data_5XWS # _entry.id 5XWS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5XWS WWPDB D_1300004291 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5XWS _pdbx_database_status.recvd_initial_deposition_date 2017-06-30 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Goto-Ito, S.' 1 ? 'Yamagata, A.' 2 ? 'Sato, Y.' 3 ? 'Fukai, S.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 9 _citation.language ? _citation.page_first 269 _citation.page_last 269 _citation.title 'Structural basis of trans-synaptic interactions between PTP delta and SALMs for inducing synapse formation.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-017-02417-z _citation.pdbx_database_id_PubMed 29348429 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Goto-Ito, S.' 1 ? primary 'Yamagata, A.' 2 ? primary 'Sato, Y.' 3 ? primary 'Uemura, T.' 4 ? primary 'Shiroshima, T.' 5 ? primary 'Maeda, A.' 6 ? primary 'Imai, A.' 7 ? primary 'Mori, H.' 8 ? primary 'Yoshida, T.' 9 ? primary 'Fukai, S.' 10 ? # _cell.entry_id 5XWS _cell.length_a 154.888 _cell.length_b 154.888 _cell.length_c 91.262 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XWS _symmetry.space_group_name_H-M 'P 63 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Leucine-rich repeat and fibronectin type-III domain-containing protein 5' 41383.496 1 ? ? 'UNP residues 18-379' ? 2 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;QICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFAD LRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLS LDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGNPLHCNCELLWLRRLSRE DDLETCASPPLLTGRYFWSIPEEEFLCEPPLITRHTHEMRVLEGQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVY DNGTLDILITTVKDTGAFTCIASNPAGEATQIVDLHIIKLPHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;QICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFAD LRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLS LDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGNPLHCNCELLWLRRLSRE DDLETCASPPLLTGRYFWSIPEEEFLCEPPLITRHTHEMRVLEGQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVY DNGTLDILITTVKDTGAFTCIASNPAGEATQIVDLHIIKLPHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 ILE n 1 3 CYS n 1 4 PRO n 1 5 LYS n 1 6 ARG n 1 7 CYS n 1 8 VAL n 1 9 CYS n 1 10 GLN n 1 11 ILE n 1 12 LEU n 1 13 SER n 1 14 PRO n 1 15 ASN n 1 16 LEU n 1 17 ALA n 1 18 THR n 1 19 LEU n 1 20 CYS n 1 21 ALA n 1 22 LYS n 1 23 LYS n 1 24 GLY n 1 25 LEU n 1 26 LEU n 1 27 PHE n 1 28 VAL n 1 29 PRO n 1 30 PRO n 1 31 ASN n 1 32 ILE n 1 33 ASP n 1 34 ARG n 1 35 ARG n 1 36 THR n 1 37 VAL n 1 38 GLU n 1 39 LEU n 1 40 ARG n 1 41 LEU n 1 42 ALA n 1 43 ASP n 1 44 ASN n 1 45 PHE n 1 46 VAL n 1 47 THR n 1 48 ASN n 1 49 ILE n 1 50 LYS n 1 51 ARG n 1 52 LYS n 1 53 ASP n 1 54 PHE n 1 55 ALA n 1 56 ASN n 1 57 MET n 1 58 THR n 1 59 SER n 1 60 LEU n 1 61 VAL n 1 62 ASP n 1 63 LEU n 1 64 THR n 1 65 LEU n 1 66 SER n 1 67 ARG n 1 68 ASN n 1 69 THR n 1 70 ILE n 1 71 SER n 1 72 PHE n 1 73 ILE n 1 74 THR n 1 75 PRO n 1 76 HIS n 1 77 ALA n 1 78 PHE n 1 79 ALA n 1 80 ASP n 1 81 LEU n 1 82 ARG n 1 83 ASN n 1 84 LEU n 1 85 ARG n 1 86 ALA n 1 87 LEU n 1 88 HIS n 1 89 LEU n 1 90 ASN n 1 91 SER n 1 92 ASN n 1 93 ARG n 1 94 LEU n 1 95 THR n 1 96 LYS n 1 97 ILE n 1 98 THR n 1 99 ASN n 1 100 ASP n 1 101 MET n 1 102 PHE n 1 103 SER n 1 104 GLY n 1 105 LEU n 1 106 SER n 1 107 ASN n 1 108 LEU n 1 109 HIS n 1 110 HIS n 1 111 LEU n 1 112 ILE n 1 113 LEU n 1 114 ASN n 1 115 ASN n 1 116 ASN n 1 117 GLN n 1 118 LEU n 1 119 THR n 1 120 LEU n 1 121 ILE n 1 122 SER n 1 123 SER n 1 124 THR n 1 125 ALA n 1 126 PHE n 1 127 ASP n 1 128 ASP n 1 129 VAL n 1 130 PHE n 1 131 ALA n 1 132 LEU n 1 133 GLU n 1 134 GLU n 1 135 LEU n 1 136 ASP n 1 137 LEU n 1 138 SER n 1 139 TYR n 1 140 ASN n 1 141 ASN n 1 142 LEU n 1 143 GLU n 1 144 THR n 1 145 ILE n 1 146 PRO n 1 147 TRP n 1 148 ASP n 1 149 ALA n 1 150 VAL n 1 151 GLU n 1 152 LYS n 1 153 MET n 1 154 VAL n 1 155 SER n 1 156 LEU n 1 157 HIS n 1 158 THR n 1 159 LEU n 1 160 SER n 1 161 LEU n 1 162 ASP n 1 163 HIS n 1 164 ASN n 1 165 MET n 1 166 ILE n 1 167 ASP n 1 168 ASN n 1 169 ILE n 1 170 PRO n 1 171 LYS n 1 172 GLY n 1 173 THR n 1 174 PHE n 1 175 SER n 1 176 HIS n 1 177 LEU n 1 178 HIS n 1 179 LYS n 1 180 MET n 1 181 THR n 1 182 ARG n 1 183 LEU n 1 184 ASP n 1 185 VAL n 1 186 THR n 1 187 SER n 1 188 ASN n 1 189 LYS n 1 190 LEU n 1 191 GLN n 1 192 LYS n 1 193 LEU n 1 194 PRO n 1 195 PRO n 1 196 ASP n 1 197 PRO n 1 198 LEU n 1 199 PHE n 1 200 GLN n 1 201 ARG n 1 202 ALA n 1 203 GLN n 1 204 VAL n 1 205 LEU n 1 206 ALA n 1 207 THR n 1 208 SER n 1 209 GLY n 1 210 ILE n 1 211 ILE n 1 212 SER n 1 213 PRO n 1 214 SER n 1 215 THR n 1 216 PHE n 1 217 ALA n 1 218 LEU n 1 219 SER n 1 220 PHE n 1 221 GLY n 1 222 GLY n 1 223 ASN n 1 224 PRO n 1 225 LEU n 1 226 HIS n 1 227 CYS n 1 228 ASN n 1 229 CYS n 1 230 GLU n 1 231 LEU n 1 232 LEU n 1 233 TRP n 1 234 LEU n 1 235 ARG n 1 236 ARG n 1 237 LEU n 1 238 SER n 1 239 ARG n 1 240 GLU n 1 241 ASP n 1 242 ASP n 1 243 LEU n 1 244 GLU n 1 245 THR n 1 246 CYS n 1 247 ALA n 1 248 SER n 1 249 PRO n 1 250 PRO n 1 251 LEU n 1 252 LEU n 1 253 THR n 1 254 GLY n 1 255 ARG n 1 256 TYR n 1 257 PHE n 1 258 TRP n 1 259 SER n 1 260 ILE n 1 261 PRO n 1 262 GLU n 1 263 GLU n 1 264 GLU n 1 265 PHE n 1 266 LEU n 1 267 CYS n 1 268 GLU n 1 269 PRO n 1 270 PRO n 1 271 LEU n 1 272 ILE n 1 273 THR n 1 274 ARG n 1 275 HIS n 1 276 THR n 1 277 HIS n 1 278 GLU n 1 279 MET n 1 280 ARG n 1 281 VAL n 1 282 LEU n 1 283 GLU n 1 284 GLY n 1 285 GLN n 1 286 ARG n 1 287 ALA n 1 288 THR n 1 289 LEU n 1 290 ARG n 1 291 CYS n 1 292 LYS n 1 293 ALA n 1 294 ARG n 1 295 GLY n 1 296 ASP n 1 297 PRO n 1 298 GLU n 1 299 PRO n 1 300 ALA n 1 301 ILE n 1 302 HIS n 1 303 TRP n 1 304 ILE n 1 305 SER n 1 306 PRO n 1 307 GLU n 1 308 GLY n 1 309 LYS n 1 310 LEU n 1 311 ILE n 1 312 SER n 1 313 ASN n 1 314 ALA n 1 315 THR n 1 316 ARG n 1 317 SER n 1 318 LEU n 1 319 VAL n 1 320 TYR n 1 321 ASP n 1 322 ASN n 1 323 GLY n 1 324 THR n 1 325 LEU n 1 326 ASP n 1 327 ILE n 1 328 LEU n 1 329 ILE n 1 330 THR n 1 331 THR n 1 332 VAL n 1 333 LYS n 1 334 ASP n 1 335 THR n 1 336 GLY n 1 337 ALA n 1 338 PHE n 1 339 THR n 1 340 CYS n 1 341 ILE n 1 342 ALA n 1 343 SER n 1 344 ASN n 1 345 PRO n 1 346 ALA n 1 347 GLY n 1 348 GLU n 1 349 ALA n 1 350 THR n 1 351 GLN n 1 352 ILE n 1 353 VAL n 1 354 ASP n 1 355 LEU n 1 356 HIS n 1 357 ILE n 1 358 ILE n 1 359 LYS n 1 360 LEU n 1 361 PRO n 1 362 HIS n 1 363 HIS n 1 364 HIS n 1 365 HIS n 1 366 HIS n 1 367 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 367 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'LRFN5, C14orf146, SALM5' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LRFN5_HUMAN _struct_ref.pdbx_db_accession Q96NI6 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFAD LRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLS LDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGNPLHCNCELLWLRRLSRE DDLETCASPPLLTGRYFWSIPEEEFLCEPPLITRHTHEMRVLEGQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVY DNGTLDILITTVKDTGAFTCIASNPAGEATQIVDLHIIKLPH ; _struct_ref.pdbx_align_begin 18 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5XWS _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 362 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q96NI6 _struct_ref_seq.db_align_beg 18 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 379 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 18 _struct_ref_seq.pdbx_auth_seq_align_end 379 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5XWS HIS A 363 ? UNP Q96NI6 ? ? 'expression tag' 380 1 1 5XWS HIS A 364 ? UNP Q96NI6 ? ? 'expression tag' 381 2 1 5XWS HIS A 365 ? UNP Q96NI6 ? ? 'expression tag' 382 3 1 5XWS HIS A 366 ? UNP Q96NI6 ? ? 'expression tag' 383 4 1 5XWS HIS A 367 ? UNP Q96NI6 ? ? 'expression tag' 384 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5XWS _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.82 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 67.79 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '10% PEG 3350, 0.2M ammonium tartrate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 4M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-03-01 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-1A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL-1A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5XWS _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.1 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12254 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 16.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high . _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5XWS _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 12253 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.40 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 44.712 _refine.ls_d_res_high 3.084 _refine.ls_percent_reflns_obs 99.01 _refine.ls_R_factor_obs 0.2701 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2681 _refine.ls_R_factor_R_free 0.3084 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.98 _refine.ls_number_reflns_R_free 610 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.63 _refine.pdbx_overall_phase_error 35.58 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2153 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2181 _refine_hist.d_res_high 3.084 _refine_hist.d_res_low 44.712 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.002 ? ? 2233 'X-RAY DIFFRACTION' ? f_angle_d 0.739 ? ? 3035 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 9.966 ? ? 829 'X-RAY DIFFRACTION' ? f_chiral_restr 0.046 ? ? 365 'X-RAY DIFFRACTION' ? f_plane_restr 0.004 ? ? 386 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 3.0840 3.3942 2749 0.3326 96.00 0.3830 . . 150 . . 'X-RAY DIFFRACTION' . 3.3942 3.8851 2896 0.2726 100.00 0.2925 . . 132 . . 'X-RAY DIFFRACTION' . 3.8851 4.8939 2920 0.2331 100.00 0.2374 . . 155 . . 'X-RAY DIFFRACTION' . 4.8939 44.7170 3078 0.2741 100.00 0.3471 . . 173 . . # _struct.entry_id 5XWS _struct.title 'Crystal structure of SALM5 LRR-Ig' _struct.pdbx_descriptor 'Leucine-rich repeat and fibronectin type-III domain-containing protein 5' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5XWS _struct_keywords.text 'synaptic orgnizers, CELL ADHESION' _struct_keywords.pdbx_keywords 'CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 50 ? ALA A 55 ? LYS A 67 ALA A 72 1 ? 6 HELX_P HELX_P2 AA2 PRO A 146 ? GLU A 151 ? PRO A 163 GLU A 168 1 ? 6 HELX_P HELX_P3 AA3 ASP A 196 ? ARG A 201 ? ASP A 213 ARG A 218 1 ? 6 HELX_P HELX_P4 AA4 LEU A 231 ? ARG A 236 ? LEU A 248 ARG A 253 1 ? 6 HELX_P HELX_P5 AA5 PRO A 261 ? PHE A 265 ? PRO A 278 PHE A 282 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 9 SG ? ? A CYS 20 A CYS 26 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf2 disulf ? ? A CYS 7 SG ? ? ? 1_555 A CYS 20 SG ? ? A CYS 24 A CYS 37 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf3 disulf ? ? A CYS 227 SG ? ? ? 1_555 A CYS 246 SG ? ? A CYS 244 A CYS 263 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf4 disulf ? ? A CYS 229 SG ? ? ? 1_555 A CYS 267 SG ? ? A CYS 246 A CYS 284 1_555 ? ? ? ? ? ? ? 2.030 ? ? covale1 covale one ? A ASN 56 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 73 B NAG 1 1_555 ? ? ? ? ? ? ? 1.431 ? N-Glycosylation covale2 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.457 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 13 A . ? SER 30 A PRO 14 A ? PRO 31 A 1 -2.02 2 SER 248 A . ? SER 265 A PRO 249 A ? PRO 266 A 1 0.39 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 10 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA1 6 7 ? parallel AA1 7 8 ? parallel AA1 8 9 ? parallel AA1 9 10 ? parallel AA2 1 2 ? parallel AA3 1 2 ? parallel AA4 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 10 ? LEU A 12 ? GLN A 27 LEU A 29 AA1 2 ASN A 15 ? LEU A 19 ? ASN A 32 LEU A 36 AA1 3 GLU A 38 ? ARG A 40 ? GLU A 55 ARG A 57 AA1 4 ASP A 62 ? THR A 64 ? ASP A 79 THR A 81 AA1 5 ALA A 86 ? HIS A 88 ? ALA A 103 HIS A 105 AA1 6 HIS A 110 ? ILE A 112 ? HIS A 127 ILE A 129 AA1 7 GLU A 134 ? ASP A 136 ? GLU A 151 ASP A 153 AA1 8 THR A 158 ? SER A 160 ? THR A 175 SER A 177 AA1 9 ARG A 182 ? ASP A 184 ? ARG A 199 ASP A 201 AA1 10 ALA A 217 ? SER A 219 ? ALA A 234 SER A 236 AA2 1 ASN A 48 ? ILE A 49 ? ASN A 65 ILE A 66 AA2 2 PHE A 72 ? ILE A 73 ? PHE A 89 ILE A 90 AA3 1 LYS A 96 ? ILE A 97 ? LYS A 113 ILE A 114 AA3 2 LEU A 120 ? ILE A 121 ? LEU A 137 ILE A 138 AA4 1 LEU A 225 ? HIS A 226 ? LEU A 242 HIS A 243 AA4 2 CYS A 246 ? SER A 248 ? CYS A 263 SER A 265 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLN A 10 ? N GLN A 27 O ALA A 17 ? O ALA A 34 AA1 2 3 N THR A 18 ? N THR A 35 O GLU A 38 ? O GLU A 55 AA1 3 4 N LEU A 39 ? N LEU A 56 O THR A 64 ? O THR A 81 AA1 4 5 N LEU A 63 ? N LEU A 80 O ALA A 86 ? O ALA A 103 AA1 5 6 N LEU A 87 ? N LEU A 104 O HIS A 110 ? O HIS A 127 AA1 6 7 N LEU A 111 ? N LEU A 128 O ASP A 136 ? O ASP A 153 AA1 7 8 N LEU A 135 ? N LEU A 152 O SER A 160 ? O SER A 177 AA1 8 9 N LEU A 159 ? N LEU A 176 O ARG A 182 ? O ARG A 199 AA1 9 10 N LEU A 183 ? N LEU A 200 O ALA A 217 ? O ALA A 234 AA2 1 2 N ILE A 49 ? N ILE A 66 O PHE A 72 ? O PHE A 89 AA3 1 2 N ILE A 97 ? N ILE A 114 O LEU A 120 ? O LEU A 137 AA4 1 2 N LEU A 225 ? N LEU A 242 O ALA A 247 ? O ALA A 264 # _atom_sites.entry_id 5XWS _atom_sites.fract_transf_matrix[1][1] 0.006456 _atom_sites.fract_transf_matrix[1][2] 0.003728 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007455 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010957 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 18 ? ? ? A . n A 1 2 ILE 2 19 19 ILE ILE A . n A 1 3 CYS 3 20 20 CYS CYS A . n A 1 4 PRO 4 21 21 PRO PRO A . n A 1 5 LYS 5 22 22 LYS LYS A . n A 1 6 ARG 6 23 23 ARG ARG A . n A 1 7 CYS 7 24 24 CYS CYS A . n A 1 8 VAL 8 25 25 VAL VAL A . n A 1 9 CYS 9 26 26 CYS CYS A . n A 1 10 GLN 10 27 27 GLN GLN A . n A 1 11 ILE 11 28 28 ILE ILE A . n A 1 12 LEU 12 29 29 LEU LEU A . n A 1 13 SER 13 30 30 SER SER A . n A 1 14 PRO 14 31 31 PRO PRO A . n A 1 15 ASN 15 32 32 ASN ASN A . n A 1 16 LEU 16 33 33 LEU LEU A . n A 1 17 ALA 17 34 34 ALA ALA A . n A 1 18 THR 18 35 35 THR THR A . n A 1 19 LEU 19 36 36 LEU LEU A . n A 1 20 CYS 20 37 37 CYS CYS A . n A 1 21 ALA 21 38 38 ALA ALA A . n A 1 22 LYS 22 39 39 LYS LYS A . n A 1 23 LYS 23 40 40 LYS LYS A . n A 1 24 GLY 24 41 41 GLY GLY A . n A 1 25 LEU 25 42 42 LEU LEU A . n A 1 26 LEU 26 43 43 LEU LEU A . n A 1 27 PHE 27 44 44 PHE PHE A . n A 1 28 VAL 28 45 45 VAL VAL A . n A 1 29 PRO 29 46 46 PRO PRO A . n A 1 30 PRO 30 47 47 PRO PRO A . n A 1 31 ASN 31 48 48 ASN ASN A . n A 1 32 ILE 32 49 49 ILE ILE A . n A 1 33 ASP 33 50 50 ASP ASP A . n A 1 34 ARG 34 51 51 ARG ARG A . n A 1 35 ARG 35 52 52 ARG ARG A . n A 1 36 THR 36 53 53 THR THR A . n A 1 37 VAL 37 54 54 VAL VAL A . n A 1 38 GLU 38 55 55 GLU GLU A . n A 1 39 LEU 39 56 56 LEU LEU A . n A 1 40 ARG 40 57 57 ARG ARG A . n A 1 41 LEU 41 58 58 LEU LEU A . n A 1 42 ALA 42 59 59 ALA ALA A . n A 1 43 ASP 43 60 60 ASP ASP A . n A 1 44 ASN 44 61 61 ASN ASN A . n A 1 45 PHE 45 62 62 PHE PHE A . n A 1 46 VAL 46 63 63 VAL VAL A . n A 1 47 THR 47 64 64 THR THR A . n A 1 48 ASN 48 65 65 ASN ASN A . n A 1 49 ILE 49 66 66 ILE ILE A . n A 1 50 LYS 50 67 67 LYS LYS A . n A 1 51 ARG 51 68 68 ARG ARG A . n A 1 52 LYS 52 69 69 LYS LYS A . n A 1 53 ASP 53 70 70 ASP ASP A . n A 1 54 PHE 54 71 71 PHE PHE A . n A 1 55 ALA 55 72 72 ALA ALA A . n A 1 56 ASN 56 73 73 ASN ASN A . n A 1 57 MET 57 74 74 MET MET A . n A 1 58 THR 58 75 75 THR THR A . n A 1 59 SER 59 76 76 SER SER A . n A 1 60 LEU 60 77 77 LEU LEU A . n A 1 61 VAL 61 78 78 VAL VAL A . n A 1 62 ASP 62 79 79 ASP ASP A . n A 1 63 LEU 63 80 80 LEU LEU A . n A 1 64 THR 64 81 81 THR THR A . n A 1 65 LEU 65 82 82 LEU LEU A . n A 1 66 SER 66 83 83 SER SER A . n A 1 67 ARG 67 84 84 ARG ARG A . n A 1 68 ASN 68 85 85 ASN ASN A . n A 1 69 THR 69 86 86 THR THR A . n A 1 70 ILE 70 87 87 ILE ILE A . n A 1 71 SER 71 88 88 SER SER A . n A 1 72 PHE 72 89 89 PHE PHE A . n A 1 73 ILE 73 90 90 ILE ILE A . n A 1 74 THR 74 91 91 THR THR A . n A 1 75 PRO 75 92 92 PRO PRO A . n A 1 76 HIS 76 93 93 HIS HIS A . n A 1 77 ALA 77 94 94 ALA ALA A . n A 1 78 PHE 78 95 95 PHE PHE A . n A 1 79 ALA 79 96 96 ALA ALA A . n A 1 80 ASP 80 97 97 ASP ASP A . n A 1 81 LEU 81 98 98 LEU LEU A . n A 1 82 ARG 82 99 99 ARG ARG A . n A 1 83 ASN 83 100 100 ASN ASN A . n A 1 84 LEU 84 101 101 LEU LEU A . n A 1 85 ARG 85 102 102 ARG ARG A . n A 1 86 ALA 86 103 103 ALA ALA A . n A 1 87 LEU 87 104 104 LEU LEU A . n A 1 88 HIS 88 105 105 HIS HIS A . n A 1 89 LEU 89 106 106 LEU LEU A . n A 1 90 ASN 90 107 107 ASN ASN A . n A 1 91 SER 91 108 108 SER SER A . n A 1 92 ASN 92 109 109 ASN ASN A . n A 1 93 ARG 93 110 110 ARG ARG A . n A 1 94 LEU 94 111 111 LEU LEU A . n A 1 95 THR 95 112 112 THR THR A . n A 1 96 LYS 96 113 113 LYS LYS A . n A 1 97 ILE 97 114 114 ILE ILE A . n A 1 98 THR 98 115 115 THR THR A . n A 1 99 ASN 99 116 116 ASN ASN A . n A 1 100 ASP 100 117 117 ASP ASP A . n A 1 101 MET 101 118 118 MET MET A . n A 1 102 PHE 102 119 119 PHE PHE A . n A 1 103 SER 103 120 120 SER SER A . n A 1 104 GLY 104 121 121 GLY GLY A . n A 1 105 LEU 105 122 122 LEU LEU A . n A 1 106 SER 106 123 123 SER SER A . n A 1 107 ASN 107 124 124 ASN ASN A . n A 1 108 LEU 108 125 125 LEU LEU A . n A 1 109 HIS 109 126 126 HIS HIS A . n A 1 110 HIS 110 127 127 HIS HIS A . n A 1 111 LEU 111 128 128 LEU LEU A . n A 1 112 ILE 112 129 129 ILE ILE A . n A 1 113 LEU 113 130 130 LEU LEU A . n A 1 114 ASN 114 131 131 ASN ASN A . n A 1 115 ASN 115 132 132 ASN ASN A . n A 1 116 ASN 116 133 133 ASN ASN A . n A 1 117 GLN 117 134 134 GLN GLN A . n A 1 118 LEU 118 135 135 LEU LEU A . n A 1 119 THR 119 136 136 THR THR A . n A 1 120 LEU 120 137 137 LEU LEU A . n A 1 121 ILE 121 138 138 ILE ILE A . n A 1 122 SER 122 139 139 SER SER A . n A 1 123 SER 123 140 140 SER SER A . n A 1 124 THR 124 141 141 THR THR A . n A 1 125 ALA 125 142 142 ALA ALA A . n A 1 126 PHE 126 143 143 PHE PHE A . n A 1 127 ASP 127 144 144 ASP ASP A . n A 1 128 ASP 128 145 145 ASP ASP A . n A 1 129 VAL 129 146 146 VAL VAL A . n A 1 130 PHE 130 147 147 PHE PHE A . n A 1 131 ALA 131 148 148 ALA ALA A . n A 1 132 LEU 132 149 149 LEU LEU A . n A 1 133 GLU 133 150 150 GLU GLU A . n A 1 134 GLU 134 151 151 GLU GLU A . n A 1 135 LEU 135 152 152 LEU LEU A . n A 1 136 ASP 136 153 153 ASP ASP A . n A 1 137 LEU 137 154 154 LEU LEU A . n A 1 138 SER 138 155 155 SER SER A . n A 1 139 TYR 139 156 156 TYR TYR A . n A 1 140 ASN 140 157 157 ASN ASN A . n A 1 141 ASN 141 158 158 ASN ASN A . n A 1 142 LEU 142 159 159 LEU LEU A . n A 1 143 GLU 143 160 160 GLU GLU A . n A 1 144 THR 144 161 161 THR THR A . n A 1 145 ILE 145 162 162 ILE ILE A . n A 1 146 PRO 146 163 163 PRO PRO A . n A 1 147 TRP 147 164 164 TRP TRP A . n A 1 148 ASP 148 165 165 ASP ASP A . n A 1 149 ALA 149 166 166 ALA ALA A . n A 1 150 VAL 150 167 167 VAL VAL A . n A 1 151 GLU 151 168 168 GLU GLU A . n A 1 152 LYS 152 169 169 LYS LYS A . n A 1 153 MET 153 170 170 MET MET A . n A 1 154 VAL 154 171 171 VAL VAL A . n A 1 155 SER 155 172 172 SER SER A . n A 1 156 LEU 156 173 173 LEU LEU A . n A 1 157 HIS 157 174 174 HIS HIS A . n A 1 158 THR 158 175 175 THR THR A . n A 1 159 LEU 159 176 176 LEU LEU A . n A 1 160 SER 160 177 177 SER SER A . n A 1 161 LEU 161 178 178 LEU LEU A . n A 1 162 ASP 162 179 179 ASP ASP A . n A 1 163 HIS 163 180 180 HIS HIS A . n A 1 164 ASN 164 181 181 ASN ASN A . n A 1 165 MET 165 182 182 MET MET A . n A 1 166 ILE 166 183 183 ILE ILE A . n A 1 167 ASP 167 184 184 ASP ASP A . n A 1 168 ASN 168 185 185 ASN ASN A . n A 1 169 ILE 169 186 186 ILE ILE A . n A 1 170 PRO 170 187 187 PRO PRO A . n A 1 171 LYS 171 188 188 LYS LYS A . n A 1 172 GLY 172 189 189 GLY GLY A . n A 1 173 THR 173 190 190 THR THR A . n A 1 174 PHE 174 191 191 PHE PHE A . n A 1 175 SER 175 192 192 SER SER A . n A 1 176 HIS 176 193 193 HIS HIS A . n A 1 177 LEU 177 194 194 LEU LEU A . n A 1 178 HIS 178 195 195 HIS HIS A . n A 1 179 LYS 179 196 196 LYS LYS A . n A 1 180 MET 180 197 197 MET MET A . n A 1 181 THR 181 198 198 THR THR A . n A 1 182 ARG 182 199 199 ARG ARG A . n A 1 183 LEU 183 200 200 LEU LEU A . n A 1 184 ASP 184 201 201 ASP ASP A . n A 1 185 VAL 185 202 202 VAL VAL A . n A 1 186 THR 186 203 203 THR THR A . n A 1 187 SER 187 204 204 SER SER A . n A 1 188 ASN 188 205 205 ASN ASN A . n A 1 189 LYS 189 206 206 LYS LYS A . n A 1 190 LEU 190 207 207 LEU LEU A . n A 1 191 GLN 191 208 208 GLN GLN A . n A 1 192 LYS 192 209 209 LYS LYS A . n A 1 193 LEU 193 210 210 LEU LEU A . n A 1 194 PRO 194 211 211 PRO PRO A . n A 1 195 PRO 195 212 212 PRO PRO A . n A 1 196 ASP 196 213 213 ASP ASP A . n A 1 197 PRO 197 214 214 PRO PRO A . n A 1 198 LEU 198 215 215 LEU LEU A . n A 1 199 PHE 199 216 216 PHE PHE A . n A 1 200 GLN 200 217 217 GLN GLN A . n A 1 201 ARG 201 218 218 ARG ARG A . n A 1 202 ALA 202 219 219 ALA ALA A . n A 1 203 GLN 203 220 220 GLN GLN A . n A 1 204 VAL 204 221 221 VAL VAL A . n A 1 205 LEU 205 222 222 LEU LEU A . n A 1 206 ALA 206 223 223 ALA ALA A . n A 1 207 THR 207 224 ? ? ? A . n A 1 208 SER 208 225 ? ? ? A . n A 1 209 GLY 209 226 ? ? ? A . n A 1 210 ILE 210 227 227 ILE ILE A . n A 1 211 ILE 211 228 228 ILE ILE A . n A 1 212 SER 212 229 229 SER SER A . n A 1 213 PRO 213 230 230 PRO PRO A . n A 1 214 SER 214 231 231 SER SER A . n A 1 215 THR 215 232 232 THR THR A . n A 1 216 PHE 216 233 233 PHE PHE A . n A 1 217 ALA 217 234 234 ALA ALA A . n A 1 218 LEU 218 235 235 LEU LEU A . n A 1 219 SER 219 236 236 SER SER A . n A 1 220 PHE 220 237 237 PHE PHE A . n A 1 221 GLY 221 238 238 GLY GLY A . n A 1 222 GLY 222 239 239 GLY GLY A . n A 1 223 ASN 223 240 240 ASN ASN A . n A 1 224 PRO 224 241 241 PRO PRO A . n A 1 225 LEU 225 242 242 LEU LEU A . n A 1 226 HIS 226 243 243 HIS HIS A . n A 1 227 CYS 227 244 244 CYS CYS A . n A 1 228 ASN 228 245 245 ASN ASN A . n A 1 229 CYS 229 246 246 CYS CYS A . n A 1 230 GLU 230 247 247 GLU GLU A . n A 1 231 LEU 231 248 248 LEU LEU A . n A 1 232 LEU 232 249 249 LEU LEU A . n A 1 233 TRP 233 250 250 TRP TRP A . n A 1 234 LEU 234 251 251 LEU LEU A . n A 1 235 ARG 235 252 252 ARG ARG A . n A 1 236 ARG 236 253 253 ARG ARG A . n A 1 237 LEU 237 254 254 LEU LEU A . n A 1 238 SER 238 255 255 SER SER A . n A 1 239 ARG 239 256 256 ARG ARG A . n A 1 240 GLU 240 257 257 GLU GLU A . n A 1 241 ASP 241 258 258 ASP ASP A . n A 1 242 ASP 242 259 259 ASP ASP A . n A 1 243 LEU 243 260 260 LEU LEU A . n A 1 244 GLU 244 261 261 GLU GLU A . n A 1 245 THR 245 262 262 THR THR A . n A 1 246 CYS 246 263 263 CYS CYS A . n A 1 247 ALA 247 264 264 ALA ALA A . n A 1 248 SER 248 265 265 SER SER A . n A 1 249 PRO 249 266 266 PRO PRO A . n A 1 250 PRO 250 267 267 PRO PRO A . n A 1 251 LEU 251 268 268 LEU LEU A . n A 1 252 LEU 252 269 269 LEU LEU A . n A 1 253 THR 253 270 270 THR THR A . n A 1 254 GLY 254 271 271 GLY GLY A . n A 1 255 ARG 255 272 272 ARG ARG A . n A 1 256 TYR 256 273 273 TYR TYR A . n A 1 257 PHE 257 274 274 PHE PHE A . n A 1 258 TRP 258 275 275 TRP TRP A . n A 1 259 SER 259 276 276 SER SER A . n A 1 260 ILE 260 277 277 ILE ILE A . n A 1 261 PRO 261 278 278 PRO PRO A . n A 1 262 GLU 262 279 279 GLU GLU A . n A 1 263 GLU 263 280 280 GLU GLU A . n A 1 264 GLU 264 281 281 GLU GLU A . n A 1 265 PHE 265 282 282 PHE PHE A . n A 1 266 LEU 266 283 283 LEU LEU A . n A 1 267 CYS 267 284 284 CYS CYS A . n A 1 268 GLU 268 285 285 GLU GLU A . n A 1 269 PRO 269 286 286 PRO PRO A . n A 1 270 PRO 270 287 287 PRO PRO A . n A 1 271 LEU 271 288 288 LEU LEU A . n A 1 272 ILE 272 289 289 ILE ILE A . n A 1 273 THR 273 290 290 THR THR A . n A 1 274 ARG 274 291 291 ARG ARG A . n A 1 275 HIS 275 292 ? ? ? A . n A 1 276 THR 276 293 ? ? ? A . n A 1 277 HIS 277 294 ? ? ? A . n A 1 278 GLU 278 295 ? ? ? A . n A 1 279 MET 279 296 ? ? ? A . n A 1 280 ARG 280 297 ? ? ? A . n A 1 281 VAL 281 298 ? ? ? A . n A 1 282 LEU 282 299 ? ? ? A . n A 1 283 GLU 283 300 ? ? ? A . n A 1 284 GLY 284 301 ? ? ? A . n A 1 285 GLN 285 302 ? ? ? A . n A 1 286 ARG 286 303 ? ? ? A . n A 1 287 ALA 287 304 ? ? ? A . n A 1 288 THR 288 305 ? ? ? A . n A 1 289 LEU 289 306 ? ? ? A . n A 1 290 ARG 290 307 ? ? ? A . n A 1 291 CYS 291 308 ? ? ? A . n A 1 292 LYS 292 309 ? ? ? A . n A 1 293 ALA 293 310 ? ? ? A . n A 1 294 ARG 294 311 ? ? ? A . n A 1 295 GLY 295 312 ? ? ? A . n A 1 296 ASP 296 313 ? ? ? A . n A 1 297 PRO 297 314 ? ? ? A . n A 1 298 GLU 298 315 ? ? ? A . n A 1 299 PRO 299 316 ? ? ? A . n A 1 300 ALA 300 317 ? ? ? A . n A 1 301 ILE 301 318 ? ? ? A . n A 1 302 HIS 302 319 ? ? ? A . n A 1 303 TRP 303 320 ? ? ? A . n A 1 304 ILE 304 321 ? ? ? A . n A 1 305 SER 305 322 ? ? ? A . n A 1 306 PRO 306 323 ? ? ? A . n A 1 307 GLU 307 324 ? ? ? A . n A 1 308 GLY 308 325 ? ? ? A . n A 1 309 LYS 309 326 ? ? ? A . n A 1 310 LEU 310 327 ? ? ? A . n A 1 311 ILE 311 328 ? ? ? A . n A 1 312 SER 312 329 ? ? ? A . n A 1 313 ASN 313 330 ? ? ? A . n A 1 314 ALA 314 331 ? ? ? A . n A 1 315 THR 315 332 ? ? ? A . n A 1 316 ARG 316 333 ? ? ? A . n A 1 317 SER 317 334 ? ? ? A . n A 1 318 LEU 318 335 ? ? ? A . n A 1 319 VAL 319 336 ? ? ? A . n A 1 320 TYR 320 337 ? ? ? A . n A 1 321 ASP 321 338 ? ? ? A . n A 1 322 ASN 322 339 ? ? ? A . n A 1 323 GLY 323 340 ? ? ? A . n A 1 324 THR 324 341 ? ? ? A . n A 1 325 LEU 325 342 ? ? ? A . n A 1 326 ASP 326 343 ? ? ? A . n A 1 327 ILE 327 344 ? ? ? A . n A 1 328 LEU 328 345 ? ? ? A . n A 1 329 ILE 329 346 ? ? ? A . n A 1 330 THR 330 347 ? ? ? A . n A 1 331 THR 331 348 ? ? ? A . n A 1 332 VAL 332 349 ? ? ? A . n A 1 333 LYS 333 350 ? ? ? A . n A 1 334 ASP 334 351 ? ? ? A . n A 1 335 THR 335 352 ? ? ? A . n A 1 336 GLY 336 353 ? ? ? A . n A 1 337 ALA 337 354 ? ? ? A . n A 1 338 PHE 338 355 ? ? ? A . n A 1 339 THR 339 356 ? ? ? A . n A 1 340 CYS 340 357 ? ? ? A . n A 1 341 ILE 341 358 ? ? ? A . n A 1 342 ALA 342 359 ? ? ? A . n A 1 343 SER 343 360 ? ? ? A . n A 1 344 ASN 344 361 ? ? ? A . n A 1 345 PRO 345 362 ? ? ? A . n A 1 346 ALA 346 363 ? ? ? A . n A 1 347 GLY 347 364 ? ? ? A . n A 1 348 GLU 348 365 ? ? ? A . n A 1 349 ALA 349 366 ? ? ? A . n A 1 350 THR 350 367 ? ? ? A . n A 1 351 GLN 351 368 ? ? ? A . n A 1 352 ILE 352 369 ? ? ? A . n A 1 353 VAL 353 370 ? ? ? A . n A 1 354 ASP 354 371 ? ? ? A . n A 1 355 LEU 355 372 ? ? ? A . n A 1 356 HIS 356 373 ? ? ? A . n A 1 357 ILE 357 374 ? ? ? A . n A 1 358 ILE 358 375 ? ? ? A . n A 1 359 LYS 359 376 ? ? ? A . n A 1 360 LEU 360 377 ? ? ? A . n A 1 361 PRO 361 378 ? ? ? A . n A 1 362 HIS 362 379 ? ? ? A . n A 1 363 HIS 363 380 ? ? ? A . n A 1 364 HIS 364 381 ? ? ? A . n A 1 365 HIS 365 382 ? ? ? A . n A 1 366 HIS 366 383 ? ? ? A . n A 1 367 HIS 367 384 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B 1 2 A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 12_554 x,x-y,-z-1/2 0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -45.6310000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-06-06 2 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' chem_comp 3 2 'Structure model' entity 4 2 'Structure model' pdbx_branch_scheme 5 2 'Structure model' pdbx_chem_comp_identifier 6 2 'Structure model' pdbx_entity_branch 7 2 'Structure model' pdbx_entity_branch_descriptor 8 2 'Structure model' pdbx_entity_branch_link 9 2 'Structure model' pdbx_entity_branch_list 10 2 'Structure model' pdbx_entity_nonpoly 11 2 'Structure model' pdbx_nonpoly_scheme 12 2 'Structure model' pdbx_struct_assembly_gen 13 2 'Structure model' struct_asym 14 2 'Structure model' struct_conn 15 2 'Structure model' struct_site 16 2 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.auth_asym_id' 2 2 'Structure model' '_atom_site.auth_seq_id' 3 2 'Structure model' '_atom_site.label_asym_id' 4 2 'Structure model' '_chem_comp.name' 5 2 'Structure model' '_chem_comp.type' 6 2 'Structure model' '_entity.formula_weight' 7 2 'Structure model' '_entity.pdbx_description' 8 2 'Structure model' '_entity.pdbx_number_of_molecules' 9 2 'Structure model' '_entity.type' 10 2 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 11 2 'Structure model' '_struct_conn.pdbx_role' 12 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 13 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 14 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 15 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 16 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 CB _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 CYS _pdbx_validate_close_contact.auth_seq_id_1 20 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 SG _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 CYS _pdbx_validate_close_contact.auth_seq_id_2 26 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.68 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 25 ? ? -111.84 74.59 2 1 ASN A 48 ? ? -97.47 34.05 3 1 ASN A 61 ? ? -123.80 -151.97 4 1 ASN A 73 ? ? 70.57 -7.31 5 1 ASN A 109 ? ? -131.03 -153.14 6 1 PHE A 119 ? ? -113.36 62.19 7 1 GLN A 134 ? ? -99.22 50.76 8 1 PRO A 163 ? ? -66.00 85.08 9 1 ASN A 181 ? ? -123.95 -154.26 10 1 LYS A 206 ? ? -98.57 48.84 11 1 CYS A 244 ? ? -68.85 77.60 12 1 ASN A 245 ? ? -115.39 -167.13 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 18 ? A GLN 1 2 1 Y 1 A THR 224 ? A THR 207 3 1 Y 1 A SER 225 ? A SER 208 4 1 Y 1 A GLY 226 ? A GLY 209 5 1 Y 1 A HIS 292 ? A HIS 275 6 1 Y 1 A THR 293 ? A THR 276 7 1 Y 1 A HIS 294 ? A HIS 277 8 1 Y 1 A GLU 295 ? A GLU 278 9 1 Y 1 A MET 296 ? A MET 279 10 1 Y 1 A ARG 297 ? A ARG 280 11 1 Y 1 A VAL 298 ? A VAL 281 12 1 Y 1 A LEU 299 ? A LEU 282 13 1 Y 1 A GLU 300 ? A GLU 283 14 1 Y 1 A GLY 301 ? A GLY 284 15 1 Y 1 A GLN 302 ? A GLN 285 16 1 Y 1 A ARG 303 ? A ARG 286 17 1 Y 1 A ALA 304 ? A ALA 287 18 1 Y 1 A THR 305 ? A THR 288 19 1 Y 1 A LEU 306 ? A LEU 289 20 1 Y 1 A ARG 307 ? A ARG 290 21 1 Y 1 A CYS 308 ? A CYS 291 22 1 Y 1 A LYS 309 ? A LYS 292 23 1 Y 1 A ALA 310 ? A ALA 293 24 1 Y 1 A ARG 311 ? A ARG 294 25 1 Y 1 A GLY 312 ? A GLY 295 26 1 Y 1 A ASP 313 ? A ASP 296 27 1 Y 1 A PRO 314 ? A PRO 297 28 1 Y 1 A GLU 315 ? A GLU 298 29 1 Y 1 A PRO 316 ? A PRO 299 30 1 Y 1 A ALA 317 ? A ALA 300 31 1 Y 1 A ILE 318 ? A ILE 301 32 1 Y 1 A HIS 319 ? A HIS 302 33 1 Y 1 A TRP 320 ? A TRP 303 34 1 Y 1 A ILE 321 ? A ILE 304 35 1 Y 1 A SER 322 ? A SER 305 36 1 Y 1 A PRO 323 ? A PRO 306 37 1 Y 1 A GLU 324 ? A GLU 307 38 1 Y 1 A GLY 325 ? A GLY 308 39 1 Y 1 A LYS 326 ? A LYS 309 40 1 Y 1 A LEU 327 ? A LEU 310 41 1 Y 1 A ILE 328 ? A ILE 311 42 1 Y 1 A SER 329 ? A SER 312 43 1 Y 1 A ASN 330 ? A ASN 313 44 1 Y 1 A ALA 331 ? A ALA 314 45 1 Y 1 A THR 332 ? A THR 315 46 1 Y 1 A ARG 333 ? A ARG 316 47 1 Y 1 A SER 334 ? A SER 317 48 1 Y 1 A LEU 335 ? A LEU 318 49 1 Y 1 A VAL 336 ? A VAL 319 50 1 Y 1 A TYR 337 ? A TYR 320 51 1 Y 1 A ASP 338 ? A ASP 321 52 1 Y 1 A ASN 339 ? A ASN 322 53 1 Y 1 A GLY 340 ? A GLY 323 54 1 Y 1 A THR 341 ? A THR 324 55 1 Y 1 A LEU 342 ? A LEU 325 56 1 Y 1 A ASP 343 ? A ASP 326 57 1 Y 1 A ILE 344 ? A ILE 327 58 1 Y 1 A LEU 345 ? A LEU 328 59 1 Y 1 A ILE 346 ? A ILE 329 60 1 Y 1 A THR 347 ? A THR 330 61 1 Y 1 A THR 348 ? A THR 331 62 1 Y 1 A VAL 349 ? A VAL 332 63 1 Y 1 A LYS 350 ? A LYS 333 64 1 Y 1 A ASP 351 ? A ASP 334 65 1 Y 1 A THR 352 ? A THR 335 66 1 Y 1 A GLY 353 ? A GLY 336 67 1 Y 1 A ALA 354 ? A ALA 337 68 1 Y 1 A PHE 355 ? A PHE 338 69 1 Y 1 A THR 356 ? A THR 339 70 1 Y 1 A CYS 357 ? A CYS 340 71 1 Y 1 A ILE 358 ? A ILE 341 72 1 Y 1 A ALA 359 ? A ALA 342 73 1 Y 1 A SER 360 ? A SER 343 74 1 Y 1 A ASN 361 ? A ASN 344 75 1 Y 1 A PRO 362 ? A PRO 345 76 1 Y 1 A ALA 363 ? A ALA 346 77 1 Y 1 A GLY 364 ? A GLY 347 78 1 Y 1 A GLU 365 ? A GLU 348 79 1 Y 1 A ALA 366 ? A ALA 349 80 1 Y 1 A THR 367 ? A THR 350 81 1 Y 1 A GLN 368 ? A GLN 351 82 1 Y 1 A ILE 369 ? A ILE 352 83 1 Y 1 A VAL 370 ? A VAL 353 84 1 Y 1 A ASP 371 ? A ASP 354 85 1 Y 1 A LEU 372 ? A LEU 355 86 1 Y 1 A HIS 373 ? A HIS 356 87 1 Y 1 A ILE 374 ? A ILE 357 88 1 Y 1 A ILE 375 ? A ILE 358 89 1 Y 1 A LYS 376 ? A LYS 359 90 1 Y 1 A LEU 377 ? A LEU 360 91 1 Y 1 A PRO 378 ? A PRO 361 92 1 Y 1 A HIS 379 ? A HIS 362 93 1 Y 1 A HIS 380 ? A HIS 363 94 1 Y 1 A HIS 381 ? A HIS 364 95 1 Y 1 A HIS 382 ? A HIS 365 96 1 Y 1 A HIS 383 ? A HIS 366 97 1 Y 1 A HIS 384 ? A HIS 367 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'JST CREST' Japan ? 1 MEXT/JSPS Japan 22121003 2 MEXT/JSPS Japan 16H04749 3 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 601 n B 2 NAG 2 B NAG 2 A NAG 602 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'assay for oligomerization' _pdbx_struct_assembly_auth_evidence.details ? #