data_5Z8L # _entry.id 5Z8L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.296 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5Z8L WWPDB D_1300006663 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5Z8L _pdbx_database_status.recvd_initial_deposition_date 2018-01-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yang, Z.' 1 ? 'Du, J.' 2 0000-0002-1337-0786 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat. Genet.' _citation.journal_id_ASTM ? _citation.journal_id_CSD 9999 _citation.journal_id_ISSN 1546-1718 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 50 _citation.language ? _citation.page_first 1247 _citation.page_last 1253 _citation.title 'EBS is a bivalent histone reader that regulates floral phase transition in Arabidopsis.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41588-018-0187-8 _citation.pdbx_database_id_PubMed 30082787 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yang, Z.' 1 ? primary 'Qian, S.' 2 0000-0002-8510-3863 primary 'Scheid, R.N.' 3 ? primary 'Lu, L.' 4 ? primary 'Chen, X.' 5 ? primary 'Liu, R.' 6 ? primary 'Du, X.' 7 ? primary 'Lv, X.' 8 ? primary 'Boersma, M.D.' 9 ? primary 'Scalf, M.' 10 ? primary 'Smith, L.M.' 11 ? primary 'Denu, J.M.' 12 ? primary 'Du, J.' 13 0000-0002-1337-0786 primary 'Zhong, X.' 14 0000-0002-2350-0046 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5Z8L _cell.details ? _cell.formula_units_Z ? _cell.length_a 36.247 _cell.length_a_esd ? _cell.length_b 60.299 _cell.length_b_esd ? _cell.length_c 98.038 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Z8L _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Chromatin remodeling protein EBS' 26493.152 1 ? K201A,K202A ? ? 2 polymer syn 'H3K27me3 peptide' 1543.830 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 4 water nat water 18.015 108 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Protein EARLY BOLTING IN SHORT DAYS' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MAKTRPGVASKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARNNVKVHCRWYYRPEESLGG RRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDL MVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAECSSDDDVAASQNGFTSSPADDVKVRLSLFSHLLYRCSITYL ; ;MAKTRPGVASKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARNNVKVHCRWYYRPEESLGG RRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDL MVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAECSSDDDVAASQNGFTSSPADDVKVRLSLFSHLLYRCSITYL ; A ? 2 'polypeptide(L)' no yes 'LATKAAR(M3L)SAPATGGV' LATKAARKSAPATGGV P ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 LYS n 1 4 THR n 1 5 ARG n 1 6 PRO n 1 7 GLY n 1 8 VAL n 1 9 ALA n 1 10 SER n 1 11 LYS n 1 12 ILE n 1 13 LYS n 1 14 THR n 1 15 GLY n 1 16 ARG n 1 17 LYS n 1 18 GLU n 1 19 LEU n 1 20 ASP n 1 21 SER n 1 22 TYR n 1 23 THR n 1 24 ILE n 1 25 LYS n 1 26 GLY n 1 27 THR n 1 28 ASN n 1 29 LYS n 1 30 VAL n 1 31 VAL n 1 32 ARG n 1 33 ALA n 1 34 GLY n 1 35 ASP n 1 36 CYS n 1 37 VAL n 1 38 LEU n 1 39 MET n 1 40 ARG n 1 41 PRO n 1 42 SER n 1 43 ASP n 1 44 ALA n 1 45 GLY n 1 46 LYS n 1 47 PRO n 1 48 PRO n 1 49 TYR n 1 50 VAL n 1 51 ALA n 1 52 ARG n 1 53 VAL n 1 54 GLU n 1 55 LYS n 1 56 ILE n 1 57 GLU n 1 58 ALA n 1 59 ASP n 1 60 ALA n 1 61 ARG n 1 62 ASN n 1 63 ASN n 1 64 VAL n 1 65 LYS n 1 66 VAL n 1 67 HIS n 1 68 CYS n 1 69 ARG n 1 70 TRP n 1 71 TYR n 1 72 TYR n 1 73 ARG n 1 74 PRO n 1 75 GLU n 1 76 GLU n 1 77 SER n 1 78 LEU n 1 79 GLY n 1 80 GLY n 1 81 ARG n 1 82 ARG n 1 83 GLN n 1 84 PHE n 1 85 HIS n 1 86 GLY n 1 87 ALA n 1 88 LYS n 1 89 GLU n 1 90 LEU n 1 91 PHE n 1 92 LEU n 1 93 SER n 1 94 ASP n 1 95 HIS n 1 96 PHE n 1 97 ASP n 1 98 VAL n 1 99 GLN n 1 100 SER n 1 101 ALA n 1 102 HIS n 1 103 THR n 1 104 ILE n 1 105 GLU n 1 106 GLY n 1 107 