data_5Y10 # _entry.id 5Y10 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5Y10 WWPDB D_1300004485 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5Y10 _pdbx_database_status.recvd_initial_deposition_date 2017-07-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Wu, Y.' 1 ? 'Gao, F.' 2 ? 'Qi, J.X.' 3 ? 'Chai, Y.' 4 ? 'Gao, G.F.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Proc. Natl. Acad. Sci. U.S.A.' _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 114 _citation.language ? _citation.page_first E7564 _citation.page_last E7573 _citation.title 'Structures of phlebovirus glycoprotein Gn and identification of a neutralizing antibody epitope' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.1705176114 _citation.pdbx_database_id_PubMed 28827346 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wu, Y.' 1 ? primary 'Zhu, Y.H.' 2 ? primary 'Gao, F.' 3 ? primary 'Jiao, Y.J.' 4 ? primary 'Oladejo, B.O.' 5 ? primary 'Chai, Y.' 6 ? primary 'Bi, Y.H.' 7 ? primary 'Lu, S.' 8 ? primary 'Dong, M.Q.' 9 ? primary 'Zhang, C.' 10 ? primary 'Huang, G.M.' 11 ? primary 'Wong, G.' 12 ? primary 'Li, N.' 13 ? primary 'Zhang, Y.F.' 14 ? primary 'Li, Y.' 15 ? primary 'Feng, W.H.' 16 ? primary 'Shi, Y.' 17 ? primary 'Liang, M.F.' 18 ? primary 'Zhang, R.G.' 19 ? primary 'Qi, J.X.' 20 ? primary 'Gao, G.F.' 21 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5Y10 _cell.details ? _cell.formula_units_Z ? _cell.length_a 87.410 _cell.length_a_esd ? _cell.length_b 87.410 _cell.length_b_esd ? _cell.length_c 91.003 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Y10 _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Membrane glycoprotein polyprotein' 35367.039 1 ? ? 'UNP residues 20-340' ? 2 branched man 'alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 586.542 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DSGPIICAGPIHSNKSADIPHLLGYSEKICQIDRLIHVSSWLRNHSQFQGYVGQRGGRSQVSYYPAENSYSRWSGLLSPC DADWLGMLVVKKAKGSDMIVPGPSYKGKVFFERPTFDGYVGWGCGSGKSRTESGELCSSDSGTSSGLLPSDRVLWIGDVA CQPMTPIPEETFLELKSFSQSEFPDICKIDGIVFNQCEGESLPQPFDVAWMDVGHSHKIIMREHKTKWVQESSSKDFVCY KEGTGPCSESEEKTCKTSGSCRGDMQFCKVAGCEHGEEASEAKCRCSLVHKPGEVVVSYGGMRVRPKCYGFSRMMATLEV N ; _entity_poly.pdbx_seq_one_letter_code_can ;DSGPIICAGPIHSNKSADIPHLLGYSEKICQIDRLIHVSSWLRNHSQFQGYVGQRGGRSQVSYYPAENSYSRWSGLLSPC DADWLGMLVVKKAKGSDMIVPGPSYKGKVFFERPTFDGYVGWGCGSGKSRTESGELCSSDSGTSSGLLPSDRVLWIGDVA CQPMTPIPEETFLELKSFSQSEFPDICKIDGIVFNQCEGESLPQPFDVAWMDVGHSHKIIMREHKTKWVQESSSKDFVCY KEGTGPCSESEEKTCKTSGSCRGDMQFCKVAGCEHGEEASEAKCRCSLVHKPGEVVVSYGGMRVRPKCYGFSRMMATLEV N ; _entity_poly.pdbx_strand_id C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 SER n 1 3 GLY n 1 4 PRO n 1 5 ILE n 1 6 ILE n 1 7 CYS n 1 8 ALA n 1 9 GLY n 1 10 PRO n 1 11 ILE n 1 12 HIS n 1 13 SER n 1 14 ASN n 1 15 LYS n 1 16 SER n 1 17 ALA n 1 18 ASP n 1 19 ILE n 1 20 PRO n 1 21 HIS n 1 22 LEU n 1 23 LEU n 1 24 GLY n 1 25 TYR n 1 26 SER n 1 27 GLU n 1 28 LYS n 1 29 ILE n 1 30 CYS n 1 31 GLN n 1 32 ILE n 1 33 ASP n 1 34 ARG n 1 35 LEU n 1 36 ILE n 1 37 HIS n 1 38 VAL n 1 39 SER n 1 40 SER n 1 41 TRP n 1 42 LEU n 1 43 ARG n 1 44 ASN n 1 45 HIS n 1 46 SER n 1 47 GLN n 1 48 PHE n 1 49 GLN n 1 50 GLY n 1 51 TYR n 1 52 VAL n 1 53 GLY n 1 54 GLN n 1 55 ARG n 1 56 GLY n 1 57 GLY n 1 58 ARG n 1 59 SER n 1 60 GLN n 1 61 VAL n 1 62 SER n 1 63 TYR n 1 64 TYR n 1 65 PRO n 1 66 ALA n 1 67 GLU n 1 68 ASN n 1 69 SER n 1 70 TYR n 1 71 SER n 1 72 ARG n 1 73 TRP n 1 74 SER n 1 75 GLY n 1 76 LEU n 1 77 LEU n 1 78 SER n 1 79 PRO n 1 80 CYS n 1 81 ASP n 1 82 ALA n 1 83 ASP n 1 84 TRP n 1 85 LEU n 1 86 GLY n 1 87 MET n 1 88 LEU n 1 89 VAL n 1 90 VAL n 1 91 LYS n 1 92 LYS n 1 93 ALA n 1 94 LYS n 1 95 GLY n 1 96 SER n 1 97 ASP n 1 98 MET n 1 99 ILE n 1 100 VAL n 1 101 PRO n 1 102 GLY n 1 103 PRO n 1 104 SER n 1 105 TYR n 1 106 LYS n 1 107 GLY n 1 108 LYS n 1 109 VAL n 1 110 PHE n 1 111 PHE n 1 112 GLU n 1 113 ARG n 1 114 PRO n 1 115 THR n 1 116 PHE n 1 117 ASP n 1 118 GLY n 1 119 TYR n 1 120 VAL n 1 121 GLY n 1 122 TRP n 1 123 GLY n 1 124 CYS n 1 125 GLY n 1 126 SER n 1 127 GLY n 1 128 LYS n 1 129 SER n 1 130 ARG n 1 131 THR n 1 132 GLU n 1 133 SER n 1 134 GLY n 1 135 GLU n 1 136 LEU n 1 137 CYS n 1 138 SER n 1 139 SER n 1 140 ASP n 1 141 SER n 1 142 GLY n 1 143 THR n 1 144 SER n 1 145 SER n 1 146 GLY n 1 147 LEU n 1 148 LEU n 1 149 PRO n 1 150 SER n 1 151 ASP n 1 152 ARG n 1 153 VAL n 1 154 LEU n 1 155 TRP n 1 156 ILE n 1 157 GLY n 1 158 ASP n 1 159 VAL n 1 160 ALA n 1 161 CYS n 1 162 GLN n 1 163 PRO n 1 164 MET n 1 165 THR n 1 166 PRO n 1 167 ILE n 1 168 PRO n 1 169 GLU n 1 170 GLU n 1 171 THR n 1 172 PHE n 1 173 LEU n 1 174 GLU n 1 175 LEU n 1 176 LYS n 1 177 SER n 1 178 PHE n 1 179 SER n 1 180 GLN n 1 181 SER n 1 182 GLU n 1 183 PHE n 1 184 PRO n 1 185 ASP n 1 186 ILE n 1 187 CYS n 1 188 LYS n 1 189 ILE n 1 190 ASP n 1 191 GLY n 1 192 ILE n 1 193 VAL n 1 194 PHE n 1 195 ASN n 1 196 GLN n 1 197 CYS n 1 198 GLU n 1 199 GLY n 1 200 GLU n 1 201 SER n 1 202 LEU n 1 203 PRO n 1 204 GLN n 1 205 PRO n 1 206 PHE n 1 207 ASP n 1 208 VAL n 1 209 ALA n 1 210 TRP n 1 211 MET n 1 212 ASP n 1 213 VAL n 1 214 GLY n 1 215 HIS n 1 216 SER n 1 217 HIS n 1 218 LYS n 1 219 ILE n 1 220 ILE n 1 221 MET n 1 222 ARG n 1 223 GLU n 1 224 HIS n 1 225 LYS n 1 226 THR n 1 227 LYS n 1 228 TRP n 1 229 VAL n 1 230 GLN n 1 231 GLU n 1 232 SER n 1 233 SER n 1 234 SER n 1 235 LYS n 1 236 ASP n 1 237 PHE n 1 238 VAL n 1 239 CYS n 1 240 TYR n 1 241 LYS n 1 242 GLU n 1 243 GLY n 1 244 THR n 1 245 GLY n 1 246 PRO n 1 247 CYS n 1 248 SER n 1 249 GLU n 1 250 SER n 1 251 GLU n 1 252 GLU n 1 253 LYS n 1 254 THR n 1 255 CYS n 1 256 LYS n 1 257 THR n 1 258 SER n 1 259 GLY n 1 260 SER n 1 261 CYS n 1 262 ARG n 1 263 GLY n 1 264 ASP n 1 265 MET n 1 266 GLN n 1 267 PHE n 1 268 CYS n 1 269 LYS n 1 270 VAL n 1 271 ALA n 1 272 GLY n 1 273 CYS n 1 274 GLU n 1 275 HIS n 1 276 GLY n 1 277 GLU n 1 278 GLU n 1 279 ALA n 1 280 SER n 1 281 GLU n 1 282 ALA n 1 283 LYS n 1 284 CYS n 1 285 ARG n 1 286 CYS n 1 287 SER n 1 288 LEU n 1 289 VAL n 1 290 HIS n 1 291 LYS n 1 292 PRO n 1 293 GLY n 1 294 GLU n 1 295 VAL n 1 296 VAL n 1 297 VAL n 1 298 SER n 1 299 TYR n 1 300 GLY n 1 301 GLY n 1 302 MET n 1 303 ARG n 1 304 VAL n 1 305 ARG n 1 306 PRO n 1 307 LYS n 1 308 CYS n 1 309 TYR n 1 310 GLY n 1 311 PHE n 1 312 SER n 1 313 ARG n 1 314 MET n 1 315 MET n 1 316 ALA n 1 317 THR n 1 318 LEU n 1 319 GLU n 1 320 VAL n 1 321 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 321 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Severe fever with thrombocytopenia virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1003835 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Baculovirus expression vector pFastBac1-HM' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 274590 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A1L2DAC8_9VIRU _struct_ref.pdbx_db_accession A0A1L2DAC8 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DSGPIICAGPIHSNKSADIPHLLGYSEKICQIDRLIHVSSWLRNHSQFQGYVGQRGGRSQVSYYPAENSYSRWSGLLSPC DADWLGMLVVKKAKGSDMIVPGPSYKGKVFFERPTFDGYVGWGCGSGKSRTESGELCSSDSGTSSGLLPSDRVLWIGDVA CQPMTPIPEETFLELKSFSQSEFPDICKIDGIVFNQCEGESLPQPFDVAWMDVGHSHKIIMREHKTKWVQESSSKDFVCY KEGTGPCSESEEKTCKTSGSCRGDMQFCKVAGCEHGEEASEAKCRCSLVHKPGEVVVSYGGMRVRPKCYGFSRMMATLEV N ; _struct_ref.pdbx_align_begin 20 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5Y10 _struct_ref_seq.pdbx_strand_id C _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 321 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A1L2DAC8 _struct_ref_seq.db_align_beg 20 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 340 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 20 _struct_ref_seq.pdbx_auth_seq_align_end 340 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose ? 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5Y10 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.46 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 49.95 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20% (w/v) PEG 4000, 20% (v/v) 2-propanol, 0.1M sodium citrate pH 5.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-07-01 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97853 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL17U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97853 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL17U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5Y10 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.6 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 10777 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 15.