data_5XG5 # _entry.id 5XG5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5XG5 pdb_00005xg5 10.2210/pdb5xg5/pdb WWPDB D_1300002972 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-07-12 2 'Structure model' 1 1 2017-08-30 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2024-03-27 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Structure summary' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Database references' 9 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' diffrn_detector 4 3 'Structure model' atom_site 5 3 'Structure model' chem_comp 6 3 'Structure model' entity 7 3 'Structure model' pdbx_chem_comp_identifier 8 3 'Structure model' pdbx_entity_nonpoly 9 3 'Structure model' struct_site 10 3 'Structure model' struct_site_gen 11 4 'Structure model' chem_comp 12 4 'Structure model' chem_comp_atom 13 4 'Structure model' chem_comp_bond 14 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_diffrn_detector.detector' 13 3 'Structure model' '_atom_site.auth_atom_id' 14 3 'Structure model' '_atom_site.label_atom_id' 15 3 'Structure model' '_chem_comp.name' 16 3 'Structure model' '_chem_comp.type' 17 3 'Structure model' '_entity.pdbx_description' 18 3 'Structure model' '_pdbx_entity_nonpoly.name' 19 4 'Structure model' '_chem_comp.pdbx_synonyms' 20 4 'Structure model' '_database_2.pdbx_DOI' 21 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5XG5 _pdbx_database_status.recvd_initial_deposition_date 2017-04-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Terada, D.' 1 ? 'Voet, A.R.D.' 2 ? 'Kamata, K.' 3 ? 'Zhang, K.Y.J.' 4 ? 'Tame, J.R.H.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Sci Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2045-2322 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 7 _citation.language ? _citation.page_first 5943 _citation.page_last 5943 _citation.title 'Computational design of a symmetrical beta-trefoil lectin with cancer cell binding activity.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41598-017-06332-7 _citation.pdbx_database_id_PubMed 28724971 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Terada, D.' 1 ? primary 'Voet, A.R.D.' 2 ? primary 'Noguchi, H.' 3 ? primary 'Kamata, K.' 4 ? primary 'Ohki, M.' 5 ? primary 'Addy, C.' 6 ? primary 'Fujii, Y.' 7 ? primary 'Yamamoto, D.' 8 ? primary 'Ozeki, Y.' 9 ? primary 'Tame, J.R.H.' 10 ? primary 'Zhang, K.Y.J.' 11 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn MITSUBA-1 16442.629 1 ? ? ? ? 2 non-polymer man 2-acetamido-2-deoxy-alpha-D-galactopyranose 221.208 3 ? ? ? ? 3 water nat water 18.015 133 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;HMDGYYKIKHKASGKFVHPKGGSSNPPNDTNLVLHSDKHERMLFQFVDLGDGYYKIKHKASGKFVHPKGGSSNPPNDTNL VLHSDKHERMLFQFVDLGDGYYKIKHKASGKFVHPKGGSSNPPNDTNLVLHSDKHERMLFQFVDL ; _entity_poly.pdbx_seq_one_letter_code_can ;HMDGYYKIKHKASGKFVHPKGGSSNPPNDTNLVLHSDKHERMLFQFVDLGDGYYKIKHKASGKFVHPKGGSSNPPNDTNL VLHSDKHERMLFQFVDLGDGYYKIKHKASGKFVHPKGGSSNPPNDTNLVLHSDKHERMLFQFVDL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-alpha-D-galactopyranose A2G 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 MET n 1 3 ASP n 1 4 GLY n 1 5 TYR n 1 6 TYR n 1 7 LYS n 1 8 ILE n 1 9 LYS n 1 10 HIS n 1 11 LYS n 1 12 ALA n 1 13 SER n 1 14 GLY n 1 15 LYS n 1 16 PHE n 1 17 VAL n 1 18 HIS n 1 19 PRO n 1 20 LYS n 1 21 GLY n 1 22 GLY n 1 23 SER n 1 24 SER n 1 25 ASN n 1 26 PRO n 1 27 PRO n 1 28 ASN n 1 29 ASP n 1 30 THR n 1 31 ASN n 1 32 LEU n 1 33 VAL n 1 34 LEU n 1 35 HIS n 1 36 SER n 1 37 ASP n 1 38 LYS n 1 39 HIS n 1 40 GLU n 1 41 ARG n 1 42 MET n 1 43 LEU n 1 44 PHE n 1 45 GLN n 1 46 PHE n 1 47 VAL n 1 48 ASP n 1 49 LEU n 1 50 GLY n 1 51 ASP n 1 52 GLY n 1 53 TYR n 1 54 TYR n 1 55 LYS n 1 56 ILE n 1 57 LYS n 1 58 HIS n 1 59 LYS n 1 60 ALA n 1 61 SER n 1 62 GLY n 1 63 LYS n 1 64 PHE n 1 65 VAL n 1 66 HIS n 1 67 PRO n 1 68 LYS n 1 69 GLY n 1 70 GLY n 1 71 SER n 1 72 SER n 1 73 ASN n 1 74 PRO n 1 75 PRO n 1 76 ASN n 1 77 ASP n 1 78 THR n 1 79 ASN n 1 80 LEU n 1 81 VAL n 1 82 LEU n 1 83 HIS n 1 84 SER n 1 85 ASP n 1 86 LYS n 1 87 HIS n 1 88 GLU n 1 89 ARG n 1 90 MET n 1 91 LEU n 1 92 PHE n 1 93 GLN n 1 94 PHE n 1 95 VAL n 1 96 ASP n 1 97 LEU n 1 98 GLY n 1 99 ASP n 1 100 GLY n 1 101 TYR n 1 102 TYR n 1 103 LYS n 1 104 ILE n 1 105 LYS n 1 106 HIS n 1 107 LYS n 1 108 ALA n 1 109 SER n 1 110 GLY n 1 111 LYS n 1 112 PHE n 1 113 VAL n 1 114 HIS n 1 115 PRO n 1 116 LYS n 1 117 GLY n 1 118 GLY n 1 119 SER n 1 120 SER n 1 121 ASN n 1 122 PRO n 1 123 PRO n 1 124 ASN n 1 125 ASP n 1 126 THR n 1 127 ASN n 1 128 LEU n 1 129 VAL n 1 130 LEU n 1 131 HIS n 1 132 SER n 1 133 ASP n 1 134 LYS n 1 135 HIS n 1 136 GLU n 1 137 ARG n 1 138 MET n 1 139 LEU n 1 140 PHE n 1 141 GLN n 1 142 PHE n 1 143 VAL n 1 144 ASP n 1 145 LEU n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 145 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A2G 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-galactopyranose ;N-acetyl-alpha-D-galactosamine; 