LYS n 1 108 CYS n 1 109 ILE n 1 110 VAL n 1 111 HIS n 1 112 THR n 1 113 PHE n 1 114 LYS n 1 115 ASN n 1 116 TYR n 1 117 THR n 1 118 ARG n 1 119 LEU n 1 120 GLU n 1 121 ASN n 1 122 VAL n 1 123 GLY n 1 124 ALA n 1 125 GLU n 1 126 ASP n 1 127 TYR n 1 128 TYR n 1 129 CYS n 1 130 ARG n 1 131 PHE n 1 132 GLU n 1 133 TYR n 1 134 LYS n 1 135 ALA n 1 136 ALA n 1 137 THR n 1 138 GLY n 1 139 ALA n 1 140 PHE n 1 141 THR n 1 142 PRO n 1 143 ASP n 1 144 ARG n 1 145 VAL n 1 146 ALA n 1 147 VAL n 1 148 TYR n 1 149 CYS n 1 150 LYS n 1 151 CYS n 1 152 GLU n 1 153 MET n 1 154 PRO n 1 155 TYR n 1 156 ASN n 1 157 PRO n 1 158 ASP n 1 159 ASP n 1 160 LEU n 1 161 MET n 1 162 VAL n 1 163 GLN n 1 164 CYS n 1 165 GLU n 1 166 GLY n 1 167 CYS n 1 168 LYS n 1 169 ASP n 1 170 TRP n 1 171 TYR n 1 172 HIS n 1 173 PRO n 1 174 ALA n 1 175 CYS n 1 176 VAL n 1 177 GLY n 1 178 MET n 1 179 THR n 1 180 ILE n 1 181 GLU n 1 182 GLU n 1 183 ALA n 1 184 LYS n 1 185 LYS n 1 186 LEU n 1 187 ASP n 1 188 HIS n 1 189 PHE n 1 190 VAL n 1 191 CYS n 1 192 ALA n 1 193 GLU n 1 194 CYS n 1 195 SER n 1 196 SER n 1 197 ASP n 1 198 ASP n 1 199 ASP n 1 200 VAL n 1 201 ALA n 1 202 ALA n 1 203 SER n 1 204 GLN n 1 205 ASN n 1 206 GLY n 1 207 PHE n 1 208 THR n 1 209 SER n 1 210 SER n 1 211 PRO n 1 212 ALA n 1 213 ASP n 1 214 ASP n 1 215 VAL n 1 216 LYS n 1 217 VAL n 1 218 ARG n 1 219 LEU n 1 220 SER n 1 221 LEU n 1 222 PHE n 1 223 SER n 1 224 HIS n 1 225 LEU n 1 226 LEU n 1 227 TYR n 1 228 ARG n 1 229 CYS n 1 230 SER n 1 231 ILE n 1 232 THR n 1 233 TYR n 1 234 LEU n 2 1 LEU n 2 2 ALA n 2 3 THR n 2 4 LYS n 2 5 ALA n 2 6 ALA n 2 7 ARG n 2 8 M3L n 2 9 SER n 2 10 ALA n 2 11 PRO n 2 12 ALA n 2 13 THR n 2 14 GLY n 2 15 GLY n 2 16 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 234 _entity_src_gen.gene_src_common_name 'Mouse-ear cress' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'EBS, At4g22140, F1N20.240' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Arabidopsis thaliana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3702 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant RIL _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pSumo _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 16 _pdbx_entity_src_syn.organism_scientific 'Arabidopsis thaliana' _pdbx_entity_src_syn.organism_common_name 'Mouse-ear cress' _pdbx_entity_src_syn.ncbi_taxonomy_id 3702 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP EBS_ARATH F4JL28 ? 1 ;MAKTRPGVASKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARNNVKVHCRWYYRPEESLGG RRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDL MVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAECSSDDDVKKSQNGFTSSPADDVKVRLSLFSHLLYRCSITYL ; 1 2 UNP H32_ARATH P59226 ? 2 LATKAARKSAPATGGV 21 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5Z8L A 1 ? 234 ? F4JL28 1 ? 234 ? 1 234 2 2 5Z8L P 1 ? 16 ? P59226 21 ? 36 ? 20 35 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5Z8L ALA A 201 ? UNP F4JL28 LYS 201 'engineered mutation' 201 1 1 5Z8L ALA A 202 ? UNP F4JL28 LYS 202 'engineered mutation' 202 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 M3L 'L-peptide linking' n N-TRIMETHYLLYSINE ? 'C9 H21 N2 O2 1' 189.275 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5Z8L _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.91 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 35.62 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2M sodium acetate, 20% PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-12-07 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.2827 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.2827 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5Z8L _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 14980 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 13.6 _reflns.pdbx_Rmerge_I_obs 0.103 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.103 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 51.