data_5YNX # _entry.id 5YNX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5YNX pdb_00005ynx 10.2210/pdb5ynx/pdb WWPDB D_1300004913 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-03-13 2 'Structure model' 1 1 2019-09-25 3 'Structure model' 1 2 2024-03-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' struct_ncs_dom_lim # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 3 'Structure model' '_database_2.pdbx_DOI' 13 3 'Structure model' '_database_2.pdbx_database_accession' 14 3 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 15 3 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 16 3 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 17 3 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 18 3 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 19 3 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 20 3 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 21 3 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5YNX _pdbx_database_status.recvd_initial_deposition_date 2017-10-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ng, C.L.' 1 ? 'Chew, F.T.' 2 ? 'Pang, S.L.' 3 ? 'Ho, K.L.' 4 ? 'Teh, A.H.' 5 ? 'Waterman, J.' 6 ? 'Rambo, R.' 7 ? 'Mathavan, I.' 8 ? 'Beis, K.' 9 ? 'Say, Y.H.' 10 ? # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? UK ? ? primary 'Sci Rep' ? ? 2045-2322 ? ? 9 ? 4933 4933 'Crystal structure and epitope analysis of house dust mite allergen Der f 21.' 2019 ? 10.1038/s41598-019-40879-x 30894561 ? ? ? ? ? ? ? ? US ? ? 1 'Acta Crystallogr F Struct Biol Commun' ACSFEN ? 2053-230X ? ? 71 ? 1396 1400 ;Cloning, expression, purification, characterization, crystallization and X-ray crystallographic analysis of recombinant Der f 21 (rDer f 21) from Dermatophagoides farinae ; 2015 ? 10.1107/S2053230X1501818X 26527267 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pang, S.L.' 1 ? primary 'Ho, K.L.' 2 ? primary 'Waterman, J.' 3 ? primary 'Rambo, R.P.' 4 ? primary 'Teh, A.H.' 5 0000-0001-6365-574X primary 'Mathavan, I.' 6 ? primary 'Harris, G.' 7 0000-0002-4587-4620 primary 'Beis, K.' 8 0000-0001-5727-4721 primary 'Say, Y.H.' 9 ? primary 'Anusha, M.S.' 10 ? primary 'Sio, Y.Y.' 11 ? primary 'Chew, F.T.' 12 0000-0003-1337-5146 primary 'Ng, C.L.' 13 ? 1 'Ng, C.L.' 14 ? 1 'Chew, F.T.' 15 ? 1 'Pang, S.L.' 16 ? 1 'Ho, K.L.' 17 ? 1 'Teh, A.H.' 18 ? 1 'Waterman, J.' 19 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Allergen Der f 21' 13950.055 2 ? ? ? ? 2 non-polymer syn 'PENTAETHYLENE GLYCOL' 238.278 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 non-polymer syn BETA-MERCAPTOETHANOL 78.133 1 ? ? ? ? 5 water nat water 18.015 261 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Der f 5.02 allergen' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GLVPRGSEDKWRNAFDHMLMEEFEEKMDQIEHGLLMLSEQYKELEKTKSKELKEQILRELTIAENYLRGALKFMQQEAKR TDLNMFERYNFETAVSTIEILVKDLAELAKKVKAVKSD ; _entity_poly.pdbx_seq_one_letter_code_can ;GLVPRGSEDKWRNAFDHMLMEEFEEKMDQIEHGLLMLSEQYKELEKTKSKELKEQILRELTIAENYLRGALKFMQQEAKR TDLNMFERYNFETAVSTIEILVKDLAELAKKVKAVKSD ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PENTAETHYLENE GLYCOL' 1PE 3 GLYCEROL GOL 4 BETA-MERCAPTOETHANOL BME 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 LEU n 1 3 VAL n 1 4 PRO n 1 5 ARG n 1 6 GLY n 1 7 SER n 1 8 GLU n 1 9 ASP n 1 10 LYS n 1 11 TRP n 1 12 ARG n 1 13 ASN n 1 14 ALA n 1 15 PHE n 1 16 ASP n 1 17 HIS n 1 18 MET n 1 19 LEU n 1 20 MET n 1 21 GLU n 1 22 GLU n 1 23 PHE n 1 24 GLU n 1 25 GLU n 1 26 LYS n 1 27 MET n 1 28 ASP n 1 29 GLN n 1 30 ILE n 1 31 GLU n 1 32 HIS n 1 33 GLY n 1 34 LEU n 1 35 LEU n 1 36 MET n 1 37 LEU n 1 38 SER n 1 39 GLU n 1 40 GLN n 1 41 TYR n 1 42 LYS n 1 43 GLU n 1 44 LEU n 1 45 GLU n 1 46 LYS n 1 47 THR n 1 48 LYS n 1 49 SER n 1 50 LYS n 1 51 GLU n 1 52 LEU n 1 53 LYS n 1 54 GLU n 1 55 GLN n 1 56 ILE n 1 57 LEU n 1 58 ARG n 1 59 GLU n 1 60 LEU n 1 61 THR n 1 62 ILE n 1 63 ALA n 1 64 GLU n 1 65 ASN n 1 66 TYR n 1 67 LEU n 1 68 ARG n 1 69 GLY n 1 70 ALA n 1 71 LEU n 1 72 LYS n 1 73 PHE n 1 74 MET n 1 75 GLN n 1 76 GLN n 1 77 GLU n 1 78 ALA n 1 79 LYS n 1 80 ARG n 1 81 THR n 1 82 ASP n 1 83 LEU n 1 84 ASN n 1 85 MET n 1 86 PHE n 1 87 GLU n 1 88 ARG n 1 89 TYR n 1 90 ASN n 1 91 PHE n 1 92 GLU n 1 93 THR n 1 94 ALA n 1 95 VAL n 1 96 SER n 1 97 THR n 1 98 ILE n 1 99 GLU n 1 100 ILE n 1 101 LEU n 1 102 VAL n 1 103 LYS n 1 104 ASP n 1 105 LEU n 1 106 ALA n 1 107 GLU n 1 108 LEU n 1 109 ALA n 1 110 LYS n 1 111 LYS n 1 112 VAL n 1 113 LYS n 1 114 ALA n 1 115 VAL n 1 116 LYS n 1 117 SER n 1 118 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 119 _entity_src_gen.gene_src_common_name 'American house dust mite' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Dermatophagoides farinae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6954 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta-gami (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-32 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1PE non-polymer . 'PENTAETHYLENE GLYCOL' PEG400 'C10 H22 O6' 238.278 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BME non-polymer . BETA-MERCAPTOETHANOL ? 