2-acetamido-2-deoxy-alpha-D-galactose; 2-acetamido-2-deoxy-D-galactose; 2-acetamido-2-deoxy-galactose; N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE ; 'C8 H15 N O6' 221.208 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A2G 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpNAca A2G 'COMMON NAME' GMML 1.0 N-acetyl-a-D-galactopyranosamine A2G 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GalpNAc A2G 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 -1 -1 HIS HIS A . n A 1 2 MET 2 0 0 MET MET A . n A 1 3 ASP 3 1 1 ASP ASP A . n A 1 4 GLY 4 2 2 GLY GLY A . n A 1 5 TYR 5 3 3 TYR TYR A . n A 1 6 TYR 6 4 4 TYR TYR A . n A 1 7 LYS 7 5 5 LYS LYS A . n A 1 8 ILE 8 6 6 ILE ILE A . n A 1 9 LYS 9 7 7 LYS LYS A . n A 1 10 HIS 10 8 8 HIS HIS A . n A 1 11 LYS 11 9 9 LYS LYS A . n A 1 12 ALA 12 10 10 ALA ALA A . n A 1 13 SER 13 11 11 SER SER A . n A 1 14 GLY 14 12 12 GLY GLY A . n A 1 15 LYS 15 13 13 LYS LYS A . n A 1 16 PHE 16 14 14 PHE PHE A . n A 1 17 VAL 17 15 15 VAL VAL A . n A 1 18 HIS 18 16 16 HIS HIS A . n A 1 19 PRO 19 17 17 PRO PRO A . n A 1 20 LYS 20 18 18 LYS LYS A . n A 1 21 GLY 21 19 19 GLY GLY A . n A 1 22 GLY 22 20 20 GLY GLY A . n A 1 23 SER 23 21 21 SER SER A . n A 1 24 SER 24 22 22 SER SER A . n A 1 25 ASN 25 23 23 ASN ASN A . n A 1 26 PRO 26 24 24 PRO PRO A . n A 1 27 PRO 27 25 25 PRO PRO A . n A 1 28 ASN 28 26 26 ASN ASN A . n A 1 29 ASP 29 27 27 ASP ASP A . n A 1 30 THR 30 28 28 THR THR A . n A 1 31 ASN 31 29 29 ASN ASN A . n A 1 32 LEU 32 30 30 LEU LEU A . n A 1 33 VAL 33 31 31 VAL VAL A . n A 1 34 LEU 34 32 32 LEU LEU A . n A 1 35 HIS 35 33 33 HIS HIS A . n A 1 36 SER 36 34 34 SER SER A . n A 1 37 ASP 37 35 35 ASP ASP A . n A 1 38 LYS 38 36 36 LYS LYS A . n A 1 39 HIS 39 37 37 HIS HIS A . n A 1 40 GLU 40 38 38 GLU GLU A . n A 1 41 ARG 41 39 39 ARG ARG A . n A 1 42 MET 42 40 40 MET MET A . n A 1 43 LEU 43 41 41 LEU LEU A . n A 1 44 PHE 44 42 42 PHE PHE A . n A 1 45 GLN 45 43 43 GLN GLN A . n A 1 46 PHE 46 44 44 PHE PHE A . n A 1 47 VAL 47 45 45 VAL VAL A . n A 1 48 ASP 48 46 46 ASP ASP A . n A 1 49 LEU 49 47 47 LEU LEU A . n A 1 50 GLY 50 48 48 GLY GLY A . n A 1 51 ASP 51 49 49 ASP ASP A . n A 1 52 GLY 52 50 50 GLY GLY A . n A 1 53 TYR 53 51 51 TYR TYR A . n A 1 54 TYR 54 52 52 TYR TYR A . n A 1 55 LYS 55 53 53 LYS LYS A . n A 1 56 ILE 56 54 54 ILE ILE A . n A 1 57 LYS 57 55 55 LYS LYS A . n A 1 58 HIS 58 56 56 HIS HIS A . n A 1 59 LYS 59 57 57 LYS LYS A . n A 1 60 ALA 60 58 58 ALA ALA A . n A 1 61 SER 61 59 59 SER SER A . n A 1 62 GLY 62 60 60 GLY GLY A . n A 1 63 LYS 63 61 61 LYS LYS A . n A 1 64 PHE 64 62 62 PHE PHE A . n A 1 65 VAL 65 63 63 VAL VAL A . n A 1 66 HIS 66 64 64 HIS HIS A . n A 1 67 PRO 67 65 65 PRO PRO A . n A 1 68 LYS 68 66 66 LYS LYS A . n A 1 69 GLY 69 67 67 GLY GLY A . n A 1 70 GLY 70 68 68 GLY GLY A . n A 1 71 SER 71 69 69 SER SER A . n A 1 72 SER 72 70 70 SER SER A . n A 1 73 ASN 73 71 71 ASN ASN A . n A 1 74 PRO 74 72 72 PRO PRO A . n A 1 75 PRO 75 73 73 PRO PRO A . n A 1 76 ASN 76 74 74 ASN ASN A . n A 1 77 ASP 77 75 75 ASP ASP A . n A 1 78 THR 78 76 76 THR THR A . n A 1 79 ASN 79 77 77 ASN ASN A . n A 1 80 LEU 80 78 78 LEU LEU A . n A 1 81 VAL 81 79 79 VAL VAL A . n A 1 82 LEU 82 80 80 LEU LEU A . n A 1 83 HIS 83 81 81 HIS HIS A . n A 1 84 SER 84 82 82 SER SER A . n A 1 85 ASP 85 83 83 ASP ASP A . n A 1 86 LYS 86 84 84 LYS LYS A . n A 1 87 HIS 87 85 85 HIS HIS A . n A 1 88 GLU 88 86 86 GLU GLU A . n A 1 89 ARG 89 87 87 ARG ARG A . n A 1 90 MET 90 88 88 MET MET A . n A 1 91 LEU 91 89 89 LEU LEU A . n A 1 92 PHE 92 90 90 PHE PHE A . n A 1 93 GLN 93 91 91 GLN GLN A . n A 1 94 PHE 94 92 92 PHE PHE A . n A 1 95 VAL 95 93 93 VAL VAL A . n A 1 96 ASP 96 94 94 ASP ASP A . n A 1 97 LEU 97 95 95 LEU LEU A . n A 1 98 GLY 98 96 96 GLY GLY A . n A 1 99 ASP 99 97 97 ASP ASP A . n A 1 100 GLY 100 98 98 GLY GLY A . n A 1 101 TYR 101 99 99 TYR TYR A . n A 1 102 TYR 102 100 100 TYR TYR A . n A 1 103 LYS 103 101 101 LYS LYS A . n A 1 104 ILE 104 102 102 ILE ILE A . n A 1 105 LYS 105 103 103 LYS LYS A . n A 1 106 HIS 106 104 104 HIS HIS A . n A 1 107 LYS 107 105 105 LYS LYS A . n A 1 108 ALA 108 106 106 ALA ALA A . n A 1 109 SER 109 107 107 SER SER A . n A 1 110 GLY 110 108 108 GLY GLY A . n A 1 111 LYS 111 109 109 LYS LYS A . n A 1 112 PHE 112 110 110 PHE PHE A . n A 1 113 VAL 113 111 111 VAL VAL A . n A 1 114 HIS 114 112 112 HIS HIS A . n A 1 115 PRO 115 113 113 PRO PRO A . n A 1 116 LYS 116 114 114 LYS LYS A . n A 1 117 GLY 117 115 115 GLY GLY A . n A 1 118 GLY 118 116 116 GLY GLY A . n A 1 119 SER 119 117 117 SER SER A . n A 1 120 SER 120 118 118 SER SER A . n A 1 121 ASN 121 119 119 ASN ASN A . n A 1 122 PRO 122 120 120 PRO PRO A . n A 1 123 PRO 123 121 121 PRO PRO A . n A 1 124 ASN 124 122 122 ASN ASN A . n A 1 125 ASP 125 123 123 ASP ASP A . n A 1 126 THR 126 124 124 THR THR A . n A 1 127 ASN 127 125 125 ASN ASN A . n A 1 128 LEU 128 126 126 LEU LEU A . n A 1 129 VAL 129 127 127 VAL VAL A . n