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.07 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 5.6 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.797 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 13.5 _reflns_shell.pdbx_Rsym_value 0.797 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5Z8L _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.005 _refine.ls_d_res_low 49.019 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 14932 _refine.ls_number_reflns_R_free 753 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.55 _refine.ls_percent_reflns_R_free 5.03 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2026 _refine.ls_R_factor_R_free 0.2301 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2012 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.22 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.82 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.24 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1674 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 108 _refine_hist.number_atoms_total 1784 _refine_hist.d_res_high 2.005 _refine_hist.d_res_low 49.019 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 ? 1710 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.203 ? 2303 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 14.875 ? 642 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.074 ? 242 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 ? 297 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.0055 2.0771 . 1441 148 2487 96.00 . . . 0.2659 . 0.2584 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0771 2.1603 . . 121 2644 100.00 . . . 0.2581 . 0.2546 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1603 2.2586 . . 155 2657 100.00 . . . 0.2632 . 0.2240 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2586 2.3777 . . 125 2627 100.00 . . . 0.2806 . 0.2343 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3777 2.5267 . . 133 2653 100.00 . . . 0.2624 . 0.2269 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5267 2.7217 . . 150 2630 100.00 . . . 0.2698 . 0.2261 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7217 2.9956 . . 152 2647 100.00 . . . 0.2860 . 0.2203 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9956 3.4290 . . 169 2593 100.00 . . . 0.2131 . 0.2079 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4290 4.3197 . . 138 2652 100.00 . . . 0.1958 . 0.1665 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.3197 49.0336 . . 100 2676 100.00 . . . 0.1934 . 0.1786 . . . . . . . . . . # _struct.entry_id 5Z8L _struct.title 'crystal structure of Arabidopsis thaliana EBS in complex with an H3K27me3 peptide' _struct.pdbx_descriptor 'Probable lysine-specific demethylase JMJ14 (E.C.1.14.11.-)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5Z8L _struct_keywords.text 'EBS, BAH, PHD, H3K27me3, histone reader, GENE REGULATION' _struct_keywords.pdbx_keywords 'GENE REGULATION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG A 73 ? SER A 77 ? ARG A 73 SER A 77 5 ? 5 HELX_P HELX_P2 AA2 PHE A 113 ? ARG A 118 ? PHE A 113 ARG A 118 1 ? 6 HELX_P HELX_P3 AA3 HIS A 172 ? GLY A 177 ? HIS A 172 GLY A 177 5 ? 6 HELX_P HELX_P4 AA4 THR A 179 ? LEU A 186 ? THR A 179 LEU A 186 1 ? 8 HELX_P HELX_P5 AA5 SER A 210 ? ASP A 214 ? SER A 210 ASP A 214 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A CYS 149 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 149 A ZN 501 1_555 ? ? ? ? ? ? ? 2.385 ? metalc2 metalc ? ? A CYS 151 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 151 A ZN 501 1_555 ? ? ? ? ? ? ? 