data_5YY9 # _entry.id 5YY9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5YY9 pdb_00005yy9 10.2210/pdb5yy9/pdb WWPDB D_1300006090 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5YY9 _pdbx_database_status.recvd_initial_deposition_date 2017-12-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kori, S.' 1 ? 'Defossez, P.A.' 2 ? 'Arita, K.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Structure _citation.journal_id_ASTM STRUE6 _citation.journal_id_CSD 2005 _citation.journal_id_ISSN 1878-4186 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 27 _citation.language ? _citation.page_first 485 _citation.page_last ? _citation.title ;Structure of the UHRF1 Tandem Tudor Domain Bound to a Methylated Non-histone Protein, LIG1, Reveals Rules for Binding and Regulation. ; _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.str.2018.11.012 _citation.pdbx_database_id_PubMed 30639225 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kori, S.' 1 ? primary 'Ferry, L.' 2 ? primary 'Matano, S.' 3 ? primary 'Jimenji, T.' 4 ? primary 'Kodera, N.' 5 ? primary 'Tsusaka, T.' 6 ? primary 'Matsumura, R.' 7 ? primary 'Oda, T.' 8 ? primary 'Sato, M.' 9 ? primary 'Dohmae, N.' 10 ? primary 'Ando, T.' 11 ? primary 'Shinkai, Y.' 12 ? primary 'Defossez, P.A.' 13 ? primary 'Arita, K.' 14 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5YY9 _cell.details ? _cell.formula_units_Z ? _cell.length_a 27.105 _cell.length_a_esd ? _cell.length_b 97.349 _cell.length_b_esd ? _cell.length_c 132.529 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5YY9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'E3 ubiquitin-protein ligase UHRF1' 18162.207 2 2.3.2.27 ? 'Tandem Tudor Domain' ? 2 polymer syn 'Ligase 1' 1640.072 2 ? ? ? ? 3 water nat water 18.015 24 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Inverted CCAAT box-binding protein of 90 kDa,Nuclear protein 95,Nuclear zinc finger protein Np95,hNp95,RING finger protein 106,RING-type E3 ubiquitin transferase UHRF1,Transcription factor ICBP90,Ubiquitin-like PHD and RING finger domain-containing protein 1,hUHRF1,Ubiquitin-like-containing PHD and RING finger domains protein 1 ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;DEDMWDETELGLYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRPALEEDVIYHVKYDDYPENGVVQMNSRDVRARARTI IKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGE ; ;DEDMWDETELGLYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRPALEEDVIYHVKYDDYPENGVVQMNSRDVRARARTI IKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGE ; A,B ? 2 'polypeptide(L)' no yes 'IPKRRTAR(M3L)QLPK' IPKRRTARKQLPK C,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 GLU n 1 3 ASP n 1 4 MET n 1 5 TRP n 1 6 ASP n 1 7 GLU n 1 8 THR n 1 9 GLU n 1 10 LEU n 1 11 GLY n 1 12 LEU n 1 13 TYR n 1 14 LYS n 1 15 VAL n 1 16 ASN n 1 17 GLU n 1 18 TYR n 1 19 VAL n 1 20 ASP n 1 21 ALA n 1 22 ARG n 1 23 ASP n 1 24 THR n 1 25 ASN n 1 26 MET n 1 27 GLY n 1 28 ALA n 1 29 TRP n 1 30 PHE n 1 31 GLU n 1 32 ALA n 1 33 GLN n 1 34 VAL n 1 35 VAL n 1 36 ARG n 1 37 VAL n 1 38 THR n 1 39 ARG n 1 40 LYS n 1 41 ALA n 1 42 PRO n 1 43 SER n 1 44 ARG n 1 45 PRO n 1 46 ALA n 1 47 LEU n 1 48 GLU n 1 49 GLU n 1 50 ASP n 1 51 VAL n 1 52 ILE n 1 53 TYR n 1 54 HIS n 1 55 VAL n 1 56 LYS n 1 57 TYR n 1 58 ASP n 1 59 ASP n 1 60 TYR n 1 61 PRO n 1 62 GLU n 1 63 ASN n 1 64 GLY n 1 65 VAL n 1 66 VAL n 1 67 GLN n 1 68 MET n 1 69 ASN n 1 70 SER n 1 71 ARG n 1 72 ASP n 1 73 VAL n 1 74 ARG n 1 75 ALA n 1 76 ARG n 1 77 ALA n 1 78 ARG n 1 79 THR n 1 80 ILE n 1 81 ILE n 1 82 LYS n 1 83 TRP n 1 84 GLN n 1 85 ASP n 1 86 LEU n 1 87 GLU n 1 88 VAL n 1 89 GLY n 1 90 GLN n 1 91 VAL n 1 92 VAL n 1 93 MET n 1 94 LEU n 1 95 ASN n 1 96 TYR n 1 97 ASN n 1 98 PRO n 1 99 ASP n 1 100 ASN n 1 101 PRO n 1 102 LYS n 1 103 GLU n 1 104 ARG n 1 105 GLY n 1 106 PHE n 1 107 TRP n 1 108 TYR n 1 109 ASP n 1 110 ALA n 1 111 GLU n 1 112 ILE n 1 113 SER n 1 114 ARG n 1 115 LYS n 1 116 ARG n 1 117 GLU n 1 118 THR n 1 119 ARG n 1 120 THR n 1 121 ALA n 1 122 ARG n 1 123 GLU n 1 124 LEU n 1 125 TYR n 1 126 ALA n 1 127 ASN n 1 128 VAL n 1 129 VAL n 1 130 LEU n 1 131 GLY n 1 132 ASP n 1 133 ASP n 1 134 SER n 1 135 LEU n 1 136 ASN n 1 137 ASP n 1 138 CYS n 1 139 ARG n 1 140 ILE n 1 141 ILE n 1 142 PHE n 1 143 VAL n 1 144 ASP n 1 145 GLU n 1 146 VAL n 1 147 PHE n 1 148 LYS n 1 149 ILE n 1 150 GLU n 1 151 ARG n 1 152 PRO n 1 153 GLY n 1 154 GLU n 2 1 ILE n 2 2 PRO n 2 3 LYS n 2 4 ARG n 2 5 ARG n 2 6 THR n 2 7 ALA n 2 8 ARG n 2 9 M3L n 2 10 GLN n 2 11 LEU n 2 12 PRO n 2 13 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 154 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'UHRF1, ICBP90, NP95, RNF106' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta2(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 13 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP UHRF1_HUMAN Q96T88 ? 