TENSOR REMARK 3 S11: 0.0486 S12: -0.2551 S13: -0.0640 REMARK 3 S21: 0.2180 S22: -0.1121 S23: 0.1138 REMARK 3 S31: 0.2401 S32: 0.0311 S33: 0.0483 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 124 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): -59.8191 23.0421 15.7147 REMARK 3 T TENSOR REMARK 3 T11: 0.3535 T22: 0.2937 REMARK 3 T33: 0.2396 T12: -0.0059 REMARK 3 T13: 0.0616 T23: 0.0046 REMARK 3 L TENSOR REMARK 3 L11: 3.7547 L22: 7.1107 REMARK 3 L33: 3.8745 L12: 1.1773 REMARK 3 L13: -1.2146 L23: -0.7531 REMARK 3 S TENSOR REMARK 3 S11: 0.0818 S12: -0.5781 S13: 0.2623 REMARK 3 S21: 1.1020 S22: 0.0470 S23: 0.9155 REMARK 3 S31: -0.0502 S32: -0.1950 S33: -0.1360 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 138 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): -45.8619 30.0076 4.5120 REMARK 3 T TENSOR REMARK 3 T11: 0.3363 T22: 0.1323 REMARK 3 T33: 0.3665 T12: -0.0540 REMARK 3 T13: -0.1064 T23: -0.0200 REMARK 3 L TENSOR REMARK 3 L11: 4.0030 L22: 3.5510 REMARK 3 L33: 2.1564 L12: -2.6570 REMARK 3 L13: -0.6579 L23: 1.2335 REMARK 3 S TENSOR REMARK 3 S11: 0.0220 S12: 0.3690 S13: 0.3781 REMARK 3 S21: -0.3057 S22: -0.1185 S23: 0.4824 REMARK 3 S31: -0.2913 S32: -0.0214 S33: -0.1637 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 154 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.5665 16.3820 -2.5791 REMARK 3 T TENSOR REMARK 3 T11: 0.2661 T22: 0.1866 REMARK 3 T33: 0.1383 T12: -0.0028 REMARK 3 T13: -0.0151 T23: -0.0129 REMARK 3 L TENSOR REMARK 3 L11: 3.1519 L22: 6.2953 REMARK 3 L33: 1.5897 L12: -0.1535 REMARK 3 L13: -0.9571 L23: 1.3884 REMARK 3 S TENSOR REMARK 3 S11: -0.0190 S12: 0.2603 S13: 0.1242 REMARK 3 S21: -0.3706 S22: -0.0553 S23: -0.0221 REMARK 3 S31: -0.0552 S32: 0.1154 S33: 0.1565 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 178 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.6510 10.5171 3.6588 REMARK 3 T TENSOR REMARK 3 T11: 0.1733 T22: 0.1639 REMARK 3 T33: 0.3383 T12: 0.0102 REMARK 3 T13: -0.0486 T23: 0.0242 REMARK 3 L TENSOR REMARK 3 L11: 4.9160 L22: 5.6775 REMARK 3 L33: 3.4037 L12: 0.6152 REMARK 3 L13: -1.0295 L23: 0.3181 REMARK 3 S TENSOR REMARK 3 S11: 0.1974 S12: 0.0062 S13: -0.1864 REMARK 3 S21: 0.0466 S22: -0.1792 S23: -0.9842 REMARK 3 S31: 0.2885 S32: 0.4958 S33: 0.0483 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 9 THROUGH 43 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.7179 3.5635 -26.5721 REMARK 3 T TENSOR REMARK 3 T11: 0.2339 T22: 0.1438 REMARK 3 T33: 0.2071 T12: -0.0229 REMARK 3 T13: -0.0483 T23: 0.0539 REMARK 3 L TENSOR REMARK 3 L11: 2.2747 L22: 4.3419 REMARK 3 L33: 3.6187 L12: 0.0588 REMARK 3 L13: -1.4423 L23: -0.2751 REMARK 3 S TENSOR REMARK 3 S11: -0.1665 S12: 0.0567 S13: -0.1988 REMARK 3 S21: -0.2142 S22: 0.0617 S23: -0.1470 REMARK 3 S31: 0.1635 S32: 0.1193 S33: 0.1211 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 44 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): -53.6659 13.0490 -28.2040 REMARK 3 T TENSOR REMARK 3 T11: 0.1314 T22: 0.1766 REMARK 3 T33: 0.2255 T12: -0.0446 REMARK 3 T13: -0.0139 T23: 0.0096 REMARK 3 L TENSOR REMARK 3 L11: 2.6131 L22: 5.5938 REMARK 3 L33: 4.5027 L12: -1.2616 REMARK 3 L13: -1.4674 L23: 0.3649 REMARK 3 S TENSOR REMARK 3 S11: 0.0913 S12: -0.0196 S13: 0.2102 REMARK 3 S21: -0.2670 S22: 0.0974 S23: 0.1448 REMARK 3 S31: -0.0193 S32: -0.0121 S33: -0.1735 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 71 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): -67.3965 10.9181 -15.0535 REMARK 3 T TENSOR REMARK 3 T11: 0.1474 T22: 0.1446 REMARK 3 T33: 0.1285 T12: 0.0394 REMARK 3 T13: 0.0117 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 3.1758 L22: 5.6176 REMARK 3 L33: 2.8131 L12: 1.1678 REMARK 3 L13: 0.1990 L23: 0.8050 REMARK 3 S TENSOR REMARK 3 S11: 0.0408 S12: -0.0457 S13: 0.0708 REMARK 3 S21: 0.1801 S22: -0.0005 S23: 0.3569 REMARK 3 S31: -0.0292 S32: -0.2388 S33: -0.0366 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 138 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): -51.1114 1.4628 -20.9300 REMARK 3 T TENSOR REMARK 3 T11: 0.1979 T22: 0.1644 REMARK 3 T33: 0.1594 T12: 0.0197 REMARK 3 T13: -0.0214 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 3.0914 L22: 2.1187 REMARK 3 L33: 1.0630 L12: 1.0604 REMARK 3 L13: -1.2616 L23: -0.2289 REMARK 3 S TENSOR REMARK 3 S11: 0.0958 S12: 0.0558 S13: -0.3104 REMARK 3 S21: 0.0916 S22: -0.0970 S23: -0.1708 REMARK 3 S31: 0.2187 S32: 0.0706 S33: 0.0942 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 178 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.8478 9.1967 -34.1040 REMARK 3 T TENSOR REMARK 3 T11: 0.2426 T22: 0.2003 REMARK 3 T33: 0.3456 T12: 0.0141 REMARK 3 T13: 0.0153 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 3.3328 L22: 2.7491 REMARK 3 L33: 3.3526 L12: -0.2041 REMARK 3 L13: -2.1525 L23: 0.5992 REMARK 3 S TENSOR REMARK 3 S11: 0.0243 S12: 0.2061 S13: 0.1193 REMARK 3 S21: -0.4051 S22: 0.0436 S23: -0.5221 REMARK 3 S31: 0.1740 S32: 0.0299 S33: -0.0842 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 7 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): -70.8141 -14.4058 24.3532 REMARK 3 T TENSOR REMARK 3 T11: 0.4193 T22: 0.4704 REMARK 3 T33: 0.3129 T12: -0.0973 REMARK 3 T13: 0.1110 T23: 0.0680 REMARK 3 L TENSOR REMARK 3 L11: 7.2360 L22: 8.8917 REMARK 3 L33: 3.9893 L12: -0.4970 REMARK 3 L13: -1.2102 L23: -0.2033 REMARK 3 S TENSOR REMARK 3 S11: 0.2635 S12: -1.0804 S13: -0.4271 REMARK 3 S21: 0.8660 S22: 0.3040 S23: 0.8943 REMARK 3 S31: 0.6988 S32: -0.8579 S33: -0.1935 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 17 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): -55.7682 -11.8994 11.8168 REMARK 3 T TENSOR REMARK 3 T11: 0.2178 T22: 0.1819 REMARK 3 T33: 0.1510 T12: -0.0413 REMARK 3 T13: -0.0020 T23: 0.0204 REMARK 3 L TENSOR REMARK 3 L11: 4.6801 L22: 3.0774 REMARK 3 L33: 1.2037 L12: 0.2596 REMARK 3 L13: 0.1332 L23: 1.2571 REMARK 3 S TENSOR REMARK 3 S11: -0.1250 S12: 0.0422 S13: -0.0263 REMARK 3 S21: 0.2544 S22: 0.0424 S23: 0.2248 REMARK 3 S31: 0.0850 S32: -0.0500 S33: 0.1310 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 71 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.2416 -15.5365 9.0452 REMARK 3 T TENSOR REMARK 3 T11: 0.2147 T22: 0.1637 REMARK 3 T33: 0.1614 T12: 0.0256 REMARK 3 T13: -0.0196 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 2.9195 L22: 6.3192 REMARK 3 L33: 2.6425 L12: 0.1094 REMARK 3 L13: -0.4927 L23: 0.5374 REMARK 3 S TENSOR REMARK 3 S11: 0.0165 S12: 0.2893 S13: -0.2352 REMARK 3 S21: -0.3462 S22: -0.0051 S23: -0.3910 REMARK 3 S31: -0.0008 S32: 0.0316 S33: -0.0004 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 138 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.6314 -0.6538 13.4267 REMARK 3 T TENSOR REMARK 3 T11: 0.3545 T22: 0.2014 REMARK 3 T33: 0.2873 T12: -0.0041 REMARK 3 T13: -0.0314 T23: 0.0236 REMARK 3 L TENSOR REMARK 3 L11: 5.1739 L22: 1.9216 REMARK 3 L33: 3.6827 L12: 2.5082 REMARK 3 L13: -3.6445 L23: -1.7682 REMARK 3 S TENSOR REMARK 3 S11: -0.0530 S12: 0.0299 S13: 0.4625 REMARK 3 S21: 0.2243 S22: -0.0667 S23: -0.5058 REMARK 3 S31: -0.6985 S32: -0.1358 S33: 0.0506 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 154 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): -62.3188 -11.5184 17.3739 REMARK 3 T TENSOR REMARK 3 T11: 0.1994 T22: 0.2173 REMARK 3 T33: 0.2076 T12: 0.0090 REMARK 3 T13: 0.0507 T23: -0.0655 REMARK 3 L TENSOR REMARK 3 L11: 3.3651 L22: 5.1720 REMARK 3 L33: 3.5060 L12: 1.2854 REMARK 3 L13: 0.5829 L23: -0.4117 REMARK 3 S TENSOR REMARK 3 S11: -0.0457 S12: -0.1563 S13: 0.1293 REMARK 3 S21: 0.0395 S22: -0.0927 S23: 0.4249 REMARK 3 S31: -0.0944 S32: -0.1417 S33: 0.1355 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 10 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): -86.6214 -16.2485 -22.2652 REMARK 3 T TENSOR REMARK 3 T11: 0.1760 T22: 0.3396 REMARK 3 T33: 0.5807 T12: -0.0645 REMARK 3 T13: -0.0154 T23: -0.1125 REMARK 3 L TENSOR REMARK 3 L11: 2.0664 L22: 1.9247 REMARK 3 L33: 9.1914 L12: -1.4627 REMARK 3 L13: 0.3833 L23: -2.9843 REMARK 3 S TENSOR REMARK 3 S11: -0.0668 S12: -0.3203 S13: 0.2617 REMARK 3 S21: 0.0578 S22: -0.4744 S23: 0.1097 REMARK 3 S31: -0.2041 S32: -0.5567 S33: 0.7269 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 20 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): -69.6646 -19.3702 -21.1123 REMARK 3 T TENSOR REMARK 3 T11: 0.2002 T22: 0.1599 REMARK 3 T33: 0.1482 T12: 0.0238 REMARK 3 T13: -0.0445 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 2.2654 L22: 4.9677 REMARK 3 L33: 2.1345 L12: -0.2302 REMARK 3 L13: -1.6188 L23: 0.5996 REMARK 3 S TENSOR REMARK 3 S11: -0.0417 S12: -0.0288 S13: 0.0509 REMARK 3 S21: 0.2131 S22: 0.0084 S23: 0.2347 REMARK 3 S31: -0.0781 S32: 0.0264 S33: 0.0009 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 71 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): -58.9810 -21.0941 -31.6469 REMARK 3 T TENSOR REMARK 3 T11: 0.2444 T22: 0.1730 REMARK 3 T33: 0.1738 T12: -0.0143 REMARK 3 T13: -0.0044 T23: 0.0285 REMARK 3 L TENSOR REMARK 3 L11: 1.2557 L22: 6.0347 REMARK 3 L33: 1.3669 L12: -0.3293 REMARK 3 L13: -0.3100 L23: -2.6325 REMARK 3 S TENSOR REMARK 3 S11: 0.0039 S12: 0.0995 S13: -0.0508 REMARK 3 S21: 0.1205 S22: -0.0747 S23: -0.2422 REMARK 3 S31: -0.2107 S32: 0.2723 S33: 0.1432 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 106 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -51.8376 -17.2069 -37.2681 REMARK 3 T TENSOR REMARK 3 T11: 0.2165 T22: 0.1698 REMARK 3 T33: 0.1749 T12: -0.0559 REMARK 3 T13: -0.0281 T23: -0.0168 REMARK 3 L TENSOR REMARK 3 L11: 4.9529 L22: 8.3454 REMARK 3 L33: 3.4918 L12: -0.3944 REMARK 3 L13: 0.8711 L23: -1.9757 REMARK 3 S TENSOR REMARK 3 S11: -0.0363 S12: -0.0102 S13: 0.4982 REMARK 3 S21: -0.0577 S22: -0.2584 S23: -0.2632 REMARK 3 S31: -0.0761 S32: 0.2983 S33: 0.1333 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 125 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.6714 -28.1898 -31.5906 REMARK 3 T TENSOR REMARK 3 T11: 0.2457 T22: 0.2765 REMARK 3 T33: 0.3255 T12: 0.0370 REMARK 3 T13: -0.0572 T23: 0.0694 REMARK 3 L TENSOR REMARK 3 L11: 1.9482 L22: 8.6489 REMARK 3 L33: 4.1323 L12: 0.1870 REMARK 3 L13: 0.7220 L23: 0.4674 REMARK 3 S TENSOR REMARK 3 S11: 0.3620 S12: 0.0190 S13: -0.4740 REMARK 3 S21: 0.0721 S22: -0.0608 S23: -1.6532 REMARK 3 S31: 0.0274 S32: 0.5589 S33: 0.1648 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 138 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): -65.9894 -33.4401 -30.1696 REMARK 3 T TENSOR REMARK 3 T11: 0.2611 T22: 0.1873 REMARK 3 T33: 0.2147 T12: -0.0170 REMARK 3 T13: -0.0330 T23: 0.0285 REMARK 3 L TENSOR REMARK 3 L11: 3.5942 L22: 6.6252 REMARK 3 L33: 4.1806 L12: -4.4587 REMARK 3 L13: -2.1269 L23: 0.8383 REMARK 3 S TENSOR REMARK 3 S11: -0.5586 S12: -0.1038 S13: -0.0308 REMARK 3 S21: -0.3204 S22: 0.4625 S23: -0.1121 REMARK 3 S31: 0.3773 S32: -0.2082 S33: 0.0513 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 154 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): -76.7422 -23.2096 -25.3762 REMARK 3 T TENSOR REMARK 3 T11: 0.1845 T22: 0.1712 REMARK 3 T33: 0.2439 T12: 0.0177 REMARK 3 T13: 0.0672 T23: -0.0091 REMARK 3 L TENSOR REMARK 3 L11: 3.1423 L22: 8.3647 REMARK 3 L33: 4.6627 L12: -0.3442 REMARK 3 L13: 0.8751 L23: -0.8337 REMARK 3 S TENSOR REMARK 3 S11: -0.0355 S12: 0.0642 S13: -0.1775 REMARK 3 S21: -0.1174 S22: -0.1077 S23: -0.0881 REMARK 3 S31: -0.1451 S32: -0.2924 S33: 0.0825 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 168 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): -80.0230 -15.0272 -18.2709 REMARK 3 T TENSOR REMARK 3 T11: 0.2318 T22: 0.2597 REMARK 3 T33: 0.2700 T12: 0.0450 REMARK 3 T13: 0.0201 T23: -0.0598 REMARK 3 L TENSOR REMARK 3 L11: 3.7343 L22: 7.3039 REMARK 3 L33: 3.4496 L12: -0.0519 REMARK 3 L13: -0.2408 L23: -0.4389 REMARK 3 S TENSOR REMARK 3 S11: 0.0655 S12: -0.2386 S13: 0.3405 REMARK 3 S21: 0.6404 S22: 0.1091 S23: 0.5851 REMARK 3 S31: -0.3338 S32: -0.3309 S33: 0.0096 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 99 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.3326 10.5137 -12.1092 REMARK 3 T TENSOR REMARK 3 T11: 0.5682 T22: 0.3468 REMARK 3 T33: 0.4828 T12: -0.1222 REMARK 3 T13: -0.0582 T23: -0.1739 REMARK 3 L TENSOR REMARK 3 L11: 7.5049 L22: 3.2449 REMARK 3 L33: 1.7095 L12: -1.1886 REMARK 3 L13: -2.3752 L23: 0.3117 REMARK 3 S TENSOR REMARK 3 S11: -0.1152 S12: 0.0014 S13: -0.6100 REMARK 3 S21: 0.1376 S22: -0.6940 S23: 1.2103 REMARK 3 S31: 0.5342 S32: -0.6694 S33: 0.4409 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 99 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.5556 12.9561 -8.2799 REMARK 3 T TENSOR REMARK 3 T11: 0.5927 T22: 0.4941 REMARK 3 T33: 0.4858 T12: -0.0987 REMARK 3 T13: -0.0622 T23: -0.1043 REMARK 3 L TENSOR REMARK 3 L11: 3.9905 L22: 3.2340 REMARK 3 L33: 2.0006 L12: -2.0133 REMARK 3 L13: -3.1064 L23: -2.7109 REMARK 3 S TENSOR REMARK 3 S11: 0.4334 S12: -0.2896 S13: 0.5043 REMARK 3 S21: 0.5622 S22: -0.2916 S23: 0.3694 REMARK 3 S31: -1.1325 S32: -0.8260 S33: 0.4697 REMARK 3 TLS GROUP : 30 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 99 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.7001 -15.4041 26.3972 REMARK 3 T TENSOR REMARK 3 T11: 0.8439 T22: 0.5390 REMARK 3 T33: 0.5348 T12: 0.0555 REMARK 3 T13: -0.2217 T23: -0.0405 REMARK 3 L TENSOR REMARK 3 L11: 6.0792 L22: 1.9997 REMARK 3 L33: 3.7604 L12: 6.1663 REMARK 3 L13: 0.3831 L23: 4.2421 REMARK 3 S TENSOR REMARK 3 S11: -0.8112 S12: -0.2203 S13: 0.6291 REMARK 3 S21: -0.3071 S22: 0.5979 S23: -1.2502 REMARK 3 S31: -1.3511 S32: 0.8286 S33: 0.5218 REMARK 3 TLS GROUP : 31 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 99 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): -74.9995 -15.4224 -36.3584 REMARK 3 T TENSOR REMARK 3 T11: 0.6833 T22: 0.5296 REMARK 3 T33: 0.5118 T12: 0.1716 REMARK 3 T13: -0.1474 T23: 0.1943 REMARK 3 L TENSOR REMARK 3 L11: 2.0965 L22: 2.1430 REMARK 3 L33: 1.6382 L12: 0.2165 REMARK 3 L13: 0.1048 L23: 1.7428 REMARK 3 S TENSOR REMARK 3 S11: 0.2866 S12: 0.1316 S13: -0.3834 REMARK 3 S21: 0.5406 S22: -0.2511 S23: -0.6112 REMARK 3 S31: 0.6188 S32: 0.6454 S33: 0.1072 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VYO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1000228116. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95370 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.1.27 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29113 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.490 REMARK 200 RESOLUTION RANGE LOW (A) : 58.870 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.45400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.0 REMARK 200 STARTING MODEL: PDB ENTRY 4K2D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, PH 7.0, 0.5% V/V REMARK 280 JEFFAMINE ED-2001, 1.74 M SODIUM MALONATE, PH 7.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 ALA A 1 REMARK 465 GLY A 2 REMARK 465 PHE A 3 REMARK 465 ALA A 4 REMARK 465 GLN A 5 REMARK 465 ALA A 6 REMARK 465 SER A 7 REMARK 465 PRO A 8 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 ALA B 1 REMARK 465 GLY B 2 REMARK 465 PHE B 3 REMARK 465 ALA B 4 REMARK 465 GLN B 5 REMARK 465 ALA B 6 REMARK 465 SER B 7 REMARK 465 PRO B 8 REMARK 465 SER C -2 REMARK 465 ASN C -1 REMARK 465 ALA C 0 REMARK 465 ALA C 1 REMARK 465 GLY C 2 REMARK 465 PHE C 3 REMARK 465 ALA C 4 REMARK 465 GLN C 5 REMARK 465 ALA C 6 REMARK 465 SER D -2 REMARK 465 ASN D -1 REMARK 465 ALA D 0 REMARK 465 ALA D 1 REMARK 465 GLY D 2 REMARK 465 PHE D 3 REMARK 465 ALA D 4 REMARK 465 GLN D 5 REMARK 465 ALA D 6 REMARK 465 SER D 7 REMARK 465 PRO D 8 REMARK 465 SER D 9 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS D 15 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR C 168 OXT LEU C 197 1.56 REMARK 500 O PHE B 120 HG1 THR B 123 1.57 REMARK 500 O HOH A 237 O HOH A 263 2.09 REMARK 500 O HOH C 254 O HOH C 262 2.19 REMARK 500 O HOH A 252 O HOH A 257 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 15 -63.74 -124.04 REMARK 500 ALA A 30 -63.88 62.10 REMARK 500 LYS A 106 -32.96 -134.60 REMARK 500 LYS A 167 -30.85 -133.93 REMARK 500 LYS B 15 -54.46 -130.31 REMARK 500 SER B 177 143.40 -170.01 REMARK 500 LYS C 15 -66.89 -121.43 REMARK 500 SER C 27 59.25 -107.03 REMARK 500 LYS C 106 -30.40 -140.94 REMARK 500 SER F 101 162.22 176.71 REMARK 500 REMARK 500 REMARK: NULL DBREF 5VYO A 1 197 UNP Q63Y08 Q63Y08_BURPS 16 212 DBREF 5VYO B 1 197 UNP Q63Y08 Q63Y08_BURPS 16 212 DBREF 5VYO C 1 197 UNP Q63Y08 Q63Y08_BURPS 16 212 DBREF 5VYO D 1 197 UNP Q63Y08 Q63Y08_BURPS 16 212 DBREF 5VYO E 99 104 UNP Q63RY4 DSBB_BURPS 99 104 DBREF 5VYO F 99 104 UNP Q63RY4 DSBB_BURPS 99 104 DBREF 5VYO G 99 104 UNP Q63RY4 DSBB_BURPS 99 104 DBREF 5VYO H 99 104 UNP Q63RY4 DSBB_BURPS 99 104 SEQADV 5VYO SER A -2 UNP Q63Y08 EXPRESSION TAG SEQADV 5VYO ASN A -1 UNP Q63Y08 EXPRESSION TAG SEQADV 5VYO ALA A 0 UNP Q63Y08 EXPRESSION TAG SEQADV 5VYO ALA A 46 UNP Q63Y08 CYS 61 ENGINEERED MUTATION SEQADV 5VYO SER B -2 UNP Q63Y08 EXPRESSION TAG SEQADV 5VYO ASN B -1 UNP Q63Y08 EXPRESSION TAG SEQADV 5VYO ALA B 0 UNP Q63Y08 EXPRESSION TAG SEQADV 5VYO ALA B 46 UNP Q63Y08 CYS 61 ENGINEERED MUTATION SEQADV 5VYO SER C -2 UNP Q63Y08 EXPRESSION TAG SEQADV 5VYO ASN C -1 UNP Q63Y08 EXPRESSION TAG SEQADV 5VYO ALA C 0 UNP Q63Y08 EXPRESSION TAG SEQADV 5VYO ALA C 46 UNP Q63Y08 CYS 61 ENGINEERED MUTATION SEQADV 5VYO SER D -2 UNP Q63Y08 EXPRESSION TAG SEQADV 5VYO ASN D -1 UNP Q63Y08 EXPRESSION TAG SEQADV 5VYO ALA D 0 UNP Q63Y08 EXPRESSION TAG SEQADV 5VYO ALA D 46 UNP Q63Y08 CYS 61 ENGINEERED MUTATION SEQRES 1 A 200 SER ASN ALA ALA GLY PHE ALA GLN ALA SER PRO SER ALA SEQRES 2 A 200 PRO VAL ALA GLY LYS ASP PHE GLU VAL MET LYS SER PRO SEQRES 3 A 200 GLN PRO VAL SER ALA PRO ALA GLY LYS VAL GLU VAL ILE SEQRES 4 A 200 GLU PHE PHE TRP TYR GLY CYS PRO HIS ALA TYR GLU PHE SEQRES 5 A 200 GLU PRO THR ILE GLU ALA TRP VAL LYS LYS GLN GLY ASP SEQRES 6 A 200 LYS ILE ALA PHE LYS ARG VAL PRO VAL ALA PHE ARG ASP SEQRES 7 A 200 ASP PHE VAL PRO HIS SER LYS LEU PHE TYR ALA LEU ALA SEQRES 8 A 200 ALA LEU GLY VAL SER GLU LYS VAL THR PRO ALA VAL PHE SEQRES 9 A 200 ASN ALA ILE HIS LYS GLU LYS ASN TYR LEU LEU THR PRO SEQRES 10 A 200 GLN ALA GLN ALA ASP PHE LEU ALA THR GLN GLY VAL ASP SEQRES 11 A 200 LYS LYS LYS PHE LEU ASP ALA TYR ASN SER PHE SER VAL SEQRES 12 A 200 GLN GLY GLN VAL LYS GLN SER ALA GLU LEU LEU LYS ASN SEQRES 13 A 200 TYR ASN ILE ASP GLY VAL PRO THR ILE VAL VAL GLN GLY SEQRES 14 A 200 LYS TYR LYS THR GLY PRO ALA TYR THR ASN SER LEU GLU SEQRES 15 A 200 GLY THR ALA GLN VAL LEU ASP PHE LEU VAL LYS GLN VAL SEQRES 16 A 200 GLN ASP LYS LYS LEU SEQRES 1 B 200 SER ASN ALA ALA GLY PHE ALA GLN ALA SER PRO SER ALA SEQRES 2 B 200 PRO VAL ALA GLY LYS ASP PHE GLU VAL MET LYS SER PRO SEQRES 3 B 200 GLN PRO VAL SER ALA PRO ALA GLY LYS VAL GLU VAL ILE SEQRES 4 B 200 GLU PHE PHE TRP TYR GLY CYS PRO HIS ALA TYR GLU PHE SEQRES 5 B 200 GLU PRO THR ILE GLU ALA TRP VAL LYS LYS GLN GLY ASP SEQRES 6 B 200 LYS ILE ALA PHE LYS ARG VAL PRO VAL ALA PHE ARG ASP SEQRES 7 B 200 ASP PHE VAL PRO HIS SER LYS LEU PHE TYR ALA LEU ALA SEQRES 8 B 200 ALA LEU GLY VAL SER GLU LYS VAL THR PRO ALA VAL PHE SEQRES 9 B 200 ASN ALA ILE HIS LYS GLU LYS ASN TYR LEU LEU THR PRO SEQRES 10 B 200 GLN ALA GLN ALA ASP PHE LEU ALA THR GLN GLY VAL ASP SEQRES 11 B 200 LYS LYS LYS PHE LEU ASP ALA TYR ASN SER PHE SER VAL SEQRES 12 B 200 GLN GLY GLN VAL LYS GLN SER ALA GLU LEU LEU LYS ASN SEQRES 13 B 200 TYR ASN ILE ASP GLY VAL PRO THR ILE VAL VAL GLN GLY SEQRES 14 B 200 LYS TYR LYS THR GLY PRO ALA TYR THR ASN SER LEU GLU SEQRES 15 B 200 GLY THR ALA GLN VAL LEU ASP PHE LEU VAL LYS GLN VAL SEQRES 16 B 200 GLN ASP LYS LYS LEU SEQRES 1 C 200 SER ASN ALA ALA GLY PHE ALA GLN ALA SER PRO SER ALA SEQRES 2 C 200 PRO VAL ALA GLY LYS ASP PHE GLU VAL MET LYS SER PRO SEQRES 3 C 200 GLN PRO VAL SER ALA PRO ALA GLY LYS VAL GLU VAL ILE SEQRES 4 C 200 GLU PHE PHE TRP TYR GLY CYS PRO HIS ALA TYR GLU PHE SEQRES 5 C 200 GLU PRO THR ILE GLU ALA TRP VAL LYS LYS GLN GLY ASP SEQRES 6 C 200 LYS ILE ALA PHE LYS ARG VAL PRO VAL ALA PHE ARG ASP SEQRES 7 C 200 ASP PHE VAL PRO HIS SER LYS LEU PHE TYR ALA LEU ALA SEQRES 8 C 200 ALA LEU GLY VAL SER GLU LYS VAL THR PRO ALA VAL PHE SEQRES 9 C 200 ASN ALA ILE HIS LYS GLU LYS ASN TYR LEU LEU THR PRO SEQRES 10 C 200 GLN ALA GLN ALA ASP PHE LEU ALA THR GLN GLY VAL ASP SEQRES 11 C 200 LYS LYS LYS PHE LEU ASP ALA TYR ASN SER PHE SER VAL SEQRES 12 C 200 GLN GLY GLN VAL LYS GLN SER ALA GLU LEU LEU LYS ASN SEQRES 13 C 200 TYR ASN ILE ASP GLY VAL PRO THR ILE VAL VAL GLN GLY SEQRES 14 C 200 LYS TYR LYS THR GLY PRO ALA TYR THR ASN SER LEU GLU SEQRES 15 C 200 GLY THR ALA GLN VAL LEU ASP PHE LEU VAL LYS GLN VAL SEQRES 16 C 200 GLN ASP LYS LYS LEU SEQRES 1 D 200 SER ASN ALA ALA GLY PHE ALA GLN ALA SER PRO SER ALA SEQRES 2 D 200 PRO VAL ALA GLY LYS ASP PHE GLU VAL MET LYS SER PRO SEQRES 3 D 200 GLN PRO VAL SER ALA PRO ALA GLY LYS VAL GLU VAL ILE SEQRES 4 D 200 GLU PHE PHE TRP TYR GLY CYS PRO HIS ALA TYR GLU PHE SEQRES 5 D 200 GLU PRO THR ILE GLU ALA TRP VAL LYS LYS GLN GLY ASP SEQRES 6 D 200 LYS ILE ALA PHE LYS ARG VAL PRO VAL ALA PHE ARG ASP SEQRES 7 D 200 ASP PHE VAL PRO HIS SER LYS LEU PHE TYR ALA LEU ALA SEQRES 8 D 200 ALA LEU GLY VAL SER GLU LYS VAL THR PRO ALA VAL PHE SEQRES 9 D 200 ASN ALA ILE HIS LYS GLU LYS ASN TYR LEU LEU THR PRO SEQRES 10 D 200 GLN ALA GLN ALA ASP PHE LEU ALA THR GLN GLY VAL ASP SEQRES 11 D 200 LYS LYS LYS PHE LEU ASP ALA TYR ASN SER PHE SER VAL SEQRES 12 D 200 GLN GLY GLN VAL LYS GLN SER ALA GLU LEU LEU LYS ASN SEQRES 13 D 200 TYR ASN ILE ASP GLY VAL PRO THR ILE VAL VAL GLN GLY SEQRES 14 D 200 LYS TYR LYS THR GLY PRO ALA TYR THR ASN SER LEU GLU SEQRES 15 D 200 GLY THR ALA GLN VAL LEU ASP PHE LEU VAL LYS GLN VAL SEQRES 16 D 200 GLN ASP LYS LYS LEU SEQRES 1 E 6 GLY PHE SER CYS GLY PHE SEQRES 1 F 6 GLY PHE SER CYS GLY PHE SEQRES 1 G 6 GLY PHE SER CYS GLY PHE SEQRES 1 H 6 GLY PHE SER CYS GLY PHE FORMUL 9 HOH *284(H2 O) HELIX 1 AA1 CYS A 43 GLY A 61 1 19 HELIX 2 AA2 ARG A 74 ASP A 76 5 3 HELIX 3 AA3 PHE A 77 GLY A 91 1 15 HELIX 4 AA4 VAL A 92 LYS A 106 1 15 HELIX 5 AA5 THR A 113 GLN A 124 1 12 HELIX 6 AA6 ASP A 127 SER A 137 1 11 HELIX 7 AA7 SER A 137 TYR A 154 1 18 HELIX 8 AA8 GLY A 171 ASN A 176 1 6 HELIX 9 AA9 SER A 177 ASP A 194 1 18 HELIX 10 AB1 CYS B 43 GLY B 61 1 19 HELIX 11 AB2 ARG B 74 ASP B 76 5 3 HELIX 12 AB3 PHE B 77 GLY B 91 1 15 HELIX 13 AB4 VAL B 92 LYS B 106 1 15 HELIX 14 AB5 THR B 113 THR B 123 1 11 HELIX 15 AB6 ASP B 127 ASN B 136 1 10 HELIX 16 AB7 SER B 137 TYR B 154 1 18 HELIX 17 AB8 GLY B 171 ASN B 176 1 6 HELIX 18 AB9 SER B 177 ASP B 194 1 18 HELIX 19 AC1 CYS C 43 GLY C 61 1 19 HELIX 20 AC2 ARG C 74 ASP C 76 5 3 HELIX 21 AC3 PHE C 77 LEU C 90 1 14 HELIX 22 AC4 VAL C 92 LYS C 106 1 15 HELIX 23 AC5 THR C 113 GLN C 124 1 12 HELIX 24 AC6 ASP C 127 ASN C 136 1 10 HELIX 25 AC7 SER C 137 TYR C 154 1 18 HELIX 26 AC8 GLY C 171 ASN C 176 1 6 HELIX 27 AC9 SER C 177 ASP C 194 1 18 HELIX 28 AD1 CYS D 43 GLY D 61 1 19 HELIX 29 AD2 ARG D 74 ASP D 76 5 3 HELIX 30 AD3 PHE D 77 GLY D 91 1 15 HELIX 31 AD4 VAL D 92 LYS D 106 1 15 HELIX 32 AD5 THR D 113 THR D 123 1 11 HELIX 33 AD6 ASP D 127 ASN D 136 1 10 HELIX 34 AD7 SER D 137 TYR D 154 1 18 HELIX 35 AD8 GLY D 171 ASN D 176 1 6 HELIX 36 AD9 SER D 177 ASP D 194 1 18 SHEET 1 AA1 5 GLU A 18 VAL A 19 0 SHEET 2 AA1 5 TYR A 168 THR A 170 -1 O LYS A 169 N GLU A 18 SHEET 3 AA1 5 THR A 161 VAL A 164 -1 N VAL A 164 O TYR A 168 SHEET 4 AA1 5 VAL A 33 PHE A 39 -1 N PHE A 38 O THR A 161 SHEET 5 AA1 5 ILE A 64 PRO A 70 1 O VAL A 69 N GLU A 37 SHEET 1 AA2 5 GLU B 18 VAL B 19 0 SHEET 2 AA2 5 TYR B 168 THR B 170 -1 O LYS B 169 N GLU B 18 SHEET 3 AA2 5 THR B 161 VAL B 164 -1 N ILE B 162 O THR B 170 SHEET 4 AA2 5 VAL B 33 PHE B 39 -1 N PHE B 38 O THR B 161 SHEET 5 AA2 5 ILE B 64 PRO B 70 1 O ALA B 65 N VAL B 33 SHEET 1 AA3 5 GLU C 18 VAL C 19 0 SHEET 2 AA3 5 TYR C 168 THR C 170 -1 O LYS C 169 N GLU C 18 SHEET 3 AA3 5 THR C 161 VAL C 164 -1 N VAL C 164 O TYR C 168 SHEET 4 AA3 5 VAL C 33 PHE C 39 -1 N PHE C 38 O THR C 161 SHEET 5 AA3 5 ILE C 64 PRO C 70 1 O ALA C 65 N VAL C 33 SHEET 1 AA4 5 GLU D 18 VAL D 19 0 SHEET 2 AA4 5 TYR D 168 THR D 170 -1 O LYS D 169 N GLU D 18 SHEET 3 AA4 5 THR D 161 VAL D 164 -1 N VAL D 164 O TYR D 168 SHEET 4 AA4 5 VAL D 33 PHE D 39 -1 N PHE D 38 O THR D 161 SHEET 5 AA4 5 ILE D 64 PRO D 70 1 O ALA D 65 N VAL D 33 SSBOND 1 CYS A 43 CYS F 102 1555 1555 2.04 SSBOND 2 CYS B 43 CYS E 102 1555 1555 2.04 SSBOND 3 CYS C 43 CYS G 102 1555 1555 2.04 SSBOND 4 CYS D 43 CYS H 102 1555 1555 2.04 CISPEP 1 VAL A 159 PRO A 160 0 -6.00 CISPEP 2 VAL B 159 PRO B 160 0 -4.65 CISPEP 3 VAL C 159 PRO C 160 0 -3.55 CISPEP 4 VAL D 159 PRO D 160 0 -3.98 CRYST1 56.794 59.684 71.759 89.49 67.79 81.03 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017607 -0.002780 -0.007354 0.00000 SCALE2 0.000000 0.016962 0.000931 0.00000 SCALE3 0.000000 0.000000 0.015075 0.00000