2.432 ? metalc3 metalc ? ? A CYS 164 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 164 A ZN 502 1_555 ? ? ? ? ? ? ? 2.529 ? metalc4 metalc ? ? A CYS 167 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 167 A ZN 502 1_555 ? ? ? ? ? ? ? 2.244 ? metalc5 metalc ? ? A HIS 172 ND1 ? ? ? 1_555 C ZN . ZN ? ? A HIS 172 A ZN 501 1_555 ? ? ? ? ? ? ? 2.200 ? metalc6 metalc ? ? A CYS 175 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 175 A ZN 501 1_555 ? ? ? ? ? ? ? 2.372 ? metalc7 metalc ? ? A CYS 191 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 191 A ZN 502 1_555 ? ? ? ? ? ? ? 2.304 ? metalc8 metalc ? ? A CYS 194 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 194 A ZN 502 1_555 ? ? ? ? ? ? ? 2.862 ? covale1 covale both ? B ARG 7 C ? ? ? 1_555 B M3L 8 N ? ? P ARG 26 P M3L 27 1_555 ? ? ? ? ? ? ? 1.314 ? covale2 covale both ? B M3L 8 C ? ? ? 1_555 B SER 9 N ? ? P M3L 27 P SER 28 1_555 ? ? ? ? ? ? ? 1.312 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id THR _struct_mon_prot_cis.label_seq_id 141 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id THR _struct_mon_prot_cis.auth_seq_id 141 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 142 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 142 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.69 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 8 ? AA3 ? 2 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel AA2 7 8 ? parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 22 ? THR A 23 ? TYR A 22 THR A 23 AA1 2 VAL A 30 ? VAL A 31 ? VAL A 30 VAL A 31 AA2 1 PHE A 140 ? THR A 141 ? PHE A 140 THR A 141 AA2 2 ASP A 126 ? TYR A 133 ? ASP A 126 TYR A 133 AA2 3 ILE A 104 ? THR A 112 ? ILE A 104 THR A 112 AA2 4 CYS A 36 ? MET A 39 ? CYS A 36 MET A 39 AA2 5 TYR A 49 ? ALA A 58 ? TYR A 49 ALA A 58 AA2 6 VAL A 64 ? TYR A 72 ? VAL A 64 TYR A 72 AA2 7 GLU A 89 ? SER A 100 ? GLU A 89 SER A 100 AA2 8 ASP A 126 ? TYR A 133 ? ASP A 126 TYR A 133 AA3 1 VAL A 145 ? ALA A 146 ? VAL A 145 ALA A 146 AA3 2 ARG A 218 ? LEU A 219 ? ARG A 218 LEU A 219 AA4 1 VAL A 162 ? GLN A 163 ? VAL A 162 GLN A 163 AA4 2 TRP A 170 ? TYR A 171 ? TRP A 170 TYR A 171 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TYR A 22 ? N TYR A 22 O VAL A 31 ? O VAL A 31 AA2 1 2 O THR A 141 ? O THR A 141 N GLU A 132 ? N GLU A 132 AA2 2 3 O TYR A 127 ? O TYR A 127 N ILE A 109 ? N ILE A 109 AA2 3 4 O GLY A 106 ? O GLY A 106 N LEU A 38 ? N LEU A 38 AA2 4 5 N VAL A 37 ? N VAL A 37 O ALA A 51 ? O ALA A 51 AA2 5 6 N GLU A 57 ? N GLU A 57 O LYS A 65 ? O LYS A 65 AA2 6 7 N CYS A 68 ? N CYS A 68 O ASP A 97 ? O ASP A 97 AA2 7 8 N LEU A 90 ? N LEU A 90 O TYR A 128 ? O TYR A 128 AA3 1 2 N VAL A 145 ? N VAL A 145 O LEU A 219 ? O LEU A 219 AA4 1 2 N VAL A 162 ? N VAL A 162 O TYR A 171 ? O TYR A 171 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 501 ? 4 'binding site for residue ZN A 501' AC2 Software A ZN 502 ? 4 'binding site for residue ZN A 502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 149 ? CYS A 149 . ? 1_555 ? 2 AC1 4 CYS A 151 ? CYS A 151 . ? 1_555 ? 3 AC1 4 HIS A 172 ? HIS A 172 . ? 1_555 ? 4 AC1 4 CYS A 175 ? CYS A 175 . ? 1_555 ? 5 AC2 4 CYS A 164 ? CYS A 164 . ? 1_555 ? 6 AC2 4 CYS A 167 ? CYS A 167 . ? 1_555 ? 7 AC2 4 CYS A 191 ? CYS A 191 . ? 1_555 ? 8 AC2 4 CYS A 194 ? CYS A 194 . ? 