A 1 130 LEU 130 128 128 LEU LEU A . n A 1 131 HIS 131 129 129 HIS HIS A . n A 1 132 SER 132 130 130 SER SER A . n A 1 133 ASP 133 131 131 ASP ASP A . n A 1 134 LYS 134 132 132 LYS LYS A . n A 1 135 HIS 135 133 133 HIS HIS A . n A 1 136 GLU 136 134 134 GLU GLU A . n A 1 137 ARG 137 135 135 ARG ARG A . n A 1 138 MET 138 136 136 MET MET A . n A 1 139 LEU 139 137 137 LEU LEU A . n A 1 140 PHE 140 138 138 PHE PHE A . n A 1 141 GLN 141 139 139 GLN GLN A . n A 1 142 PHE 142 140 140 PHE PHE A . n A 1 143 VAL 143 141 141 VAL VAL A . n A 1 144 ASP 144 142 142 ASP ASP A . n A 1 145 LEU 145 143 143 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A2G 1 201 1 A2G A2G A . C 2 A2G 1 202 2 A2G A2G A . D 2 A2G 1 203 3 A2G A2G A . E 3 HOH 1 301 140 HOH HOH A . E 3 HOH 2 302 34 HOH HOH A . E 3 HOH 3 303 114 HOH HOH A . E 3 HOH 4 304 112 HOH HOH A . E 3 HOH 5 305 91 HOH HOH A . E 3 HOH 6 306 32 HOH HOH A . E 3 HOH 7 307 78 HOH HOH A . E 3 HOH 8 308 66 HOH HOH A . E 3 HOH 9 309 28 HOH HOH A . E 3 HOH 10 310 53 HOH HOH A . E 3 HOH 11 311 97 HOH HOH A . E 3 HOH 12 312 150 HOH HOH A . E 3 HOH 13 313 20 HOH HOH A . E 3 HOH 14 314 26 HOH HOH A . E 3 HOH 15 315 21 HOH HOH A . E 3 HOH 16 316 5 HOH HOH A . E 3 HOH 17 317 104 HOH HOH A . E 3 HOH 18 318 130 HOH HOH A . E 3 HOH 19 319 59 HOH HOH A . E 3 HOH 20 320 16 HOH HOH A . E 3 HOH 21 321 50 HOH HOH A . E 3 HOH 22 322 151 HOH HOH A . E 3 HOH 23 323 8 HOH HOH A . E 3 HOH 24 324 106 HOH HOH A . E 3 HOH 25 325 87 HOH HOH A . E 3 HOH 26 326 121 HOH HOH A . E 3 HOH 27 327 4 HOH HOH A . E 3 HOH 28 328 1 HOH HOH A . E 3 HOH 29 329 45 HOH HOH A . E 3 HOH 30 330 141 HOH HOH A . E 3 HOH 31 331 111 HOH HOH A . E 3 HOH 32 332 138 HOH HOH A . E 3 HOH 33 333 76 HOH HOH A . E 3 HOH 34 334 10 HOH HOH A . E 3 HOH 35 335 162 HOH HOH A . E 3 HOH 36 336 57 HOH HOH A . E 3 HOH 37 337 29 HOH HOH A . E 3 HOH 38 338 6 HOH HOH A . E 3 HOH 39 339 145 HOH HOH A . E 3 HOH 40 340 41 HOH HOH A . E 3 HOH 41 341 15 HOH HOH A . E 3 HOH 42 342 52 HOH HOH A . E 3 HOH 43 343 7 HOH HOH A . E 3 HOH 44 344 128 HOH HOH A . E 3 HOH 45 345 38 HOH HOH A . E 3 HOH 46 346 14 HOH HOH A . E 3 HOH 47 347 13 HOH HOH A . E 3 HOH 48 348 122 HOH HOH A . E 3 HOH 49 349 23 HOH HOH A . E 3 HOH 50 350 37 HOH HOH A . E 3 HOH 51 351 47 HOH HOH A . E 3 HOH 52 352 96 HOH HOH A . E 3 HOH 53 353 139 HOH HOH A . E 3 HOH 54 354 79 HOH HOH A . E 3 HOH 55 355 17 HOH HOH A . E 3 HOH 56 356 2 HOH HOH A . E 3 HOH 57 357 27 HOH HOH A . E 3 HOH 58 358 35 HOH HOH A . E 3 HOH 59 359 18 HOH HOH A . E 3 HOH 60 360 36 HOH HOH A . E 3 HOH 61 361 107 HOH HOH A . E 3 HOH 62 362 102 HOH HOH A . E 3 HOH 63 363 68 HOH HOH A . E 3 HOH 64 364 137 HOH HOH A . E 3 HOH 65 365 42 HOH HOH A . E 3 HOH 66 366 31 HOH HOH A . E 3 HOH 67 367 119 HOH HOH A . E 3 HOH 68 368 24 HOH HOH A . E 3 HOH 69 369 148 HOH HOH A . E 3 HOH 70 370 146 HOH HOH A . E 3 HOH 71 371 25 HOH HOH A . E 3 HOH 72 372 100 HOH HOH A . E 3 HOH 73 373 95 HOH HOH A . E 3 HOH 74 374 9 HOH HOH A . E 3 HOH 75 375 30 HOH HOH A . E 3 HOH 76 376 56 HOH HOH A . E 3 HOH 77 377 58 HOH HOH A . E 3 HOH 78 378 90 HOH HOH A . E 3 HOH 79 379 61 HOH HOH A . E 3 HOH 80 380 3 HOH HOH A . E 3 HOH 81 381 19 HOH HOH A . E 3 HOH 82 382 129 HOH HOH A . E 3 HOH 83 383 118 HOH HOH A . E 3 HOH 84 384 132 HOH HOH A . E 3 HOH 85 385 33 HOH HOH A . E 3 HOH 86 386 81 HOH HOH A . E 3 HOH 87 387 105 HOH HOH A . E 3 HOH 88 388 159 HOH HOH A . E 3 HOH 89 389 70 HOH HOH A . E 3 HOH 90 390 93 HOH HOH A . E 3 HOH 91 391 123 HOH HOH A . E 3 HOH 92 392 108 HOH HOH A . E 3 HOH 93 393 117 HOH HOH A . E 3 HOH 94 394 43 HOH HOH A . E 3 HOH 95 395 11 HOH HOH A . E 3 HOH 96 396 88 HOH HOH A . E 3 HOH 97 397 39 HOH HOH A . E 3 HOH 98 398 116 HOH HOH A . E 3 HOH 99 399 82 HOH HOH A . E 3 HOH 100 400 135 HOH HOH A . E 3 HOH 101 401 143 HOH HOH A . E 3 HOH 102 402 40 HOH HOH A . E 3 HOH 103 403 22 HOH HOH A . E 3 HOH 104 404 136 HOH HOH A . E 3 HOH 105 405 86 HOH HOH A . E 3 HOH 106 406 89 HOH HOH A . E 3 HOH 107 407 147 HOH HOH A . E 3 HOH 108 408 154 HOH HOH A . E 3 HOH 109 409 142 HOH HOH A . E 3 HOH 110 410 94 HOH HOH A . E 3 HOH 111 411 156 HOH HOH A . E 3 HOH 112 412 120 HOH HOH A . E 3 HOH 113 413 12 HOH HOH A . E 3 HOH 114 414 103 HOH HOH A . E 3 HOH 115 415 83 HOH HOH A . E 3 HOH 116 416 115 HOH HOH A . E 3 HOH 117 417 161 HOH HOH A . E 3 HOH 118 418 113 HOH HOH A . E 3 HOH 119 419 144 HOH HOH A . E 3 HOH 120 420 99 HOH HOH A . E 3 HOH 121 421 127 HOH HOH A . E 3 HOH 122 422 109 HOH HOH A . E 3 HOH 123 423 84 HOH HOH A . E 3 HOH 124 424 85 HOH HOH A . E 3 HOH 125 425 163 HOH HOH A . E 3 HOH 126 426 125 HOH HOH A . E 3 HOH 127 427 133 HOH HOH A . E 3 HOH 128 428 160 HOH HOH A . E 3 HOH 129 429 80 HOH HOH A . E 3 HOH 130 430 131 HOH HOH A . E 3 HOH 131 431 157 HOH HOH A . E 3 HOH 132 432 134 HOH HOH A . E 3 HOH 133 433 158 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.7.0029 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DENZO ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 97.560 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5XG5 _cell.details ? _cell.formula_units_Z ? _cell.length_a 42.782 _cell.length_a_esd ? _cell.length_b 38.677 _cell.length_b_esd ? _cell.length_c 42.761 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XG5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5XG5 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.13 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 42.33 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M MES pH 6.5, 25 % PEG 6000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 97 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-10-25 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-17A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.98 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL-17A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5XG5 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.54 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 19585 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 94.500 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.900 _reflns.pdbx_Rmerge_I_obs 0.063 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 17.900 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 2.867 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.075 _reflns.pdbx_Rpim_I_all 0.040 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.550 1.580 ? ? ? ? ? ? ? 85.300 ? ? ? ? 0.215 ? ? ? ? ? ? ? ? 2.100 ? 1.306 ? ? 0.272 0.163 ? 1 1 0.901 ? 1.580 1.610 ? ? ? ? ? ? ? 86.100 ? ? ? ? 0.188 ? ? ? ? ? ? ? ? 2.300 ? 1.433 ? ? 0.237 0.141 ? 2 1 0.912 ? 1.610 1.640 ? ? ? ? ? ? ? 89.600 ? ? ? ? 0.199 ? ? ? ? ? ? ? ? 2.400 ? 1.594 ? ? 0.248 0.145 ? 3 1 0.899 ? 1.640 1.670 ? ? ? ? ? ? ? 91.500 ? ? ? ? 0.175 ? ? ? ? ? ? ? ? 2.400 ? 1.539 ? ? 0.218 0.127 ? 4 1 0.936 ? 1.670 1.710 ? ? ? ? ? ? ? 92.400 ? ? ? ? 0.161 ? ? ? ? ? ? ? ? 2.500 ? 1.764 ? ? 0.201 0.117 ? 5 1 0.939 ? 1.710 1.750 ? ? ? ? ? ? ? 91.400 ? ? ? ? 0.153 ? ? ? ? ? ? ? ? 2.400 ? 2.108 ? ? 0.192 0.114 ? 6 1 0.939 ? 1.750 1.790 ? ? ? ? ? ? ? 92.700 ? ? ? ? 0.135 ? ? ? ? ? ? ? ? 2.700 ? 2.092 ? ? 0.167 0.096 ? 7 1 0.959 ? 1.790 1.840 ? ? ? ? ? ? ? 94.300 ? ? ? ? 0.119 ? ? ? ? ? ? ? ? 2.700 ? 2.219 ? ? 0.147 0.083 ? 8 1 0.970 ? 1.840 1.890 ? ? ? ? ? ? ? 96.800 ? ? ? ? 0.110 ? ? ? ? ? ? ? ? 3.000 ? 2.375 ? ? 0.134 0.075 ? 9 1 0.972 ? 1.890 1.950 ? ? ? ? ? ? ? 96.100 ? ? ? ? 0.103 ? ? ? ? ? ? ? ? 3.100 ? 2.751 ? ? 0.124 0.068 ? 10 1 0.981 ? 1.950 2.020 ? ? ? ? ? ? ? 96.700 ? ? ? ? 0.094 ? ? ? ? ? ? ? ? 3.100 ? 2.948 ? ? 0.113 0.061 ? 11 1 0.982 ? 2.020 2.100 ? ? ? ? ? ? ? 97.200 ? ? ? ? 0.085 ? ? ? ? ? ? ? ? 3.100 ? 3.045 ? ? 0.102 0.056 ? 12 1 0.985 ? 2.100 2.200 ? ? ? ? ? ? ? 97.100 ? ? ? ? 0.080 ? ? ? ? ? ? ? ? 2.900 ? 3.382 ? ? 0.097 0.054 ? 13 1 0.985 ? 2.200 2.320 ? ? ? ? ? ? ? 96.400 ? ? ? ? 0.078 ? ? ? ? ? ? ? ? 3.200 ? 3.449 ? ? 0.093 0.050 ? 14 1 0.988 ? 2.320 2.460 ? ? ? ? ? ? ? 97.500 ? ? ? ? 0.070 ? ? ? ? ? ? ? ? 3.300 ? 3.491 ? ? 0.084 0.045 ? 15 1 0.990 ? 2.460 2.650 ? ? ? ? ? ? ? 99.000 ? ? ? ? 0.067 ? ? ? ? ? ? ? ? 3.400 ? 3.638 ? ? 0.079 0.042 ? 16 1 0.992 ? 2.650 2.920 ? ? ? ? ? ? ? 97.700 ? ? ? ? 0.062 ? ? ? ? ? ? ? ? 3.400 ? 3.571 ? ? 0.073 0.039 ? 17 1 0.991 ? 2.920 3.340 ? ? ? ? ? ? ? 96.900 ? ? ? ? 0.057 ? ? ? ? ? ? ? ? 3.300 ? 3.748 ? ? 0.068 0.036 ? 18 1 0.991 ? 3.340 4.210 ? ? ? ? ? ? ? 98.200 ? ? ? ? 0.046 ? ? ? ? ? ? ? ? 3.500 ? 3.437 ? ? 0.054 0.028 ? 19 1 0.996 ? 4.210 50.000 ? ? ? ? ? ? ? 96.600 ? ? ? ? 0.045 ? ? ? ? ? ? ? ? 3.400 ? 3.353 ? ? 0.053 0.028 ? 20 1 0.995 ? # _refine.aniso_B[1][1] -0.7100 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] -0.7500 _refine.aniso_B[2][3] -0.0000 _refine.aniso_B[3][3] 1.3600 _refine.B_iso_max 57.280 _refine.B_iso_mean 14.3980 _refine.B_iso_min 5.800 _refine.correlation_coeff_Fo_to_Fc 0.9670 _refine.correlation_coeff_Fo_to_Fc_free 0.9430 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5XG5 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.54 _refine.ls_d_res_low 42.4100 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 18576 _refine.ls_number_reflns_R_free 1004 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 93.7800 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1521 _refine.ls_R_factor_R_free 0.1973 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1497 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.0760 _refine.pdbx_overall_ESU_R_Free 0.0850 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 1.2320 _refine.overall_SU_ML 0.0460 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.54 _refine_hist.d_res_low 42.4100 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 133 _refine_hist.number_atoms_total 1338 _refine_hist.pdbx_number_residues_total 145 _refine_hist.pdbx_B_iso_mean_ligand 14.29 _refine_hist.pdbx_B_iso_mean_solvent 27.51 _refine_hist.pdbx_number_atoms_protein 1160 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.022 0.019 1241 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 1153 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.194 1.979 1670 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.005 3.000 2682 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 8.571 5.000 144 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 28.495 24.138 58 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 13.769 15.000 208 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 22.996 15.000 3 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.158 0.200 173 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.014 0.021 1374 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 298 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.5360 _refine_ls_shell.d_res_low 1.5760 _refine_ls_shell.number_reflns_all 1163 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 65 _refine_ls_shell.number_reflns_R_work 1098 _refine_ls_shell.percent_reflns_obs 76.6600 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2130 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.1780 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5XG5 _struct.title 'Crystal structure of Mitsuba-1 with bound NAcGal' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5XG5 _struct_keywords.text 'protein design, lectin, de novo protein, sugar binding protein' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5XG5 _struct_ref.pdbx_db_accession 5XG5 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5XG5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 145 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5XG5 _struct_ref_seq.db_align_beg -1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 143 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -1 _struct_ref_seq.pdbx_auth_seq_align_end 143 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1070 ? 1 MORE 11 ? 1 'SSA (A^2)' 6640 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 HIS A 39 ? MET A 42 ? HIS A 37 MET A 40 5 ? 4 HELX_P HELX_P2 AA2 HIS A 87 ? MET A 90 ? HIS A 85 MET A 88 5 ? 4 HELX_P HELX_P3 AA3 HIS A 135 ? MET A 138 ? HIS A 133 MET A 136 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 4 ? C ? 4 ? D ? 4 ? E ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 6 ? HIS A 10 ? TYR A 4 HIS A 8 A 2 PHE A 140 ? ASP A 144 ? PHE A 138 ASP A 142 B 1 PHE A 16 ? PRO A 19 ? PHE A 14 PRO A 17 B 2 THR A 30 ? HIS A 35 ? THR A 28 HIS A 33 B 3 THR A 78 ? HIS A 83 ? THR A 76 HIS A 81 B 4 PHE A 64 ? PRO A 67 ? PHE A 62 PRO A 65 C 1 PHE A 16 ? PRO A 19 ? PHE A 14 PRO A 17 C 2 THR A 30 ? HIS A 35 ? THR A 28 HIS A 33 C 3 THR A 126 ? HIS A 131 ? THR A 124 HIS A 129 C 4 PHE A 112 ? PRO A 115 ? PHE A 110 PRO A 113 D 1 PHE A 64 ? PRO A 67 ? PHE A 62 PRO A 65 D 2 THR A 78 ? HIS A 83 ? THR A 76 HIS A 81 D 3 THR A 126 ? HIS A 131 ? THR A 124 HIS A 129 D 4 PHE A 112 ? PRO A 115 ? PHE A 110 PRO A 113 E 1 PHE A 44 ? GLY A 50 ? PHE A 42 GLY A 48 E 2 TYR A 53 ? HIS A 58 ? TYR A 51 HIS A 56 E 3 PHE A 92 ? ASP A 96 ? PHE A 90 ASP A 94 E 4 TYR A 102 ? HIS A 106 ? TYR A 100 HIS A 104 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 9 ? N LYS A 7 O GLN A 141 ? O GLN A 139 B 1 2 N HIS A 18 ? N HIS A 16 O VAL A 33 ? O VAL A 31 B 2 3 N LEU A 32 ? N LEU A 30 O LEU A 80 ? O LEU A 78 B 3 4 O VAL A 81 ? O VAL A 79 N HIS A 66 ? N HIS A 64 C 1 2 N HIS A 18 ? N HIS A 16 O VAL A 33 ? O VAL A 31 C 2 3 N LEU A 32 ? N LEU A 30 O LEU A 128 ? O LEU A 126 C 3 4 O VAL A 129 ? O VAL A 127 N HIS A 114 ? N HIS A 112 D 1 2 N HIS A 66 ? N HIS A 64 O VAL A 81 ? O VAL A 79 D 2 3 N LEU A 80 ? N LEU A 78 O LEU A 128 ? O LEU A 126 D 3 4 O VAL A 129 ? O VAL A 127 N HIS A 114 ? N HIS A 112 E 1 2 N VAL A 47 ? N VAL A 45 O LYS A 55 ? O LYS A 53 E 2 3 N TYR A 54 ? N TYR A 52 O PHE A 92 ? O PHE A 90 E 3 4 N GLN A 93 ? N GLN A 91 O LYS A 105 ? O LYS A 103 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 388 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 417 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_645 _pdbx_validate_symm_contact.dist 1.29 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 27 ? ? CG A ASP 27 ? ? OD1 A ASP 27 ? ? 124.92 118.30 6.62 0.90 N 2 1 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH1 A ARG 39 ? ? 123.59 120.30 3.29 0.50 N 3 1 CB A ASP 83 ? ? CG A ASP 83 ? ? OD1 A ASP 83 ? ? 125.15 118.30 6.85 0.90 N 4 1 NE A ARG 87 ? ? CZ A ARG 87 ? ? NH1 A ARG 87 ? ? 116.42 120.30 -3.88 0.50 N 5 1 NE A ARG 135 ? ? CZ A ARG 135 ? ? NH2 A ARG 135 ? ? 125.57 120.30 5.27 0.50 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A2G O5 O N N 1 A2G C1 C N S 2 A2G O1 O N N 3 A2G C2 C N R 4 A2G N2 N N N 5 A2G C3 C N R 6 A2G O3 O N N 7 A2G C4 C N R 8 A2G O4 O N N 9 A2G C5 C N R 10 A2G C6 C N N 11 A2G O6 O N N 12 A2G C7 C N N 13 A2G O7 O N N 14 A2G C8 C N N 15 A2G H1 H N N 16 A2G HO1 H N N 17 A2G H2 H N N 18 A2G HN2 H N N 19 A2G H3 H N N 20 A2G HO3 H N N 21 A2G H4 H N N 22 A2G HO4 H N N 23 A2G H5 H N N 24 A2G H61 H N N 25 A2G H81 H N N 26 A2G H82 H N N 27 A2G H83 H N N 28 A2G H62 H N N 29 A2G HO6 H N N 30 ALA N N N N 31 ALA CA C N S 32 ALA C C N N 33 ALA O O N N 34 ALA CB C N N 35 ALA OXT O N N 36 ALA H H N N 37 ALA H2 H N N 38 ALA HA H N N 39 ALA HB1 H N N 40 ALA HB2 H N N 41 ALA HB3 H N N 42 ALA HXT H N N 43 ARG N N N N 44 ARG CA C N S 45 ARG C C N N 46 ARG O O N N 47 ARG CB C N N 48 ARG CG C N N 49 ARG CD C N N 50 ARG NE N N N 51 ARG CZ C N N 52 ARG NH1 N N N 53 ARG NH2 N N N 54 ARG OXT O N N 55 ARG H H N N 56 ARG H2 H N N 57 ARG HA H N N 58 ARG HB2 H N N 59 ARG HB3 H N N 60 ARG HG2 H N N 61 ARG HG3 H N N 62 ARG HD2 H N N 63 ARG HD3 H N N 64 ARG HE H N N 65 ARG HH11 H N N 66 ARG HH12 H N N 67 ARG HH21 H N N 68 ARG HH22 H N N 69 ARG HXT H N N 70 ASN N N N N 71 ASN CA C N S 72 ASN C C N N 73 ASN O O N N 74 ASN CB C N N 75 ASN CG C N N 76 ASN OD1 O N N 77 ASN ND2 N N N 78 ASN OXT O N N 79 ASN H H N N 80 ASN H2 H N N 81 ASN HA H N N 82 ASN HB2 H N N 83 ASN HB3 H N N 84 ASN HD21 H N N 85 ASN HD22 H N N 86 ASN HXT H N N 87 ASP N N N N 88 ASP CA C N S 89 ASP C C N N 90 ASP O O N N 91 ASP CB C N N 92 ASP CG C N N 93 ASP OD1 O N N 94 ASP OD2 O N N 95 ASP OXT O N N 96 ASP H H N N 97 ASP H2 H N N 98 ASP HA H N N 99 ASP HB2 H N N 100 ASP HB3 H N N 101 ASP HD2 H N N 102 ASP HXT H N N 103 GLN N N N N 104 GLN CA C N S 105 GLN C C N N 106 GLN O O N N 107 GLN CB C N N 108 GLN CG C N N 109 GLN CD C N N 110 GLN OE1 O N N 111 GLN NE2 N N N 112 GLN OXT O N N 113 GLN H H N N 114 GLN H2 H N N 115 GLN HA H N N 116 GLN HB2 H N N 117 GLN HB3 H N N 118 GLN HG2 H N N 119 GLN HG3 H N N 120 GLN HE21 H N N 121 GLN HE22 H N N 122 GLN HXT H N N 123 GLU N N N N 124 GLU CA C N S 125 GLU C C N N 126 GLU O O N N 127 GLU CB C N N 128 GLU CG C N N 129 GLU CD C N N 130 GLU OE1 O N N 131 GLU OE2 O N N 132 GLU OXT O N N 133 GLU H H N N 134 GLU H2 H N N 135 GLU HA H N N 136 GLU HB2 H N N 137 GLU HB3 H N N 138 GLU HG2 H N N 139 GLU HG3 H N N 140 GLU HE2 H N N 141 GLU HXT H N N 142 GLY N N N N 143 GLY CA C N N 144 GLY C C N N 145 GLY O O N N 146 GLY OXT O N N 147 GLY H H N N 148 GLY H2 H N N 149 GLY HA2 H N N 150 GLY HA3 H N N 151 GLY HXT H N N 152 HIS N N N N 153 HIS CA C N S 154 HIS C C N N 155 HIS O O N N 156 HIS CB C N N 157 HIS CG C Y N 158 HIS ND1 N Y N 159 HIS CD2 C Y N 160 HIS CE1 C Y N 161 HIS NE2 N Y N 162 HIS OXT O N N 163 HIS H H N N 164 HIS H2 H N N 165 HIS HA H N N 166 HIS HB2 H N N 167 HIS HB3 H N N 168 HIS HD1 H N N 169 HIS HD2 H N N 170 HIS HE1 H N N 171 HIS HE2 H N N 172 HIS HXT H N N 173 HOH O O N N 174 HOH H1 H N N 175 HOH H2 H N N 176 ILE N N N N 177 ILE CA C N S 178 ILE C C N N 179 ILE O O N N 180 ILE CB C N S 181 ILE CG1 C N N 182 ILE CG2 C N N 183 ILE CD1 C N N 184 ILE OXT O N N 185 ILE H H N N 186 ILE H2 H N N 187 ILE HA H N N 188 ILE HB H N N 189 ILE HG12 H N N 190 ILE HG13 H N N 191 ILE HG21 H N N 192 ILE HG22 H N N 193 ILE HG23 H N N 194 ILE HD11 H N N 195 ILE HD12 H N N 196 ILE HD13 H N N 197 ILE HXT H N N 198 LEU N N N N 199 LEU CA C N S 200 LEU C C N N 201 LEU O O N N 202 LEU CB C N N 203 LEU CG C N N 204 LEU CD1 C N N 205 LEU CD2 C N N 206 LEU OXT O N N 207 LEU H H N N 208 LEU H2 H N N 209 LEU HA H N N 210 LEU HB2 H N N 211 LEU HB3 H N N 212 LEU HG H N N 213 LEU HD11 H N N 214 LEU HD12 H N N 215 LEU HD13 H N N 216 LEU HD21 H N N 217 LEU HD22 H N N 218 LEU HD23 H N N 219 LEU HXT H N N 220 LYS N N N N 221 LYS CA C N S 222 LYS C C N N 223 LYS O O N N 224 LYS CB C N N 225 LYS CG C N N 226 LYS CD C N N 227 LYS CE C N N 228 LYS NZ N N N 229 LYS OXT O N N 230 LYS H H N N 231 LYS H2 H N N 232 LYS HA H N N 233 LYS HB2 H N N 234 LYS HB3 H N N 235 LYS HG2 H N N 236 LYS HG3 H N N 237 LYS HD2 H N N 238 LYS HD3 H N N 239 LYS HE2 H N N 240 LYS HE3 H N N 241 LYS HZ1 H N N 242 LYS HZ2 H N N 243 LYS HZ3 H N N 244 LYS HXT H N N 245 MET N N N N 246 MET CA C N S 247 MET C C N N 248 MET O O N N 249 MET CB C N N 250 MET CG C N N 251 MET SD S N N 252 MET CE C N N 253 MET OXT O N N 254 MET H H N N 255 MET H2 H N N 256 MET HA H N N 257 MET HB2 H N N 258 MET HB3 H N N 259 MET HG2 H N N 260 MET HG3 H N N 261 MET HE1 H N N 262 MET HE2 H N N 263 MET HE3 H N N 264 MET HXT H N N 265 PHE N N N N 266 PHE CA C N S 267 PHE C C N N 268 PHE O O N N 269 PHE CB C N N 270 PHE CG C Y N 271 PHE CD1 C Y N 272 PHE CD2 C Y N 273 PHE CE1 C Y N 274 PHE CE2 C Y N 275 PHE CZ C Y N 276 PHE OXT O N N 277 PHE H H N N 278 PHE H2 H N N 279 PHE HA H N N 280 PHE HB2 H N N 281 PHE HB3 H N N 282 PHE HD1 H N N 283 PHE HD2 H N N 284 PHE HE1 H N N 285 PHE HE2 H N N 286 PHE HZ H N N 287 PHE HXT H N N 288 PRO N N N N 289 PRO CA C N S 290 PRO C C N N 291 PRO O O N N 292 PRO CB C N N 293 PRO CG C N N 294 PRO CD C N N 295 PRO OXT O N N 296 PRO H H N N 297 PRO HA H N N 298 PRO HB2 H N N 299 PRO HB3 H N N 300 PRO HG2 H N N 301 PRO HG3 H N N 302 PRO HD2 H N N 303 PRO HD3 H N N 304 PRO HXT H N N 305 SER N N N N 306 SER CA C N S 307 SER C C N N 308 SER O O N N 309 SER CB C N N 310 SER OG O N N 311 SER OXT O N N 312 SER H H N N 313 SER H2 H N N 314 SER HA H N N 315 SER HB2 H N N 316 SER HB3 H N N 317 SER HG H N N 318 SER HXT H N N 319 THR N N N N 320 THR CA C N S 321 THR C C N N 322 THR O O N N 323 THR CB C N R 324 THR OG1 O N N 325 THR CG2 C N N 326 THR OXT O N N 327 THR H H N N 328 THR H2 H N N 329 THR HA H N N 330 THR HB H N N 331 THR HG1 H N N 332 THR HG21 H N N 333 THR HG22 H N N 334 THR HG23 H N N 335 THR HXT H N N 336 TYR N N N N 337 TYR CA C N S 338 TYR C C N N 339 TYR O O N N 340 TYR CB C N N 341 TYR CG C Y N 342 TYR CD1 C Y N 343 TYR CD2 C Y N 344 TYR CE1 C Y N 345 TYR CE2 C Y N 346 TYR CZ C Y N 347 TYR OH O N N 348 TYR OXT O N N 349 TYR H H N N 350 TYR H2 H N N 351 TYR HA H N N 352 TYR HB2 H N N 353 TYR HB3 H N N 354 TYR HD1 H N N 355 TYR HD2 H N N 356 TYR HE1 H N N 357 TYR HE2 H N N 358 TYR HH H N N 359 TYR HXT H N N 360 VAL N N N N 361 VAL CA C N S 362 VAL C C N N 363 VAL O O N N 364 VAL CB C N N 365 VAL CG1 C N N 366 VAL CG2 C N N 367 VAL OXT O N N 368 VAL H H N N 369 VAL H2 H N N 370 VAL HA H N N 371 VAL HB H N N 372 VAL HG11 H N N 373 VAL HG12 H N N 374 VAL HG13 H N N 375 VAL HG21 H N N 376 VAL HG22 H N N 377 VAL HG23 H N N 378 VAL HXT H N N 379 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A2G O5 C5 sing N N 1 A2G C1 O5 sing N N 2 A2G C1 C2 sing N N 3 A2G C1 H1 sing N N 4 A2G O1 C1 sing N N 5 A2G O1 HO1 sing N N 6 A2G C2 C3 sing N N 7 A2G C2 H2 sing N N 8 A2G N2 C2 sing N N 9 A2G N2 HN2 sing N N 10 A2G C3 C4 sing N N 11 A2G C3 O3 sing N N 12 A2G C3 H3 sing N N 13 A2G O3 HO3 sing N N 14 A2G C4 O4 sing N N 15 A2G C4 H4 sing N N 16 A2G O4 HO4 sing N N 17 A2G C5 C4 sing N N 18 A2G C5 C6 sing N N 19 A2G C5 H5 sing N N 20 A2G C6 O6 sing N N 21 A2G C6 H61 sing N N 22 A2G C7 N2 sing N N 23 A2G O7 C7 doub N N 24 A2G C8 C7 sing N N 25 A2G C8 H81 sing N N 26 A2G C8 H82 sing N N 27 A2G C8 H83 sing N N 28 A2G C6 H62 sing N N 29 A2G O6 HO6 sing N N 30 ALA N CA sing N N 31 ALA N H sing N N 32 ALA N H2 sing N N 33 ALA CA C sing N N 34 ALA CA CB sing N N 35 ALA CA HA sing N N 36 ALA C O doub N N 37 ALA C OXT sing N N 38 ALA CB HB1 sing N N 39 ALA CB HB2 sing N N 40 ALA CB HB3 sing N N 41 ALA OXT HXT sing N N 42 ARG N CA sing N N 43 ARG N H sing N N 44 ARG N H2 sing N N 45 ARG CA C sing N N 46 ARG CA CB sing N N 47 ARG CA HA sing N N 48 ARG C O doub N N 49 ARG C OXT sing N N 50 ARG CB CG sing N N 51 ARG CB HB2 sing N N 52 ARG CB HB3 sing N N 53 ARG CG CD sing N N 54 ARG CG HG2 sing N N 55 ARG CG HG3 sing N N 56 ARG CD NE sing N N 57 ARG CD HD2 sing N N 58 ARG CD HD3 sing N N 59 ARG NE CZ sing N N 60 ARG NE HE sing N N 61 ARG CZ NH1 sing N N 62 ARG CZ NH2 doub N N 63 ARG NH1 HH11 sing N N 64 ARG NH1 HH12 sing N N 65 ARG NH2 HH21 sing N N 66 ARG NH2 HH22 sing N N 67 ARG OXT HXT sing N N 68 ASN N CA sing N N 69 ASN N H sing N N 70 ASN N H2 sing N N 71 ASN CA C sing N N 72 ASN CA CB sing N N 73 ASN CA HA sing N N 74 ASN C O doub N N 75 ASN C OXT sing N N 76 ASN CB CG sing N N 77 ASN CB HB2 sing N N 78 ASN CB HB3 sing N N 79 ASN CG OD1 doub N N 80 ASN CG ND2 sing N N 81 ASN ND2 HD21 sing N N 82 ASN ND2 HD22 sing N N 83 ASN OXT HXT sing N N 84 ASP N CA sing N N 85 ASP N H sing N N 86 ASP N H2 sing N N 87 ASP CA C sing N N 88 ASP CA CB sing N N 89 ASP CA HA sing N N 90 ASP C O doub N N 91 ASP C OXT sing N N 92 ASP CB CG sing N N 93 ASP CB HB2 sing N N 94 ASP CB HB3 sing N N 95 ASP CG OD1 doub N N 96 ASP CG OD2 sing N N 97 ASP OD2 HD2 sing N N 98 ASP OXT HXT sing N N 99 GLN N CA sing N N 100 GLN N H sing N N 101 GLN N H2 sing N N 102 GLN CA C sing N N 103 GLN CA CB sing N N 104 GLN CA HA sing N N 105 GLN C O doub N N 106 GLN C OXT sing N N 107 GLN CB CG sing N N 108 GLN CB HB2 sing N N 109 GLN CB HB3 sing N N 110 GLN CG CD sing N N 111 GLN CG HG2 sing N N 112 GLN CG HG3 sing N N 113 GLN CD OE1 doub N N 114 GLN CD NE2 sing N N 115 GLN NE2 HE21 sing N N 116 GLN NE2 HE22 sing N N 117 GLN OXT HXT sing N N 118 GLU N CA sing N N 119 GLU N H sing N N 120 GLU N H2 sing N N 121 GLU CA C sing N N 122 GLU CA CB sing N N 123 GLU CA HA sing N N 124 GLU C O doub N N 125 GLU C OXT sing N N 126 GLU CB CG sing N N 127 GLU CB HB2 sing N N 128 GLU CB HB3 sing N N 129 GLU CG CD sing N N 130 GLU CG HG2 sing N N 131 GLU CG HG3 sing N N 132 GLU CD OE1 doub N N 133 GLU CD OE2 sing N N 134 GLU OE2 HE2 sing N N 135 GLU OXT HXT sing N N 136 GLY N CA sing N N 137 GLY N H sing N N 138 GLY N H2 sing N N 139 GLY CA C sing N N 140 GLY CA HA2 sing N N 141 GLY CA HA3 sing N N 142 GLY C O doub N N 143 GLY C OXT sing N N 144 GLY OXT HXT sing N N 145 HIS N CA sing N N 146 HIS N H sing N N 147 HIS N H2 sing N N 148 HIS CA C sing N N 149 HIS CA CB sing N N 150 HIS CA HA sing N N 151 HIS C O doub N N 152 HIS C OXT sing N N 153 HIS CB CG sing N N 154 HIS CB HB2 sing N N 155 HIS CB HB3 sing N N 156 HIS CG ND1 sing Y N 157 HIS CG CD2 doub Y N 158 HIS ND1 CE1 doub Y N 159 HIS ND1 HD1 sing N N 160 HIS CD2 NE2 sing Y N 161 HIS CD2 HD2 sing N N 162 HIS CE1 NE2 sing Y N 163 HIS CE1 HE1 sing N N 164 HIS NE2 HE2 sing N N 165 HIS OXT HXT sing N N 166 HOH O H1 sing N N 167 HOH O H2 sing N N 168 ILE N CA sing N N 169 ILE N H sing N N 170 ILE N H2 sing N N 171 ILE CA C sing N N 172 ILE CA CB sing N N 173 ILE CA HA sing N N 174 ILE C O doub N N 175 ILE C OXT sing N N 176 ILE CB CG1 sing N N 177 ILE CB CG2 sing N N 178 ILE CB HB sing N N 179 ILE CG1 CD1 sing N N 180 ILE CG1 HG12 sing N N 181 ILE CG1 HG13 sing N N 182 ILE CG2 HG21 sing N N 183 ILE CG2 HG22 sing N N 184 ILE CG2 HG23 sing N N 185 ILE CD1 HD11 sing N N 186 ILE CD1 HD12 sing N N 187 ILE CD1 HD13 sing N N 188 ILE OXT HXT sing N N 189 LEU N CA sing N N 190 LEU N H sing N N 191 LEU N H2 sing N N 192 LEU CA C sing N N 193 LEU CA CB sing N N 194 LEU CA HA sing N N 195 LEU C O doub N N 196 LEU C OXT sing N N 197 LEU CB CG sing N N 198 LEU CB HB2 sing N N 199 LEU CB HB3 sing N N 200 LEU CG CD1 sing N N 201 LEU CG CD2 sing N N 202 LEU CG HG sing N N 203 LEU CD1 HD11 sing N N 204 LEU CD1 HD12 sing N N 205 LEU CD1 HD13 sing N N 206 LEU CD2 HD21 sing N N 207 LEU CD2 HD22 sing N N 208 LEU CD2 HD23 sing N N 209 LEU OXT HXT sing N N 210 LYS N CA sing N N 211 LYS N H sing N N 212 LYS N H2 sing N N 213 LYS CA C sing N N 214 LYS CA CB sing N N 215 LYS CA HA sing N N 216 LYS C O doub N N 217 LYS C OXT sing N N 218 LYS CB CG sing N N 219 LYS CB HB2 sing N N 220 LYS CB HB3 sing N N 221 LYS CG CD sing N N 222 LYS CG HG2 sing N N 223 LYS CG HG3 sing N N 224 LYS CD CE sing N N 225 LYS CD HD2 sing N N 226 LYS CD HD3 sing N N 227 LYS CE NZ sing N N 228 LYS CE HE2 sing N N 229 LYS CE HE3 sing N N 230 LYS NZ HZ1 sing N N 231 LYS NZ HZ2 sing N N 232 LYS NZ HZ3 sing N N 233 LYS OXT HXT sing N N 234 MET N CA sing N N 235 MET N H sing N N 236 MET N H2 sing N N 237 MET CA C sing N N 238 MET CA CB sing N N 239 MET CA HA sing N N 240 MET C O doub N N 241 MET C OXT sing N N 242 MET CB CG sing N N 243 MET CB HB2 sing N N 244 MET CB HB3 sing N N 245 MET CG SD sing N N 246 MET CG HG2 sing N N 247 MET CG HG3 sing N N 248 MET SD CE sing N N 249 MET CE HE1 sing N N 250 MET CE HE2 sing N N 251 MET CE HE3 sing N N 252 MET OXT HXT sing N N 253 PHE N CA sing N N 254 PHE N H sing N N 255 PHE N H2 sing N N 256 PHE CA C sing N N 257 PHE CA CB sing N N 258 PHE CA HA sing N N 259 PHE C O doub N N 260 PHE C OXT sing N N 261 PHE CB CG sing N N 262 PHE CB HB2 sing N N 263 PHE CB HB3 sing N N 264 PHE CG CD1 doub Y N 265 PHE CG CD2 sing Y N 266 PHE CD1 CE1 sing Y N 267 PHE CD1 HD1 sing N N 268 PHE CD2 CE2 doub Y N 269 PHE CD2 HD2 sing N N 270 PHE CE1 CZ doub Y N 271 PHE CE1 HE1 sing N N 272 PHE CE2 CZ sing Y N 273 PHE CE2 HE2 sing N N 274 PHE CZ HZ sing N N 275 PHE OXT HXT sing N N 276 PRO N CA sing N N 277 PRO N CD sing N N 278 PRO N H sing N N 279 PRO CA C sing N N 280 PRO CA CB sing N N 281 PRO CA HA sing N N 282 PRO C O doub N N 283 PRO C OXT sing N N 284 PRO CB CG sing N N 285 PRO CB HB2 sing N N 286 PRO CB HB3 sing N N 287 PRO CG CD sing N N 288 PRO CG HG2 sing N N 289 PRO CG HG3 sing N N 290 PRO CD HD2 sing N N 291 PRO CD HD3 sing N N 292 PRO OXT HXT sing N N 293 SER N CA sing N N 294 SER N H sing N N 295 SER N H2 sing N N 296 SER CA C sing N N 297 SER CA CB sing N N 298 SER CA HA sing N N 299 SER C O doub N N 300 SER C OXT sing N N 301 SER CB OG sing N N 302 SER CB HB2 sing N N 303 SER CB HB3 sing N N 304 SER OG HG sing N N 305 SER OXT HXT sing N N 306 THR N CA sing N N 307 THR N H sing N N 308 THR N H2 sing N N 309 THR CA C sing N N 310 THR CA CB sing N N 311 THR CA HA sing N N 312 THR C O doub N N 313 THR C OXT sing N N 314 THR CB OG1 sing N N 315 THR CB CG2 sing N N 316 THR CB HB sing N N 317 THR OG1 HG1 sing N N 318 THR CG2 HG21 sing N N 319 THR CG2 HG22 sing N N 320 THR CG2 HG23 sing N N 321 THR OXT HXT sing N N 322 TYR N CA sing N N 323 TYR N H sing N N 324 TYR N H2 sing N N 325 TYR CA C sing N N 326 TYR CA CB sing N N 327 TYR CA HA sing N N 328 TYR C O doub N N 329 TYR C OXT sing N N 330 TYR CB CG sing N N 331 TYR CB HB2 sing N N 332 TYR CB HB3 sing N N 333 TYR CG CD1 doub Y N 334 TYR CG CD2 sing Y N 335 TYR CD1 CE1 sing Y N 336 TYR CD1 HD1 sing N N 337 TYR CD2 CE2 doub Y N 338 TYR CD2 HD2 sing N N 339 TYR CE1 CZ doub Y N 340 TYR CE1 HE1 sing N N 341 TYR CE2 CZ sing Y N 342 TYR CE2 HE2 sing N N 343 TYR CZ OH sing N N 344 TYR OH HH sing N N 345 TYR OXT HXT sing N N 346 VAL N CA sing N N 347 VAL N H sing N N 348 VAL N H2 sing N N 349 VAL CA C sing N N 350 VAL CA CB sing N N 351 VAL CA HA sing N N 352 VAL C O doub N N 353 VAL C OXT sing N N 354 VAL CB CG1 sing N N 355 VAL CB CG2 sing N N 356 VAL CB HB sing N N 357 VAL CG1 HG11 sing N N 358 VAL CG1 HG12 sing N N 359 VAL CG1 HG13 sing N N 360 VAL CG2 HG21 sing N N 361 VAL CG2 HG22 sing N N 362 VAL CG2 HG23 sing N N 363 VAL OXT HXT sing N N 364 # _atom_sites.entry_id 5XG5 _atom_sites.fract_transf_matrix[1][1] 0.023374 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003103 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025855 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023591 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_