1 ;DEDMWDETELGLYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRDEPCSSTSRPALEEDVIYHVKYDDYPENGVVQMNSR DVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIER PGE ; 123 2 PDB 5YY9 5YY9 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5YY9 A 1 ? 154 ? Q96T88 123 ? 285 ? 123 285 2 1 5YY9 B 1 ? 154 ? Q96T88 123 ? 285 ? 123 285 3 2 5YY9 C 1 ? 13 ? 5YY9 118 ? 130 ? 118 130 4 2 5YY9 D 1 ? 13 ? 5YY9 118 ? 130 ? 118 130 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5YY9 ? A ? ? UNP Q96T88 SER 167 deletion ? 1 1 5YY9 ? A ? ? UNP Q96T88 ARG 168 deletion ? 2 1 5YY9 ? A ? ? UNP Q96T88 ASP 169 deletion ? 3 1 5YY9 ? A ? ? UNP Q96T88 GLU 170 deletion ? 4 1 5YY9 ? A ? ? UNP Q96T88 PRO 171 deletion ? 5 1 5YY9 ? A ? ? UNP Q96T88 CYS 172 deletion ? 6 1 5YY9 ? A ? ? UNP Q96T88 SER 173 deletion ? 7 1 5YY9 ? A ? ? UNP Q96T88 SER 174 deletion ? 8 1 5YY9 ? A ? ? UNP Q96T88 THR 175 deletion ? 9 2 5YY9 ? B ? ? UNP Q96T88 SER 167 deletion ? 10 2 5YY9 ? B ? ? UNP Q96T88 ARG 168 deletion ? 11 2 5YY9 ? B ? ? UNP Q96T88 ASP 169 deletion ? 12 2 5YY9 ? B ? ? UNP Q96T88 GLU 170 deletion ? 13 2 5YY9 ? B ? ? UNP Q96T88 PRO 171 deletion ? 14 2 5YY9 ? B ? ? UNP Q96T88 CYS 172 deletion ? 15 2 5YY9 ? B ? ? UNP Q96T88 SER 173 deletion ? 16 2 5YY9 ? B ? ? UNP Q96T88 SER 174 deletion ? 17 2 5YY9 ? B ? ? UNP Q96T88 THR 175 deletion ? 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 M3L 'L-peptide linking' n N-TRIMETHYLLYSINE ? 'C9 H21 N2 O2 1' 189.275 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5YY9 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.10 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.32 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '00 mM Tris-HCl (pH 7.0), 200 mM tri-potassium phosphate and 20% (w/v) PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-05-01 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-17A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.98 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL-17A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5YY9 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.65 _reflns.d_resolution_low 48.67 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 40019 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.8 _reflns.pdbx_Rmerge_I_obs 0.12 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.99 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.65 _reflns_shell.d_res_low 2.78 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.4 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 95.4 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.70 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.8 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.95 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5YY9 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.653 _refine.ls_d_res_low 40.228 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10370 _refine.ls_number_reflns_R_free 1034 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 95.76 _refine.ls_percent_reflns_R_free 9.97 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2367 _refine.ls_R_factor_R_free 0.2877 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2309 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3DB3 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 30.67 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.35 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2390 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 24 _refine_hist.number_atoms_total 2414 _refine_hist.d_res_high 2.653 _refine_hist.d_res_low 40.228 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? 2435 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.812 ? 3304 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 21.651 ? 1464 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.053 ? 360 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 429 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.6535 2.7934 . . 134 1269 94.00 . . . 0.3801 . 0.3068 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7934 2.9683 . . 156 1327 98.00 . . . 0.3926 . 0.2999 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9683 3.1974 . . 148 1315 98.00 . . . 0.3344 . 0.2770 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1974 3.5190 . . 143 1330 96.00 . . . 0.2878 . 0.2423 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5190 4.0278 . . 162 1334 97.00 . . . 0.2399 . 0.2217 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.0278 5.0730 . . 133 1344 95.00 . . . 0.2430 . 0.1776 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.0730 40.2326 . . 158 1417 94.00 . . . 0.3001 . 0.2233 . . . . . . . . . . # _struct.entry_id 5YY9 _struct.title 'Crystal structure of Tandem Tudor Domain of human UHRF1 in complex with LIG1-K126me3' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5YY9 _struct_keywords.text 'Maintenance of DNA methylation, TRANSFERASE' _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 69 ? ARG A 71 ? ASN A 200 ARG A 202 5 ? 3 HELX_P HELX_P2 AA2 LYS A 82 ? LEU A 86 ? LYS A 213 LEU A 217 5 ? 5 HELX_P HELX_P3 AA3 TYR B 60 ? GLY B 64 ? TYR B 191 GLY B 195 5 ? 5 HELX_P HELX_P4 AA4 LYS B 82 ? LEU B 86 ? LYS B 213 LEU B 217 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C ARG 8 C ? ? ? 1_555 C M3L 9 N ? ? C ARG 125 C M3L 126 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? C M3L 9 C ? ? ? 1_555 C GLN 10 N ? ? C M3L 126 C GLN 127 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale3 covale both ? D ARG 8 C ? ? ? 1_555 D M3L 9 N ? ? D ARG 125 D M3L 126 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale4 covale both ? D M3L 9 C ? ? ? 1_555 D GLN 10 N ? ? D M3L 126 D GLN 127 1_555 ? ? ? ? ? ? ? 1.327 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASN 16 A . ? ASN 138 A GLU 17 A ? GLU 139 A 1 15.42 2 ARG 151 A . ? ARG 282 A PRO 152 A ? PRO 283 A 1 10.37 3 PRO 152 B . ? PRO 283 B GLY 153 B ? GLY 284 B 1 0.00 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 4 ? AA3 ? 5 ? AA4 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 60 ? MET A 68 ? TYR A 191 MET A 199 AA1 2 ASP A 50 ? TYR A 57 ? ASP A 181 TYR A 188 AA1 3 TRP A 29 ? LYS A 40 ? TRP A 151 LYS A 162 AA1 4 VAL A 19 ? ARG A 22 ? VAL A 141 ARG A 144 AA1 5 VAL A 73 ? ALA A 75 ? VAL A 204 ALA A 206 AA2 1 VAL A 91 ? TYR A 96 ? VAL A 222 TYR A 227 AA2 2 PHE A 106 ? GLU A 117 ? PHE A 237 GLU A 248 AA2 3 ARG A 122 ? VAL A 129 ? ARG A 253 VAL A 260 AA2 4 SER A 134 ? ILE A 140 ? SER A 265 ILE A 271 AA3 1 VAL B 66 ? MET B 68 ? VAL B 197 MET B 199 AA3 2 ILE B 52 ? TYR B 57 ? ILE B 183 TYR B 188 AA3 3 TRP B 29 ? THR B 38 ? TRP B 151 THR B 160 AA3 4 TYR B 18 ? ARG B 22 ? TYR B 140 ARG B 144 AA3 5 VAL B 73 ? ALA B 75 ? VAL B 204 ALA B 206 AA4 1 LEU B 135 ? ILE B 140 ? LEU B 266 ILE B 271 AA4 2 ARG B 122 ? VAL B 128 ? ARG B 253 VAL B 259 AA4 3 PHE B 106 ? GLU B 117 ? PHE B 237 GLU B 248 AA4 4 VAL B 91 ? TYR B 96 ? VAL B 222 TYR B 227 AA4 5 PHE B 147 ? LYS B 148 ? PHE B 278 LYS B 279 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O MET A 68 ? O MET A 199 N TYR A 53 ? N TYR A 184 AA1 2 3 O HIS A 54 ? O HIS A 185 N VAL A 35 ? N VAL A 157 AA1 3 4 O PHE A 30 ? O PHE A 152 N ALA A 21 ? N ALA A 143 AA1 4 5 N ASP A 20 ? N ASP A 142 O ARG A 74 ? O ARG A 205 AA2 1 2 N VAL A 92 ? N VAL A 223 O ALA A 110 ? O ALA A 241 AA2 2 3 N ARG A 114 ? N ARG A 245 O TYR A 125 ? O TYR A 256 AA2 3 4 N LEU A 124 ? N LEU A 255 O ILE A 140 ? O ILE A 271 AA3 1 2 O VAL B 66 ? O VAL B 197 N VAL B 55 ? N VAL B 186 AA3 2 3 O HIS B 54 ? O HIS B 185 N ARG B 36 ? N ARG B 158 AA3 3 4 O ALA B 32 ? O ALA B 154 N VAL B 19 ? N VAL B 141 AA3 4 5 N ASP B 20 ? N ASP B 142 O ARG B 74 ? O ARG B 205 AA4 1 2 O ILE B 140 ? O ILE B 271 N LEU B 124 ? N LEU B 255 AA4 2 3 O TYR B 125 ? O TYR B 256 N ARG B 114 ? N ARG B 245 AA4 3 4 O ALA B 110 ? O ALA B 241 N VAL B 92 ? N VAL B 223 AA4 4 5 N MET B 93 ? N MET B 224 O PHE B 147 ? O PHE B 278 # _atom_sites.entry_id 5YY9 _atom_sites.fract_transf_matrix[1][1] 0.036894 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010272 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007546 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 123 ? ? ? A . n A 1 2 GLU 2 124 ? ? ? A . n A 1 3 ASP 3 125 ? ? ? A . n A 1 4 MET 4 126 ? ? ? A . n A 1 5 TRP 5 127 ? ? ? A . n A 1 6 ASP 6 128 ? ? ? A . n A 1 7 GLU 7 129 ? ? ? A . n A 1 8 THR 8 130 ? ? ? A . n A 1 9 GLU 9 131 ? ? ? A . n A 1 10 LEU 10 132 ? ? ? A . n A 1 11 GLY 11 133 ? ? ? A . n A 1 12 LEU 12 134 ? ? ? A . n A 1 13 TYR 13 135 ? ? ? A . n A 1 14 LYS 14 136 ? ? ? A . n A 1 15 VAL 15 137 137 VAL VAL A . n A 1 16 ASN 16 138 138 ASN ASN A . n A 1 17 GLU 17 139 139 GLU GLU A . n A 1 18 TYR 18 140 140 TYR TYR A . n A 1 19 VAL 19 141 141 VAL VAL A . n A 1 20 ASP 20 142 142 ASP ASP A . n A 1 21 ALA 21 143 143 ALA ALA A . n A 1 22 ARG 22 144 144 ARG ARG A . n A 1 23 ASP 23 145 145 ASP ASP A . n A 1 24 THR 24 146 146 THR THR A . n A 1 25 ASN 25 147 147 ASN ASN A . n A 1 26 MET 26 148 148 MET MET A . n A 1 27 GLY 27 149 149 GLY GLY A . n A 1 28 ALA 28 150 150 ALA ALA A . n A 1 29 TRP 29 151 151 TRP TRP A . n A 1 30 PHE 30 152 152 PHE PHE A . n A 1 31 GLU 31 153 153 GLU GLU A . n A 1 32 ALA 32 154 154 ALA ALA A . n A 1 33 GLN 33 155 155 GLN GLN A . n A 1 34 VAL 34 156 156 VAL VAL A . n A 1 35 VAL 35 157 157 VAL VAL A . n A 1 36 ARG 36 158 158 ARG ARG A . n A 1 37 VAL 37 159 159 VAL VAL A . n A 1 38 THR 38 160 160 THR THR A . n A 1 39 ARG 39 161 161 ARG ARG A . n A 1 40 LYS 40 162 162 LYS LYS A . n A 1 41 ALA 41 163 163 ALA ALA A . n A 1 42 PRO 42 164 164 PRO PRO A . n A 1 43 SER 43 165 165 SER SER A . n A 1 44 ARG 44 166 166 ARG ARG A . n A 1 45 PRO 45 176 176 PRO PRO A . n A 1 46 ALA 46 177 177 ALA ALA A . n A 1 47 LEU 47 178 178 LEU LEU A . n A 1 48 GLU 48 179 179 GLU GLU A . n A 1 49 GLU 49 180 180 GLU GLU A . n A 1 50 ASP 50 181 181 ASP ASP A . n A 1 51 VAL 51 182 182 VAL VAL A . n A 1 52 ILE 52 183 183 ILE ILE A . n A 1 53 TYR 53 184 184 TYR TYR A . n A 1 54 HIS 54 185 185 HIS HIS A . n A 1 55 VAL 55 186 186 VAL VAL A . n A 1 56 LYS 56 187 187 LYS LYS A . n A 1 57 TYR 57 188 188 TYR TYR A . n A 1 58 ASP 58 189 189 ASP ASP A . n A 1 59 ASP 59 190 190 ASP ASP A . n A 1 60 TYR 60 191 191 TYR TYR A . n A 1 61 PRO 61 192 192 PRO PRO A . n A 1 62 GLU 62 193 193 GLU GLU A . n A 1 63 ASN 63 194 194 ASN ASN A . n A 1 64 GLY 64 195 195 GLY GLY A . n A 1 65 VAL 65 196 196 VAL VAL A . n A 1 66 VAL 66 197 197 VAL VAL A . n A 1 67 GLN 67 198 198 GLN GLN A . n A 1 68 MET 68 199 199 MET MET A . n A 1 69 ASN 69 200 200 ASN ASN A . n A 1 70 SER 70 201 201 SER SER A . n A 1 71 ARG 71 202 202 ARG ARG A . n A 1 72 ASP 72 203 203 ASP ASP A . n A 1 73 VAL 73 204 204 VAL VAL A . n A 1 74 ARG 74 205 205 ARG ARG A . n A 1 75 ALA 75 206 206 ALA ALA A . n A 1 76 ARG 76 207 207 ARG ARG A . n A 1 77 ALA 77 208 208 ALA ALA A . n A 1 78 ARG 78 209 209 ARG ARG A . n A 1 79 THR 79 210 210 THR THR A . n A 1 80 ILE 80 211 211 ILE ILE A . n A 1 81 ILE 81 212 212 ILE ILE A . n A 1 82 LYS 82 213 213 LYS LYS A . n A 1 83 TRP 83 214 214 TRP TRP A . n A 1 84 GLN 84 215 215 GLN GLN A . n A 1 85 ASP 85 216 216 ASP ASP A . n A 1 86 LEU 86 217 217 LEU LEU A . n A 1 87 GLU 87 218 218 GLU GLU A . n A 1 88 VAL 88 219 219 VAL VAL A . n A 1 89 GLY 89 220 220 GLY GLY A . n A 1 90 GLN 90 221 221 GLN GLN A . n A 1 91 VAL 91 222 222 VAL VAL A . n A 1 92 VAL 92 223 223 VAL VAL A . n A 1 93 MET 93 224 224 MET MET A . n A 1 94 LEU 94 225 225 LEU LEU A . n A 1 95 ASN 95 226 226 ASN ASN A . n A 1 96 TYR 96 227 227 TYR TYR A . n A 1 97 ASN 97 228 228 ASN ASN A . n A 1 98 PRO 98 229 229 PRO PRO A . n A 1 99 ASP 99 230 230 ASP ASP A . n A 1 100 ASN 100 231 231 ASN ASN A . n A 1 101 PRO 101 232 232 PRO PRO A . n A 1 102 LYS 102 233 233 LYS LYS A . n A 1 103 GLU 103 234 234 GLU GLU A . n A 1 104 ARG 104 235 235 ARG ARG A . n A 1 105 GLY 105 236 236 GLY GLY A . n A 1 106 PHE 106 237 237 PHE PHE A . n A 1 107 TRP 107 238 238 TRP TRP A . n A 1 108 TYR 108 239 239 TYR TYR A . n A 1 109 ASP 109 240 240 ASP ASP A . n A 1 110 ALA 110 241 241 ALA ALA A . n A 1 111 GLU 111 242 242 GLU GLU A . n A 1 112 ILE 112 243 243 ILE ILE A . n A 1 113 SER 113 244 244 SER SER A . n A 1 114 ARG 114 245 245 ARG ARG A . n A 1 115 LYS 115 246 246 LYS LYS A . n A 1 116 ARG 116 247 247 ARG ARG A . n A 1 117 GLU 117 248 248 GLU GLU A . n A 1 118 THR 118 249 249 THR THR A . n A 1 119 ARG 119 250 250 ARG ARG A . n A 1 120 THR 120 251 251 THR THR A . n A 1 121 ALA 121 252 252 ALA ALA A . n A 1 122 ARG 122 253 253 ARG ARG A . n A 1 123 GLU 123 254 254 GLU GLU A . n A 1 124 LEU 124 255 255 LEU LEU A . n A 1 125 TYR 125 256 256 TYR TYR A . n A 1 126 ALA 126 257 257 ALA ALA A . n A 1 127 ASN 127 258 258 ASN ASN A . n A 1 128 VAL 128 259 259 VAL VAL A . n A 1 129 VAL 129 260 260 VAL VAL A . n A 1 130 LEU 130 261 261 LEU LEU A . n A 1 131 GLY 131 262 262 GLY GLY A . n A 1 132 ASP 132 263 ? ? ? A . n A 1 133 ASP 133 264 264 ASP ASP A . n A 1 134 SER 134 265 265 SER SER A . n A 1 135 LEU 135 266 266 LEU LEU A . n A 1 136 ASN 136 267 267 ASN ASN A . n A 1 137 ASP 137 268 268 ASP ASP A . n A 1 138 CYS 138 269 269 CYS CYS A . n A 1 139 ARG 139 270 270 ARG ARG A . n A 1 140 ILE 140 271 271 ILE ILE A . n A 1 141 ILE 141 272 272 ILE ILE A . n A 1 142 PHE 142 273 273 PHE PHE A . n A 1 143 VAL 143 274 274 VAL VAL A . n A 1 144 ASP 144 275 275 ASP ASP A . n A 1 145 GLU 145 276 276 GLU GLU A . n A 1 146 VAL 146 277 277 VAL VAL A . n A 1 147 PHE 147 278 278 PHE PHE A . n A 1 148 LYS 148 279 279 LYS LYS A . n A 1 149 ILE 149 280 280 ILE ILE A . n A 1 150 GLU 150 281 281 GLU GLU A . n A 1 151 ARG 151 282 282 ARG ARG A . n A 1 152 PRO 152 283 283 PRO PRO A . n A 1 153 GLY 153 284 ? ? ? A . n A 1 154 GLU 154 285 ? ? ? A . n B 1 1 ASP 1 123 ? ? ? B . n B 1 2 GLU 2 124 ? ? ? B . n B 1 3 ASP 3 125 125 ASP ASP B . n B 1 4 MET 4 126 126 MET MET B . n B 1 5 TRP 5 127 127 TRP TRP B . n B 1 6 ASP 6 128 128 ASP ASP B . n B 1 7 GLU 7 129 129 GLU GLU B . n B 1 8 THR 8 130 130 THR THR B . n B 1 9 GLU 9 131 131 GLU GLU B . n B 1 10 LEU 10 132 132 LEU LEU B . n B 1 11 GLY 11 133 133 GLY GLY B . n B 1 12 LEU 12 134 134 LEU LEU B . n B 1 13 TYR 13 135 135 TYR TYR B . n B 1 14 LYS 14 136 136 LYS LYS B . n B 1 15 VAL 15 137 137 VAL VAL B . n B 1 16 ASN 16 138 138 ASN ASN B . n B 1 17 GLU 17 139 139 GLU GLU B . n B 1 18 TYR 18 140 140 TYR TYR B . n B 1 19 VAL 19 141 141 VAL VAL B . n B 1 20 ASP 20 142 142 ASP ASP B . n B 1 21 ALA 21 143 143 ALA ALA B . n B 1 22 ARG 22 144 144 ARG ARG B . n B 1 23 ASP 23 145 145 ASP ASP B . n B 1 24 THR 24 146 146 THR THR B . n B 1 25 ASN 25 147 147 ASN ASN B . n B 1 26 MET 26 148 148 MET MET B . n B 1 27 GLY 27 149 149 GLY GLY B . n B 1 28 ALA 28 150 150 ALA ALA B . n B 1 29 TRP 29 151 151 TRP TRP B . n B 1 30 PHE 30 152 152 PHE PHE B . n B 1 31 GLU 31 153 153 GLU GLU B . n B 1 32 ALA 32 154 154 ALA ALA B . n B 1 33 GLN 33 155 155 GLN GLN B . n B 1 34 VAL 34 156 156 VAL VAL B . n B 1 35 VAL 35 157 157 VAL VAL B . n B 1 36 ARG 36 158 158 ARG ARG B . n B 1 37 VAL 37 159 159 VAL VAL B . n B 1 38 THR 38 160 160 THR THR B . n B 1 39 ARG 39 161 161 ARG ARG B . n B 1 40 LYS 40 171 ? ? ? B . n B 1 41 ALA 41 172 ? ? ? B . n B 1 42 PRO 42 173 ? ? ? B . n B 1 43 SER 43 174 ? ? ? B . n B 1 44 ARG 44 175 ? ? ? B . n B 1 45 PRO 45 176 ? ? ? B . n B 1 46 ALA 46 177 ? ? ? B . n B 1 47 LEU 47 178 ? ? ? B . n B 1 48 GLU 48 179 ? ? ? B . n B 1 49 GLU 49 180 ? ? ? B . n B 1 50 ASP 50 181 181 ASP ASP B . n B 1 51 VAL 51 182 182 VAL VAL B . n B 1 52 ILE 52 183 183 ILE ILE B . n B 1 53 TYR 53 184 184 TYR TYR B . n B 1 54 HIS 54 185 185 HIS HIS B . n B 1 55 VAL 55 186 186 VAL VAL B . n B 1 56 LYS 56 187 187 LYS LYS B . n B 1 57 TYR 57 188 188 TYR TYR B . n B 1 58 ASP 58 189 189 ASP ASP B . n B 1 59 ASP 59 190 190 ASP ASP B . n B 1 60 TYR 60 191 191 TYR TYR B . n B 1 61 PRO 61 192 192 PRO PRO B . n B 1 62 GLU 62 193 193 GLU GLU B . n B 1 63 ASN 63 194 194 ASN ASN B . n B 1 64 GLY 64 195 195 GLY GLY B . n B 1 65 VAL 65 196 196 VAL VAL B . n B 1 66 VAL 66 197 197 VAL VAL B . n B 1 67 GLN 67 198 198 GLN GLN B . n B 1 68 MET 68 199 199 MET MET B . n B 1 69 ASN 69 200 200 ASN ASN B . n B 1 70 SER 70 201 201 SER SER B . n B 1 71 ARG 71 202 202 ARG ARG B . n B 1 72 ASP 72 203 203 ASP ASP B . n B 1 73 VAL 73 204 204 VAL VAL B . n B 1 74 ARG 74 205 205 ARG ARG B . n B 1 75 ALA 75 206 206 ALA ALA B . n B 1 76 ARG 76 207 207 ARG ARG B . n B 1 77 ALA 77 208 208 ALA ALA B . n B 1 78 ARG 78 209 209 ARG ARG B . n B 1 79 THR 79 210 210 THR THR B . n B 1 80 ILE 80 211 211 ILE ILE B . n B 1 81 ILE 81 212 212 ILE ILE B . n B 1 82 LYS 82 213 213 LYS LYS B . n B 1 83 TRP 83 214 214 TRP TRP B . n B 1 84 GLN 84 215 215 GLN GLN B . n B 1 85 ASP 85 216 216 ASP ASP B . n B 1 86 LEU 86 217 217 LEU LEU B . n B 1 87 GLU 87 218 218 GLU GLU B . n B 1 88 VAL 88 219 219 VAL VAL B . n B 1 89 GLY 89 220 220 GLY GLY B . n B 1 90 GLN 90 221 221 GLN GLN B . n B 1 91 VAL 91 222 222 VAL VAL B . n B 1 92 VAL 92 223 223 VAL VAL B . n B 1 93 MET 93 224 224 MET MET B . n B 1 94 LEU 94 225 225 LEU LEU B . n B 1 95 ASN 95 226 226 ASN ASN B . n B 1 96 TYR 96 227 227 TYR TYR B . n B 1 97 ASN 97 228 228 ASN ASN B . n B 1 98 PRO 98 229 229 PRO PRO B . n B 1 99 ASP 99 230 230 ASP ASP B . n B 1 100 ASN 100 231 231 ASN ASN B . n B 1 101 PRO 101 232 232 PRO PRO B . n B 1 102 LYS 102 233 233 LYS LYS B . n B 1 103 GLU 103 234 234 GLU GLU B . n B 1 104 ARG 104 235 235 ARG ARG B . n B 1 105 GLY 105 236 236 GLY GLY B . n B 1 106 PHE 106 237 237 PHE PHE B . n B 1 107 TRP 107 238 238 TRP TRP B . n B 1 108 TYR 108 239 239 TYR TYR B . n B 1 109 ASP 109 240 240 ASP ASP B . n B 1 110 ALA 110 241 241 ALA ALA B . n B 1 111 GLU 111 242 242 GLU GLU B . n B 1 112 ILE 112 243 243 ILE ILE B . n B 1 113 SER 113 244 244 SER SER B . n B 1 114 ARG 114 245 245 ARG ARG B . n B 1 115 LYS 115 246 246 LYS LYS B . n B 1 116 ARG 116 247 247 ARG ARG B . n B 1 117 GLU 117 248 248 GLU GLU B . n B 1 118 THR 118 249 249 THR THR B . n B 1 119 ARG 119 250 250 ARG ARG B . n B 1 120 THR 120 251 251 THR THR B . n B 1 121 ALA 121 252 252 ALA ALA B . n B 1 122 ARG 122 253 253 ARG ARG B . n B 1 123 GLU 123 254 254 GLU GLU B . n B 1 124 LEU 124 255 255 LEU LEU B . n B 1 125 TYR 125 256 256 TYR TYR B . n B 1 126 ALA 126 257 257 ALA ALA B . n B 1 127 ASN 127 258 258 ASN ASN B . n B 1 128 VAL 128 259 259 VAL VAL B . n B 1 129 VAL 129 260 260 VAL VAL B . n B 1 130 LEU 130 261 261 LEU LEU B . n B 1 131 GLY 131 262 ? ? ? B . n B 1 132 ASP 132 263 ? ? ? B . n B 1 133 ASP 133 264 ? ? ? B . n B 1 134 SER 134 265 265 SER SER B . n B 1 135 LEU 135 266 266 LEU LEU B . n B 1 136 ASN 136 267 267 ASN ASN B . n B 1 137 ASP 137 268 268 ASP ASP B . n B 1 138 CYS 138 269 269 CYS CYS B . n B 1 139 ARG 139 270 270 ARG ARG B . n B 1 140 ILE 140 271 271 ILE ILE B . n B 1 141 ILE 141 272 272 ILE ILE B . n B 1 142 PHE 142 273 273 PHE PHE B . n B 1 143 VAL 143 274 274 VAL VAL B . n B 1 144 ASP 144 275 275 ASP ASP B . n B 1 145 GLU 145 276 276 GLU GLU B . n B 1 146 VAL 146 277 277 VAL VAL B . n B 1 147 PHE 147 278 278 PHE PHE B . n B 1 148 LYS 148 279 279 LYS LYS B . n B 1 149 ILE 149 280 280 ILE ILE B . n B 1 150 GLU 150 281 281 GLU GLU B . n B 1 151 ARG 151 282 282 ARG ARG B . n B 1 152 PRO 152 283 283 PRO PRO B . n B 1 153 GLY 153 284 284 GLY GLY B . n B 1 154 GLU 154 285 ? ? ? B . n C 2 1 ILE 1 118 118 ILE ILE C . n C 2 2 PRO 2 119 119 PRO PRO C . n C 2 3 LYS 3 120 120 LYS LYS C . n C 2 4 ARG 4 121 121 ARG ARG C . n C 2 5 ARG 5 122 122 ARG ARG C . n C 2 6 THR 6 123 123 THR THR C . n C 2 7 ALA 7 124 124 ALA ALA C . n C 2 8 ARG 8 125 125 ARG ARG C . n C 2 9 M3L 9 126 126 M3L M3L C . n C 2 10 GLN 10 127 127 GLN GLN C . n C 2 11 LEU 11 128 128 LEU LEU C . n C 2 12 PRO 12 129 129 PRO PRO C . n C 2 13 LYS 13 130 ? ? ? C . n D 2 1 ILE 1 118 118 ILE ILE D . n D 2 2 PRO 2 119 119 PRO PRO D . n D 2 3 LYS 3 120 120 LYS LYS D . n D 2 4 ARG 4 121 121 ARG ARG D . n D 2 5 ARG 5 122 122 ARG ARG D . n D 2 6 THR 6 123 123 THR THR D . n D 2 7 ALA 7 124 124 ALA ALA D . n D 2 8 ARG 8 125 125 ARG ARG D . n D 2 9 M3L 9 126 126 M3L M3L D . n D 2 10 GLN 10 127 127 GLN GLN D . n D 2 11 LEU 11 128 ? ? ? D . n D 2 12 PRO 12 129 ? ? ? D . n D 2 13 LYS 13 130 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 301 3 HOH HOH A . E 3 HOH 2 302 14 HOH HOH A . E 3 HOH 3 303 6 HOH HOH A . E 3 HOH 4 304 2 HOH HOH A . E 3 HOH 5 305 10 HOH HOH A . E 3 HOH 6 306 1 HOH HOH A . E 3 HOH 7 307 23 HOH HOH A . E 3 HOH 8 308 26 HOH HOH A . E 3 HOH 9 309 20 HOH HOH A . E 3 HOH 10 310 24 HOH HOH A . E 3 HOH 11 311 25 HOH HOH A . F 3 HOH 1 301 11 HOH HOH B . F 3 HOH 2 302 21 HOH HOH B . F 3 HOH 3 303 16 HOH HOH B . F 3 HOH 4 304 4 HOH HOH B . F 3 HOH 5 305 22 HOH HOH B . F 3 HOH 6 306 9 HOH HOH B . F 3 HOH 7 307 8 HOH HOH B . F 3 HOH 8 308 7 HOH HOH B . F 3 HOH 9 309 19 HOH HOH B . F 3 HOH 10 310 15 HOH HOH B . F 3 HOH 11 311 17 HOH HOH B . G 3 HOH 1 201 27 HOH HOH C . H 3 HOH 1 201 12 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,G 2 1 B,D,F,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1450 ? 1 MORE -4 ? 1 'SSA (A^2)' 9240 ? 2 'ABSA (A^2)' 1390 ? 2 MORE -5 ? 2 'SSA (A^2)' 8780 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-12-12 2 'Structure model' 1 1 2019-01-23 3 'Structure model' 1 2 2019-03-20 4 'Structure model' 1 3 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 7 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 3 'Structure model' '_citation.journal_volume' 11 3 'Structure model' '_citation.page_first' 12 3 'Structure model' '_citation.year' 13 4 'Structure model' '_database_2.pdbx_DOI' 14 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.10.1_2155)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 139 ? ? 84.33 71.77 2 1 ASN A 231 ? ? -155.15 70.22 3 1 ASN B 231 ? ? -155.51 70.34 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 139 ? CG ? A GLU 17 CG 2 1 Y 1 A GLU 139 ? CD ? A GLU 17 CD 3 1 Y 1 A GLU 139 ? OE1 ? A GLU 17 OE1 4 1 Y 1 A GLU 139 ? OE2 ? A GLU 17 OE2 5 1 Y 1 A GLU 179 ? CG ? A GLU 48 CG 6 1 Y 1 A GLU 179 ? CD ? A GLU 48 CD 7 1 Y 1 A GLU 179 ? OE1 ? A GLU 48 OE1 8 1 Y 1 A GLU 179 ? OE2 ? A GLU 48 OE2 9 1 Y 1 A GLU 180 ? CD ? A GLU 49 CD 10 1 Y 1 A GLU 180 ? OE1 ? A GLU 49 OE1 11 1 Y 1 A GLU 180 ? OE2 ? A GLU 49 OE2 12 1 Y 1 A LYS 187 ? CE ? A LYS 56 CE 13 1 Y 1 A LYS 187 ? NZ ? A LYS 56 NZ 14 1 Y 1 A ARG 209 ? NH1 ? A ARG 78 NH1 15 1 Y 1 A ARG 209 ? NH2 ? A ARG 78 NH2 16 1 Y 1 A LYS 213 ? CD ? A LYS 82 CD 17 1 Y 1 A LYS 213 ? CE ? A LYS 82 CE 18 1 Y 1 A LYS 213 ? NZ ? A LYS 82 NZ 19 1 Y 1 A GLN 215 ? CG ? A GLN 84 CG 20 1 Y 1 A GLN 215 ? CD ? A GLN 84 CD 21 1 Y 1 A GLN 215 ? OE1 ? A GLN 84 OE1 22 1 Y 1 A GLN 215 ? NE2 ? A GLN 84 NE2 23 1 Y 1 A GLU 218 ? OE1 ? A GLU 87 OE1 24 1 Y 1 A GLU 218 ? OE2 ? A GLU 87 OE2 25 1 Y 1 A LYS 233 ? CD ? A LYS 102 CD 26 1 Y 1 A LYS 233 ? CE ? A LYS 102 CE 27 1 Y 1 A LYS 233 ? NZ ? A LYS 102 NZ 28 1 Y 1 A ARG 250 ? CD ? A ARG 119 CD 29 1 Y 1 A ARG 250 ? NE ? A ARG 119 NE 30 1 Y 1 A ARG 250 ? CZ ? A ARG 119 CZ 31 1 Y 1 A ARG 250 ? NH1 ? A ARG 119 NH1 32 1 Y 1 A ARG 250 ? NH2 ? A ARG 119 NH2 33 1 Y 1 A ASP 264 ? CG ? A ASP 133 CG 34 1 Y 1 A ASP 264 ? OD1 ? A ASP 133 OD1 35 1 Y 1 A ASP 264 ? OD2 ? A ASP 133 OD2 36 1 Y 1 A ARG 270 ? CD ? A ARG 139 CD 37 1 Y 1 A ARG 270 ? NE ? A ARG 139 NE 38 1 Y 1 A ARG 270 ? CZ ? A ARG 139 CZ 39 1 Y 1 A ARG 270 ? NH1 ? A ARG 139 NH1 40 1 Y 1 A ARG 270 ? NH2 ? A ARG 139 NH2 41 1 Y 1 A LYS 279 ? CE ? A LYS 148 CE 42 1 Y 1 A LYS 279 ? NZ ? A LYS 148 NZ 43 1 Y 1 B ASP 125 ? CG ? B ASP 3 CG 44 1 Y 1 B ASP 125 ? OD1 ? B ASP 3 OD1 45 1 Y 1 B ASP 125 ? OD2 ? B ASP 3 OD2 46 1 Y 1 B MET 126 ? CG ? B MET 4 CG 47 1 Y 1 B MET 126 ? SD ? B MET 4 SD 48 1 Y 1 B MET 126 ? CE ? B MET 4 CE 49 1 Y 1 B GLU 129 ? CD ? B GLU 7 CD 50 1 Y 1 B GLU 129 ? OE1 ? B GLU 7 OE1 51 1 Y 1 B GLU 129 ? OE2 ? B GLU 7 OE2 52 1 Y 1 B ARG 161 ? CZ ? B ARG 39 CZ 53 1 Y 1 B ARG 161 ? NH1 ? B ARG 39 NH1 54 1 Y 1 B ARG 161 ? NH2 ? B ARG 39 NH2 55 1 Y 1 B ASP 181 ? CB ? B ASP 50 CB 56 1 Y 1 B ASP 181 ? CG ? B ASP 50 CG 57 1 Y 1 B ASP 181 ? OD1 ? B ASP 50 OD1 58 1 Y 1 B ASP 181 ? OD2 ? B ASP 50 OD2 59 1 Y 1 B LYS 187 ? CD ? B LYS 56 CD 60 1 Y 1 B LYS 187 ? CE ? B LYS 56 CE 61 1 Y 1 B LYS 187 ? NZ ? B LYS 56 NZ 62 1 Y 1 B LYS 213 ? CE ? B LYS 82 CE 63 1 Y 1 B LYS 213 ? NZ ? B LYS 82 NZ 64 1 Y 1 B GLN 215 ? CG ? B GLN 84 CG 65 1 Y 1 B GLN 215 ? CD ? B GLN 84 CD 66 1 Y 1 B GLN 215 ? OE1 ? B GLN 84 OE1 67 1 Y 1 B GLN 215 ? NE2 ? B GLN 84 NE2 68 1 Y 1 B GLU 218 ? CD ? B GLU 87 CD 69 1 Y 1 B GLU 218 ? OE1 ? B GLU 87 OE1 70 1 Y 1 B GLU 218 ? OE2 ? B GLU 87 OE2 71 1 Y 1 B LYS 233 ? CE ? B LYS 102 CE 72 1 Y 1 B LYS 233 ? NZ ? B LYS 102 NZ 73 1 Y 1 B GLU 234 ? CD ? B GLU 103 CD 74 1 Y 1 B GLU 234 ? OE1 ? B GLU 103 OE1 75 1 Y 1 B GLU 234 ? OE2 ? B GLU 103 OE2 76 1 Y 1 B ARG 250 ? NE ? B ARG 119 NE 77 1 Y 1 B ARG 250 ? CZ ? B ARG 119 CZ 78 1 Y 1 B ARG 250 ? NH1 ? B ARG 119 NH1 79 1 Y 1 B ARG 250 ? NH2 ? B ARG 119 NH2 80 1 Y 1 B ARG 270 ? NE ? B ARG 139 NE 81 1 Y 1 B ARG 270 ? CZ ? B ARG 139 CZ 82 1 Y 1 B ARG 270 ? NH1 ? B ARG 139 NH1 83 1 Y 1 B ARG 270 ? NH2 ? B ARG 139 NH2 84 1 Y 1 C ILE 118 ? CG1 ? C ILE 1 CG1 85 1 Y 1 C ILE 118 ? CG2 ? C ILE 1 CG2 86 1 Y 1 C ILE 118 ? CD1 ? C ILE 1 CD1 87 1 Y 1 C LYS 120 ? CD ? C LYS 3 CD 88 1 Y 1 C LYS 120 ? CE ? C LYS 3 CE 89 1 Y 1 C LYS 120 ? NZ ? C LYS 3 NZ 90 1 Y 1 D ILE 118 ? CG1 ? D ILE 1 CG1 91 1 Y 1 D ILE 118 ? CG2 ? D ILE 1 CG2 92 1 Y 1 D ILE 118 ? CD1 ? D ILE 1 CD1 93 1 Y 1 D LYS 120 ? CD ? D LYS 3 CD 94 1 Y 1 D LYS 120 ? CE ? D LYS 3 CE 95 1 Y 1 D LYS 120 ? NZ ? D LYS 3 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 123 ? A ASP 1 2 1 Y 1 A GLU 124 ? A GLU 2 3 1 Y 1 A ASP 125 ? A ASP 3 4 1 Y 1 A MET 126 ? A MET 4 5 1 Y 1 A TRP 127 ? A TRP 5 6 1 Y 1 A ASP 128 ? A ASP 6 7 1 Y 1 A GLU 129 ? A GLU 7 8 1 Y 1 A THR 130 ? A THR 8 9 1 Y 1 A GLU 131 ? A GLU 9 10 1 Y 1 A LEU 132 ? A LEU 10 11 1 Y 1 A GLY 133 ? A GLY 11 12 1 Y 1 A LEU 134 ? A LEU 12 13 1 Y 1 A TYR 135 ? A TYR 13 14 1 Y 1 A LYS 136 ? A LYS 14 15 1 Y 1 A ASP 263 ? A ASP 132 16 1 Y 1 A GLY 284 ? A GLY 153 17 1 Y 1 A GLU 285 ? A GLU 154 18 1 Y 1 B ASP 123 ? B ASP 1 19 1 Y 1 B GLU 124 ? B GLU 2 20 1 Y 1 B LYS 171 ? B LYS 40 21 1 Y 1 B ALA 172 ? B ALA 41 22 1 Y 1 B PRO 173 ? B PRO 42 23 1 Y 1 B SER 174 ? B SER 43 24 1 Y 1 B ARG 175 ? B ARG 44 25 1 Y 1 B PRO 176 ? B PRO 45 26 1 Y 1 B ALA 177 ? B ALA 46 27 1 Y 1 B LEU 178 ? B LEU 47 28 1 Y 1 B GLU 179 ? B GLU 48 29 1 Y 1 B GLU 180 ? B GLU 49 30 1 Y 1 B GLY 262 ? B GLY 131 31 1 Y 1 B ASP 263 ? B ASP 132 32 1 Y 1 B ASP 264 ? B ASP 133 33 1 Y 1 B GLU 285 ? B GLU 154 34 1 Y 1 C LYS 130 ? C LYS 13 35 1 Y 1 D LEU 128 ? D LEU 11 36 1 Y 1 D PRO 129 ? D PRO 12 37 1 Y 1 D LYS 130 ? D LYS 13 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 M3L N N N N 230 M3L CA C N S 231 M3L CB C N N 232 M3L CG C N N 233 M3L CD C N N 234 M3L CE C N N 235 M3L NZ N N N 236 M3L C C N N 237 M3L O O N N 238 M3L OXT O N N 239 M3L CM1 C N N 240 M3L CM2 C N N 241 M3L CM3 C N N 242 M3L H H N N 243 M3L H2 H N N 244 M3L HA H N N 245 M3L HB2 H N N 246 M3L HB3 H N N 247 M3L HG2 H N N 248 M3L HG3 H N N 249 M3L HD2 H N N 250 M3L HD3 H N N 251 M3L HE2 H N N 252 M3L HE3 H N N 253 M3L HXT H N N 254 M3L HM11 H N N 255 M3L HM12 H N N 256 M3L HM13 H N N 257 M3L HM21 H N N 258 M3L HM22 H N N 259 M3L HM23 H N N 260 M3L HM31 H N N 261 M3L HM32 H N N 262 M3L HM33 H N N 263 MET N N N N 264 MET CA C N S 265 MET C C N N 266 MET O O N N 267 MET CB C N N 268 MET CG C N N 269 MET SD S N N 270 MET CE C N N 271 MET OXT O N N 272 MET H H N N 273 MET H2 H N N 274 MET HA H N N 275 MET HB2 H N N 276 MET HB3 H N N 277 MET HG2 H N N 278 MET HG3 H N N 279 MET HE1 H N N 280 MET HE2 H N N 281 MET HE3 H N N 282 MET HXT H N N 283 PHE N N N N 284 PHE CA C N S 285 PHE C C N N 286 PHE O O N N 287 PHE CB C N N 288 PHE CG C Y N 289 PHE CD1 C Y N 290 PHE CD2 C Y N 291 PHE CE1 C Y N 292 PHE CE2 C Y N 293 PHE CZ C Y N 294 PHE OXT O N N 295 PHE H H N N 296 PHE H2 H N N 297 PHE HA H N N 298 PHE HB2 H N N 299 PHE HB3 H N N 300 PHE HD1 H N N 301 PHE HD2 H N N 302 PHE HE1 H N N 303 PHE HE2 H N N 304 PHE HZ H N N 305 PHE HXT H N N 306 PRO N N N N 307 PRO CA C N S 308 PRO C C N N 309 PRO O O N N 310 PRO CB C N N 311 PRO CG C N N 312 PRO CD C N N 313 PRO OXT O N N 314 PRO H H N N 315 PRO HA H N N 316 PRO HB2 H N N 317 PRO HB3 H N N 318 PRO HG2 H N N 319 PRO HG3 H N N 320 PRO HD2 H N N 321 PRO HD3 H N N 322 PRO HXT H N N 323 SER N N N N 324 SER CA C N S 325 SER C C N N 326 SER O O N N 327 SER CB C N N 328 SER OG O N N 329 SER OXT O N N 330 SER H H N N 331 SER H2 H N N 332 SER HA H N N 333 SER HB2 H N N 334 SER HB3 H N N 335 SER HG H N N 336 SER HXT H N N 337 THR N N N N 338 THR CA C N S 339 THR C C N N 340 THR O O N N 341 THR CB C N R 342 THR OG1 O N N 343 THR CG2 C N N 344 THR OXT O N N 345 THR H H N N 346 THR H2 H N N 347 THR HA H N N 348 THR HB H N N 349 THR HG1 H N N 350 THR HG21 H N N 351 THR HG22 H N N 352 THR HG23 H N N 353 THR HXT H N N 354 TRP N N N N 355 TRP CA C N S 356 TRP C C N N 357 TRP O O N N 358 TRP CB C N N 359 TRP CG C Y N 360 TRP CD1 C Y N 361 TRP CD2 C Y N 362 TRP NE1 N Y N 363 TRP CE2 C Y N 364 TRP CE3 C Y N 365 TRP CZ2 C Y N 366 TRP CZ3 C Y N 367 TRP CH2 C Y N 368 TRP OXT O N N 369 TRP H H N N 370 TRP H2 H N N 371 TRP HA H N N 372 TRP HB2 H N N 373 TRP HB3 H N N 374 TRP HD1 H N N 375 TRP HE1 H N N 376 TRP HE3 H N N 377 TRP HZ2 H N N 378 TRP HZ3 H N N 379 TRP HH2 H N N 380 TRP HXT H N N 381 TYR N N N N 382 TYR CA C N S 383 TYR C C N N 384 TYR O O N N 385 TYR CB C N N 386 TYR CG C Y N 387 TYR CD1 C Y N 388 TYR CD2 C Y N 389 TYR CE1 C Y N 390 TYR CE2 C Y N 391 TYR CZ C Y N 392 TYR OH O N N 393 TYR OXT O N N 394 TYR H H N N 395 TYR H2 H N N 396 TYR HA H N N 397 TYR HB2 H N N 398 TYR HB3 H N N 399 TYR HD1 H N N 400 TYR HD2 H N N 401 TYR HE1 H N N 402 TYR HE2 H N N 403 TYR HH H N N 404 TYR HXT H N N 405 VAL N N N N 406 VAL CA C N S 407 VAL C C N N 408 VAL O O N N 409 VAL CB C N N 410 VAL CG1 C N N 411 VAL CG2 C N N 412 VAL OXT O N N 413 VAL H H N N 414 VAL H2 H N N 415 VAL HA H N N 416 VAL HB H N N 417 VAL HG11 H N N 418 VAL HG12 H N N 419 VAL HG13 H N N 420 VAL HG21 H N N 421 VAL HG22 H N N 422 VAL HG23 H N N 423 VAL HXT H N N 424 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 M3L N CA sing N N 218 M3L N H sing N N 219 M3L N H2 sing N N 220 M3L CA CB sing N N 221 M3L CA C sing N N 222 M3L CA HA sing N N 223 M3L CB CG sing N N 224 M3L CB HB2 sing N N 225 M3L CB HB3 sing N N 226 M3L CG CD sing N N 227 M3L CG HG2 sing N N 228 M3L CG HG3 sing N N 229 M3L CD CE sing N N 230 M3L CD HD2 sing N N 231 M3L CD HD3 sing N N 232 M3L CE NZ sing N N 233 M3L CE HE2 sing N N 234 M3L CE HE3 sing N N 235 M3L NZ CM1 sing N N 236 M3L NZ CM2 sing N N 237 M3L NZ CM3 sing N N 238 M3L C O doub N N 239 M3L C OXT sing N N 240 M3L OXT HXT sing N N 241 M3L CM1 HM11 sing N N 242 M3L CM1 HM12 sing N N 243 M3L CM1 HM13 sing N N 244 M3L CM2 HM21 sing N N 245 M3L CM2 HM22 sing N N 246 M3L CM2 HM23 sing N N 247 M3L CM3 HM31 sing N N 248 M3L CM3 HM32 sing N N 249 M3L CM3 HM33 sing N N 250 MET N CA sing N N 251 MET N H sing N N 252 MET N H2 sing N N 253 MET CA C sing N N 254 MET CA CB sing N N 255 MET CA HA sing N N 256 MET C O doub N N 257 MET C OXT sing N N 258 MET CB CG sing N N 259 MET CB HB2 sing N N 260 MET CB HB3 sing N N 261 MET CG SD sing N N 262 MET CG HG2 sing N N 263 MET CG HG3 sing N N 264 MET SD CE sing N N 265 MET CE HE1 sing N N 266 MET CE HE2 sing N N 267 MET CE HE3 sing N N 268 MET OXT HXT sing N N 269 PHE N CA sing N N 270 PHE N H sing N N 271 PHE N H2 sing N N 272 PHE CA C sing N N 273 PHE CA CB sing N N 274 PHE CA HA sing N N 275 PHE C O doub N N 276 PHE C OXT sing N N 277 PHE CB CG sing N N 278 PHE CB HB2 sing N N 279 PHE CB HB3 sing N N 280 PHE CG CD1 doub Y N 281 PHE CG CD2 sing Y N 282 PHE CD1 CE1 sing Y N 283 PHE CD1 HD1 sing N N 284 PHE CD2 CE2 doub Y N 285 PHE CD2 HD2 sing N N 286 PHE CE1 CZ doub Y N 287 PHE CE1 HE1 sing N N 288 PHE CE2 CZ sing Y N 289 PHE CE2 HE2 sing N N 290 PHE CZ HZ sing N N 291 PHE OXT HXT sing N N 292 PRO N CA sing N N 293 PRO N CD sing N N 294 PRO N H sing N N 295 PRO CA C sing N N 296 PRO CA CB sing N N 297 PRO CA HA sing N N 298 PRO C O doub N N 299 PRO C OXT sing N N 300 PRO CB CG sing N N 301 PRO CB HB2 sing N N 302 PRO CB HB3 sing N N 303 PRO CG CD sing N N 304 PRO CG HG2 sing N N 305 PRO CG HG3 sing N N 306 PRO CD HD2 sing N N 307 PRO CD HD3 sing N N 308 PRO OXT HXT sing N N 309 SER N CA sing N N 310 SER N H sing N N 311 SER N H2 sing N N 312 SER CA C sing N N 313 SER CA CB sing N N 314 SER CA HA sing N N 315 SER C O doub N N 316 SER C OXT sing N N 317 SER CB OG sing N N 318 SER CB HB2 sing N N 319 SER CB HB3 sing N N 320 SER OG HG sing N N 321 SER OXT HXT sing N N 322 THR N CA sing N N 323 THR N H sing N N 324 THR N H2 sing N N 325 THR CA C sing N N 326 THR CA CB sing N N 327 THR CA HA sing N N 328 THR C O doub N N 329 THR C OXT sing N N 330 THR CB OG1 sing N N 331 THR CB CG2 sing N N 332 THR CB HB sing N N 333 THR OG1 HG1 sing N N 334 THR CG2 HG21 sing N N 335 THR CG2 HG22 sing N N 336 THR CG2 HG23 sing N N 337 THR OXT HXT sing N N 338 TRP N CA sing N N 339 TRP N H sing N N 340 TRP N H2 sing N N 341 TRP CA C sing N N 342 TRP CA CB sing N N 343 TRP CA HA sing N N 344 TRP C O doub N N 345 TRP C OXT sing N N 346 TRP CB CG sing N N 347 TRP CB HB2 sing N N 348 TRP CB HB3 sing N N 349 TRP CG CD1 doub Y N 350 TRP CG CD2 sing Y N 351 TRP CD1 NE1 sing Y N 352 TRP CD1 HD1 sing N N 353 TRP CD2 CE2 doub Y N 354 TRP CD2 CE3 sing Y N 355 TRP NE1 CE2 sing Y N 356 TRP NE1 HE1 sing N N 357 TRP CE2 CZ2 sing Y N 358 TRP CE3 CZ3 doub Y N 359 TRP CE3 HE3 sing N N 360 TRP CZ2 CH2 doub Y N 361 TRP CZ2 HZ2 sing N N 362 TRP CZ3 CH2 sing Y N 363 TRP CZ3 HZ3 sing N N 364 TRP CH2 HH2 sing N N 365 TRP OXT HXT sing N N 366 TYR N CA sing N N 367 TYR N H sing N N 368 TYR N H2 sing N N 369 TYR CA C sing N N 370 TYR CA CB sing N N 371 TYR CA HA sing N N 372 TYR C O doub N N 373 TYR C OXT sing N N 374 TYR CB CG sing N N 375 TYR CB HB2 sing N N 376 TYR CB HB3 sing N N 377 TYR CG CD1 doub Y N 378 TYR CG CD2 sing Y N 379 TYR CD1 CE1 sing Y N 380 TYR CD1 HD1 sing N N 381 TYR CD2 CE2 doub Y N 382 TYR CD2 HD2 sing N N 383 TYR CE1 CZ doub Y N 384 TYR CE1 HE1 sing N N 385 TYR CE2 CZ sing Y N 386 TYR CE2 HE2 sing N N 387 TYR CZ OH sing N N 388 TYR OH HH sing N N 389 TYR OXT HXT sing N N 390 VAL N CA sing N N 391 VAL N H sing N N 392 VAL N H2 sing N N 393 VAL CA C sing N N 394 VAL CA CB sing N N 395 VAL CA HA sing N N 396 VAL C O doub N N 397 VAL C OXT sing N N 398 VAL CB CG1 sing N N 399 VAL CB CG2 sing N N 400 VAL CB HB sing N N 401 VAL CG1 HG11 sing N N 402 VAL CG1 HG12 sing N N 403 VAL CG1 HG13 sing N N 404 VAL CG2 HG21 sing N N 405 VAL CG2 HG22 sing N N 406 VAL CG2 HG23 sing N N 407 VAL OXT HXT sing N N 408 # _pdbx_audit_support.funding_organization JST _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number 'PRESTO 14530337' _pdbx_audit_support.ordinal 1 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3DB3 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'isothermal titration calorimetry' _pdbx_struct_assembly_auth_evidence.details ? #