1_555 ? # _atom_sites.entry_id 5Z8L _atom_sites.fract_transf_matrix[1][1] 0.027588 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016584 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010200 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 PRO 6 6 6 PRO PRO A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 TYR 22 22 22 TYR TYR A . n A 1 23 THR 23 23 23 THR THR A . n A 1 24 ILE 24 24 24 ILE ILE A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 CYS 36 36 36 CYS CYS A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 MET 39 39 39 MET MET A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 PRO 48 48 48 PRO PRO A . n A 1 49 TYR 49 49 49 TYR TYR A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 ARG 61 61 ? ? ? A . n A 1 62 ASN 62 62 ? ? ? A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 HIS 67 67 67 HIS HIS A . n A 1 68 CYS 68 68 68 CYS CYS A . n A 1 69 ARG 69 69 69 ARG ARG A . n A 1 70 TRP 70 70 70 TRP TRP A . n A 1 71 TYR 71 71 71 TYR TYR A . n A 1 72 TYR 72 72 72 TYR TYR A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 ARG 81 81 81 ARG ARG A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 GLN 83 83 83 GLN GLN A . n A 1 84 PHE 84 84 84 PHE PHE A . n A 1 85 HIS 85 85 85 HIS HIS A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 LYS 88 88 88 LYS LYS A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 PHE 91 91 91 PHE PHE A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 HIS 95 95 95 HIS HIS A . n A 1 96 PHE 96 96 96 PHE PHE A . n A 1 97 ASP 97 97 97 ASP ASP A . n A 1 98 VAL 98 98 98 VAL VAL A . n A 1 99 GLN 99 99 99 GLN GLN A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 HIS 102 102 102 HIS HIS A . n A 1 103 THR 103 103 103 THR THR A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 CYS 108 108 108 CYS CYS A . n A 1 109 ILE 109 109 109 ILE ILE A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 HIS 111 111 111 HIS HIS A . n A 1 112 THR 112 112 112 THR THR A . n A 1 113 PHE 113 113 113 PHE PHE A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 ASN 115 115 115 ASN ASN A . n A 1 116 TYR 116 116 116 TYR TYR A . n A 1 117 THR 117 117 117 THR THR A . n A 1 118 ARG 118 118 118 ARG ARG A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 ASN 121 121 121 ASN ASN A . n A 1 122 VAL 122 122 122 VAL VAL A . n A 1 123 GLY 123 123 123 GLY GLY A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 GLU 125 125 125 GLU GLU A . n A 1 126 ASP 126 126 126 ASP ASP A . n A 1 127 TYR 127 127 127 TYR TYR A . n A 1 128 TYR 128 128 128 TYR TYR A . n A 1 129 CYS 129 129 129 CYS CYS A . n A 1 130 ARG 130 130 130 ARG ARG A . n A 1 131 PHE 131 131 131 PHE PHE A . n A 1 132 GLU 132 132 132 GLU GLU A . n A 1 133 TYR 133 133 133 TYR TYR A . n A 1 134 LYS 134 134 134 LYS LYS A . n A 1 135 ALA 135 135 135 ALA ALA A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 THR 137 137 137 THR THR A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 PHE 140 140 140 PHE PHE A . n A 1 141 THR 141 141 141 THR THR A . n A 1 142 PRO 142 142 142 PRO PRO A . n A 1 143 ASP 143 143 143 ASP ASP A . n A 1 144 ARG 144 144 144 ARG ARG A . n A 1 145 VAL 145 145 145 VAL VAL A . n A 1 146 ALA 146 146 146 ALA ALA A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 TYR 148 148 148 TYR TYR A . n A 1 149 CYS 149 149 149 CYS CYS A . n A 1 150 LYS 150 150 150 LYS LYS A . n A 1 151 CYS 151 151 151 CYS CYS A . n A 1 152 GLU 152 152 152 GLU GLU A . n A 1 153 MET 153 153 153 MET MET A . n A 1 154 PRO 154 154 154 PRO PRO A . n A 1 155 TYR 155 155 155 TYR TYR A . n A 1 156 ASN 156 156 156 ASN ASN A . n A 1 157 PRO 157 157 157 PRO PRO A . n A 1 158 ASP 158 158 158 ASP ASP A . n A 1 159 ASP 159 159 159 ASP ASP A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 MET 161 161 161 MET MET A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 GLN 163 163 163 GLN GLN A . n A 1 164 CYS 164 164 164 CYS CYS A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 GLY 166 166 166 GLY GLY A . n A 1 167 CYS 167 167 167 CYS CYS A . n A 1 168 LYS 168 168 168 LYS LYS A . n A 1 169 ASP 169 169 169 ASP