HEADER HYDROLASE INHIBITOR 17-MAY-17 5XN4 TITLE ANTI-CRISPR PROTEIN ACRIIA4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTI-CRISPR ACRIIA4; COMPND 3 CHAIN: X; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES; SOURCE 3 ORGANISM_TAXID: 1639; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CAS9 INHIBITOR, HYDROLASE INHIBITOR EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.-Y.SUH,I.KIM REVDAT 2 14-JUN-23 5XN4 1 REMARK REVDAT 1 28-MAR-18 5XN4 0 JRNL AUTH I.KIM,M.JEONG,D.KA,M.HAN,N.K.KIM,E.BAE,J.Y.SUH JRNL TITL SOLUTION STRUCTURE AND DYNAMICS OF ANTI-CRISPR ACRIIA4, THE JRNL TITL 2 CAS9 INHIBITOR. JRNL REF SCI REP V. 8 3883 2018 JRNL REFN ESSN 2045-2322 JRNL PMID 29497118 JRNL DOI 10.1038/S41598-018-22177-0 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5XN4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1300003768. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.4 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 2.0 MM [U-99% 13C; U-99% 15N] REMARK 210 ACRIIA4, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D CBCA(CO)NH; REMARK 210 3D HNCACB; 3D HBHA(CO)NH; 3D REMARK 210 HNCO; 3D 1H-13C NOESY; 3D 1H-13C REMARK 210 NOESY AROMATIC; 3D 1H-15N NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : PIPP REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER X 46 O GLU X 49 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER X 20 -151.52 -79.28 REMARK 500 1 SER X 26 -81.87 -107.20 REMARK 500 1 TYR X 67 113.12 -170.11 REMARK 500 1 GLU X 85 9.11 -68.71 REMARK 500 2 SER X 26 -82.61 -116.67 REMARK 500 2 ILE X 27 -150.08 -143.43 REMARK 500 2 GLU X 47 -17.63 -48.49 REMARK 500 2 GLN X 65 -8.13 -56.31 REMARK 500 2 TYR X 67 113.73 -164.88 REMARK 500 3 SER X 26 -90.36 -116.16 REMARK 500 3 ASN X 36 -5.61 -57.06 REMARK 500 3 GLU X 47 -15.13 -50.00 REMARK 500 3 GLN X 65 -9.59 -54.46 REMARK 500 3 TYR X 67 112.14 -163.94 REMARK 500 3 LEU X 86 94.48 -69.55 REMARK 500 4 SER X 26 -77.82 -102.12 REMARK 500 5 SER X 26 -79.48 -104.04 REMARK 500 5 ASN X 36 -7.14 -52.02 REMARK 500 5 GLN X 65 -9.43 -57.43 REMARK 500 5 TYR X 67 110.41 -162.60 REMARK 500 5 GLU X 85 7.36 -66.85 REMARK 500 6 SER X 26 -90.57 -105.59 REMARK 500 6 GLU X 85 14.24 -66.97 REMARK 500 7 SER X 26 -89.73 -102.47 REMARK 500 7 ILE X 27 -150.53 -142.47 REMARK 500 7 TYR X 67 115.25 -172.00 REMARK 500 7 ASP X 69 -6.65 -57.10 REMARK 500 7 GLU X 85 32.59 -76.85 REMARK 500 8 SER X 26 -93.42 -105.82 REMARK 500 8 ASP X 69 1.53 -62.70 REMARK 500 9 SER X 20 170.13 -58.72 REMARK 500 9 SER X 26 -91.46 -108.93 REMARK 500 9 ASN X 36 -5.94 -57.16 REMARK 500 9 GLN X 65 -9.81 -55.28 REMARK 500 10 SER X 20 -165.46 -74.61 REMARK 500 10 SER X 26 -84.81 -76.32 REMARK 500 10 GLN X 65 -9.90 -54.45 REMARK 500 10 TYR X 67 108.69 -161.08 REMARK 500 10 LEU X 86 84.22 -61.29 REMARK 500 11 SER X 26 -77.50 -114.55 REMARK 500 11 ASN X 36 -6.38 -58.66 REMARK 500 11 GLN X 65 -10.70 -48.97 REMARK 500 11 GLU X 85 2.63 -68.37 REMARK 500 12 SER X 20 -169.09 -77.65 REMARK 500 12 SER X 26 -80.72 -98.47 REMARK 500 12 GLU X 85 33.01 -74.97 REMARK 500 12 LEU X 86 -9.99 -59.17 REMARK 500 13 SER X 20 -165.09 -72.52 REMARK 500 13 SER X 26 -81.97 -92.82 REMARK 500 13 TYR X 67 114.53 -173.57 REMARK 500 REMARK 500 THIS ENTRY HAS 75 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36085 RELATED DB: BMRB REMARK 900 ANTI-CRISPR PROTEIN ACRIIA4 DBREF 5XN4 X 1 87 PDB 5XN4 5XN4 1 87 SEQRES 1 X 87 MET ASN ILE ASN ASP LEU ILE ARG GLU ILE LYS ASN LYS SEQRES 2 X 87 ASP TYR THR VAL LYS LEU SER GLY THR ASP SER ASN SER SEQRES 3 X 87 ILE THR GLN LEU ILE ILE ARG VAL ASN ASN ASP GLY ASN SEQRES 4 X 87 GLU TYR VAL ILE SER GLU SER GLU ASN GLU SER ILE VAL SEQRES 5 X 87 GLU LYS PHE ILE SER ALA PHE LYS ASN GLY TRP ASN GLN SEQRES 6 X 87 GLU TYR GLU ASP GLU GLU GLU PHE TYR ASN ASP MET GLN SEQRES 7 X 87 THR ILE THR LEU LYS SER GLU LEU ASN HELIX 1 AA1 ASN X 2 LYS X 13 1 12 HELIX 2 AA2 GLY X 21 ASN X 25 5 5 HELIX 3 AA3 SER X 50 ASN X 61 1 12 HELIX 4 AA4 TYR X 67 ASP X 69 5 3 HELIX 5 AA5 GLU X 70 GLU X 85 1 16 SHEET 1 AA1 3 VAL X 17 LEU X 19 0 SHEET 2 AA1 3 GLN X 29 ASN X 35 -1 O ILE X 31 N LYS X 18 SHEET 3 AA1 3 ASN X 39 SER X 44 -1 O ASN X 39 N ASN X 35 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1