'C2 H6 O S' 78.133 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 TRP 11 11 11 TRP TRP A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 HIS 17 17 17 HIS HIS A . n A 1 18 MET 18 18 18 MET MET A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 MET 20 20 20 MET MET A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 MET 27 27 27 MET MET A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 GLN 29 29 29 GLN GLN A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 HIS 32 32 32 HIS HIS A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 MET 36 36 36 MET MET A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 TYR 41 41 41 TYR TYR A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 TYR 66 66 66 TYR TYR A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 PHE 73 73 73 PHE PHE A . n A 1 74 MET 74 74 74 MET MET A . n A 1 75 GLN 75 75 75 GLN GLN A . n A 1 76 GLN 76 76 76 GLN GLN A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 MET 85 85 85 MET MET A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 ARG 88 88 88 ARG ARG A . n A 1 89 TYR 89 89 89 TYR TYR A . n A 1 90 ASN 90 90 90 ASN ASN A . n A 1 91 PHE 91 91 91 PHE PHE A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 GLU 99 99 99 GLU GLU A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 LYS 103 103 103 LYS LYS A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 LYS 111 111 111 LYS LYS A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 LYS 116 116 116 LYS LYS A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 ASP 118 118 ? ? ? A . n B 1 1 GLY 1 1 1 GLY GLY B . n B 1 2 LEU 2 2 2 LEU LEU B . n B 1 3 VAL 3 3 3 VAL VAL B . n B 1 4 PRO 4 4 4 PRO PRO B . n B 1 5 ARG 5 5 5 ARG ARG B . n B 1 6 GLY 6 6 6 GLY GLY B . n B 1 7 SER 7 7 7 SER SER B . n B 1 8 GLU 8 8 8 GLU GLU B . n B 1 9 ASP 9 9 9 ASP ASP B . n B 1 10 LYS 10 10 10 LYS LYS B . n B 1 11 TRP 11 11 11 TRP TRP B . n B 1 12 ARG 12 12 12 ARG ARG B . n B 1 13 ASN 13 13 13 ASN ASN B . n B 1 14 ALA 14 14 14 ALA ALA B . n B 1 15 PHE 15 15 15 PHE PHE B . n B 1 16 ASP 16 16 16 ASP ASP B . n B 1 17 HIS 17 17 17 HIS HIS B . n B 1 18 MET 18 18 18 MET MET B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 MET 20 20 20 MET MET B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 GLU 22 22 22 GLU GLU B . n B 1 23 PHE 23 23 23 PHE PHE B . n B 1 24 GLU 24 24 24 GLU GLU B . n B 1 25 GLU 25 25 25 GLU GLU B . n B 1 26 LYS 26 26 26 LYS LYS B . n B 1 27 MET 27 27 27 MET MET B . n B 1 28 ASP 28 28 28 ASP ASP B . n B 1 29 GLN 29 29 29 GLN GLN B . n B 1 30 ILE 30 30 30 ILE ILE B . n B 1 31 GLU 31 31 31 GLU GLU B . n B 1 32 HIS 32 32 32 HIS HIS B . n B 1 33 GLY 33 33 33 GLY GLY B . n B 1 34 LEU 34 34 34 LEU LEU B . n B 1 35 LEU 35 35 35 LEU LEU B . n B 1 36 MET 36 36 36 MET MET B . n B 1 37 LEU 37 37 37 LEU LEU B . n B 1 38 SER 38 38 38 SER SER B . n B 1 39 GLU 39 39 39 GLU GLU B . n B 1 40 GLN 40 40 40 GLN GLN B . n B 1 41 TYR 41 41 41 TYR TYR B . n B 1 42 LYS 42 42 42 LYS LYS B . n B 1 43 GLU 43 43 43 GLU GLU B . n B 1 44 LEU 44 44 44 LEU LEU B . n B 1 45 GLU 45 45 45 GLU GLU B . n B 1 46 LYS 46 46 46 LYS LYS B . n B 1 47 THR 47 47 47 THR THR B . n B 1 48 LYS 48 48 48 LYS LYS B . n B 1 49 SER 49 49 49 SER SER B . n B 1 50 LYS 50 50 50 LYS LYS B . n B 1 51 GLU 51 51 51 GLU GLU B . n B 1 52 LEU 52 52 52 LEU LEU B . n B 1 53 LYS 53 53 53 LYS LYS B . n B 1 54 GLU 54 54 54 GLU GLU B . n B 1 55 GLN 55 55 55 GLN GLN B . n B 1 56 ILE 56 56 56 ILE ILE B . n B 1 57 LEU 57 57 57 LEU LEU B . n B 1 58 ARG 58 58 58 ARG ARG B . n B 1 59 GLU 59 59 59 GLU GLU B . n B 1 60 LEU 60 60 60 LEU LEU B . n B 1 61 THR 61 61 61 THR THR B . n B 1 62 ILE 62 62 62 ILE ILE B . n B 1 63 ALA 63 63 63 ALA ALA B . n B 1 64 GLU 64 64 64 GLU GLU B . n B 1 65 ASN 65 65 65 ASN ASN B . n B 1 66 TYR 66 66 66 TYR TYR B . n B 1 67 LEU 67 67 67 LEU LEU B . n B 1 68 ARG 68 68 68 ARG ARG B . n B 1 69 GLY 69 69 69 GLY GLY B . n B 1 70 ALA 70 70 70 ALA ALA B . n B 1 71 LEU 71 71 71 LEU LEU B . n B 1 72 LYS 72 72 72 LYS LYS B . n B 1 73 PHE 73 73 73 PHE PHE B . n B 1 74 MET 74 74 74 MET MET B . n B 1 75 GLN 75 75 75 GLN GLN B . n B 1 76 GLN 76 76 76 GLN GLN B . n B 1 77 GLU 77 77 77 GLU GLU B . n B 1 78 ALA 78 78 78 ALA ALA B . n B 1 79 LYS 79 79 79 LYS LYS B . n B 1 80 ARG 80 80 80 ARG ARG B . n B 1 81 THR 81 81 81 THR THR B . n B 1 82 ASP 82 82 82 ASP ASP B . n B 1 83 LEU 83 83 83 LEU LEU B . n B 1 84 ASN 84 84 84 ASN ASN B . n B 1 85 MET 85 85 85 MET MET B . n B 1 86 PHE 86 86 86 PHE PHE B . n B 1 87 GLU 87 87 87 GLU GLU B . n B 1 88 ARG 88 88 88 ARG ARG B . n B 1 89 TYR 89 89 89 TYR TYR B . n B 1 90 ASN 90 90 90 ASN ASN B . n B 1 91 PHE 91 91 91 PHE PHE B . n B 1 92 GLU 92 92 92 GLU GLU B . n B 1 93 THR 93 93 93 THR THR B . n B 1 94 ALA 94 94 94 ALA ALA B . n B 1 95 VAL 95 95 95 VAL VAL B . n B 1 96 SER 96 96 96 SER SER B . n B 1 97 THR 97 97 97 THR THR B . n B 1 98 ILE 98 98 98 ILE ILE B . n B 1 99 GLU 99 99 99 GLU GLU B . n B 1 100 ILE 100 100 100 ILE ILE B . n B 1 101 LEU 101 101 101 LEU LEU B . n B 1 102 VAL 102 102 102 VAL VAL B . n B 1 103 LYS 103 103 103 LYS LYS B . n B 1 104 ASP 104 104 104 ASP ASP B . n B 1 105 LEU 105 105 105 LEU LEU B . n B 1 106 ALA 106 106 106 ALA ALA B . n B 1 107 GLU 107 107 107 GLU GLU B . n B 1 108 LEU 108 108 108 LEU LEU B . n B 1 109 ALA 109 109 109 ALA ALA B . n B 1 110 LYS 110 110 110 LYS LYS B . n B 1 111 LYS 111 111 111 LYS LYS B . n B 1 112 VAL 112 112 112 VAL VAL B . n B 1 113 LYS 113 113 113 LYS LYS B . n B 1 114 ALA 114 114 114 ALA ALA B . n B 1 115 VAL 115 115 115 VAL VAL B . n B 1 116 LYS 116 116 116 LYS LYS B . n B 1 117 SER 117 117 117 SER SER B . n B 1 118 ASP 118 118 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1PE 1 201 1 1PE 1PE A . D 3 GOL 1 202 1 GOL GOL A . E 4 BME 1 201 1 BME BME B . F 3 GOL 1 202 2 GOL GOL B . G 5 HOH 1 301 210 HOH HOH A . G 5 HOH 2 302 2 HOH HOH A . G 5 HOH 3 303 217 HOH HOH A . G 5 HOH 4 304 175 HOH HOH A . G 5 HOH 5 305 229 HOH HOH A . G 5 HOH 6 306 135 HOH HOH A . G 5 HOH 7 307 126 HOH HOH A . G 5 HOH 8 308 228 HOH HOH A . G 5 HOH 9 309 13 HOH HOH A . G 5 HOH 10 310 32 HOH HOH