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.6 _reflns_shell.d_res_low 2.69 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1108 _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.848 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5Y10 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.6 _refine.ls_d_res_low 36.643 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10773 _refine.ls_number_reflns_R_free 504 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 92.30 _refine.ls_percent_reflns_R_free 4.68 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2237 _refine.ls_R_factor_R_free 0.2851 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2206 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.40 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 38.70 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.46 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2450 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 39 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2489 _refine_hist.d_res_high 2.6 _refine_hist.d_res_low 36.643 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 ? 2562 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.528 ? 3465 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 8.262 ? 1524 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.064 ? 364 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 ? 443 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.5174 2.7706 . . 113 2305 83.00 . . . 0.3925 . 0.3057 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7706 3.1713 . . 116 2785 100.00 . . . 0.3801 . 0.2769 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1713 3.9948 . . 155 2731 99.00 . . . 0.2499 . 0.2274 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.9948 36.6468 . . 120 2448 87.00 . . . 0.2823 . 0.1966 . . . . . . . . . . # _struct.entry_id 5Y10 _struct.title 'SFTSV Gn head domain' _struct.pdbx_descriptor 'Membrane glycoprotein polyprotein' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5Y10 _struct_keywords.text 'SFTSV, GN, Phlebovirus, bunyavirus, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 24 ? ARG A 34 ? GLY C 43 ARG C 53 1 ? 11 HELX_P HELX_P2 AA2 LEU A 35 ? GLN A 47 ? LEU C 54 GLN C 66 1 ? 13 HELX_P HELX_P3 AA3 GLY A 57 ? VAL A 61 ? GLY C 76 VAL C 80 5 ? 5 HELX_P HELX_P4 AA4 SER A 69 ? TRP A 73 ? SER C 88 TRP C 92 5 ? 5 HELX_P HELX_P5 AA5 SER A 78 ? LEU A 85 ? SER C 97 LEU C 104 1 ? 8 HELX_P HELX_P6 AA6 SER A 141 ? SER A 144 ? SER C 160 SER C 163 5 ? 4 HELX_P HELX_P7 AA7 PRO A 168 ? PHE A 183 ? PRO C 187 PHE C 202 1 ? 16 HELX_P HELX_P8 AA8 SER A 233 ? LYS A 235 ? SER C 252 LYS C 254 5 ? 3 HELX_P HELX_P9 AA9 SER A 248 ? SER A 258 ? SER C 267 SER C 277 1 ? 11 HELX_P HELX_P10 AB1 ASP A 264 ? GLY A 272 ? ASP C 283 GLY C 291 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 7 SG ? ? ? 1_555 A CYS 30 SG ? ? C CYS 26 C CYS 49 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf2 disulf ? ? A CYS 124 SG ? ? ? 1_555 A CYS 137 SG ? ? C CYS 143 C CYS 156 1_555 ? ? ? ? ? ? ? 2.048 ? ? disulf3 disulf ? ? A CYS 161 SG ? ? ? 1_555 A CYS 308 SG ? ? C CYS 180 C CYS 327 1_555 ? ? ? ? ? ? ? 2.080 ? ? disulf4 disulf ? ? A CYS 187 SG ? ? ? 1_555 A CYS 197 SG ? ? C CYS 206 C CYS 216 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf5 disulf ? ? A CYS 239 SG ? ? ? 1_555 A CYS 286 SG ? ? C CYS 258 C CYS 305 1_555 ? ? ? ? ? ? ? 2.048 ? ? disulf6 disulf ? ? A CYS 247 SG ? ? ? 1_555 A CYS 284 SG ? ? C CYS 266 C CYS 303 1_555 ? ? ? ? ? ? ? 2.086 ? ? disulf7 disulf ? ? A CYS 255 SG ? ? ? 1_555 A CYS 261 SG ? ? C CYS 274 C CYS 280 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf8 disulf ? ? A CYS 268 SG ? ? ? 1_555 A CYS 273 SG ? ? C CYS 287 C CYS 292 1_555 ? ? ? ? ? ? ? 2.078 ? ? covale1 covale one ? A ASN 44 ND2 ? ? ? 1_555 B NAG . C1 ? ? C ASN 63 A NAG 1 1_555 ? ? ? ? ? ? ? 1.777 sing N-Glycosylation covale2 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? A NAG 1 A NAG 2 1_555 ? ? ? ? ? ? ? 1.412 ? ? covale3 covale both ? B NAG . O4 ? ? ? 1_555 B MAN . C1 ? ? A NAG 2 A MAN 3 1_555 ? ? ? ? ? ? ? 1.460 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TYR _struct_mon_prot_cis.label_seq_id 64 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TYR _struct_mon_prot_cis.auth_seq_id 83 _struct_mon_prot_cis.auth_asym_id C _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 65 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 84 _struct_mon_prot_cis.pdbx_auth_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.95 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 5 ? AA3 ? 2 ? AA4 ? 4 ? AA5 ? 4 ? AA6 ? 3 ? AA7 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel AA2 4 5 ? parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 51 ? GLN A 54 ? TYR C 70 GLN C 73 AA1 2 LEU A 147 ? PRO A 149 ? LEU C 166 PRO C 168 AA2 1 SER A 62 ? TYR A 64 ? SER C 81 TYR C 83 AA2 2 VAL A 153 ? ILE A 156 ? VAL C 172 ILE C 175 AA2 3 PHE A 110 ? PRO A 114 ? PHE C 129 PRO C 133 AA2 4 TYR A 119 ? GLY A 123 ? TYR C 138 GLY C 142 AA2 5 VAL A 90 ? LYS A 92 ? VAL C 109 LYS C 111 AA3 1 LYS A 128 ? ARG A 130 ? LYS C 147 ARG C 149 AA3 2 CYS A 137 ? SER A 139 ? CYS C 156 SER C 158 AA4 1 ASP A 158 ? CYS A 161 ? ASP C 177 CYS C 180 AA4 2 CYS A 308 ? LEU A 318 ? CYS C 327 LEU C 337 AA4 3 ILE A 186 ? ILE A 189 ? ILE C 205 ILE C 208 AA4 4 ILE A 192 ? VAL A 193 ? ILE C 211 VAL C 212 AA5 1 ASP A 158 ? CYS A 161 ? ASP C 177 CYS C 180 AA5 2 CYS A 308 ? LEU A 318 ? CYS C 327 LEU C 337 AA5 3 GLN A 204 ? ASP A 212 ? GLN C 223 ASP C 231 AA5 4 LYS A 218 ? MET A 221 ? LYS C 237 MET C 240 AA6 1 LYS A 225 ? VAL A 229 ? LYS C 244 VAL C 248 AA6 2 GLU A 294 ? TYR A 299 ? GLU C 313 TYR C 318 AA6 3 MET A 302 ? VAL A 304 ? MET C 321 VAL C 323 AA7 1 GLY A 245 ? PRO A 246 ? GLY C 264 PRO C 265 AA7 2 PHE A 237 ? LYS A 241 ? PHE C 256 LYS C 260 AA7 3 CYS A 284 ? LEU A 288 ? CYS C 303 LEU C 307 AA7 4 ARG A 262 ? GLY A 263 ? ARG C 281 GLY C 282 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLN A 54 ? N GLN C 73 O LEU A 148 ? O LEU C 167 AA2 1 2 N SER A 62 ? N SER C 81 O TRP A 155 ? O TRP C 174 AA2 2 3 O LEU A 154 ? O LEU C 173 N PHE A 110 ? N PHE C 129 AA2 3 4 N ARG A 113 ? N ARG C 132 O VAL A 120 ? O VAL C 139 AA2 4 5 O TYR A 119 ? O TYR C 138 N LYS A 91 ? N LYS C 110 AA3 1 2 N SER A 129 ? N SER C 148 O SER A 138 ? O SER C 157 AA4 1 2 N ALA A 160 ? N ALA C 179 O TYR A 309 ? O TYR C 328 AA4 2 3 O THR A 317 ? O THR C 336 N LYS A 188 ? N LYS C 207 AA4 3 4 N ILE A 189 ? N ILE C 208 O ILE A 192 ? O ILE C 211 AA5 1 2 N ALA A 160 ? N ALA C 179 O TYR A 309 ? O TYR C 328 AA5 2 3 O ALA A 316 ? O ALA C 335 N GLN A 204 ? N GLN C 223 AA5 3 4 N MET A 211 ? N MET C 230 O ILE A 219 ? O ILE C 238 AA6 1 2 N LYS A 225 ? N LYS C 244 O SER A 298 ? O SER C 317 AA6 2 3 N VAL A 297 ? N VAL C 316 O VAL A 304 ? O VAL C 323 AA7 1 2 O GLY A 245 ? O GLY C 264 N LYS A 241 ? N LYS C 260 AA7 2 3 N VAL A 238 ? N VAL C 257 O SER A 287 ? O SER C 306 AA7 3 4 O CYS A 284 ? O CYS C 303 N ARG A 262 ? N ARG C 281 # _atom_sites.entry_id 5Y10 _atom_sites.fract_transf_matrix[1][1] 0.011440 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011440 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010989 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 20 ? ? ? C . n A 1 2 SER 2 21 ? ? ? C . n A 1 3 GLY 3 22 ? ? ? C . n A 1 4 PRO 4 23 23 PRO PRO C . n A 1 5 ILE 5 24 24 ILE ILE C . n A 1 6 ILE 6 25 25 ILE ILE C . n A 1 7 CYS 7 26 26 CYS CYS C . n A 1 8 ALA 8 27 27 ALA ALA C . n A 1 9 GLY 9 28 28 GLY GLY C . n A 1 10 PRO 10 29 29 PRO PRO C . n A 1 11 ILE 11 30 30 ILE ILE C . n A 1 12 HIS 12 31 31 HIS HIS C . n A 1 13 SER 13 32 32 SER SER C . n A 1 14 ASN 14 33 33 ASN ASN C . n A 1 15 LYS 15 34 34 LYS LYS C . n A 1 16 SER 16 35 35 SER SER C . n A 1 17 ALA 17 36 36 ALA ALA C . n A 1 18 ASP 18 37 37 ASP ASP C . n A 1 19 ILE 19 38 38 ILE ILE C . n A 1 20 PRO 20 39 39 PRO PRO C . n A 1 21 HIS 21 40 40 HIS HIS C . n A 1 22 LEU 22 41 41 LEU LEU C . n A 1 23 LEU 23 42 42 LEU LEU C . n A 1 24 GLY 24 43 43 GLY GLY C . n A 1 25 TYR 25 44 44 TYR TYR C . n A 1 26 SER 26 45 45 SER SER C . n A 1 27 GLU 27 46 46 GLU GLU C . n A 1 28 LYS 28 47 47 LYS LYS C . n A 1 29 ILE 29 48 48 ILE ILE C . n A 1 30 CYS 30 49 49 CYS CYS C . n A 1 31 GLN 31 50 50 GLN GLN C . n A 1 32 ILE 32 51 51 ILE ILE C . n A 1 33 ASP 33 52 52 ASP ASP C . n A 1 34 ARG 34 53 53 ARG ARG C . n A 1 35 LEU 35 54 54 LEU LEU C . n A 1 36 ILE 36 55 55 ILE ILE C . n A 1 37 HIS 37 56 56 HIS HIS C . n A 1 38 VAL 38 57 57 VAL VAL C . n A 1 39 SER 39 58 58 SER SER C . n A 1 40 SER 40 59 59 SER SER C . n A 1 41 TRP 41 60 60 TRP TRP C . n A 1 42 LEU 42 61 61 LEU LEU C . n A 1 43 ARG 43 62 62 ARG ARG C . n A 1 44 ASN 44 63 63 ASN ASN C . n A 1 45 HIS 45 64 64 HIS HIS C . n A 1 46 SER 46 65 65 SER SER C . n A 1 47 GLN 47 66 66 GLN GLN C . n A 1 48 PHE 48 67 67 PHE PHE C . n A 1 49 GLN 49 68 68 GLN GLN C . n A 1 50 GLY 50 69 69 GLY GLY C . n A 1 51 TYR 51 70 70 TYR TYR C . n A 1 52 VAL 52 71 71 VAL VAL C . n A 1 53 GLY 53 72 72 GLY GLY C . n A 1 54 GLN 54 73 73 GLN GLN C . n A 1 55 ARG 55 74 74 ARG ARG C . n A 1 56 GLY 56 75 75 GLY GLY C . n A 1 57 GLY 57 76 76 GLY GLY C . n A 1 58 ARG 58 77 77 ARG ARG C . n A 1 59 SER 59 78 78 SER SER C . n A 1 60 GLN 60 79 79 GLN GLN C . n A 1 61 VAL 61 80 80 VAL VAL C . n A 1 62 SER 62 81 81 SER SER C . n A 1 63 TYR 63 82 82 TYR TYR C . n A 1 64 TYR 64 83 83 TYR TYR C . n A 1 65 PRO 65 84 84 PRO PRO C . n A 1 66 ALA 66 85 85 ALA ALA C . n A 1 67 GLU 67 86 86 GLU GLU C . n A 1 68 ASN 68 87 87 ASN ASN C . n A 1 69 SER 69 88 88 SER SER C . n A 1 70 TYR 70 89 89 TYR TYR C . n A 1 71 SER 71 90 90 SER SER C . n A 1 72 ARG 72 91 91 ARG ARG C . n A 1 73 TRP 73 92 92 TRP TRP C . n A 1 74 SER 74 93 93 SER SER C . n A 1 75 GLY 75 94 94 GLY GLY C . n A 1 76 LEU 76 95 95 LEU LEU C . n A 1 77 LEU 77 96 96 LEU LEU C . n A 1 78 SER 78 97 97 SER SER C . n A 1 79 PRO 79 98 98 PRO PRO C . n A 1 80 CYS 80 99 99 CYS CYS C . n A 1 81 ASP 81 100 100 ASP ASP C . n A 1 82 ALA 82 101 101 ALA ALA C . n A 1 83 ASP 83 102 102 ASP ASP C . n A 1 84 TRP 84 103 103 TRP TRP C . n A 1 85 LEU 85 104 104 LEU LEU C . n A 1 86 GLY 86 105 105 GLY GLY C . n A 1 87 MET 87 106 106 MET MET C . n A 1 88 LEU 88 107 107 LEU LEU C . n A 1 89 VAL 89 108 108 VAL VAL C . n A 1 90 VAL 90 109 109 VAL VAL C . n A 1 91 LYS 91 110 110 LYS LYS C . n A 1 92 LYS 92 111 111 LYS LYS C . n A 1 93 ALA 93 112 112 ALA ALA C . n A 1 94 LYS 94 113 113 LYS LYS C . n A 1 95 GLY 95 114 114 GLY GLY C . n A 1 96 SER 96 115 115 SER SER C . n A 1 97 ASP 97 116 116 ASP ASP C . n A 1 98 MET 98 117 117 MET MET C . n A 1 99 ILE 99 118 118 ILE ILE C . n A 1 100 VAL 100 119 119 VAL VAL C . n A 1 101 PRO 101 120 120 PRO PRO C . n A 1 102 GLY 102 121 121 GLY GLY C . n A 1 103 PRO 103 122 122 PRO PRO C . n A 1 104 SER 104 123 123 SER SER C . n A 1 105 TYR 105 124 124 TYR TYR C . n A 1 106 LYS 106 125 125 LYS LYS C . n A 1 107 GLY 107 126 126 GLY GLY C . n A 1 108 LYS 108 127 127 LYS LYS C . n A 1 109 VAL 109 128 128 VAL VAL C . n A 1 110 PHE 110 129 129 PHE PHE C . n A 1 111 PHE 111 130 130 PHE PHE C . n A 1 112 GLU 112 131 131 GLU GLU C . n A 1 113 ARG 113 132 132 ARG ARG C . n A 1 114 PRO 114 133 133 PRO PRO C . n A 1 115 THR 115 134 134 THR THR C . n A 1 116 PHE 116 135 135 PHE PHE C . n A 1 117 ASP 117 136 136 ASP ASP C . n A 1 118 GLY 118 137 137 GLY GLY C . n A 1 119 TYR 119 138 138 TYR TYR C . n A 1 120 VAL 120 139 139 VAL VAL C . n A 1 121 GLY 121 140 140 GLY GLY C . n A 1 122 TRP 122 141 141 TRP TRP C . n A 1 123 GLY 123 142 142 GLY GLY C . n A 1 124 CYS 124 143 143 CYS CYS C . n A 1 125 GLY 125 144 144 GLY GLY C . n A 1 126 SER 126 145 145 SER SER C . n A 1 127 GLY 127 146 146 GLY GLY C . n A 1 128 LYS 128 147 147 LYS LYS C . n A 1 129 SER 129 148 148 SER SER C . n A 1 130 ARG 130 149 149 ARG ARG C . n A 1 131 THR 131 150 150 THR THR C . n A 1 132 GLU 132 151 151 GLU GLU C . n A 1 133 SER 133 152 152 SER SER C . n A 1 134 GLY 134 153 153 GLY GLY C . n A 1 135 GLU 135 154 154 GLU GLU C . n A 1 136 LEU 136 155 155 LEU LEU C . n A 1 137 CYS 137 156 156 CYS CYS C . n A 1 138 SER 138 157 157 SER SER C . n A 1 139 SER 139 158 158 SER SER C . n A 1 140 ASP 140 159 159 ASP ASP C . n A 1 141 SER 141 160 160 SER SER C . n A 1 142 GLY 142 161 161 GLY GLY C . n A 1 143 THR 143 162 162 THR THR C . n A 1 144 SER 144 163 163 SER SER C . n A 1 145 SER 145 164 164 SER SER C . n A 1 146 GLY 146 165 165 GLY GLY C . n A 1 147 LEU 147 166 166 LEU LEU C . n A 1 148 LEU 148 167 167 LEU LEU C . n A 1 149 PRO 149 168 168 PRO PRO C . n A 1 150 SER 150 169 169 SER SER C . n A 1 151 ASP 151 170 170 ASP ASP C . n A 1 152 ARG 152 171 171 ARG ARG C . n A 1 153 VAL 153 172 172 VAL VAL C . n A 1 154 LEU 154 173 173 LEU LEU C . n A 1 155 TRP 155 174 174 TRP TRP C . n A 1 156 ILE 156 175 175 ILE ILE C . n A 1 157 GLY 157 176 176 GLY GLY C . n A 1 158 ASP 158 177 177 ASP ASP C . n A 1 159 VAL 159 178 178 VAL VAL C . n A 1 160 ALA 160 179 179 ALA ALA C . n A 1 161 CYS 161 180 180 CYS CYS C . n A 1 162 GLN 162 181 181 GLN GLN C . n A 1 163 PRO 163 182 182 PRO PRO C . n A 1 164 MET 164 183 183 MET MET C . n A 1 165 THR 165 184 184 THR THR C . n A 1 166 PRO 166 185 185 PRO PRO C . n A 1 167 ILE 167 186 186 ILE ILE C . n A 1 168 PRO 168 187 187 PRO PRO C . n A 1 169 GLU 169 188 188 GLU GLU C . n A 1 170 GLU 170 189 189 GLU GLU C . n A 1 171 THR 171 190 190 THR THR C . n A 1 172 PHE 172 191 191 PHE PHE C . n A 1 173 LEU 173 192 192 LEU LEU C . n A 1 174 GLU 174 193 193 GLU GLU C . n A 1 175 LEU 175 194 194 LEU LEU C . n A 1 176 LYS 176 195 195 LYS LYS C . n A 1 177 SER 177 196 196 SER SER C . n A 1 178 PHE 178 197 197 PHE PHE C . n A 1 179 SER 179 198 198 SER SER C . n A 1 180 GLN 180 199 199 GLN GLN C . n A 1 181 SER 181 200 200 SER SER C . n A 1 182 GLU 182 201 201 GLU GLU C . n A 1 183 PHE 183 202 202 PHE PHE C . n A 1 184 PRO 184 203 203 PRO PRO C . n A 1 185 ASP 185 204 204 ASP ASP C . n A 1 186 ILE 186 205 205 ILE ILE C . n A 1 187 CYS 187 206 206 CYS CYS C . n A 1 188 LYS 188 207 207 LYS LYS C . n A 1 189 ILE 189 208 208 ILE ILE C . n A 1 190 ASP 190 209 209 ASP ASP C . n A 1 191 GLY 191 210 210 GLY GLY C . n A 1 192 ILE 192 211 211 ILE ILE C . n A 1 193 VAL 193 212 212 VAL VAL C . n A 1 194 PHE 194 213 213 PHE PHE C . n A 1 195 ASN 195 214 214 ASN ASN C . n A 1 196 GLN 196 215 215 GLN GLN C . n A 1 197 CYS 197 216 216 CYS CYS C . n A 1 198 GLU 198 217 217 GLU GLU C . n A 1 199 GLY 199 218 218 GLY GLY C . n A 1 200 GLU 200 219 219 GLU GLU C . n A 1 201 SER 201 220 220 SER SER C . n A 1 202 LEU 202 221 221 LEU LEU C . n A 1 203 PRO 203 222 222 PRO PRO C . n A 1 204 GLN 204 223 223 GLN GLN C . n A 1 205 PRO 205 224 224 PRO PRO C . n A 1 206 PHE 206 225 225 PHE PHE C . n A 1 207 ASP 207 226 226 ASP ASP C . n A 1 208 VAL 208 227 227 VAL VAL C . n A 1 209 ALA 209 228 228 ALA ALA C . n A 1 210 TRP 210 229 229 TRP TRP C . n A 1 211 MET 211 230 230 MET MET C . n A 1 212 ASP 212 231 231 ASP ASP C . n A 1 213 VAL 213 232 232 VAL VAL C . n A 1 214 GLY 214 233 233 GLY GLY C . n A 1 215 HIS 215 234 234 HIS HIS C . n A 1 216 SER 216 235 235 SER SER C . n A 1 217 HIS 217 236 236 HIS HIS C . n A 1 218 LYS 218 237 237 LYS LYS C . n A 1 219 ILE 219 238 238 ILE ILE C . n A 1 220 ILE 220 239 239 ILE ILE C . n A 1 221 MET 221 240 240 MET MET C . n A 1 222 ARG 222 241 241 ARG ARG C . n A 1 223 GLU 223 242 242 GLU GLU C . n A 1 224 HIS 224 243 243 HIS HIS C . n A 1 225 LYS 225 244 244 LYS LYS C . n A 1 226 THR 226 245 245 THR THR C . n A 1 227 LYS 227 246 246 LYS LYS C . n A 1 228 TRP 228 247 247 TRP TRP C . n A 1 229 VAL 229 248 248 VAL VAL C . n A 1 230 GLN 230 249 249 GLN GLN C . n A 1 231 GLU 231 250 250 GLU GLU C . n A 1 232 SER 232 251 251 SER SER C . n A 1 233 SER 233 252 252 SER SER C . n A 1 234 SER 234 253 253 SER SER C . n A 1 235 LYS 235 254 254 LYS LYS C . n A 1 236 ASP 236 255 255 ASP ASP C . n A 1 237 PHE 237 256 256 PHE PHE C . n A 1 238 VAL 238 257 257 VAL VAL C . n A 1 239 CYS 239 258 258 CYS CYS C . n A 1 240 TYR 240 259 259 TYR TYR C . n A 1 241 LYS 241 260 260 LYS LYS C . n A 1 242 GLU 242 261 261 GLU GLU C . n A 1 243 GLY 243 262 262 GLY GLY C . n A 1 244 THR 244 263 263 THR THR C . n A 1 245 GLY 245 264 264 GLY GLY C . n A 1 246 PRO 246 265 265 PRO PRO C . n A 1 247 CYS 247 266 266 CYS CYS C . n A 1 248 SER 248 267 267 SER SER C . n A 1 249 GLU 249 268 268 GLU GLU C . n A 1 250 SER 250 269 269 SER SER C . n A 1 251 GLU 251 270 270 GLU GLU C . n A 1 252 GLU 252 271 271 GLU GLU C . n A 1 253 LYS 253 272 272 LYS LYS C . n A 1 254 THR 254 273 273 THR THR C . n A 1 255 CYS 255 274 274 CYS CYS C . n A 1 256 LYS 256 275 275 LYS LYS C . n A 1 257 THR 257 276 276 THR THR C . n A 1 258 SER 258 277 277 SER SER C . n A 1 259 GLY 259 278 278 GLY GLY C . n A 1 260 SER 260 279 279 SER SER C . n A 1 261 CYS 261 280 280 CYS CYS C . n A 1 262 ARG 262 281 281 ARG ARG C . n A 1 263 GLY 263 282 282 GLY GLY C . n A 1 264 ASP 264 283 283 ASP ASP C . n A 1 265 MET 265 284 284 MET MET C . n A 1 266 GLN 266 285 285 GLN GLN C . n A 1 267 PHE 267 286 286 PHE PHE C . n A 1 268 CYS 268 287 287 CYS CYS C . n A 1 269 LYS 269 288 288 LYS LYS C . n A 1 270 VAL 270 289 289 VAL VAL C . n A 1 271 ALA 271 290 290 ALA ALA C . n A 1 272 GLY 272 291 291 GLY GLY C . n A 1 273 CYS 273 292 292 CYS CYS C . n A 1 274 GLU 274 293 293 GLU GLU C . n A 1 275 HIS 275 294 294 HIS HIS C . n A 1 276 GLY 276 295 295 GLY GLY C . n A 1 277 GLU 277 296 296 GLU GLU C . n A 1 278 GLU 278 297 297 GLU GLU C . n A 1 279 ALA 279 298 298 ALA ALA C . n A 1 280 SER 280 299 299 SER SER C . n A 1 281 GLU 281 300 300 GLU GLU C . n A 1 282 ALA 282 301 301 ALA ALA C . n A 1 283 LYS 283 302 302 LYS LYS C . n A 1 284 CYS 284 303 303 CYS CYS C . n A 1 285 ARG 285 304 304 ARG ARG C . n A 1 286 CYS 286 305 305 CYS CYS C . n A 1 287 SER 287 306 306 SER SER C . n A 1 288 LEU 288 307 307 LEU LEU C . n A 1 289 VAL 289 308 308 VAL VAL C . n A 1 290 HIS 290 309 309 HIS HIS C . n A 1 291 LYS 291 310 310 LYS LYS C . n A 1 292 PRO 292 311 311 PRO PRO C . n A 1 293 GLY 293 312 312 GLY GLY C . n A 1 294 GLU 294 313 313 GLU GLU C . n A 1 295 VAL 295 314 314 VAL VAL C . n A 1 296 VAL 296 315 315 VAL VAL C . n A 1 297 VAL 297 316 316 VAL VAL C . n A 1 298 SER 298 317 317 SER SER C . n A 1 299 TYR 299 318 318 TYR TYR C . n A 1 300 GLY 300 319 319 GLY GLY C . n A 1 301 GLY 301 320 320 GLY GLY C . n A 1 302 MET 302 321 321 MET MET C . n A 1 303 ARG 303 322 322 ARG ARG C . n A 1 304 VAL 304 323 323 VAL VAL C . n A 1 305 ARG 305 324 324 ARG ARG C . n A 1 306 PRO 306 325 325 PRO PRO C . n A 1 307 LYS 307 326 326 LYS LYS C . n A 1 308 CYS 308 327 327 CYS CYS C . n A 1 309 TYR 309 328 328 TYR TYR C . n A 1 310 GLY 310 329 329 GLY GLY C . n A 1 311 PHE 311 330 330 PHE PHE C . n A 1 312 SER 312 331 331 SER SER C . n A 1 313 ARG 313 332 332 ARG ARG C . n A 1 314 MET 314 333 333 MET MET C . n A 1 315 MET 315 334 334 MET MET C . n A 1 316 ALA 316 335 335 ALA ALA C . n A 1 317 THR 317 336 336 THR THR C . n A 1 318 LEU 318 337 337 LEU LEU C . n A 1 319 GLU 319 338 338 GLU GLU C . n A 1 320 VAL 320 339 339 VAL VAL C . n A 1 321 ASN 321 340 340 ASN ASN C . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 810 ? 1 MORE 8 ? 1 'SSA (A^2)' 14620 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-09-13 2 'Structure model' 1 1 2017-09-20 3 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' atom_site 3 3 'Structure model' atom_site_anisotrop 4 3 'Structure model' chem_comp 5 3 'Structure model' entity 6 3 'Structure model' pdbx_branch_scheme 7 3 'Structure model' pdbx_chem_comp_identifier 8 3 'Structure model' pdbx_entity_branch 9 3 'Structure model' pdbx_entity_branch_descriptor 10 3 'Structure model' pdbx_entity_branch_link 11 3 'Structure model' pdbx_entity_branch_list 12 3 'Structure model' pdbx_entity_nonpoly 13 3 'Structure model' pdbx_nonpoly_scheme 14 3 'Structure model' pdbx_struct_assembly_gen 15 3 'Structure model' pdbx_validate_close_contact 16 3 'Structure model' struct_asym 17 3 'Structure model' struct_conn 18 3 'Structure model' struct_site 19 3 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 3 'Structure model' '_atom_site.auth_asym_id' 5 3 'Structure model' '_atom_site.auth_seq_id' 6 3 'Structure model' '_atom_site.label_asym_id' 7 3 'Structure model' '_atom_site.label_entity_id' 8 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 9 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 10 3 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 11 3 'Structure model' '_chem_comp.name' 12 3 'Structure model' '_chem_comp.type' 13 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 14 3 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 15 3 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 16 3 'Structure model' '_struct_conn.pdbx_dist_value' 17 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 3 'Structure model' '_struct_conn.pdbx_role' 19 3 'Structure model' '_struct_conn.pdbx_value_order' 20 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 21 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 27 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 28 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 29 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 30 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 31 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 32 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 33 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -19.1970 _pdbx_refine_tls.origin_y 31.4017 _pdbx_refine_tls.origin_z -7.4899 _pdbx_refine_tls.T[1][1] 0.4754 _pdbx_refine_tls.T[2][2] 0.5819 _pdbx_refine_tls.T[3][3] 0.5872 _pdbx_refine_tls.T[1][2] 0.0078 _pdbx_refine_tls.T[1][3] 0.0652 _pdbx_refine_tls.T[2][3] 0.1150 _pdbx_refine_tls.L[1][1] 2.8594 _pdbx_refine_tls.L[2][2] 3.5588 _pdbx_refine_tls.L[3][3] 3.2754 _pdbx_refine_tls.L[1][2] 1.4710 _pdbx_refine_tls.L[1][3] 1.1299 _pdbx_refine_tls.L[2][3] 1.0354 _pdbx_refine_tls.S[1][1] 0.3089 _pdbx_refine_tls.S[1][2] -0.3227 _pdbx_refine_tls.S[1][3] -0.4155 _pdbx_refine_tls.S[2][1] 0.1767 _pdbx_refine_tls.S[2][2] -0.0457 _pdbx_refine_tls.S[2][3] -0.2761 _pdbx_refine_tls.S[3][1] 0.2200 _pdbx_refine_tls.S[3][2] -0.0682 _pdbx_refine_tls.S[3][3] -0.2550 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.11.1_2575: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O C GLY 142 ? ? NH2 C ARG 149 ? ? 1.56 2 1 NH2 C ARG 281 ? ? CE C LYS 302 ? ? 1.77 3 1 NE C ARG 281 ? ? CE C LYS 302 ? ? 1.89 4 1 ND2 C ASN 63 ? ? O5 A NAG 1 ? ? 1.93 5 1 NH2 C ARG 281 ? ? NZ C LYS 302 ? ? 1.95 6 1 CZ C ARG 281 ? ? NZ C LYS 302 ? ? 1.99 7 1 CZ C ARG 281 ? ? CE C LYS 302 ? ? 2.06 8 1 O C GLU 201 ? ? NH1 C ARG 241 ? ? 2.15 9 1 OD1 C ASN 63 ? ? C1 A NAG 1 ? ? 2.17 10 1 C C GLY 142 ? ? NH2 C ARG 149 ? ? 2.18 11 1 NE C ARG 281 ? ? NZ C LYS 302 ? ? 2.19 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CG1 _pdbx_validate_rmsd_angle.auth_asym_id_1 C _pdbx_validate_rmsd_angle.auth_comp_id_1 ILE _pdbx_validate_rmsd_angle.auth_seq_id_1 175 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 C _pdbx_validate_rmsd_angle.auth_comp_id_2 ILE _pdbx_validate_rmsd_angle.auth_seq_id_2 175 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CG2 _pdbx_validate_rmsd_angle.auth_asym_id_3 C _pdbx_validate_rmsd_angle.auth_comp_id_3 ILE _pdbx_validate_rmsd_angle.auth_seq_id_3 175 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 97.95 _pdbx_validate_rmsd_angle.angle_target_value 111.40 _pdbx_validate_rmsd_angle.angle_deviation -13.45 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.20 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE C 25 ? ? -128.58 -62.17 2 1 LEU C 54 ? ? 53.35 19.99 3 1 ARG C 74 ? ? 72.45 -28.30 4 1 GLU C 86 ? ? -69.60 99.05 5 1 CYS C 216 ? ? -140.88 -30.97 6 1 GLU C 217 ? ? 59.68 -50.16 7 1 PHE C 225 ? ? -165.37 105.46 8 1 ARG C 241 ? ? -81.51 -86.47 9 1 HIS C 243 ? ? -172.20 144.70 10 1 GLU C 296 ? ? -82.11 -96.18 11 1 GLU C 297 ? ? 50.53 -177.92 12 1 ALA C 298 ? ? -178.11 -35.08 13 1 SER C 299 ? ? -173.43 -176.61 14 1 GLU C 300 ? ? 36.88 106.79 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C ASP 20 ? A ASP 1 2 1 Y 1 C SER 21 ? A SER 2 3 1 Y 1 C GLY 22 ? A GLY 3 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 A NAG 1 C NAG 605 n B 2 NAG 2 A NAG 2 C NAG 606 n B 2 MAN 3 A MAN 3 C MAN 607 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DManpa1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1a_1-5]/1-1-2/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][a-D-Manp]{}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 MAN C1 O1 2 NAG O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 MAN 3 n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 MAN ? ? MAN ? ? 'SUBJECT OF INVESTIGATION' ? 2 NAG ? ? NAG ? ? 'SUBJECT OF INVESTIGATION' ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #