data_5WYG # _entry.id 5WYG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5WYG pdb_00005wyg 10.2210/pdb5wyg/pdb WWPDB D_1300002488 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5WYG _pdbx_database_status.recvd_initial_deposition_date 2017-01-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Xie, W.' 1 ? 'Chen, R.' 2 ? 'Tu, J.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Biochem. Biophys. Res. Commun.' _citation.journal_id_ASTM BBRCA9 _citation.journal_id_CSD 0146 _citation.journal_id_ISSN 1090-2104 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 486 _citation.language ? _citation.page_first 804 _citation.page_last 810 _citation.title 'Structure of the MazF-mt9 toxin, a tRNA-specific endonuclease from Mycobacterium tuberculosis' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.bbrc.2017.03.132 _citation.pdbx_database_id_PubMed 28351618 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chen, R.' 1 ? primary 'Tu, J.' 2 ? primary 'Liu, Z.' 3 ? primary 'Meng, F.' 4 ? primary 'Ma, P.' 5 ? primary 'Ding, Z.' 6 ? primary 'Yang, C.' 7 ? primary 'Chen, L.' 8 ? primary 'Deng, X.' 9 ? primary 'Xie, W.' 10 ? # _cell.entry_id 5WYG _cell.length_a 74.468 _cell.length_b 74.468 _cell.length_c 105.114 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WYG _symmetry.space_group_name_H-M 'P 65' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Probable endoribonuclease MazF7' 14651.845 2 3.1.-.- ? ? ? 2 water nat water 18.015 56 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Toxin MazF7' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPELMAEPRRGDLWLVSLGAARAGEPGKHRPAVVVSVDELLTGIDDELVVVVPVSSSRSRTPLRPPVAPSEGVAADSVAV CRGVRAVARARLVERLGALKPATMRAIENALTLILGLPTGPERGEAATHSPVRWTGGRDP ; _entity_poly.pdbx_seq_one_letter_code_can ;GPELMAEPRRGDLWLVSLGAARAGEPGKHRPAVVVSVDELLTGIDDELVVVVPVSSSRSRTPLRPPVAPSEGVAADSVAV CRGVRAVARARLVERLGALKPATMRAIENALTLILGLPTGPERGEAATHSPVRWTGGRDP ; _entity_poly.pdbx_strand_id A,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLU n 1 4 LEU n 1 5 MET n 1 6 ALA n 1 7 GLU n 1 8 PRO n 1 9 ARG n 1 10 ARG n 1 11 GLY n 1 12 ASP n 1 13 LEU n 1 14 TRP n 1 15 LEU n 1 16 VAL n 1 17 SER n 1 18 LEU n 1 19 GLY n 1 20 ALA n 1 21 ALA n 1 22 ARG n 1 23 ALA n 1 24 GLY n 1 25 GLU n 1 26 PRO n 1 27 GLY n 1 28 LYS n 1 29 HIS n 1 30 ARG n 1 31 PRO n 1 32 ALA n 1 33 VAL n 1 34 VAL n 1 35 VAL n 1 36 SER n 1 37 VAL n 1 38 ASP n 1 39 GLU n 1 40 LEU n 1 41 LEU n 1 42 THR n 1 43 GLY n 1 44 ILE n 1 45 ASP n 1 46 ASP n 1 47 GLU n 1 48 LEU n 1 49 VAL n 1 50 VAL n 1 51 VAL n 1 52 VAL n 1 53 PRO n 1 54 VAL n 1 55 SER n 1 56 SER n 1 57 SER n 1 58 ARG n 1 59 SER n 1 60 ARG n 1 61 THR n 1 62 PRO n 1 63 LEU n 1 64 ARG n 1 65 PRO n 1 66 PRO n 1 67 VAL n 1 68 ALA n 1 69 PRO n 1 70 SER n 1 71 GLU n 1 72 GLY n 1 73 VAL n 1 74 ALA n 1 75 ALA n 1 76 ASP n 1 77 SER n 1 78 VAL n 1 79 ALA n 1 80 VAL n 1 81 CYS n 1 82 ARG n 1 83 GLY n 1 84 VAL n 1 85 ARG n 1 86 ALA n 1 87 VAL n 1 88 ALA n 1 89 ARG n 1 90 ALA n 1 91 ARG n 1 92 LEU n 1 93 VAL n 1 94 GLU n 1 95 ARG n 1 96 LEU n 1 97 GLY n 1 98 ALA n 1 99 LEU n 1 100 LYS n 1 101 PRO n 1 102 ALA n 1 103 THR n 1 104 MET n 1 105 ARG n 1 106 ALA n 1 107 ILE n 1 108 GLU n 1 109 ASN n 1 110 ALA n 1 111 LEU n 1 112 THR n 1 113 LEU n 1 114 ILE n 1 115 LEU n 1 116 GLY n 1 117 LEU n 1 118 PRO n 1 119 THR n 1 120 GLY n 1 121 PRO n 1 122 GLU n 1 123 ARG n 1 124 GLY n 1 125 GLU n 1 126 ALA n 1 127 ALA n 1 128 THR n 1 129 HIS n 1 130 SER n 1 131 PRO n 1 132 VAL n 1 133 ARG n 1 134 TRP n 1 135 THR n 1 136 GLY n 1 137 GLY n 1 138 ARG n 1 139 ASP n 1 140 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 140 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'mazF7, Rv2063A' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 25618 / H37Rv' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83332 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MAZF7_MYCTU _struct_ref.pdbx_db_accession P0CL62 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAEPRRGDLWLVSLGAARAGEPGKHRPAVVVSVDELLTGIDDELVVVVPVSSSRSRTPLRPPVAPSEGVAADSVAVCRGV RAVARARLVERLGALKPATMRAIENALTLILGLPTGPERGEAATHSPVRWTGGRDP ; _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5WYG A 5 ? 140 ? P0CL62 1 ? 136 ? 1 136 2 1 5WYG C 5 ? 140 ? P0CL62 1 ? 136 ? 1 136 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5WYG GLY A 1 ? UNP P0CL62 ? ? 'expression tag' -3 1 1 5WYG PRO A 2 ? UNP P0CL62 ? ? 'expression tag' -2 2 1 5WYG GLU A 3 ? UNP P0CL62 ? ? 'expression tag' -1 3 1 5WYG LEU A 4 ? UNP P0CL62 ? ? 'expression tag' 0 4 2 5WYG GLY C 1 ? UNP P0CL62 ? ? 'expression tag' -3 5 2 5WYG PRO C 2 ? UNP P0CL62 ? ? 'expression tag' -2 6 2 5WYG GLU C 3 ? UNP P0CL62 ? ? 'expression tag' -1 7 2 5WYG LEU C 4 ? UNP P0CL62 ? ? 'expression tag' 0 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5WYG _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.87 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 57.21 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1.5 M NaCl, 0.1 M NaOAc' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-12-24 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL17U _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5WYG _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.35 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 13737 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.5 _reflns.pdbx_Rmerge_I_obs 0.124 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 18.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.35 _reflns_shell.d_res_low 2.43 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 5.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1364 _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.793 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 5.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5WYG _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 13668 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 37.234 _refine.ls_d_res_high 2.356 _refine.ls_percent_reflns_obs 99.69 _refine.ls_R_factor_obs 0.1914 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1896 _refine.ls_R_factor_R_free 0.2240 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.95 _refine.ls_number_reflns_R_free 677 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model 5CKF _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.30 _refine.pdbx_overall_phase_error 26.64 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1552 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 56 _refine_hist.number_atoms_total 1608 _refine_hist.d_res_high 2.356 _refine_hist.d_res_low 37.234 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.006 ? ? 1572 'X-RAY DIFFRACTION' ? f_angle_d 1.002 ? ? 2144 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 17.520 ? ? 988 'X-RAY DIFFRACTION' ? f_chiral_restr 0.063 ? ? 273 'X-RAY DIFFRACTION' ? f_plane_restr 0.008 ? ? 275 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.3560 2.5379 2568 0.2332 99.00 0.2906 . . 148 . . . . 'X-RAY DIFFRACTION' . 2.5379 2.7932 2590 0.2144 100.00 0.2392 . . 140 . . . . 'X-RAY DIFFRACTION' . 2.7932 3.1972 2601 0.2088 100.00 0.2395 . . 126 . . . . 'X-RAY DIFFRACTION' . 3.1972 4.0274 2591 0.1858 100.00 0.2396 . . 142 . . . . 'X-RAY DIFFRACTION' . 4.0274 37.2386 2641 0.1689 100.00 0.1841 . . 121 . . . . # _struct.entry_id 5WYG _struct.title 'The crystal structure of the apo form of Mtb MazF' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5WYG _struct_keywords.text 'Mycobacterium tuberculosis, Toxin-antitoxin system, MazF, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 VAL A 37 ? LEU A 41 ? VAL A 33 LEU A 37 5 ? 5 HELX_P HELX_P2 AA2 ALA A 68 ? GLY A 72 ? ALA A 64 GLY A 68 5 ? 5 HELX_P HELX_P3 AA3 CYS A 81 ? VAL A 84 ? CYS A 77 VAL A 80 5 ? 4 HELX_P HELX_P4 AA4 LYS A 100 ? LEU A 115 ? LYS A 96 LEU A 111 1 ? 16 HELX_P HELX_P5 AA5 VAL B 37 ? LEU B 41 ? VAL C 33 LEU C 37 5 ? 5 HELX_P HELX_P6 AA6 ALA B 68 ? GLY B 72 ? ALA C 64 GLY C 68 5 ? 5 HELX_P HELX_P7 AA7 CYS B 81 ? VAL B 84 ? CYS C 77 VAL C 80 5 ? 4 HELX_P HELX_P8 AA8 LYS B 100 ? GLY B 116 ? LYS C 96 GLY C 112 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 6 ? AA3 ? 4 ? AA4 ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel AA4 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PRO A 66 ? VAL A 67 ? PRO A 62 VAL A 63 AA1 2 SER A 77 ? ALA A 79 ? SER A 73 ALA A 75 AA1 3 LEU A 48 ? SER A 55 ? LEU A 44 SER A 51 AA1 4 ARG A 85 ? ALA A 88 ? ARG A 81 ALA A 84 AA2 1 PRO A 66 ? VAL A 67 ? PRO A 62 VAL A 63 AA2 2 SER A 77 ? ALA A 79 ? SER A 73 ALA A 75 AA2 3 LEU A 48 ? SER A 55 ? LEU A 44 SER A 51 AA2 4 HIS A 29 ? VAL A 34 ? HIS A 25 VAL A 30 AA2 5 ASP A 12 ? SER A 17 ? ASP A 8 SER A 13 AA2 6 LEU A 92 ? ALA A 98 ? LEU A 88 ALA A 94 AA3 1 PRO B 66 ? VAL B 67 ? PRO C 62 VAL C 63 AA3 2 SER B 77 ? ALA B 79 ? SER C 73 ALA C 75 AA3 3 LEU B 48 ? SER B 55 ? LEU C 44 SER C 51 AA3 4 ARG B 85 ? ALA B 88 ? ARG C 81 ALA C 84 AA4 1 PRO B 66 ? VAL B 67 ? PRO C 62 VAL C 63 AA4 2 SER B 77 ? ALA B 79 ? SER C 73 ALA C 75 AA4 3 LEU B 48 ? SER B 55 ? LEU C 44 SER C 51 AA4 4 HIS B 29 ? VAL B 34 ? HIS C 25 VAL C 30 AA4 5 ASP B 12 ? SER B 17 ? ASP C 8 SER C 13 AA4 6 LEU B 92 ? ALA B 98 ? LEU C 88 ALA C 94 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 67 ? N VAL A 63 O SER A 77 ? O SER A 73 AA1 2 3 O VAL A 78 ? O VAL A 74 N SER A 55 ? N SER A 51 AA1 3 4 N VAL A 49 ? N VAL A 45 O VAL A 87 ? O VAL A 83 AA2 1 2 N VAL A 67 ? N VAL A 63 O SER A 77 ? O SER A 73 AA2 2 3 O VAL A 78 ? O VAL A 74 N SER A 55 ? N SER A 51 AA2 3 4 O VAL A 54 ? O VAL A 50 N PRO A 31 ? N PRO A 27 AA2 4 5 O ALA A 32 ? O ALA A 28 N TRP A 14 ? N TRP A 10 AA2 5 6 N LEU A 13 ? N LEU A 9 O LEU A 96 ? O LEU A 92 AA3 1 2 N VAL B 67 ? N VAL C 63 O SER B 77 ? O SER C 73 AA3 2 3 O VAL B 78 ? O VAL C 74 N SER B 55 ? N SER C 51 AA3 3 4 N VAL B 49 ? N VAL C 45 O VAL B 87 ? O VAL C 83 AA4 1 2 N VAL B 67 ? N VAL C 63 O SER B 77 ? O SER C 73 AA4 2 3 O VAL B 78 ? O VAL C 74 N SER B 55 ? N SER C 51 AA4 3 4 O VAL B 54 ? O VAL C 50 N PRO B 31 ? N PRO C 27 AA4 4 5 O ARG B 30 ? O ARG C 26 N VAL B 16 ? N VAL C 12 AA4 5 6 N LEU B 13 ? N LEU C 9 O LEU B 96 ? O LEU C 92 # _atom_sites.entry_id 5WYG _atom_sites.fract_transf_matrix[1][1] 0.013429 _atom_sites.fract_transf_matrix[1][2] 0.007753 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015506 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009513 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -3 ? ? ? A . n A 1 2 PRO 2 -2 ? ? ? A . n A 1 3 GLU 3 -1 ? ? ? A . n A 1 4 LEU 4 0 ? ? ? A . n A 1 5 MET 5 1 ? ? ? A . n A 1 6 ALA 6 2 2 ALA ALA A . n A 1 7 GLU 7 3 3 GLU GLU A . n A 1 8 PRO 8 4 4 PRO PRO A . n A 1 9 ARG 9 5 5 ARG ARG A . n A 1 10 ARG 10 6 6 ARG ARG A . n A 1 11 GLY 11 7 7 GLY GLY A . n A 1 12 ASP 12 8 8 ASP ASP A . n A 1 13 LEU 13 9 9 LEU LEU A . n A 1 14 TRP 14 10 10 TRP TRP A . n A 1 15 LEU 15 11 11 LEU LEU A . n A 1 16 VAL 16 12 12 VAL VAL A . n A 1 17 SER 17 13 13 SER SER A . n A 1 18 LEU 18 14 14 LEU LEU A . n A 1 19 GLY 19 15 ? ? ? A . n A 1 20 ALA 20 16 ? ? ? A . n A 1 21 ALA 21 17 ? ? ? A . n A 1 22 ARG 22 18 ? ? ? A . n A 1 23 ALA 23 19 ? ? ? A . n A 1 24 GLY 24 20 ? ? ? A . n A 1 25 GLU 25 21 ? ? ? A . n A 1 26 PRO 26 22 ? ? ? A . n A 1 27 GLY 27 23 23 GLY GLY A . n A 1 28 LYS 28 24 24 LYS LYS A . n A 1 29 HIS 29 25 25 HIS HIS A . n A 1 30 ARG 30 26 26 ARG ARG A . n A 1 31 PRO 31 27 27 PRO PRO A . n A 1 32 ALA 32 28 28 ALA ALA A . n A 1 33 VAL 33 29 29 VAL VAL A . n A 1 34 VAL 34 30 30 VAL VAL A . n A 1 35 VAL 35 31 31 VAL VAL A . n A 1 36 SER 36 32 32 SER SER A . n A 1 37 VAL 37 33 33 VAL VAL A . n A 1 38 ASP 38 34 34 ASP ASP A . n A 1 39 GLU 39 35 35 GLU GLU A . n A 1 40 LEU 40 36 36 LEU LEU A . n A 1 41 LEU 41 37 37 LEU LEU A . n A 1 42 THR 42 38 38 THR THR A . n A 1 43 GLY 43 39 39 GLY GLY A . n A 1 44 ILE 44 40 40 ILE ILE A . n A 1 45 ASP 45 41 41 ASP ASP A . n A 1 46 ASP 46 42 42 ASP ASP A . n A 1 47 GLU 47 43 43 GLU GLU A . n A 1 48 LEU 48 44 44 LEU LEU A . n A 1 49 VAL 49 45 45 VAL VAL A . n A 1 50 VAL 50 46 46 VAL VAL A . n A 1 51 VAL 51 47 47 VAL VAL A . n A 1 52 VAL 52 48 48 VAL VAL A . n A 1 53 PRO 53 49 49 PRO PRO A . n A 1 54 VAL 54 50 50 VAL VAL A . n A 1 55 SER 55 51 51 SER SER A . n A 1 56 SER 56 52 52 SER SER A . n A 1 57 SER 57 53 53 SER SER A . n A 1 58 ARG 58 54 54 ARG ARG A . n A 1 59 SER 59 55 55 SER SER A . n A 1 60 ARG 60 56 56 ARG ARG A . n A 1 61 THR 61 57 57 THR THR A . n A 1 62 PRO 62 58 58 PRO PRO A . n A 1 63 LEU 63 59 59 LEU LEU A . n A 1 64 ARG 64 60 60 ARG ARG A . n A 1 65 PRO 65 61 61 PRO PRO A . n A 1 66 PRO 66 62 62 PRO PRO A . n A 1 67 VAL 67 63 63 VAL VAL A . n A 1 68 ALA 68 64 64 ALA ALA A . n A 1 69 PRO 69 65 65 PRO PRO A . n A 1 70 SER 70 66 66 SER SER A . n A 1 71 GLU 71 67 67 GLU GLU A . n A 1 72 GLY 72 68 68 GLY GLY A . n A 1 73 VAL 73 69 69 VAL VAL A . n A 1 74 ALA 74 70 70 ALA ALA A . n A 1 75 ALA 75 71 71 ALA ALA A . n A 1 76 ASP 76 72 72 ASP ASP A . n A 1 77 SER 77 73 73 SER SER A . n A 1 78 VAL 78 74 74 VAL VAL A . n A 1 79 ALA 79 75 75 ALA ALA A . n A 1 80 VAL 80 76 76 VAL VAL A . n A 1 81 CYS 81 77 77 CYS CYS A . n A 1 82 ARG 82 78 78 ARG ARG A . n A 1 83 GLY 83 79 79 GLY GLY A . n A 1 84 VAL 84 80 80 VAL VAL A . n A 1 85 ARG 85 81 81 ARG ARG A . n A 1 86 ALA 86 82 82 ALA ALA A . n A 1 87 VAL 87 83 83 VAL VAL A . n A 1 88 ALA 88 84 84 ALA ALA A . n A 1 89 ARG 89 85 85 ARG ARG A . n A 1 90 ALA 90 86 86 ALA ALA A . n A 1 91 ARG 91 87 87 ARG ARG A . n A 1 92 LEU 92 88 88 LEU LEU A . n A 1 93 VAL 93 89 89 VAL VAL A . n A 1 94 GLU 94 90 90 GLU GLU A . n A 1 95 ARG 95 91 91 ARG ARG A . n A 1 96 LEU 96 92 92 LEU LEU A . n A 1 97 GLY 97 93 93 GLY GLY A . n A 1 98 ALA 98 94 94 ALA ALA A . n A 1 99 LEU 99 95 95 LEU LEU A . n A 1 100 LYS 100 96 96 LYS LYS A . n A 1 101 PRO 101 97 97 PRO PRO A . n A 1 102 ALA 102 98 98 ALA ALA A . n A 1 103 THR 103 99 99 THR THR A . n A 1 104 MET 104 100 100 MET MET A . n A 1 105 ARG 105 101 101 ARG ARG A . n A 1 106 ALA 106 102 102 ALA ALA A . n A 1 107 ILE 107 103 103 ILE ILE A . n A 1 108 GLU 108 104 104 GLU GLU A . n A 1 109 ASN 109 105 105 ASN ASN A . n A 1 110 ALA 110 106 106 ALA ALA A . n A 1 111 LEU 111 107 107 LEU LEU A . n A 1 112 THR 112 108 108 THR THR A . n A 1 113 LEU 113 109 109 LEU LEU A . n A 1 114 ILE 114 110 110 ILE ILE A . n A 1 115 LEU 115 111 111 LEU LEU A . n A 1 116 GLY 116 112 112 GLY GLY A . n A 1 117 LEU 117 113 113 LEU LEU A . n A 1 118 PRO 118 114 114 PRO PRO A . n A 1 119 THR 119 115 ? ? ? A . n A 1 120 GLY 120 116 ? ? ? A . n A 1 121 PRO 121 117 ? ? ? A . n A 1 122 GLU 122 118 ? ? ? A . n A 1 123 ARG 123 119 ? ? ? A . n A 1 124 GLY 124 120 ? ? ? A . n A 1 125 GLU 125 121 ? ? ? A . n A 1 126 ALA 126 122 ? ? ? A . n A 1 127 ALA 127 123 ? ? ? A . n A 1 128 THR 128 124 ? ? ? A . n A 1 129 HIS 129 125 ? ? ? A . n A 1 130 SER 130 126 ? ? ? A . n A 1 131 PRO 131 127 ? ? ? A . n A 1 132 VAL 132 128 ? ? ? A . n A 1 133 ARG 133 129 ? ? ? A . n A 1 134 TRP 134 130 ? ? ? A . n A 1 135 THR 135 131 ? ? ? A . n A 1 136 GLY 136 132 ? ? ? A . n A 1 137 GLY 137 133 ? ? ? A . n A 1 138 ARG 138 134 ? ? ? A . n A 1 139 ASP 139 135 ? ? ? A . n A 1 140 PRO 140 136 ? ? ? A . n B 1 1 GLY 1 -3 ? ? ? C . n B 1 2 PRO 2 -2 ? ? ? C . n B 1 3 GLU 3 -1 ? ? ? C . n B 1 4 LEU 4 0 ? ? ? C . n B 1 5 MET 5 1 1 MET MET C . n B 1 6 ALA 6 2 2 ALA ALA C . n B 1 7 GLU 7 3 3 GLU GLU C . n B 1 8 PRO 8 4 4 PRO PRO C . n B 1 9 ARG 9 5 5 ARG ARG C . n B 1 10 ARG 10 6 6 ARG ARG C . n B 1 11 GLY 11 7 7 GLY GLY C . n B 1 12 ASP 12 8 8 ASP ASP C . n B 1 13 LEU 13 9 9 LEU LEU C . n B 1 14 TRP 14 10 10 TRP TRP C . n B 1 15 LEU 15 11 11 LEU LEU C . n B 1 16 VAL 16 12 12 VAL VAL C . n B 1 17 SER 17 13 13 SER SER C . n B 1 18 LEU 18 14 14 LEU LEU C . n B 1 19 GLY 19 15 ? ? ? C . n B 1 20 ALA 20 16 ? ? ? C . n B 1 21 ALA 21 17 ? ? ? C . n B 1 22 ARG 22 18 ? ? ? C . n B 1 23 ALA 23 19 ? ? ? C . n B 1 24 GLY 24 20 ? ? ? C . n B 1 25 GLU 25 21 ? ? ? C . n B 1 26 PRO 26 22 ? ? ? C . n B 1 27 GLY 27 23 23 GLY GLY C . n B 1 28 LYS 28 24 24 LYS LYS C . n B 1 29 HIS 29 25 25 HIS HIS C . n B 1 30 ARG 30 26 26 ARG ARG C . n B 1 31 PRO 31 27 27 PRO PRO C . n B 1 32 ALA 32 28 28 ALA ALA C . n B 1 33 VAL 33 29 29 VAL VAL C . n B 1 34 VAL 34 30 30 VAL VAL C . n B 1 35 VAL 35 31 31 VAL VAL C . n B 1 36 SER 36 32 32 SER SER C . n B 1 37 VAL 37 33 33 VAL VAL C . n B 1 38 ASP 38 34 34 ASP ASP C . n B 1 39 GLU 39 35 35 GLU GLU C . n B 1 40 LEU 40 36 36 LEU LEU C . n B 1 41 LEU 41 37 37 LEU LEU C . n B 1 42 THR 42 38 38 THR THR C . n B 1 43 GLY 43 39 39 GLY GLY C . n B 1 44 ILE 44 40 40 ILE ILE C . n B 1 45 ASP 45 41 41 ASP ASP C . n B 1 46 ASP 46 42 42 ASP ASP C . n B 1 47 GLU 47 43 43 GLU GLU C . n B 1 48 LEU 48 44 44 LEU LEU C . n B 1 49 VAL 49 45 45 VAL VAL C . n B 1 50 VAL 50 46 46 VAL VAL C . n B 1 51 VAL 51 47 47 VAL VAL C . n B 1 52 VAL 52 48 48 VAL VAL C . n B 1 53 PRO 53 49 49 PRO PRO C . n B 1 54 VAL 54 50 50 VAL VAL C . n B 1 55 SER 55 51 51 SER SER C . n B 1 56 SER 56 52 52 SER SER C . n B 1 57 SER 57 53 53 SER SER C . n B 1 58 ARG 58 54 54 ARG ARG C . n B 1 59 SER 59 55 55 SER SER C . n B 1 60 ARG 60 56 56 ARG ARG C . n B 1 61 THR 61 57 57 THR THR C . n B 1 62 PRO 62 58 58 PRO PRO C . n B 1 63 LEU 63 59 59 LEU LEU C . n B 1 64 ARG 64 60 60 ARG ARG C . n B 1 65 PRO 65 61 61 PRO PRO C . n B 1 66 PRO 66 62 62 PRO PRO C . n B 1 67 VAL 67 63 63 VAL VAL C . n B 1 68 ALA 68 64 64 ALA ALA C . n B 1 69 PRO 69 65 65 PRO PRO C . n B 1 70 SER 70 66 66 SER SER C . n B 1 71 GLU 71 67 67 GLU GLU C . n B 1 72 GLY 72 68 68 GLY GLY C . n B 1 73 VAL 73 69 69 VAL VAL C . n B 1 74 ALA 74 70 70 ALA ALA C . n B 1 75 ALA 75 71 71 ALA ALA C . n B 1 76 ASP 76 72 72 ASP ASP C . n B 1 77 SER 77 73 73 SER SER C . n B 1 78 VAL 78 74 74 VAL VAL C . n B 1 79 ALA 79 75 75 ALA ALA C . n B 1 80 VAL 80 76 76 VAL VAL C . n B 1 81 CYS 81 77 77 CYS CYS C . n B 1 82 ARG 82 78 78 ARG ARG C . n B 1 83 GLY 83 79 79 GLY GLY C . n B 1 84 VAL 84 80 80 VAL VAL C . n B 1 85 ARG 85 81 81 ARG ARG C . n B 1 86 ALA 86 82 82 ALA ALA C . n B 1 87 VAL 87 83 83 VAL VAL C . n B 1 88 ALA 88 84 84 ALA ALA C . n B 1 89 ARG 89 85 85 ARG ARG C . n B 1 90 ALA 90 86 86 ALA ALA C . n B 1 91 ARG 91 87 87 ARG ARG C . n B 1 92 LEU 92 88 88 LEU LEU C . n B 1 93 VAL 93 89 89 VAL VAL C . n B 1 94 GLU 94 90 90 GLU GLU C . n B 1 95 ARG 95 91 91 ARG ARG C . n B 1 96 LEU 96 92 92 LEU LEU C . n B 1 97 GLY 97 93 93 GLY GLY C . n B 1 98 ALA 98 94 94 ALA ALA C . n B 1 99 LEU 99 95 95 LEU LEU C . n B 1 100 LYS 100 96 96 LYS LYS C . n B 1 101 PRO 101 97 97 PRO PRO C . n B 1 102 ALA 102 98 98 ALA ALA C . n B 1 103 THR 103 99 99 THR THR C . n B 1 104 MET 104 100 100 MET MET C . n B 1 105 ARG 105 101 101 ARG ARG C . n B 1 106 ALA 106 102 102 ALA ALA C . n B 1 107 ILE 107 103 103 ILE ILE C . n B 1 108 GLU 108 104 104 GLU GLU C . n B 1 109 ASN 109 105 105 ASN ASN C . n B 1 110 ALA 110 106 106 ALA ALA C . n B 1 111 LEU 111 107 107 LEU LEU C . n B 1 112 THR 112 108 108 THR THR C . n B 1 113 LEU 113 109 109 LEU LEU C . n B 1 114 ILE 114 110 110 ILE ILE C . n B 1 115 LEU 115 111 111 LEU LEU C . n B 1 116 GLY 116 112 112 GLY GLY C . n B 1 117 LEU 117 113 113 LEU LEU C . n B 1 118 PRO 118 114 114 PRO PRO C . n B 1 119 THR 119 115 ? ? ? C . n B 1 120 GLY 120 116 ? ? ? C . n B 1 121 PRO 121 117 ? ? ? C . n B 1 122 GLU 122 118 ? ? ? C . n B 1 123 ARG 123 119 ? ? ? C . n B 1 124 GLY 124 120 ? ? ? C . n B 1 125 GLU 125 121 ? ? ? C . n B 1 126 ALA 126 122 ? ? ? C . n B 1 127 ALA 127 123 ? ? ? C . n B 1 128 THR 128 124 ? ? ? C . n B 1 129 HIS 129 125 ? ? ? C . n B 1 130 SER 130 126 ? ? ? C . n B 1 131 PRO 131 127 ? ? ? C . n B 1 132 VAL 132 128 ? ? ? C . n B 1 133 ARG 133 129 ? ? ? C . n B 1 134 TRP 134 130 ? ? ? C . n B 1 135 THR 135 131 ? ? ? C . n B 1 136 GLY 136 132 ? ? ? C . n B 1 137 GLY 137 133 ? ? ? C . n B 1 138 ARG 138 134 ? ? ? C . n B 1 139 ASP 139 135 ? ? ? C . n B 1 140 PRO 140 136 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 201 30 HOH HOH A . C 2 HOH 2 202 59 HOH HOH A . C 2 HOH 3 203 40 HOH HOH A . C 2 HOH 4 204 7 HOH HOH A . C 2 HOH 5 205 44 HOH HOH A . C 2 HOH 6 206 5 HOH HOH A . C 2 HOH 7 207 38 HOH HOH A . C 2 HOH 8 208 36 HOH HOH A . C 2 HOH 9 209 21 HOH HOH A . C 2 HOH 10 210 35 HOH HOH A . C 2 HOH 11 211 13 HOH HOH A . C 2 HOH 12 212 39 HOH HOH A . C 2 HOH 13 213 19 HOH HOH A . C 2 HOH 14 214 46 HOH HOH A . C 2 HOH 15 215 22 HOH HOH A . C 2 HOH 16 216 53 HOH HOH A . C 2 HOH 17 217 48 HOH HOH A . C 2 HOH 18 218 16 HOH HOH A . C 2 HOH 19 219 17 HOH HOH A . C 2 HOH 20 220 26 HOH HOH A . C 2 HOH 21 221 58 HOH HOH A . C 2 HOH 22 222 11 HOH HOH A . C 2 HOH 23 223 3 HOH HOH A . C 2 HOH 24 224 1 HOH HOH A . C 2 HOH 25 225 56 HOH HOH A . C 2 HOH 26 226 50 HOH HOH A . C 2 HOH 27 227 23 HOH HOH A . C 2 HOH 28 228 9 HOH HOH A . C 2 HOH 29 229 52 HOH HOH A . C 2 HOH 30 230 57 HOH HOH A . C 2 HOH 31 231 8 HOH HOH A . D 2 HOH 1 201 14 HOH HOH C . D 2 HOH 2 202 49 HOH HOH C . D 2 HOH 3 203 37 HOH HOH C . D 2 HOH 4 204 10 HOH HOH C . D 2 HOH 5 205 51 HOH HOH C . D 2 HOH 6 206 6 HOH HOH C . D 2 HOH 7 207 29 HOH HOH C . D 2 HOH 8 208 15 HOH HOH C . D 2 HOH 9 209 31 HOH HOH C . D 2 HOH 10 210 12 HOH HOH C . D 2 HOH 11 211 34 HOH HOH C . D 2 HOH 12 212 27 HOH HOH C . D 2 HOH 13 213 25 HOH HOH C . D 2 HOH 14 214 42 HOH HOH C . D 2 HOH 15 215 47 HOH HOH C . D 2 HOH 16 216 18 HOH HOH C . D 2 HOH 17 217 32 HOH HOH C . D 2 HOH 18 218 55 HOH HOH C . D 2 HOH 19 219 4 HOH HOH C . D 2 HOH 20 220 20 HOH HOH C . D 2 HOH 21 221 54 HOH HOH C . D 2 HOH 22 222 2 HOH HOH C . D 2 HOH 23 223 28 HOH HOH C . D 2 HOH 24 224 24 HOH HOH C . D 2 HOH 25 225 41 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2000 ? 1 MORE -13 ? 1 'SSA (A^2)' 10110 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-04-12 2 'Structure model' 1 1 2017-04-19 3 'Structure model' 1 2 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.10.1_2155)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CD _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 PRO _pdbx_validate_rmsd_bond.auth_seq_id_1 27 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 N _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 PRO _pdbx_validate_rmsd_bond.auth_seq_id_2 27 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.385 _pdbx_validate_rmsd_bond.bond_target_value 1.474 _pdbx_validate_rmsd_bond.bond_deviation -0.089 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.014 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 C ASP 42 ? CG ? B ASP 46 CG 2 1 Y 1 C ASP 42 ? OD1 ? B ASP 46 OD1 3 1 Y 1 C ASP 42 ? OD2 ? B ASP 46 OD2 4 1 Y 1 C ASP 72 ? CG ? B ASP 76 CG 5 1 Y 1 C ASP 72 ? OD1 ? B ASP 76 OD1 6 1 Y 1 C ASP 72 ? OD2 ? B ASP 76 OD2 7 1 Y 1 C LYS 96 ? CG ? B LYS 100 CG 8 1 Y 1 C LYS 96 ? CD ? B LYS 100 CD 9 1 Y 1 C LYS 96 ? CE ? B LYS 100 CE 10 1 Y 1 C LYS 96 ? NZ ? B LYS 100 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -3 ? A GLY 1 2 1 Y 1 A PRO -2 ? A PRO 2 3 1 Y 1 A GLU -1 ? A GLU 3 4 1 Y 1 A LEU 0 ? A LEU 4 5 1 Y 1 A MET 1 ? A MET 5 6 1 Y 1 A GLY 15 ? A GLY 19 7 1 Y 1 A ALA 16 ? A ALA 20 8 1 Y 1 A ALA 17 ? A ALA 21 9 1 Y 1 A ARG 18 ? A ARG 22 10 1 Y 1 A ALA 19 ? A ALA 23 11 1 Y 1 A GLY 20 ? A GLY 24 12 1 Y 1 A GLU 21 ? A GLU 25 13 1 Y 1 A PRO 22 ? A PRO 26 14 1 Y 1 A THR 115 ? A THR 119 15 1 Y 1 A GLY 116 ? A GLY 120 16 1 Y 1 A PRO 117 ? A PRO 121 17 1 Y 1 A GLU 118 ? A GLU 122 18 1 Y 1 A ARG 119 ? A ARG 123 19 1 Y 1 A GLY 120 ? A GLY 124 20 1 Y 1 A GLU 121 ? A GLU 125 21 1 Y 1 A ALA 122 ? A ALA 126 22 1 Y 1 A ALA 123 ? A ALA 127 23 1 Y 1 A THR 124 ? A THR 128 24 1 Y 1 A HIS 125 ? A HIS 129 25 1 Y 1 A SER 126 ? A SER 130 26 1 Y 1 A PRO 127 ? A PRO 131 27 1 Y 1 A VAL 128 ? A VAL 132 28 1 Y 1 A ARG 129 ? A ARG 133 29 1 Y 1 A TRP 130 ? A TRP 134 30 1 Y 1 A THR 131 ? A THR 135 31 1 Y 1 A GLY 132 ? A GLY 136 32 1 Y 1 A GLY 133 ? A GLY 137 33 1 Y 1 A ARG 134 ? A ARG 138 34 1 Y 1 A ASP 135 ? A ASP 139 35 1 Y 1 A PRO 136 ? A PRO 140 36 1 Y 1 C GLY -3 ? B GLY 1 37 1 Y 1 C PRO -2 ? B PRO 2 38 1 Y 1 C GLU -1 ? B GLU 3 39 1 Y 1 C LEU 0 ? B LEU 4 40 1 Y 1 C GLY 15 ? B GLY 19 41 1 Y 1 C ALA 16 ? B ALA 20 42 1 Y 1 C ALA 17 ? B ALA 21 43 1 Y 1 C ARG 18 ? B ARG 22 44 1 Y 1 C ALA 19 ? B ALA 23 45 1 Y 1 C GLY 20 ? B GLY 24 46 1 Y 1 C GLU 21 ? B GLU 25 47 1 Y 1 C PRO 22 ? B PRO 26 48 1 Y 1 C THR 115 ? B THR 119 49 1 Y 1 C GLY 116 ? B GLY 120 50 1 Y 1 C PRO 117 ? B PRO 121 51 1 Y 1 C GLU 118 ? B GLU 122 52 1 Y 1 C ARG 119 ? B ARG 123 53 1 Y 1 C GLY 120 ? B GLY 124 54 1 Y 1 C GLU 121 ? B GLU 125 55 1 Y 1 C ALA 122 ? B ALA 126 56 1 Y 1 C ALA 123 ? B ALA 127 57 1 Y 1 C THR 124 ? B THR 128 58 1 Y 1 C HIS 125 ? B HIS 129 59 1 Y 1 C SER 126 ? B SER 130 60 1 Y 1 C PRO 127 ? B PRO 131 61 1 Y 1 C VAL 128 ? B VAL 132 62 1 Y 1 C ARG 129 ? B ARG 133 63 1 Y 1 C TRP 130 ? B TRP 134 64 1 Y 1 C THR 131 ? B THR 135 65 1 Y 1 C GLY 132 ? B GLY 136 66 1 Y 1 C GLY 133 ? B GLY 137 67 1 Y 1 C ARG 134 ? B ARG 138 68 1 Y 1 C ASP 135 ? B ASP 139 69 1 Y 1 C PRO 136 ? B PRO 140 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLU N N N N 88 GLU CA C N S 89 GLU C C N N 90 GLU O O N N 91 GLU CB C N N 92 GLU CG C N N 93 GLU CD C N N 94 GLU OE1 O N N 95 GLU OE2 O N N 96 GLU OXT O N N 97 GLU H H N N 98 GLU H2 H N N 99 GLU HA H N N 100 GLU HB2 H N N 101 GLU HB3 H N N 102 GLU HG2 H N N 103 GLU HG3 H N N 104 GLU HE2 H N N 105 GLU HXT H N N 106 GLY N N N N 107 GLY CA C N N 108 GLY C C N N 109 GLY O O N N 110 GLY OXT O N N 111 GLY H H N N 112 GLY H2 H N N 113 GLY HA2 H N N 114 GLY HA3 H N N 115 GLY HXT H N N 116 HIS N N N N 117 HIS CA C N S 118 HIS C C N N 119 HIS O O N N 120 HIS CB C N N 121 HIS CG C Y N 122 HIS ND1 N Y N 123 HIS CD2 C Y N 124 HIS CE1 C Y N 125 HIS NE2 N Y N 126 HIS OXT O N N 127 HIS H H N N 128 HIS H2 H N N 129 HIS HA H N N 130 HIS HB2 H N N 131 HIS HB3 H N N 132 HIS HD1 H N N 133 HIS HD2 H N N 134 HIS HE1 H N N 135 HIS HE2 H N N 136 HIS HXT H N N 137 HOH O O N N 138 HOH H1 H N N 139 HOH H2 H N N 140 ILE N N N N 141 ILE CA C N S 142 ILE C C N N 143 ILE O O N N 144 ILE CB C N S 145 ILE CG1 C N N 146 ILE CG2 C N N 147 ILE CD1 C N N 148 ILE OXT O N N 149 ILE H H N N 150 ILE H2 H N N 151 ILE HA H N N 152 ILE HB H N N 153 ILE HG12 H N N 154 ILE HG13 H N N 155 ILE HG21 H N N 156 ILE HG22 H N N 157 ILE HG23 H N N 158 ILE HD11 H N N 159 ILE HD12 H N N 160 ILE HD13 H N N 161 ILE HXT H N N 162 LEU N N N N 163 LEU CA C N S 164 LEU C C N N 165 LEU O O N N 166 LEU CB C N N 167 LEU CG C N N 168 LEU CD1 C N N 169 LEU CD2 C N N 170 LEU OXT O N N 171 LEU H H N N 172 LEU H2 H N N 173 LEU HA H N N 174 LEU HB2 H N N 175 LEU HB3 H N N 176 LEU HG H N N 177 LEU HD11 H N N 178 LEU HD12 H N N 179 LEU HD13 H N N 180 LEU HD21 H N N 181 LEU HD22 H N N 182 LEU HD23 H N N 183 LEU HXT H N N 184 LYS N N N N 185 LYS CA C N S 186 LYS C C N N 187 LYS O O N N 188 LYS CB C N N 189 LYS CG C N N 190 LYS CD C N N 191 LYS CE C N N 192 LYS NZ N N N 193 LYS OXT O N N 194 LYS H H N N 195 LYS H2 H N N 196 LYS HA H N N 197 LYS HB2 H N N 198 LYS HB3 H N N 199 LYS HG2 H N N 200 LYS HG3 H N N 201 LYS HD2 H N N 202 LYS HD3 H N N 203 LYS HE2 H N N 204 LYS HE3 H N N 205 LYS HZ1 H N N 206 LYS HZ2 H N N 207 LYS HZ3 H N N 208 LYS HXT H N N 209 MET N N N N 210 MET CA C N S 211 MET C C N N 212 MET O O N N 213 MET CB C N N 214 MET CG C N N 215 MET SD S N N 216 MET CE C N N 217 MET OXT O N N 218 MET H H N N 219 MET H2 H N N 220 MET HA H N N 221 MET HB2 H N N 222 MET HB3 H N N 223 MET HG2 H N N 224 MET HG3 H N N 225 MET HE1 H N N 226 MET HE2 H N N 227 MET HE3 H N N 228 MET HXT H N N 229 PRO N N N N 230 PRO CA C N S 231 PRO C C N N 232 PRO O O N N 233 PRO CB C N N 234 PRO CG C N N 235 PRO CD C N N 236 PRO OXT O N N 237 PRO H H N N 238 PRO HA H N N 239 PRO HB2 H N N 240 PRO HB3 H N N 241 PRO HG2 H N N 242 PRO HG3 H N N 243 PRO HD2 H N N 244 PRO HD3 H N N 245 PRO HXT H N N 246 SER N N N N 247 SER CA C N S 248 SER C C N N 249 SER O O N N 250 SER CB C N N 251 SER OG O N N 252 SER OXT O N N 253 SER H H N N 254 SER H2 H N N 255 SER HA H N N 256 SER HB2 H N N 257 SER HB3 H N N 258 SER HG H N N 259 SER HXT H N N 260 THR N N N N 261 THR CA C N S 262 THR C C N N 263 THR O O N N 264 THR CB C N R 265 THR OG1 O N N 266 THR CG2 C N N 267 THR OXT O N N 268 THR H H N N 269 THR H2 H N N 270 THR HA H N N 271 THR HB H N N 272 THR HG1 H N N 273 THR HG21 H N N 274 THR HG22 H N N 275 THR HG23 H N N 276 THR HXT H N N 277 TRP N N N N 278 TRP CA C N S 279 TRP C C N N 280 TRP O O N N 281 TRP CB C N N 282 TRP CG C Y N 283 TRP CD1 C Y N 284 TRP CD2 C Y N 285 TRP NE1 N Y N 286 TRP CE2 C Y N 287 TRP CE3 C Y N 288 TRP CZ2 C Y N 289 TRP CZ3 C Y N 290 TRP CH2 C Y N 291 TRP OXT O N N 292 TRP H H N N 293 TRP H2 H N N 294 TRP HA H N N 295 TRP HB2 H N N 296 TRP HB3 H N N 297 TRP HD1 H N N 298 TRP HE1 H N N 299 TRP HE3 H N N 300 TRP HZ2 H N N 301 TRP HZ3 H N N 302 TRP HH2 H N N 303 TRP HXT H N N 304 VAL N N N N 305 VAL CA C N S 306 VAL C C N N 307 VAL O O N N 308 VAL CB C N N 309 VAL CG1 C N N 310 VAL CG2 C N N 311 VAL OXT O N N 312 VAL H H N N 313 VAL H2 H N N 314 VAL HA H N N 315 VAL HB H N N 316 VAL HG11 H N N 317 VAL HG12 H N N 318 VAL HG13 H N N 319 VAL HG21 H N N 320 VAL HG22 H N N 321 VAL HG23 H N N 322 VAL HXT H N N 323 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLU N CA sing N N 83 GLU N H sing N N 84 GLU N H2 sing N N 85 GLU CA C sing N N 86 GLU CA CB sing N N 87 GLU CA HA sing N N 88 GLU C O doub N N 89 GLU C OXT sing N N 90 GLU CB CG sing N N 91 GLU CB HB2 sing N N 92 GLU CB HB3 sing N N 93 GLU CG CD sing N N 94 GLU CG HG2 sing N N 95 GLU CG HG3 sing N N 96 GLU CD OE1 doub N N 97 GLU CD OE2 sing N N 98 GLU OE2 HE2 sing N N 99 GLU OXT HXT sing N N 100 GLY N CA sing N N 101 GLY N H sing N N 102 GLY N H2 sing N N 103 GLY CA C sing N N 104 GLY CA HA2 sing N N 105 GLY CA HA3 sing N N 106 GLY C O doub N N 107 GLY C OXT sing N N 108 GLY OXT HXT sing N N 109 HIS N CA sing N N 110 HIS N H sing N N 111 HIS N H2 sing N N 112 HIS CA C sing N N 113 HIS CA CB sing N N 114 HIS CA HA sing N N 115 HIS C O doub N N 116 HIS C OXT sing N N 117 HIS CB CG sing N N 118 HIS CB HB2 sing N N 119 HIS CB HB3 sing N N 120 HIS CG ND1 sing Y N 121 HIS CG CD2 doub Y N 122 HIS ND1 CE1 doub Y N 123 HIS ND1 HD1 sing N N 124 HIS CD2 NE2 sing Y N 125 HIS CD2 HD2 sing N N 126 HIS CE1 NE2 sing Y N 127 HIS CE1 HE1 sing N N 128 HIS NE2 HE2 sing N N 129 HIS OXT HXT sing N N 130 HOH O H1 sing N N 131 HOH O H2 sing N N 132 ILE N CA sing N N 133 ILE N H sing N N 134 ILE N H2 sing N N 135 ILE CA C sing N N 136 ILE CA CB sing N N 137 ILE CA HA sing N N 138 ILE C O doub N N 139 ILE C OXT sing N N 140 ILE CB CG1 sing N N 141 ILE CB CG2 sing N N 142 ILE CB HB sing N N 143 ILE CG1 CD1 sing N N 144 ILE CG1 HG12 sing N N 145 ILE CG1 HG13 sing N N 146 ILE CG2 HG21 sing N N 147 ILE CG2 HG22 sing N N 148 ILE CG2 HG23 sing N N 149 ILE CD1 HD11 sing N N 150 ILE CD1 HD12 sing N N 151 ILE CD1 HD13 sing N N 152 ILE OXT HXT sing N N 153 LEU N CA sing N N 154 LEU N H sing N N 155 LEU N H2 sing N N 156 LEU CA C sing N N 157 LEU CA CB sing N N 158 LEU CA HA sing N N 159 LEU C O doub N N 160 LEU C OXT sing N N 161 LEU CB CG sing N N 162 LEU CB HB2 sing N N 163 LEU CB HB3 sing N N 164 LEU CG CD1 sing N N 165 LEU CG CD2 sing N N 166 LEU CG HG sing N N 167 LEU CD1 HD11 sing N N 168 LEU CD1 HD12 sing N N 169 LEU CD1 HD13 sing N N 170 LEU CD2 HD21 sing N N 171 LEU CD2 HD22 sing N N 172 LEU CD2 HD23 sing N N 173 LEU OXT HXT sing N N 174 LYS N CA sing N N 175 LYS N H sing N N 176 LYS N H2 sing N N 177 LYS CA C sing N N 178 LYS CA CB sing N N 179 LYS CA HA sing N N 180 LYS C O doub N N 181 LYS C OXT sing N N 182 LYS CB CG sing N N 183 LYS CB HB2 sing N N 184 LYS CB HB3 sing N N 185 LYS CG CD sing N N 186 LYS CG HG2 sing N N 187 LYS CG HG3 sing N N 188 LYS CD CE sing N N 189 LYS CD HD2 sing N N 190 LYS CD HD3 sing N N 191 LYS CE NZ sing N N 192 LYS CE HE2 sing N N 193 LYS CE HE3 sing N N 194 LYS NZ HZ1 sing N N 195 LYS NZ HZ2 sing N N 196 LYS NZ HZ3 sing N N 197 LYS OXT HXT sing N N 198 MET N CA sing N N 199 MET N H sing N N 200 MET N H2 sing N N 201 MET CA C sing N N 202 MET CA CB sing N N 203 MET CA HA sing N N 204 MET C O doub N N 205 MET C OXT sing N N 206 MET CB CG sing N N 207 MET CB HB2 sing N N 208 MET CB HB3 sing N N 209 MET CG SD sing N N 210 MET CG HG2 sing N N 211 MET CG HG3 sing N N 212 MET SD CE sing N N 213 MET CE HE1 sing N N 214 MET CE HE2 sing N N 215 MET CE HE3 sing N N 216 MET OXT HXT sing N N 217 PRO N CA sing N N 218 PRO N CD sing N N 219 PRO N H sing N N 220 PRO CA C sing N N 221 PRO CA CB sing N N 222 PRO CA HA sing N N 223 PRO C O doub N N 224 PRO C OXT sing N N 225 PRO CB CG sing N N 226 PRO CB HB2 sing N N 227 PRO CB HB3 sing N N 228 PRO CG CD sing N N 229 PRO CG HG2 sing N N 230 PRO CG HG3 sing N N 231 PRO CD HD2 sing N N 232 PRO CD HD3 sing N N 233 PRO OXT HXT sing N N 234 SER N CA sing N N 235 SER N H sing N N 236 SER N H2 sing N N 237 SER CA C sing N N 238 SER CA CB sing N N 239 SER CA HA sing N N 240 SER C O doub N N 241 SER C OXT sing N N 242 SER CB OG sing N N 243 SER CB HB2 sing N N 244 SER CB HB3 sing N N 245 SER OG HG sing N N 246 SER OXT HXT sing N N 247 THR N CA sing N N 248 THR N H sing N N 249 THR N H2 sing N N 250 THR CA C sing N N 251 THR CA CB sing N N 252 THR CA HA sing N N 253 THR C O doub N N 254 THR C OXT sing N N 255 THR CB OG1 sing N N 256 THR CB CG2 sing N N 257 THR CB HB sing N N 258 THR OG1 HG1 sing N N 259 THR CG2 HG21 sing N N 260 THR CG2 HG22 sing N N 261 THR CG2 HG23 sing N N 262 THR OXT HXT sing N N 263 TRP N CA sing N N 264 TRP N H sing N N 265 TRP N H2 sing N N 266 TRP CA C sing N N 267 TRP CA CB sing N N 268 TRP CA HA sing N N 269 TRP C O doub N N 270 TRP C OXT sing N N 271 TRP CB CG sing N N 272 TRP CB HB2 sing N N 273 TRP CB HB3 sing N N 274 TRP CG CD1 doub Y N 275 TRP CG CD2 sing Y N 276 TRP CD1 NE1 sing Y N 277 TRP CD1 HD1 sing N N 278 TRP CD2 CE2 doub Y N 279 TRP CD2 CE3 sing Y N 280 TRP NE1 CE2 sing Y N 281 TRP NE1 HE1 sing N N 282 TRP CE2 CZ2 sing Y N 283 TRP CE3 CZ3 doub Y N 284 TRP CE3 HE3 sing N N 285 TRP CZ2 CH2 doub Y N 286 TRP CZ2 HZ2 sing N N 287 TRP CZ3 CH2 sing Y N 288 TRP CZ3 HZ3 sing N N 289 TRP CH2 HH2 sing N N 290 TRP OXT HXT sing N N 291 VAL N CA sing N N 292 VAL N H sing N N 293 VAL N H2 sing N N 294 VAL CA C sing N N 295 VAL CA CB sing N N 296 VAL CA HA sing N N 297 VAL C O doub N N 298 VAL C OXT sing N N 299 VAL CB CG1 sing N N 300 VAL CB CG2 sing N N 301 VAL CB HB sing N N 302 VAL CG1 HG11 sing N N 303 VAL CG1 HG12 sing N N 304 VAL CG1 HG13 sing N N 305 VAL CG2 HG21 sing N N 306 VAL CG2 HG22 sing N N 307 VAL CG2 HG23 sing N N 308 VAL OXT HXT sing N N 309 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'the Science and Technology Program of Guangzhou' China 201504010025 1 'the Fundamental Research Funds for the Central Universities' China 16lgjc76 2 'Guangdong Innovative Research Team Program' China 'NO. 2011Y038' 3 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5CKF _pdbx_initial_refinement_model.details ? #