A . G 5 HOH 11 311 104 HOH HOH A . G 5 HOH 12 312 226 HOH HOH A . G 5 HOH 13 313 227 HOH HOH A . G 5 HOH 14 314 61 HOH HOH A . G 5 HOH 15 315 172 HOH HOH A . G 5 HOH 16 316 129 HOH HOH A . G 5 HOH 17 317 23 HOH HOH A . G 5 HOH 18 318 91 HOH HOH A . G 5 HOH 19 319 96 HOH HOH A . G 5 HOH 20 320 70 HOH HOH A . G 5 HOH 21 321 235 HOH HOH A . G 5 HOH 22 322 27 HOH HOH A . G 5 HOH 23 323 83 HOH HOH A . G 5 HOH 24 324 171 HOH HOH A . G 5 HOH 25 325 190 HOH HOH A . G 5 HOH 26 326 26 HOH HOH A . G 5 HOH 27 327 76 HOH HOH A . G 5 HOH 28 328 15 HOH HOH A . G 5 HOH 29 329 152 HOH HOH A . G 5 HOH 30 330 103 HOH HOH A . G 5 HOH 31 331 125 HOH HOH A . G 5 HOH 32 332 140 HOH HOH A . G 5 HOH 33 333 167 HOH HOH A . G 5 HOH 34 334 107 HOH HOH A . G 5 HOH 35 335 49 HOH HOH A . G 5 HOH 36 336 54 HOH HOH A . G 5 HOH 37 337 6 HOH HOH A . G 5 HOH 38 338 187 HOH HOH A . G 5 HOH 39 339 240 HOH HOH A . G 5 HOH 40 340 188 HOH HOH A . G 5 HOH 41 341 43 HOH HOH A . G 5 HOH 42 342 251 HOH HOH A . G 5 HOH 43 343 245 HOH HOH A . G 5 HOH 44 344 211 HOH HOH A . G 5 HOH 45 345 134 HOH HOH A . G 5 HOH 46 346 92 HOH HOH A . G 5 HOH 47 347 136 HOH HOH A . G 5 HOH 48 348 139 HOH HOH A . G 5 HOH 49 349 64 HOH HOH A . G 5 HOH 50 350 242 HOH HOH A . G 5 HOH 51 351 12 HOH HOH A . G 5 HOH 52 352 53 HOH HOH A . G 5 HOH 53 353 177 HOH HOH A . G 5 HOH 54 354 143 HOH HOH A . G 5 HOH 55 355 223 HOH HOH A . G 5 HOH 56 356 16 HOH HOH A . G 5 HOH 57 357 82 HOH HOH A . G 5 HOH 58 358 94 HOH HOH A . G 5 HOH 59 359 178 HOH HOH A . G 5 HOH 60 360 179 HOH HOH A . G 5 HOH 61 361 86 HOH HOH A . G 5 HOH 62 362 50 HOH HOH A . G 5 HOH 63 363 89 HOH HOH A . G 5 HOH 64 364 141 HOH HOH A . G 5 HOH 65 365 230 HOH HOH A . G 5 HOH 66 366 158 HOH HOH A . G 5 HOH 67 367 159 HOH HOH A . G 5 HOH 68 368 165 HOH HOH A . G 5 HOH 69 369 142 HOH HOH A . G 5 HOH 70 370 236 HOH HOH A . G 5 HOH 71 371 34 HOH HOH A . G 5 HOH 72 372 77 HOH HOH A . G 5 HOH 73 373 90 HOH HOH A . G 5 HOH 74 374 71 HOH HOH A . G 5 HOH 75 375 237 HOH HOH A . G 5 HOH 76 376 123 HOH HOH A . G 5 HOH 77 377 166 HOH HOH A . G 5 HOH 78 378 110 HOH HOH A . G 5 HOH 79 379 150 HOH HOH A . G 5 HOH 80 380 173 HOH HOH A . G 5 HOH 81 381 37 HOH HOH A . G 5 HOH 82 382 67 HOH HOH A . G 5 HOH 83 383 244 HOH HOH A . G 5 HOH 84 384 4 HOH HOH A . G 5 HOH 85 385 65 HOH HOH A . G 5 HOH 86 386 233 HOH HOH A . G 5 HOH 87 387 163 HOH HOH A . G 5 HOH 88 388 225 HOH HOH A . G 5 HOH 89 389 183 HOH HOH A . G 5 HOH 90 390 209 HOH HOH A . G 5 HOH 91 391 93 HOH HOH A . G 5 HOH 92 392 154 HOH HOH A . G 5 HOH 93 393 208 HOH HOH A . G 5 HOH 94 394 66 HOH HOH A . G 5 HOH 95 395 253 HOH HOH A . G 5 HOH 96 396 128 HOH HOH A . G 5 HOH 97 397 191 HOH HOH A . G 5 HOH 98 398 257 HOH HOH A . G 5 HOH 99 399 212 HOH HOH A . G 5 HOH 100 400 186 HOH HOH A . G 5 HOH 101 401 205 HOH HOH A . G 5 HOH 102 402 117 HOH HOH A . G 5 HOH 103 403 222 HOH HOH A . G 5 HOH 104 404 213 HOH HOH A . G 5 HOH 105 405 189 HOH HOH A . G 5 HOH 106 406 155 HOH HOH A . G 5 HOH 107 407 147 HOH HOH A . G 5 HOH 108 408 201 HOH HOH A . G 5 HOH 109 409 181 HOH HOH A . G 5 HOH 110 410 202 HOH HOH A . G 5 HOH 111 411 259 HOH HOH A . G 5 HOH 112 412 105 HOH HOH A . G 5 HOH 113 413 203 HOH HOH A . G 5 HOH 114 414 260 HOH HOH A . G 5 HOH 115 415 204 HOH HOH A . H 5 HOH 1 301 232 HOH HOH B . H 5 HOH 2 302 215 HOH HOH B . H 5 HOH 3 303 199 HOH HOH B . H 5 HOH 4 304 164 HOH HOH B . H 5 HOH 5 305 219 HOH HOH B . H 5 HOH 6 306 22 HOH HOH B . H 5 HOH 7 307 218 HOH HOH B . H 5 HOH 8 308 207 HOH HOH B . H 5 HOH 9 309 252 HOH HOH B . H 5 HOH 10 310 68 HOH HOH B . H 5 HOH 11 311 231 HOH HOH B . H 5 HOH 12 312 114 HOH HOH B . H 5 HOH 13 313 38 HOH HOH B . H 5 HOH 14 314 168 HOH HOH B . H 5 HOH 15 315 40 HOH HOH B . H 5 HOH 16 316 148 HOH HOH B . H 5 HOH 17 317 99 HOH HOH B . H 5 HOH 18 318 14 HOH HOH B . H 5 HOH 19 319 120 HOH HOH B . H 5 HOH 20 320 156 HOH HOH B . H 5 HOH 21 321 216 HOH HOH B . H 5 HOH 22 322 144 HOH HOH B . H 5 HOH 23 323 85 HOH HOH B . H 5 HOH 24 324 220 HOH HOH B . H 5 HOH 25 325 73 HOH HOH B . H 5 HOH 26 326 59 HOH HOH B . H 5 HOH 27 327 1 HOH HOH B . H 5 HOH 28 328 137 HOH HOH B . H 5 HOH 29 329 46 HOH HOH B . H 5 HOH 30 330 145 HOH HOH B . H 5 HOH 31 331 174 HOH HOH B . H 5 HOH 32 332 234 HOH HOH B . H 5 HOH 33 333 57 HOH HOH B . H 5 HOH 34 334 169 HOH HOH B . H 5 HOH 35 335 52 HOH HOH B . H 5 HOH 36 336 3 HOH HOH B . H 5 HOH 37 337 250 HOH HOH B . H 5 HOH 38 338 8 HOH HOH B . H 5 HOH 39 339 95 HOH HOH B . H 5 HOH 40 340 239 HOH HOH B . H 5 HOH 41 341 10 HOH HOH B . H 5 HOH 42 342 62 HOH HOH B . H 5 HOH 43 343 79 HOH HOH B . H 5 HOH 44 344 221 HOH HOH B . H 5 HOH 45 345 78 HOH HOH B . H 5 HOH 46 346 9 HOH HOH B . H 5 HOH 47 347 115 HOH HOH B . H 5 HOH 48 348 247 HOH HOH B . H 5 HOH 49 349 88 HOH HOH B . H 5 HOH 50 350 18 HOH HOH B . H 5 HOH 51 351 111 HOH HOH B . H 5 HOH 52 352 31 HOH HOH B . H 5 HOH 53 353 30 HOH HOH B . H 5 HOH 54 354 17 HOH HOH B . H 5 HOH 55 355 84 HOH HOH B . H 5 HOH 56 356 47 HOH HOH B . H 5 HOH 57 357 7 HOH HOH B . H 5 HOH 58 358 112 HOH HOH B . H 5 HOH 59 359 102 HOH HOH B . H 5 HOH 60 360 5 HOH HOH B . H 5 HOH 61 361 98 HOH HOH B . H 5 HOH 62 362 41 HOH HOH B . H 5 HOH 63 363 121 HOH HOH B . H 5 HOH 64 364 29 HOH HOH B . H 5 HOH 65 365 243 HOH HOH B . H 5 HOH 66 366 238 HOH HOH B . H 5 HOH 67 367 35 HOH HOH B . H 5 HOH 68 368 20 HOH HOH B . H 5 HOH 69 369 138 HOH HOH B . H 5 HOH 70 370 51 HOH HOH B . H 5 HOH 71 371 58 HOH HOH B . H 5 HOH 72 372 25 HOH HOH B . H 5 HOH 73 373 24 HOH HOH B . H 5 HOH 74 374 108 HOH HOH B . H 5 HOH 75 375 100 HOH HOH B . H 5 HOH 76 376 127 HOH HOH B . H 5 HOH 77 377 44 HOH HOH B . H 5 HOH 78 378 170 HOH HOH B . H 5 HOH 79 379 60 HOH HOH B . H 5 HOH 80 380 48 HOH HOH B . H 5 HOH 81 381 11 HOH HOH B . H 5 HOH 82 382 132 HOH HOH B . H 5 HOH 83 383 241 HOH HOH B . H 5 HOH 84 384 39 HOH HOH B . H 5 HOH 85 385 55 HOH HOH B . H 5 HOH 86 386 246 HOH HOH B . H 5 HOH 87 387 119 HOH HOH B . H 5 HOH 88 388 33 HOH HOH B . H 5 HOH 89 389 160 HOH HOH B . H 5 HOH 90 390 124 HOH HOH B . H 5 HOH 91 391 131 HOH HOH B . H 5 HOH 92 392 80 HOH HOH B . H 5 HOH 93 393 248 HOH HOH B . H 5 HOH 94 394 81 HOH HOH B . H 5 HOH 95 395 122 HOH HOH B . H 5 HOH 96 396 161 HOH HOH B . H 5 HOH 97 397 180 HOH HOH B . H 5 HOH 98 398 87 HOH HOH B . H 5 HOH 99 399 56 HOH HOH B . H 5 HOH 100 400 19 HOH HOH B . H 5 HOH 101 401 36 HOH HOH B . H 5 HOH 102 402 133 HOH HOH B . H 5 HOH 103 403 72 HOH HOH B . H 5 HOH 104 404 69 HOH HOH B . H 5 HOH 105 405 21 HOH HOH B . H 5 HOH 106 406 198 HOH HOH B . H 5 HOH 107 407 146 HOH HOH B . H 5 HOH 108 408 192 HOH HOH B . H 5 HOH 109 409 28 HOH HOH B . H 5 HOH 110 410 101 HOH HOH B . H 5 HOH 111 411 194 HOH HOH B . H 5 HOH 112 412 224 HOH HOH B . H 5 HOH 113 413 182 HOH HOH B . H 5 HOH 114 414 74 HOH HOH B . H 5 HOH 115 415 214 HOH HOH B . H 5 HOH 116 416 200 HOH HOH B . H 5 HOH 117 417 196 HOH HOH B . H 5 HOH 118 418 258 HOH HOH B . H 5 HOH 119 419 109 HOH HOH B . H 5 HOH 120 420 193 HOH HOH B . H 5 HOH 121 421 116 HOH HOH B . H 5 HOH 122 422 185 HOH HOH B . H 5 HOH 123 423 157 HOH HOH B . H 5 HOH 124 424 153 HOH HOH B . H 5 HOH 125 425 149 HOH HOH B . H 5 HOH 126 426 184 HOH HOH B . H 5 HOH 127 427 256 HOH HOH B . H 5 HOH 128 428 261 HOH HOH B . H 5 HOH 129 429 176 HOH HOH B . H 5 HOH 130 430 162 HOH HOH B . H 5 HOH 131 431 113 HOH HOH B . H 5 HOH 132 432 97 HOH HOH B . H 5 HOH 133 433 63 HOH HOH B . H 5 HOH 134 434 195 HOH HOH B . H 5 HOH 135 435 45 HOH HOH B . H 5 HOH 136 436 249 HOH HOH B . H 5 HOH 137 437 197 HOH HOH B . H 5 HOH 138 438 106 HOH HOH B . H 5 HOH 139 439 130 HOH HOH B . H 5 HOH 140 440 206 HOH HOH B . H 5 HOH 141 441 255 HOH HOH B . H 5 HOH 142 442 118 HOH HOH B . H 5 HOH 143 443 42 HOH HOH B . H 5 HOH 144 444 254 HOH HOH B . H 5 HOH 145 445 151 HOH HOH B . H 5 HOH 146 446 75 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0073 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 5 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 6 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 125.840 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5YNX _cell.details ? _cell.formula_units_Z ? _cell.length_a 123.456 _cell.length_a_esd ? _cell.length_b 27.714 _cell.length_b_esd ? _cell.length_c 90.252 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5YNX _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5YNX _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.26 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.62 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.19M Tris pH 8.0, 32% PEG 400' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-07-18 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5YNX _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.49 _reflns.d_resolution_low 19.60 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 41016 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.3 _reflns.pdbx_Rmerge_I_obs 0.026 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.031 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 22.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.016 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.0 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.49 _reflns_shell.d_res_low 1.52 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1937 _reflns_shell.percent_possible_all 95.6 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.258 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.1 _reflns_shell.pdbx_Rsym_value 0.32 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.187 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.977 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.8900 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.4400 _refine.aniso_B[2][2] 0.1700 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 0.0400 _refine.B_iso_max 101.960 _refine.B_iso_mean 31.9890 _refine.B_iso_min 13.800 _refine.correlation_coeff_Fo_to_Fc 0.9800 _refine.correlation_coeff_Fo_to_Fc_free 0.9620 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5YNX _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.4900 _refine.ls_d_res_low 19.6000 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 38905 _refine.ls_number_reflns_R_free 2111 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.4200 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1417 _refine.ls_R_factor_R_free 0.1983 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1386 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.0740 _refine.pdbx_overall_ESU_R_Free 0.0730 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 3.4600 _refine.overall_SU_ML 0.0560 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.4900 _refine_hist.d_res_low 19.6000 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 261 _refine_hist.number_atoms_total 2227 _refine_hist.pdbx_number_residues_total 234 _refine_hist.pdbx_B_iso_mean_ligand 52.66 _refine_hist.pdbx_B_iso_mean_solvent 43.96 _refine_hist.pdbx_number_atoms_protein 1934 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.019 0.019 2061 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.005 0.020 2073 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.851 1.995 2753 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.263 3.000 4813 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 4.039 5.000 256 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 32.280 25.196 102 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 12.945 15.000 451 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 11.660 15.000 13 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.099 0.200 301 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 0.020 2246 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.006 0.020 439 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 5.733 3.000 4134 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? 31.391 5.000 77 ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? 16.740 5.000 4285 ? r_sphericity_bonded ? ? # loop_ _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 'X-RAY DIFFRACTION' 1 1 'interatomic distance' A 6764 0.180 0.050 ? ? ? ? ? ? 2 'X-RAY DIFFRACTION' 1 2 'interatomic distance' B 6764 0.180 0.050 ? ? ? ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.4900 _refine_ls_shell.d_res_low 1.5280 _refine_ls_shell.number_reflns_all 2937 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 150 _refine_ls_shell.number_reflns_R_work 2787 _refine_ls_shell.percent_reflns_obs 96.7100 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2880 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2210 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 0 A GLY 1 . A SER 117 . A GLY 1 A SER 117 0 ? 1 2 0 B GLY 1 . B SER 117 . B GLY 1 B SER 117 0 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 5YNX _struct.title 'Structure of house dust mite allergen Der f 21 in PEG400' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5YNX _struct_keywords.text 'House dust mite (HDM), ALLERGEN' _struct_keywords.pdbx_keywords ALLERGEN # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 3 ? G N N 5 ? H N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B2GM84_DERFA _struct_ref.pdbx_db_accession B2GM84 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EDKWRNAFDHMLMEEFEEKMDQIEHGLLMLSEQYKELEKTKSKELKEQILRELTIAENYLRGALKFMQQEAKRTDLNMFE RYNFETAVSTIEILVKDLAELAKKVKAVKSDD ; _struct_ref.pdbx_align_begin 25 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5YNX A 8 ? 118 ? B2GM84 25 ? 136 ? 8 118 2 1 5YNX B 8 ? 118 ? B2GM84 25 ? 136 ? 8 118 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5YNX GLY A 1 ? UNP B2GM84 ? ? 'expression tag' 1 1 1 5YNX LEU A 2 ? UNP B2GM84 ? ? 'expression tag' 2 2 1 5YNX VAL A 3 ? UNP B2GM84 ? ? 'expression tag' 3 3 1 5YNX PRO A 4 ? UNP B2GM84 ? ? 'expression tag' 4 4 1 5YNX ARG A 5 ? UNP B2GM84 ? ? 'expression tag' 5 5 1 5YNX GLY A 6 ? UNP B2GM84 ? ? 'expression tag' 6 6 1 5YNX SER A 7 ? UNP B2GM84 ? ? 'expression tag' 7 7 2 5YNX GLY B 1 ? UNP B2GM84 ? ? 'expression tag' 1 8 2 5YNX LEU B 2 ? UNP B2GM84 ? ? 'expression tag' 2 9 2 5YNX VAL B 3 ? UNP B2GM84 ? ? 'expression tag' 3 10 2 5YNX PRO B 4 ? UNP B2GM84 ? ? 'expression tag' 4 11 2 5YNX ARG B 5 ? UNP B2GM84 ? ? 'expression tag' 5 12 2 5YNX GLY B 6 ? UNP B2GM84 ? ? 'expression tag' 6 13 2 5YNX SER B 7 ? UNP B2GM84 ? ? 'expression tag' 7 14 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4090 ? 1 MORE -28 ? 1 'SSA (A^2)' 12920 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 cross-linking 'Concentration dependent oligomer formation' 2 1 'gel filtration' 'Concentration dependent oligomer formation' 3 1 'light scattering' 'oncentration dependent oligomer formation' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 13 ? LYS A 48 ? ASN A 13 LYS A 48 1 ? 36 HELX_P HELX_P2 AA2 SER A 49 ? LYS A 79 ? SER A 49 LYS A 79 1 ? 31 HELX_P HELX_P3 AA3 ASN A 84 ? ALA A 114 ? ASN A 84 ALA A 114 1 ? 31 HELX_P HELX_P4 AA4 ASN B 13 ? GLU B 21 ? ASN B 13 GLU B 21 1 ? 9 HELX_P HELX_P5 AA5 GLU B 22 ? LYS B 48 ? GLU B 22 LYS B 48 1 ? 27 HELX_P HELX_P6 AA6 SER B 49 ? ALA B 78 ? SER B 49 ALA B 78 1 ? 30 HELX_P HELX_P7 AA7 ASN B 84 ? ALA B 114 ? ASN B 84 ALA B 114 1 ? 31 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OE2 _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 GLU _pdbx_validate_symm_contact.auth_seq_id_1 25 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 NZ _pdbx_validate_symm_contact.auth_asym_id_2 B _pdbx_validate_symm_contact.auth_comp_id_2 LYS _pdbx_validate_symm_contact.auth_seq_id_2 72 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_545 _pdbx_validate_symm_contact.dist 2.18 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CD A LYS 103 ? ? CE A LYS 103 ? ? NZ A LYS 103 ? ? 127.07 111.70 15.37 2.30 N 2 1 NE B ARG 80 ? ? CZ B ARG 80 ? ? NH2 B ARG 80 ? ? 116.71 120.30 -3.59 0.50 N # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 409 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id G _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -14.989 _pdbx_refine_tls.origin_y 1.324 _pdbx_refine_tls.origin_z 17.891 _pdbx_refine_tls.T[1][1] 0.0024 _pdbx_refine_tls.T[2][2] 0.0785 _pdbx_refine_tls.T[3][3] 0.0169 _pdbx_refine_tls.T[1][2] -0.0022 _pdbx_refine_tls.T[1][3] -0.0062 _pdbx_refine_tls.T[2][3] -0.0002 _pdbx_refine_tls.L[1][1] 0.1979 _pdbx_refine_tls.L[2][2] 0.0113 _pdbx_refine_tls.L[3][3] 0.0186 _pdbx_refine_tls.L[1][2] -0.0465 _pdbx_refine_tls.L[1][3] -0.0010 _pdbx_refine_tls.L[2][3] 0.0020 _pdbx_refine_tls.S[1][1] 0.0008 _pdbx_refine_tls.S[2][2] 0.0009 _pdbx_refine_tls.S[3][3] -0.0017 _pdbx_refine_tls.S[1][2] -0.0193 _pdbx_refine_tls.S[1][3] 0.0035 _pdbx_refine_tls.S[2][3] 0.0003 _pdbx_refine_tls.S[2][1] -0.0007 _pdbx_refine_tls.S[3][1] -0.0004 _pdbx_refine_tls.S[3][2] -0.0032 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 117 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 1 B 1 B 117 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 3 1 A 201 A 201 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 4 1 B 201 B 201 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 5 1 A 202 A 202 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 6 1 B 202 B 202 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 7 1 A 301 A 415 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 8 1 B 301 B 446 ? ? ? ? ? ? # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 413 ? 6.37 . 2 1 O ? A HOH 414 ? 6.53 . 3 1 O ? A HOH 415 ? 6.64 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 118 ? A ASP 118 2 1 Y 1 B ASP 118 ? B ASP 118 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 1PE OH2 O N N 1 1PE C12 C N N 2 1PE C22 C N N 3 1PE OH3 O N N 4 1PE C13 C N N 5 1PE C23 C N N 6 1PE OH4 O N N 7 1PE C14 C N N 8 1PE C24 C N N 9 1PE OH5 O N N 10 1PE C15 C N N 11 1PE C25 C N N 12 1PE OH6 O N N 13 1PE C16 C N N 14 1PE C26 C N N 15 1PE OH7 O N N 16 1PE HO2 H N N 17 1PE H121 H N N 18 1PE H122 H N N 19 1PE H221 H N N 20 1PE H222 H N N 21 1PE H131 H N N 22 1PE H132 H N N 23 1PE H231 H N N 24 1PE H232 H N N 25 1PE H141 H N N 26 1PE H142 H N N 27 1PE H241 H N N 28 1PE H242 H N N 29 1PE H151 H N N 30 1PE H152 H N N 31 1PE H251 H N N 32 1PE H252 H N N 33 1PE H161 H N N 34 1PE H162 H N N 35 1PE H261 H N N 36 1PE H262 H N N 37 1PE HO7 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 BME C1 C N N 112 BME C2 C N N 113 BME O1 O N N 114 BME S2 S N N 115 BME H11 H N N 116 BME H12 H N N 117 BME H21 H N N 118 BME H22 H N N 119 BME HO1 H N N 120 BME HS2 H N N 121 GLN N N N N 122 GLN CA C N S 123 GLN C C N N 124 GLN O O N N 125 GLN CB C N N 126 GLN CG C N N 127 GLN CD C N N 128 GLN OE1 O N N 129 GLN NE2 N N N 130 GLN OXT O N N 131 GLN H H N N 132 GLN H2 H N N 133 GLN HA H N N 134 GLN HB2 H N N 135 GLN HB3 H N N 136 GLN HG2 H N N 137 GLN HG3 H N N 138 GLN HE21 H N N 139 GLN HE22 H N N 140 GLN HXT H N N 141 GLU N N N N 142 GLU CA C N S 143 GLU C C N N 144 GLU O O N N 145 GLU CB C N N 146 GLU CG C N N 147 GLU CD C N N 148 GLU OE1 O N N 149 GLU OE2 O N N 150 GLU OXT O N N 151 GLU H H N N 152 GLU H2 H N N 153 GLU HA H N N 154 GLU HB2 H N N 155 GLU HB3 H N N 156 GLU HG2 H N N 157 GLU HG3 H N N 158 GLU HE2 H N N 159 GLU HXT H N N 160 GLY N N N N 161 GLY CA C N N 162 GLY C C N N 163 GLY O O N N 164 GLY OXT O N N 165 GLY H H N N 166 GLY H2 H N N 167 GLY HA2 H N N 168 GLY HA3 H N N 169 GLY HXT H N N 170 GOL C1 C N N 171 GOL O1 O N N 172 GOL C2 C N N 173 GOL O2 O N N 174 GOL C3 C N N 175 GOL O3 O N N 176 GOL H11 H N N 177 GOL H12 H N N 178 GOL HO1 H N N 179 GOL H2 H N N 180 GOL HO2 H N N 181 GOL H31 H N N 182 GOL H32 H N N 183 GOL HO3 H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 LEU N N N N 231 LEU CA C N S 232 LEU C C N N 233 LEU O O N N 234 LEU CB C N N 235 LEU CG C N N 236 LEU CD1 C N N 237 LEU CD2 C N N 238 LEU OXT O N N 239 LEU H H N N 240 LEU H2 H N N 241 LEU HA H N N 242 LEU HB2 H N N 243 LEU HB3 H N N 244 LEU HG H N N 245 LEU HD11 H N N 246 LEU HD12 H N N 247 LEU HD13 H N N 248 LEU HD21 H N N 249 LEU HD22 H N N 250 LEU HD23 H N N 251 LEU HXT H N N 252 LYS N N N N 253 LYS CA C N S 254 LYS C C N N 255 LYS O O N N 256 LYS CB C N N 257 LYS CG C N N 258 LYS CD C N N 259 LYS CE C N N 260 LYS NZ N N N 261 LYS OXT O N N 262 LYS H H N N 263 LYS H2 H N N 264 LYS HA H N N 265 LYS HB2 H N N 266 LYS HB3 H N N 267 LYS HG2 H N N 268 LYS HG3 H N N 269 LYS HD2 H N N 270 LYS HD3 H N N 271 LYS HE2 H N N 272 LYS HE3 H N N 273 LYS HZ1 H N N 274 LYS HZ2 H N N 275 LYS HZ3 H N N 276 LYS HXT H N N 277 MET N N N N 278 MET CA C N S 279 MET C C N N 280 MET O O N N 281 MET CB C N N 282 MET CG C N N 283 MET SD S N N 284 MET CE C N N 285 MET OXT O N N 286 MET H H N N 287 MET H2 H N N 288 MET HA H N N 289 MET HB2 H N N 290 MET HB3 H N N 291 MET HG2 H N N 292 MET HG3 H N N 293 MET HE1 H N N 294 MET HE2 H N N 295 MET HE3 H N N 296 MET HXT H N N 297 PHE N N N N 298 PHE CA C N S 299 PHE C C N N 300 PHE O O N N 301 PHE CB C N N 302 PHE CG C Y N 303 PHE CD1 C Y N 304 PHE CD2 C Y N 305 PHE CE1 C Y N 306 PHE CE2 C Y N 307 PHE CZ C Y N 308 PHE OXT O N N 309 PHE H H N N 310 PHE H2 H N N 311 PHE HA H N N 312 PHE HB2 H N N 313 PHE HB3 H N N 314 PHE HD1 H N N 315 PHE HD2 H N N 316 PHE HE1 H N N 317 PHE HE2 H N N 318 PHE HZ H N N 319 PHE HXT H N N 320 PRO N N N N 321 PRO CA C N S 322 PRO C C N N 323 PRO O O N N 324 PRO CB C N N 325 PRO CG C N N 326 PRO CD C N N 327 PRO OXT O N N 328 PRO H H N N 329 PRO HA H N N 330 PRO HB2 H N N 331 PRO HB3 H N N 332 PRO HG2 H N N 333 PRO HG3 H N N 334 PRO HD2 H N N 335 PRO HD3 H N N 336 PRO HXT H N N 337 SER N N N N 338 SER CA C N S 339 SER C C N N 340 SER O O N N 341 SER CB C N N 342 SER OG O N N 343 SER OXT O N N 344 SER H H N N 345 SER H2 H N N 346 SER HA H N N 347 SER HB2 H N N 348 SER HB3 H N N 349 SER HG H N N 350 SER HXT H N N 351 THR N N N N 352 THR CA C N S 353 THR C C N N 354 THR O O N N 355 THR CB C N R 356 THR OG1 O N N 357 THR CG2 C N N 358 THR OXT O N N 359 THR H H N N 360 THR H2 H N N 361 THR HA H N N 362 THR HB H N N 363 THR HG1 H N N 364 THR HG21 H N N 365 THR HG22 H N N 366 THR HG23 H N N 367 THR HXT H N N 368 TRP N N N N 369 TRP CA C N S 370 TRP C C N N 371 TRP O O N N 372 TRP CB C N N 373 TRP CG C Y N 374 TRP CD1 C Y N 375 TRP CD2 C Y N 376 TRP NE1 N Y N 377 TRP CE2 C Y N 378 TRP CE3 C Y N 379 TRP CZ2 C Y N 380 TRP CZ3 C Y N 381 TRP CH2 C Y N 382 TRP OXT O N N 383 TRP H H N N 384 TRP H2 H N N 385 TRP HA H N N 386 TRP HB2 H N N 387 TRP HB3 H N N 388 TRP HD1 H N N 389 TRP HE1 H N N 390 TRP HE3 H N N 391 TRP HZ2 H N N 392 TRP HZ3 H N N 393 TRP HH2 H N N 394 TRP HXT H N N 395 TYR N N N N 396 TYR CA C N S 397 TYR C C N N 398 TYR O O N N 399 TYR CB C N N 400 TYR CG C Y N 401 TYR CD1 C Y N 402 TYR CD2 C Y N 403 TYR CE1 C Y N 404 TYR CE2 C Y N 405 TYR CZ C Y N 406 TYR OH O N N 407 TYR OXT O N N 408 TYR H H N N 409 TYR H2 H N N 410 TYR HA H N N 411 TYR HB2 H N N 412 TYR HB3 H N N 413 TYR HD1 H N N 414 TYR HD2 H N N 415 TYR HE1 H N N 416 TYR HE2 H N N 417 TYR HH H N N 418 TYR HXT H N N 419 VAL N N N N 420 VAL CA C N S 421 VAL C C N N 422 VAL O O N N 423 VAL CB C N N 424 VAL CG1 C N N 425 VAL CG2 C N N 426 VAL OXT O N N 427 VAL H H N N 428 VAL H2 H N N 429 VAL HA H N N 430 VAL HB H N N 431 VAL HG11 H N N 432 VAL HG12 H N N 433 VAL HG13 H N N 434 VAL HG21 H N N 435 VAL HG22 H N N 436 VAL HG23 H N N 437 VAL HXT H N N 438 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1PE OH2 C12 sing N N 1 1PE OH2 HO2 sing N N 2 1PE C12 C22 sing N N 3 1PE C12 H121 sing N N 4 1PE C12 H122 sing N N 5 1PE C22 OH3 sing N N 6 1PE C22 H221 sing N N 7 1PE C22 H222 sing N N 8 1PE OH3 C23 sing N N 9 1PE C13 C23 sing N N 10 1PE C13 OH4 sing N N 11 1PE C13 H131 sing N N 12 1PE C13 H132 sing N N 13 1PE C23 H231 sing N N 14 1PE C23 H232 sing N N 15 1PE OH4 C24 sing N N 16 1PE C14 C24 sing N N 17 1PE C14 OH5 sing N N 18 1PE C14 H141 sing N N 19 1PE C14 H142 sing N N 20 1PE C24 H241 sing N N 21 1PE C24 H242 sing N N 22 1PE OH5 C25 sing N N 23 1PE C15 C25 sing N N 24 1PE C15 OH6 sing N N 25 1PE C15 H151 sing N N 26 1PE C15 H152 sing N N 27 1PE C25 H251 sing N N 28 1PE C25 H252 sing N N 29 1PE OH6 C26 sing N N 30 1PE C16 C26 sing N N 31 1PE C16 OH7 sing N N 32 1PE C16 H161 sing N N 33 1PE C16 H162 sing N N 34 1PE C26 H261 sing N N 35 1PE C26 H262 sing N N 36 1PE OH7 HO7 sing N N 37 ALA N CA sing N N 38 ALA N H sing N N 39 ALA N H2 sing N N 40 ALA CA C sing N N 41 ALA CA CB sing N N 42 ALA CA HA sing N N 43 ALA C O doub N N 44 ALA C OXT sing N N 45 ALA CB HB1 sing N N 46 ALA CB HB2 sing N N 47 ALA CB HB3 sing N N 48 ALA OXT HXT sing N N 49 ARG N CA sing N N 50 ARG N H sing N N 51 ARG N H2 sing N N 52 ARG CA C sing N N 53 ARG CA CB sing N N 54 ARG CA HA sing N N 55 ARG C O doub N N 56 ARG C OXT sing N N 57 ARG CB CG sing N N 58 ARG CB HB2 sing N N 59 ARG CB HB3 sing N N 60 ARG CG CD sing N N 61 ARG CG HG2 sing N N 62 ARG CG HG3 sing N N 63 ARG CD NE sing N N 64 ARG CD HD2 sing N N 65 ARG CD HD3 sing N N 66 ARG NE CZ sing N N 67 ARG NE HE sing N N 68 ARG CZ NH1 sing N N 69 ARG CZ NH2 doub N N 70 ARG NH1 HH11 sing N N 71 ARG NH1 HH12 sing N N 72 ARG NH2 HH21 sing N N 73 ARG NH2 HH22 sing N N 74 ARG OXT HXT sing N N 75 ASN N CA sing N N 76 ASN N H sing N N 77 ASN N H2 sing N N 78 ASN CA C sing N N 79 ASN CA CB sing N N 80 ASN CA HA sing N N 81 ASN C O doub N N 82 ASN C OXT sing N N 83 ASN CB CG sing N N 84 ASN CB HB2 sing N N 85 ASN CB HB3 sing N N 86 ASN CG OD1 doub N N 87 ASN CG ND2 sing N N 88 ASN ND2 HD21 sing N N 89 ASN ND2 HD22 sing N N 90 ASN OXT HXT sing N N 91 ASP N CA sing N N 92 ASP N H sing N N 93 ASP N H2 sing N N 94 ASP CA C sing N N 95 ASP CA CB sing N N 96 ASP CA HA sing N N 97 ASP C O doub N N 98 ASP C OXT sing N N 99 ASP CB CG sing N N 100 ASP CB HB2 sing N N 101 ASP CB HB3 sing N N 102 ASP CG OD1 doub N N 103 ASP CG OD2 sing N N 104 ASP OD2 HD2 sing N N 105 ASP OXT HXT sing N N 106 BME C1 C2 sing N N 107 BME C1 O1 sing N N 108 BME C1 H11 sing N N 109 BME C1 H12 sing N N 110 BME C2 S2 sing N N 111 BME C2 H21 sing N N 112 BME C2 H22 sing N N 113 BME O1 HO1 sing N N 114 BME S2 HS2 sing N N 115 GLN N CA sing N N 116 GLN N H sing N N 117 GLN N H2 sing N N 118 GLN CA C sing N N 119 GLN CA CB sing N N 120 GLN CA HA sing N N 121 GLN C O doub N N 122 GLN C OXT sing N N 123 GLN CB CG sing N N 124 GLN CB HB2 sing N N 125 GLN CB HB3 sing N N 126 GLN CG CD sing N N 127 GLN CG HG2 sing N N 128 GLN CG HG3 sing N N 129 GLN CD OE1 doub N N 130 GLN CD NE2 sing N N 131 GLN NE2 HE21 sing N N 132 GLN NE2 HE22 sing N N 133 GLN OXT HXT sing N N 134 GLU N CA sing N N 135 GLU N H sing N N 136 GLU N H2 sing N N 137 GLU CA C sing N N 138 GLU CA CB sing N N 139 GLU CA HA sing N N 140 GLU C O doub N N 141 GLU C OXT sing N N 142 GLU CB CG sing N N 143 GLU CB HB2 sing N N 144 GLU CB HB3 sing N N 145 GLU CG CD sing N N 146 GLU CG HG2 sing N N 147 GLU CG HG3 sing N N 148 GLU CD OE1 doub N N 149 GLU CD OE2 sing N N 150 GLU OE2 HE2 sing N N 151 GLU OXT HXT sing N N 152 GLY N CA sing N N 153 GLY N H sing N N 154 GLY N H2 sing N N 155 GLY CA C sing N N 156 GLY CA HA2 sing N N 157 GLY CA HA3 sing N N 158 GLY C O doub N N 159 GLY C OXT sing N N 160 GLY OXT HXT sing N N 161 GOL C1 O1 sing N N 162 GOL C1 C2 sing N N 163 GOL C1 H11 sing N N 164 GOL C1 H12 sing N N 165 GOL O1 HO1 sing N N 166 GOL C2 O2 sing N N 167 GOL C2 C3 sing N N 168 GOL C2 H2 sing N N 169 GOL O2 HO2 sing N N 170 GOL C3 O3 sing N N 171 GOL C3 H31 sing N N 172 GOL C3 H32 sing N N 173 GOL O3 HO3 sing N N 174 HIS N CA sing N N 175 HIS N H sing N N 176 HIS N H2 sing N N 177 HIS CA C sing N N 178 HIS CA CB sing N N 179 HIS CA HA sing N N 180 HIS C O doub N N 181 HIS C OXT sing N N 182 HIS CB CG sing N N 183 HIS CB HB2 sing N N 184 HIS CB HB3 sing N N 185 HIS CG ND1 sing Y N 186 HIS CG CD2 doub Y N 187 HIS ND1 CE1 doub Y N 188 HIS ND1 HD1 sing N N 189 HIS CD2 NE2 sing Y N 190 HIS CD2 HD2 sing N N 191 HIS CE1 NE2 sing Y N 192 HIS CE1 HE1 sing N N 193 HIS NE2 HE2 sing N N 194 HIS OXT HXT sing N N 195 HOH O H1 sing N N 196 HOH O H2 sing N N 197 ILE N CA sing N N 198 ILE N H sing N N 199 ILE N H2 sing N N 200 ILE CA C sing N N 201 ILE CA CB sing N N 202 ILE CA HA sing N N 203 ILE C O doub N N 204 ILE C OXT sing N N 205 ILE CB CG1 sing N N 206 ILE CB CG2 sing N N 207 ILE CB HB sing N N 208 ILE CG1 CD1 sing N N 209 ILE CG1 HG12 sing N N 210 ILE CG1 HG13 sing N N 211 ILE CG2 HG21 sing N N 212 ILE CG2 HG22 sing N N 213 ILE CG2 HG23 sing N N 214 ILE CD1 HD11 sing N N 215 ILE CD1 HD12 sing N N 216 ILE CD1 HD13 sing N N 217 ILE OXT HXT sing N N 218 LEU N CA sing N N 219 LEU N H sing N N 220 LEU N H2 sing N N 221 LEU CA C sing N N 222 LEU CA CB sing N N 223 LEU CA HA sing N N 224 LEU C O doub N N 225 LEU C OXT sing N N 226 LEU CB CG sing N N 227 LEU CB HB2 sing N N 228 LEU CB HB3 sing N N 229 LEU CG CD1 sing N N 230 LEU CG CD2 sing N N 231 LEU CG HG sing N N 232 LEU CD1 HD11 sing N N 233 LEU CD1 HD12 sing N N 234 LEU CD1 HD13 sing N N 235 LEU CD2 HD21 sing N N 236 LEU CD2 HD22 sing N N 237 LEU CD2 HD23 sing N N 238 LEU OXT HXT sing N N 239 LYS N CA sing N N 240 LYS N H sing N N 241 LYS N H2 sing N N 242 LYS CA C sing N N 243 LYS CA CB sing N N 244 LYS CA HA sing N N 245 LYS C O doub N N 246 LYS C OXT sing N N 247 LYS CB CG sing N N 248 LYS CB HB2 sing N N 249 LYS CB HB3 sing N N 250 LYS CG CD sing N N 251 LYS CG HG2 sing N N 252 LYS CG HG3 sing N N 253 LYS CD CE sing N N 254 LYS CD HD2 sing N N 255 LYS CD HD3 sing N N 256 LYS CE NZ sing N N 257 LYS CE HE2 sing N N 258 LYS CE HE3 sing N N 259 LYS NZ HZ1 sing N N 260 LYS NZ HZ2 sing N N 261 LYS NZ HZ3 sing N N 262 LYS OXT HXT sing N N 263 MET N CA sing N N 264 MET N H sing N N 265 MET N H2 sing N N 266 MET CA C sing N N 267 MET CA CB sing N N 268 MET CA HA sing N N 269 MET C O doub N N 270 MET C OXT sing N N 271 MET CB CG sing N N 272 MET CB HB2 sing N N 273 MET CB HB3 sing N N 274 MET CG SD sing N N 275 MET CG HG2 sing N N 276 MET CG HG3 sing N N 277 MET SD CE sing N N 278 MET CE HE1 sing N N 279 MET CE HE2 sing N N 280 MET CE HE3 sing N N 281 MET OXT HXT sing N N 282 PHE N CA sing N N 283 PHE N H sing N N 284 PHE N H2 sing N N 285 PHE CA C sing N N 286 PHE CA CB sing N N 287 PHE CA HA sing N N 288 PHE C O doub N N 289 PHE C OXT sing N N 290 PHE CB CG sing N N 291 PHE CB HB2 sing N N 292 PHE CB HB3 sing N N 293 PHE CG CD1 doub Y N 294 PHE CG CD2 sing Y N 295 PHE CD1 CE1 sing Y N 296 PHE CD1 HD1 sing N N 297 PHE CD2 CE2 doub Y N 298 PHE CD2 HD2 sing N N 299 PHE CE1 CZ doub Y N 300 PHE CE1 HE1 sing N N 301 PHE CE2 CZ sing Y N 302 PHE CE2 HE2 sing N N 303 PHE CZ HZ sing N N 304 PHE OXT HXT sing N N 305 PRO N CA sing N N 306 PRO N CD sing N N 307 PRO N H sing N N 308 PRO CA C sing N N 309 PRO CA CB sing N N 310 PRO CA HA sing N N 311 PRO C O doub N N 312 PRO C OXT sing N N 313 PRO CB CG sing N N 314 PRO CB HB2 sing N N 315 PRO CB HB3 sing N N 316 PRO CG CD sing N N 317 PRO CG HG2 sing N N 318 PRO CG HG3 sing N N 319 PRO CD HD2 sing N N 320 PRO CD HD3 sing N N 321 PRO OXT HXT sing N N 322 SER N CA sing N N 323 SER N H sing N N 324 SER N H2 sing N N 325 SER CA C sing N N 326 SER CA CB sing N N 327 SER CA HA sing N N 328 SER C O doub N N 329 SER C OXT sing N N 330 SER CB OG sing N N 331 SER CB HB2 sing N N 332 SER CB HB3 sing N N 333 SER OG HG sing N N 334 SER OXT HXT sing N N 335 THR N CA sing N N 336 THR N H sing N N 337 THR N H2 sing N N 338 THR CA C sing N N 339 THR CA CB sing N N 340 THR CA HA sing N N 341 THR C O doub N N 342 THR C OXT sing N N 343 THR CB OG1 sing N N 344 THR CB CG2 sing N N 345 THR CB HB sing N N 346 THR OG1 HG1 sing N N 347 THR CG2 HG21 sing N N 348 THR CG2 HG22 sing N N 349 THR CG2 HG23 sing N N 350 THR OXT HXT sing N N 351 TRP N CA sing N N 352 TRP N H sing N N 353 TRP N H2 sing N N 354 TRP CA C sing N N 355 TRP CA CB sing N N 356 TRP CA HA sing N N 357 TRP C O doub N N 358 TRP C OXT sing N N 359 TRP CB CG sing N N 360 TRP CB HB2 sing N N 361 TRP CB HB3 sing N N 362 TRP CG CD1 doub Y N 363 TRP CG CD2 sing Y N 364 TRP CD1 NE1 sing Y N 365 TRP CD1 HD1 sing N N 366 TRP CD2 CE2 doub Y N 367 TRP CD2 CE3 sing Y N 368 TRP NE1 CE2 sing Y N 369 TRP NE1 HE1 sing N N 370 TRP CE2 CZ2 sing Y N 371 TRP CE3 CZ3 doub Y N 372 TRP CE3 HE3 sing N N 373 TRP CZ2 CH2 doub Y N 374 TRP CZ2 HZ2 sing N N 375 TRP CZ3 CH2 sing Y N 376 TRP CZ3 HZ3 sing N N 377 TRP CH2 HH2 sing N N 378 TRP OXT HXT sing N N 379 TYR N CA sing N N 380 TYR N H sing N N 381 TYR N H2 sing N N 382 TYR CA C sing N N 383 TYR CA CB sing N N 384 TYR CA HA sing N N 385 TYR C O doub N N 386 TYR C OXT sing N N 387 TYR CB CG sing N N 388 TYR CB HB2 sing N N 389 TYR CB HB3 sing N N 390 TYR CG CD1 doub Y N 391 TYR CG CD2 sing Y N 392 TYR CD1 CE1 sing Y N 393 TYR CD1 HD1 sing N N 394 TYR CD2 CE2 doub Y N 395 TYR CD2 HD2 sing N N 396 TYR CE1 CZ doub Y N 397 TYR CE1 HE1 sing N N 398 TYR CE2 CZ sing Y N 399 TYR CE2 HE2 sing N N 400 TYR CZ OH sing N N 401 TYR OH HH sing N N 402 TYR OXT HXT sing N N 403 VAL N CA sing N N 404 VAL N H sing N N 405 VAL N H2 sing N N 406 VAL CA C sing N N 407 VAL CA CB sing N N 408 VAL CA HA sing N N 409 VAL C O doub N N 410 VAL C OXT sing N N 411 VAL CB CG1 sing N N 412 VAL CB CG2 sing N N 413 VAL CB HB sing N N 414 VAL CG1 HG11 sing N N 415 VAL CG1 HG12 sing N N 416 VAL CG1 HG13 sing N N 417 VAL CG2 HG21 sing N N 418 VAL CG2 HG22 sing N N 419 VAL CG2 HG23 sing N N 420 VAL OXT HXT sing N N 421 # _pdbx_audit_support.funding_organization 'Other government' _pdbx_audit_support.country Malaysia _pdbx_audit_support.grant_number GUP-2014-010 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 5YNX _atom_sites.fract_transf_matrix[1][1] 0.008100 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005850 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.036083 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013668 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_