ASP A . n A 1 170 TRP 170 170 170 TRP TRP A . n A 1 171 TYR 171 171 171 TYR TYR A . n A 1 172 HIS 172 172 172 HIS HIS A . n A 1 173 PRO 173 173 173 PRO PRO A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 CYS 175 175 175 CYS CYS A . n A 1 176 VAL 176 176 176 VAL VAL A . n A 1 177 GLY 177 177 177 GLY GLY A . n A 1 178 MET 178 178 178 MET MET A . n A 1 179 THR 179 179 179 THR THR A . n A 1 180 ILE 180 180 180 ILE ILE A . n A 1 181 GLU 181 181 181 GLU GLU A . n A 1 182 GLU 182 182 182 GLU GLU A . n A 1 183 ALA 183 183 183 ALA ALA A . n A 1 184 LYS 184 184 184 LYS LYS A . n A 1 185 LYS 185 185 185 LYS LYS A . n A 1 186 LEU 186 186 186 LEU LEU A . n A 1 187 ASP 187 187 187 ASP ASP A . n A 1 188 HIS 188 188 188 HIS HIS A . n A 1 189 PHE 189 189 189 PHE PHE A . n A 1 190 VAL 190 190 190 VAL VAL A . n A 1 191 CYS 191 191 191 CYS CYS A . n A 1 192 ALA 192 192 192 ALA ALA A . n A 1 193 GLU 193 193 193 GLU GLU A . n A 1 194 CYS 194 194 194 CYS CYS A . n A 1 195 SER 195 195 ? ? ? A . n A 1 196 SER 196 196 ? ? ? A . n A 1 197 ASP 197 197 ? ? ? A . n A 1 198 ASP 198 198 ? ? ? A . n A 1 199 ASP 199 199 ? ? ? A . n A 1 200 VAL 200 200 ? ? ? A . n A 1 201 ALA 201 201 ? ? ? A . n A 1 202 ALA 202 202 ? ? ? A . n A 1 203 SER 203 203 ? ? ? A . n A 1 204 GLN 204 204 ? ? ? A . n A 1 205 ASN 205 205 ? ? ? A . n A 1 206 GLY 206 206 ? ? ? A . n A 1 207 PHE 207 207 ? ? ? A . n A 1 208 THR 208 208 ? ? ? A . n A 1 209 SER 209 209 209 SER SER A . n A 1 210 SER 210 210 210 SER SER A . n A 1 211 PRO 211 211 211 PRO PRO A . n A 1 212 ALA 212 212 212 ALA ALA A . n A 1 213 ASP 213 213 213 ASP ASP A . n A 1 214 ASP 214 214 214 ASP ASP A . n A 1 215 VAL 215 215 215 VAL VAL A . n A 1 216 LYS 216 216 216 LYS LYS A . n A 1 217 VAL 217 217 217 VAL VAL A . n A 1 218 ARG 218 218 218 ARG ARG A . n A 1 219 LEU 219 219 219 LEU LEU A . n A 1 220 SER 220 220 220 SER SER A . n A 1 221 LEU 221 221 ? ? ? A . n A 1 222 PHE 222 222 ? ? ? A . n A 1 223 SER 223 223 ? ? ? A . n A 1 224 HIS 224 224 ? ? ? A . n A 1 225 LEU 225 225 ? ? ? A . n A 1 226 LEU 226 226 ? ? ? A . n A 1 227 TYR 227 227 ? ? ? A . n A 1 228 ARG 228 228 ? ? ? A . n A 1 229 CYS 229 229 ? ? ? A . n A 1 230 SER 230 230 ? ? ? A . n A 1 231 ILE 231 231 ? ? ? A . n A 1 232 THR 232 232 ? ? ? A . n A 1 233 TYR 233 233 ? ? ? A . n A 1 234 LEU 234 234 ? ? ? A . n B 2 1 LEU 1 20 ? ? ? P . n B 2 2 ALA 2 21 ? ? ? P . n B 2 3 THR 3 22 ? ? ? P . n B 2 4 LYS 4 23 23 LYS LYS P . n B 2 5 ALA 5 24 24 ALA ALA P . n B 2 6 ALA 6 25 25 ALA ALA P . n B 2 7 ARG 7 26 26 ARG ARG P . n B 2 8 M3L 8 27 27 M3L M3L P . n B 2 9 SER 9 28 28 SER SER P . n B 2 10 ALA 10 29 29 ALA ALA P . n B 2 11 PRO 11 30 30 PRO PRO P . n B 2 12 ALA 12 31 ? ? ? P . n B 2 13 THR 13 32 ? ? ? P . n B 2 14 GLY 14 33 ? ? ? P . n B 2 15 GLY 15 34 ? ? ? P . n B 2 16 VAL 16 35 ? ? ? P . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 501 501 ZN ZN A . D 3 ZN 1 502 502 ZN ZN A . E 4 HOH 1 601 88 HOH HOH A . E 4 HOH 2 602 69 HOH HOH A . E 4 HOH 3 603 30 HOH HOH A . E 4 HOH 4 604 34 HOH HOH A . E 4 HOH 5 605 64 HOH HOH A . E 4 HOH 6 606 77 HOH HOH A . E 4 HOH 7 607 61 HOH HOH A . E 4 HOH 8 608 79 HOH HOH A . E 4 HOH 9 609 63 HOH HOH A . E 4 HOH 10 610 49 HOH HOH A . E 4 HOH 11 611 25 HOH HOH A . E 4 HOH 12 612 43 HOH HOH A . E 4 HOH 13 613 14 HOH HOH A . E 4 HOH 14 614 84 HOH HOH A . E 4 HOH 15 615 100 HOH HOH A . E 4 HOH 16 616 40 HOH HOH A . E 4 HOH 17 617 44 HOH HOH A . E 4 HOH 18 618 82 HOH HOH A . E 4 HOH 19 619 50 HOH HOH A . E 4 HOH 20 620 60 HOH HOH A . E 4 HOH 21 621 6 HOH HOH A . E 4 HOH 22 622 45 HOH HOH A . E 4 HOH 23 623 24 HOH HOH A . E 4 HOH 24 624 10 HOH HOH A . E 4 HOH 25 625 56 HOH HOH A . E 4 HOH 26 626 3 HOH HOH A . E 4 HOH 27 627 46 HOH HOH A . E 4 HOH 28 628 31 HOH HOH A . E 4 HOH 29 629 16 HOH HOH A . E 4 HOH 30 630 1 HOH HOH A . E 4 HOH 31 631 58 HOH HOH A . E 4 HOH 32 632 41 HOH HOH A . E 4 HOH 33 633 51 HOH HOH A . E 4 HOH 34 634 2 HOH HOH A . E 4 HOH 35 635 102 HOH HOH A . E 4 HOH 36 636 5 HOH HOH A . E 4 HOH 37 637 8 HOH HOH A . E 4 HOH 38 638 85 HOH HOH A . E 4 HOH 39 639 4 HOH HOH A . E 4 HOH 40 640 48 HOH HOH A . E 4 HOH 41 641 15 HOH HOH A . E 4 HOH 42 642 35 HOH HOH A . E 4 HOH 43 643 80 HOH HOH A . E 4 HOH 44 644 33 HOH HOH A . E 4 HOH 45 645 27 HOH HOH A . E 4 HOH 46 646 42 HOH HOH A . E 4 HOH 47 647 26 HOH HOH A . E 4 HOH 48 648 76 HOH HOH A . E 4 HOH 49 649 81 HOH HOH A . E 4 HOH 50 650 36 HOH HOH A . E 4 HOH 51 651 107 HOH HOH A . E 4 HOH 52 652 53 HOH HOH A . E 4 HOH 53 653 65 HOH HOH A . E 4 HOH 54 654 7 HOH HOH A . E 4 HOH 55 655 38 HOH HOH A . E 4 HOH 56 656 28 HOH HOH A . E 4 HOH 57 657 19 HOH HOH A . E 4 HOH 58 658 23 HOH HOH A . E 4 HOH 59 659 29 HOH HOH A . E 4 HOH 60 660 21 HOH HOH A . E 4 HOH 61 661 9 HOH HOH A . E 4 HOH 62 662 13 HOH HOH A . E 4 HOH 63 663 12 HOH HOH A . E 4 HOH 64 664 70 HOH HOH A . E 4 HOH 65 665 11 HOH HOH A . E 4 HOH 66 666 22 HOH HOH A . E 4 HOH 67 667 73 HOH HOH A . E 4 HOH 68 668 105 HOH HOH A . E 4 HOH 69 669 99 HOH HOH A . E 4 HOH 70 670 67 HOH HOH A . E 4 HOH 71 671 62 HOH HOH A . E 4 HOH 72 672 55 HOH HOH A . E 4 HOH 73 673 20 HOH HOH A . E 4 HOH 74 674 18 HOH HOH A . E 4 HOH 75 675 68 HOH HOH A . E 4 HOH 76 676 71 HOH HOH A . E 4 HOH 77 677 54 HOH HOH A . E 4 HOH 78 678 86 HOH HOH A . E 4 HOH 79 679 57 HOH HOH A . E 4 HOH 80 680 52 HOH HOH A . E 4 HOH 81 681 47 HOH HOH A . E 4 HOH 82 682 32 HOH HOH A . E 4 HOH 83 683 108 HOH HOH A . E 4 HOH 84 684 83 HOH HOH A . E 4 HOH 85 685 98 HOH HOH A . E 4 HOH 86 686 87 HOH HOH A . E 4 HOH 87 687 97 HOH HOH A . E 4 HOH 88 688 74 HOH HOH A . E 4 HOH 89 689 66 HOH HOH A . E 4 HOH 90 690 89 HOH HOH A . E 4 HOH 91 691 17 HOH HOH A . E 4 HOH 92 692 72 HOH HOH A . E 4 HOH 93 693 90 HOH HOH A . E 4 HOH 94 694 75 HOH HOH A . E 4 HOH 95 695 78 HOH HOH A . E 4 HOH 96 696 92 HOH HOH A . E 4 HOH 97 697 39 HOH HOH A . E 4 HOH 98 698 95 HOH HOH A . E 4 HOH 99 699 104 HOH HOH A . E 4 HOH 100 700 59 HOH HOH A . E 4 HOH 101 701 37 HOH HOH A . E 4 HOH 102 702 96 HOH HOH A . E 4 HOH 103 703 94 HOH HOH A . E 4 HOH 104 704 93 HOH HOH A . E 4 HOH 105 705 103 HOH HOH A . E 4 HOH 106 706 101 HOH HOH A . F 4 HOH 1 101 91 HOH HOH P . F 4 HOH 2 102 106 HOH HOH P . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id M3L _pdbx_struct_mod_residue.label_seq_id 8 _pdbx_struct_mod_residue.auth_asym_id P _pdbx_struct_mod_residue.auth_comp_id M3L _pdbx_struct_mod_residue.auth_seq_id 27 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LYS _pdbx_struct_mod_residue.details 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1110 ? 1 MORE -8 ? 1 'SSA (A^2)' 12860 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 149 ? A CYS 149 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 SG ? A CYS 151 ? A CYS 151 ? 1_555 112.3 ? 2 SG ? A CYS 149 ? A CYS 149 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 ND1 ? A HIS 172 ? A HIS 172 ? 1_555 100.3 ? 3 SG ? A CYS 151 ? A CYS 151 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 ND1 ? A HIS 172 ? A HIS 172 ? 1_555 97.4 ? 4 SG ? A CYS 149 ? A CYS 149 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 SG ? A CYS 175 ? A CYS 175 ? 1_555 104.2 ? 5 SG ? A CYS 151 ? A CYS 151 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 SG ? A CYS 175 ? A CYS 175 ? 1_555 122.9 ? 6 ND1 ? A HIS 172 ? A HIS 172 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 SG ? A CYS 175 ? A CYS 175 ? 1_555 117.8 ? 7 SG ? A CYS 164 ? A CYS 164 ? 1_555 ZN ? D ZN . ? A ZN 502 ? 1_555 SG ? A CYS 167 ? A CYS 167 ? 1_555 94.3 ? 8 SG ? A CYS 164 ? A CYS 164 ? 1_555 ZN ? D ZN . ? A ZN 502 ? 1_555 SG ? A CYS 191 ? A CYS 191 ? 1_555 123.2 ? 9 SG ? A CYS 167 ? A CYS 167 ? 1_555 ZN ? D ZN . ? A ZN 502 ? 1_555 SG ? A CYS 191 ? A CYS 191 ? 1_555 101.5 ? 10 SG ? A CYS 164 ? A CYS 164 ? 1_555 ZN ? D ZN . ? A ZN 502 ? 1_555 SG ? A CYS 194 ? A CYS 194 ? 1_555 90.6 ? 11 SG ? A CYS 167 ? A CYS 167 ? 1_555 ZN ? D ZN . ? A ZN 502 ? 1_555 SG ? A CYS 194 ? A CYS 194 ? 1_555 80.9 ? 12 SG ? A CYS 191 ? A CYS 191 ? 1_555 ZN ? D ZN . ? A ZN 502 ? 1_555 SG ? A CYS 194 ? A CYS 194 ? 1_555 145.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-07-25 2 'Structure model' 1 1 2018-09-19 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 12.2956 37.1775 39.2568 0.2635 0.3245 0.2807 -0.0517 0.0053 -0.0732 2.6126 4.2910 5.9689 -0.0842 0.1551 -0.9635 0.2327 -0.3226 -0.0490 0.1652 -0.1181 0.2883 0.1572 -0.5464 -0.1803 'X-RAY DIFFRACTION' 2 ? refined 29.9698 33.2904 24.2584 0.2113 0.1408 0.1607 0.0209 -0.0507 0.0060 5.6628 1.4308 2.8242 0.5579 -2.1564 0.4986 0.0881 0.2300 -0.0239 -0.0367 -0.0647 -0.0333 0.0104 -0.1077 -0.0353 'X-RAY DIFFRACTION' 3 ? refined 37.7467 38.2784 10.1989 1.1383 0.6774 0.6476 0.0054 0.2153 0.1050 3.3261 2.1644 4.1302 0.8820 3.2821 0.8923 -0.0470 -0.7791 0.1519 -0.9758 0.6822 0.2104 -0.7317 1.5069 -0.6131 'X-RAY DIFFRACTION' 4 ? refined 27.8280 33.3650 8.7877 1.1923 1.2586 1.0376 0.1039 -0.1373 -0.2555 0.4417 0.0452 0.1075 -0.1302 0.2177 -0.0661 -0.2720 0.1441 0.0354 -0.0349 -0.1002 0.1100 -0.2345 -0.0808 0.3005 'X-RAY DIFFRACTION' 5 ? refined 16.2609 23.9282 41.9838 0.8914 0.5458 0.4594 -0.1887 -0.0258 0.0797 2.5200 2.2640 6.1233 0.9443 1.6450 3.7214 0.5711 -0.8158 -0.3203 1.6448 -0.8547 -0.0355 0.6159 -0.8704 0.3137 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 1 through 63 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 64 through 191 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 192 through 213 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 214 through 220 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'P' and (resid 23 through 30 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 59 ? ? -122.83 -161.74 2 1 CYS A 149 ? ? 78.04 179.92 3 1 LYS A 216 ? ? -157.04 -102.79 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 706 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.67 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 61 ? A ARG 61 2 1 Y 1 A ASN 62 ? A ASN 62 3 1 Y 1 A SER 195 ? A SER 195 4 1 Y 1 A SER 196 ? A SER 196 5 1 Y 1 A ASP 197 ? A ASP 197 6 1 Y 1 A ASP 198 ? A ASP 198 7 1 Y 1 A ASP 199 ? A ASP 199 8 1 Y 1 A VAL 200 ? A VAL 200 9 1 Y 1 A ALA 201 ? A ALA 201 10 1 Y 1 A ALA 202 ? A ALA 202 11 1 Y 1 A SER 203 ? A SER 203 12 1 Y 1 A GLN 204 ? A GLN 204 13 1 Y 1 A ASN 205 ? A ASN 205 14 1 Y 1 A GLY 206 ? A GLY 206 15 1 Y 1 A PHE 207 ? A PHE 207 16 1 Y 1 A THR 208 ? A THR 208 17 1 Y 1 A LEU 221 ? A LEU 221 18 1 Y 1 A PHE 222 ? A PHE 222 19 1 Y 1 A SER 223 ? A SER 223 20 1 Y 1 A HIS 224 ? A HIS 224 21 1 Y 1 A LEU 225 ? A LEU 225 22 1 Y 1 A LEU 226 ? A LEU 226 23 1 Y 1 A TYR 227 ? A TYR 227 24 1 Y 1 A ARG 228 ? A ARG 228 25 1 Y 1 A CYS 229 ? A CYS 229 26 1 Y 1 A SER 230 ? A SER 230 27 1 Y 1 A ILE 231 ? A ILE 231 28 1 Y 1 A THR 232 ? A THR 232 29 1 Y 1 A TYR 233 ? A TYR 233 30 1 Y 1 A LEU 234 ? A LEU 234 31 1 Y 1 P LEU 20 ? B LEU 1 32 1 Y 1 P ALA 21 ? B ALA 2 33 1 Y 1 P THR 22 ? B THR 3 34 1 Y 1 P ALA 31 ? B ALA 12 35 1 Y 1 P THR 32 ? B THR 13 36 1 Y 1 P GLY 33 ? B GLY 14 37 1 Y 1 P GLY 34 ? B GLY 15 38 1 Y 1 P VAL 35 ? B VAL 16 # _pdbx_audit_support.funding_organization 'Ministry of Science and Technology (China)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 2016YFA0503200 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #