data_5ZDG # _entry.id 5ZDG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.323 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5ZDG WWPDB D_1300005631 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5ZDG _pdbx_database_status.recvd_initial_deposition_date 2018-02-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Cho, C.C.' 1 ? 'Hsu, C.H.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 10 _citation.language ? _citation.page_first 1491 _citation.page_last 1491 _citation.title 'Structural and biochemical evidence supporting poly ADP-ribosylation in the bacterium Deinococcus radiodurans.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-019-09153-6 _citation.pdbx_database_id_PubMed 30940816 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cho, C.C.' 1 ? primary 'Chien, C.Y.' 2 ? primary 'Chiu, Y.C.' 3 ? primary 'Lin, M.H.' 4 ? primary 'Hsu, C.H.' 5 0000-0002-0008-7383 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 5ZDG _cell.details ? _cell.formula_units_Z ? _cell.length_a 63.044 _cell.length_a_esd ? _cell.length_b 63.044 _cell.length_b_esd ? _cell.length_c 130.976 _cell.length_c_esd ? _cell.volume 450826.956 _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZDG _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ;P 32 2" ; _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Poly APD-ribose glycohydrolase' 27445.988 1 ? ? ? ? 2 non-polymer syn ;[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE ; 559.316 1 ? ? ? ? 3 water nat water 18.015 8 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;VRLPGLAAMRQGTRLFTPEQGEDLREALRRRRGSFQTTCEVTSETTFAAARRLREKASALAALNFASAKNPGGGFLGGAQ AQEEDLCRGSGLYFSLTSPQAEPYYAVNRQSHSALYTDHLIYSPQVPIFRDDAGQLLPAPVPVNIITAPAPNAGAVAQSR PEQLPQVLPTLRERARRVLGVAAWMEQTHLVLGAWGCGVFRNDPAGVARTFRELLEGEAQGAFEHVTFAVLDNHPQHPRL GAFRRELESLC ; _entity_poly.pdbx_seq_one_letter_code_can ;VRLPGLAAMRQGTRLFTPEQGEDLREALRRRRGSFQTTCEVTSETTFAAARRLREKASALAALNFASAKNPGGGFLGGAQ AQEEDLCRGSGLYFSLTSPQAEPYYAVNRQSHSALYTDHLIYSPQVPIFRDDAGQLLPAPVPVNIITAPAPNAGAVAQSR PEQLPQVLPTLRERARRVLGVAAWMEQTHLVLGAWGCGVFRNDPAGVARTFRELLEGEAQGAFEHVTFAVLDNHPQHPRL GAFRRELESLC ; _entity_poly.pdbx_strand_id C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 ARG n 1 3 LEU n 1 4 PRO n 1 5 GLY n 1 6 LEU n 1 7 ALA n 1 8 ALA n 1 9 MET n 1 10 ARG n 1 11 GLN n 1 12 GLY n 1 13 THR n 1 14 ARG n 1 15 LEU n 1 16 PHE n 1 17 THR n 1 18 PRO n 1 19 GLU n 1 20 GLN n 1 21 GLY n 1 22 GLU n 1 23 ASP n 1 24 LEU n 1 25 ARG n 1 26 GLU n 1 27 ALA n 1 28 LEU n 1 29 ARG n 1 30 ARG n 1 31 ARG n 1 32 ARG n 1 33 GLY n 1 34 SER n 1 35 PHE n 1 36 GLN n 1 37 THR n 1 38 THR n 1 39 CYS n 1 40 GLU n 1 41 VAL n 1 42 THR n 1 43 SER n 1 44 GLU n 1 45 THR n 1 46 THR n 1 47 PHE n 1 48 ALA n 1 49 ALA n 1 50 ALA n 1 51 ARG n 1 52 ARG n 1 53 LEU n 1 54 ARG n 1 55 GLU n 1 56 LYS n 1 57 ALA n 1 58 SER n 1 59 ALA n 1 60 LEU n 1 61 ALA n 1 62 ALA n 1 63 LEU n 1 64 ASN n 1 65 PHE n 1 66 ALA n 1 67 SER n 1 68 ALA n 1 69 LYS n 1 70 ASN n 1 71 PRO n 1 72 GLY n 1 73 GLY n 1 74 GLY n 1 75 PHE n 1 76 LEU n 1 77 GLY n 1 78 GLY n 1 79 ALA n 1 80 GLN n 1 81 ALA n 1 82 GLN n 1 83 GLU n 1 84 GLU n 1 85 ASP n 1 86 LEU n 1 87 CYS n 1 88 ARG n 1 89 GLY n 1 90 SER n 1 91 GLY n 1 92 LEU n 1 93 TYR n 1 94 PHE n 1 95 SER n 1 96 LEU n 1 97 THR n 1 98 SER n 1 99 PRO n 1 100 GLN n 1 101 ALA n 1 102 GLU n 1 103 PRO n 1 104 TYR n 1 105 TYR n 1 106 ALA n 1 107 VAL n 1 108 ASN n 1 109 ARG n 1 110 GLN n 1 111 SER n 1 112 HIS n 1 113 SER n 1 114 ALA n 1 115 LEU n 1 116 TYR n 1 117 THR n 1 118 ASP n 1 119 HIS n 1 120 LEU n 1 121 ILE n 1 122 TYR n 1 123 SER n 1 124 PRO n 1 125 GLN n 1 126 VAL n 1 127 PRO n 1 128 ILE n 1 129 PHE n 1 130 ARG n 1 131 ASP n 1 132 ASP n 1 133 ALA n 1 134 GLY n 1 135 GLN n 1 136 LEU n 1 137 LEU n 1 138 PRO n 1 139 ALA n 1 140 PRO n 1 141 VAL n 1 142 PRO n 1 143 VAL n 1 144 ASN n 1 145 ILE n 1 146 ILE n 1 147 THR n 1 148 ALA n 1 149 PRO n 1 150 ALA n 1 151 PRO n 1 152 ASN n 1 153 ALA n 1 154 GLY n 1 155 ALA n 1 156 VAL n 1 157 ALA n 1 158 GLN n 1 159 SER n 1 160 ARG n 1 161 PRO n 1 162 GLU n 1 163 GLN n 1 164 LEU n 1 165 PRO n 1 166 GLN n 1 167 VAL n 1 168 LEU n 1 169 PRO n 1 170 THR n 1 171 LEU n 1 172 ARG n 1 173 GLU n 1 174 ARG n 1 175 ALA n 1 176 ARG n 1 177 ARG n 1 178 VAL n 1 179 LEU n 1 180 GLY n 1 181 VAL n 1 182 ALA n 1 183 ALA n 1 184 TRP n 1 185 MET n 1 186 GLU n 1 187 GLN n 1 188 THR n 1 189 HIS n 1 190 LEU n 1 191 VAL n 1 192 LEU n 1 193 GLY n 1 194 ALA n 1 195 TRP n 1 196 GLY n 1 197 CYS n 1 198 GLY n 1 199 VAL n 1 200 PHE n 1 201 ARG n 1 202 ASN n 1 203 ASP n 1 204 PRO n 1 205 ALA n 1 206 GLY n 1 207 VAL n 1 208 ALA n 1 209 ARG n 1 210 THR n 1 211 PHE n 1 212 ARG n 1 213 GLU n 1 214 LEU n 1 215 LEU n 1 216 GLU n 1 217 GLY n 1 218 GLU n 1 219 ALA n 1 220 GLN n 1 221 GLY n 1 222 ALA n 1 223 PHE n 1 224 GLU n 1 225 HIS n 1 226 VAL n 1 227 THR n 1 228 PHE n 1 229 ALA n 1 230 VAL n 1 231 LEU n 1 232 ASP n 1 233 ASN n 1 234 HIS n 1 235 PRO n 1 236 GLN n 1 237 HIS n 1 238 PRO n 1 239 ARG n 1 240 LEU n 1 241 GLY n 1 242 ALA n 1 243 PHE n 1 244 ARG n 1 245 ARG n 1 246 GLU n 1 247 LEU n 1 248 GLU n 1 249 SER n 1 250 LEU n 1 251 CYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 251 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene DR_B0099 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 243230 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9RZM4_DEIRA _struct_ref.pdbx_db_accession Q9RZM4 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VRLPGLAAMRQGTRLFTPEQGEDLREALRRRRGSFQTTCEVTSETTFAAARRLREKASALAALNFASAKNPGGGFLGGAQ AQEEDLCRGSGLYFSLTSPQAEPYYAVNRQSHSALYTDHLIYSPQVPIFRDDAGQLLPAPVPVNIITAPAPNAGAVAQSR PEQLPQVLPTLRERARRVLGVAAWMEQTHLVLGAWGCGVFRNDPAGVARTFRELLEGEAQGAFEHVTFAVLDNHPQHPTL GAFRRELESLC ; _struct_ref.pdbx_align_begin 29 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5ZDG _struct_ref_seq.pdbx_strand_id C _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 251 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9RZM4 _struct_ref_seq.db_align_beg 29 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 279 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 29 _struct_ref_seq.pdbx_auth_seq_align_end 279 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 5ZDG _struct_ref_seq_dif.mon_id ARG _struct_ref_seq_dif.pdbx_pdb_strand_id C _struct_ref_seq_dif.seq_num 239 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9RZM4 _struct_ref_seq_dif.db_mon_id THR _struct_ref_seq_dif.pdbx_seq_db_seq_num 267 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 267 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 AR6 non-polymer . ;[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE ; Adenosine-5-Diphosphoribose 'C15 H23 N5 O14 P2' 559.316 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5ZDG _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.76 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 55.44 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 283 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.1 M Sodium citrate tribasic dihydrate pH 5.6, 20 % 2-Propanol, 20% Polyethylene glycol 4000, 10 mM Hexammine cobalt (lll) chloride ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX300-HS' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-10-03 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.99984 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSRRC BEAMLINE TPS 05A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.99984 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'TPS 05A' _diffrn_source.pdbx_synchrotron_site NSRRC # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5ZDG _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.59375 _reflns.d_resolution_low 28.4029 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8901 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.3 _reflns.pdbx_Rmerge_I_obs 0.054 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 29.840 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3.53 _reflns_shell.d_res_low 3.88 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.579 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 51.4907629656 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5ZDG _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.594 _refine.ls_d_res_low 28.4029 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8901 _refine.ls_number_reflns_R_free 1195 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 66.0402461334 _refine.ls_percent_reflns_R_free 10.0310585075 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.192261801375 _refine.ls_R_factor_R_free 0.251134062422 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.185624568988 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34358811396 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 26.5266437295 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.239169240224 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1917 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 8 _refine_hist.number_atoms_total 1961 _refine_hist.d_res_high 2.594 _refine_hist.d_res_low 28.4029 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.00872845740745 ? 2000 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.02580858637 ? 2722 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0525361158797 ? 297 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.00575047750897 ? 362 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 7.7433443016 ? 1190 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.5938 2.6975 . . 45 447 24.9366447035 . . . 0.349744427322 . 0.245941913354 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6975 2.8202 . . 85 705 38.9546351085 . . . 0.28379683264 . 0.22942601398 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8202 2.9687 . . 105 1008 55.9296482412 . . . 0.311650950725 . 0.244791513002 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9687 3.1545 . . 128 1099 59.8536585366 . . . 0.281596793041 . 0.253232446748 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1545 3.3977 . . 129 1097 62.5510204082 . . . 0.30151138311 . 0.218669335667 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.3977 3.7389 . . 130 1207 66.024691358 . . . 0.251666387424 . 0.205626997707 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.7389 4.2784 . . 162 1564 86.4296444667 . . . 0.243897765298 . 0.155804237209 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.2784 5.3843 . . 204 1793 99.7502497502 . . . 0.231068704315 . 0.161273430885 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.3843 28.4046 . . 207 1798 99.7512437811 . . . 0.232319673517 . 0.176023650864 . . . . . . . . . . # _struct.entry_id 5ZDG _struct.title 'Crystal structure of poly(ADP-ribose) glycohydrolase (PARG) T267R mutant from Deinococcus radiodurans in complex with ADP-ribose' _struct.pdbx_descriptor 'Poly APD-ribose glycohydrolase' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5ZDG _struct_keywords.text 'ADP-ribose, Poly(ADP-ribose) Glycohydrolase, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 5 ? THR A 13 ? GLY C 33 THR C 41 1 ? 9 HELX_P HELX_P2 AA2 THR A 17 ? GLU A 19 ? THR C 45 GLU C 47 5 ? 3 HELX_P HELX_P3 AA3 GLN A 20 ? ARG A 32 ? GLN C 48 ARG C 60 1 ? 13 HELX_P HELX_P4 AA4 THR A 45 ? ARG A 54 ? THR C 73 ARG C 82 1 ? 10 HELX_P HELX_P5 AA5 GLU A 55 ? ALA A 57 ? GLU C 83 ALA C 85 5 ? 3 HELX_P HELX_P6 AA6 ASN A 70 ? PHE A 75 ? ASN C 98 PHE C 103 5 ? 6 HELX_P HELX_P7 AA7 ALA A 81 ? SER A 90 ? ALA C 109 SER C 118 1 ? 10 HELX_P HELX_P8 AA8 GLY A 91 ? THR A 97 ? GLY C 119 THR C 125 1 ? 7 HELX_P HELX_P9 AA9 SER A 98 ? GLN A 100 ? SER C 126 GLN C 128 5 ? 3 HELX_P HELX_P10 AB1 ALA A 101 ? HIS A 112 ? ALA C 129 HIS C 140 1 ? 12 HELX_P HELX_P11 AB2 ASN A 152 ? ARG A 160 ? ASN C 180 ARG C 188 1 ? 9 HELX_P HELX_P12 AB3 PRO A 161 ? PRO A 165 ? PRO C 189 PRO C 193 5 ? 5 HELX_P HELX_P13 AB4 GLN A 166 ? MET A 185 ? GLN C 194 MET C 213 1 ? 20 HELX_P HELX_P14 AB5 ASP A 203 ? GLY A 217 ? ASP C 231 GLY C 245 1 ? 15 HELX_P HELX_P15 AB6 HIS A 237 ? LEU A 247 ? HIS C 265 LEU C 275 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag none _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id GLY _struct_conn.ptnr1_label_seq_id 196 _struct_conn.ptnr1_label_atom_id CA _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id AR6 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id O2B _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id C _struct_conn.ptnr1_auth_comp_id GLY _struct_conn.ptnr1_auth_seq_id 224 _struct_conn.ptnr2_auth_asym_id C _struct_conn.ptnr2_auth_comp_id AR6 _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.380 _struct_conn.pdbx_value_order ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA1 6 7 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ARG A 14 ? PHE A 16 ? ARG C 42 PHE C 44 AA1 2 LEU A 120 ? ARG A 130 ? LEU C 148 ARG C 158 AA1 3 LEU A 136 ? ALA A 148 ? LEU C 164 ALA C 176 AA1 4 LEU A 60 ? PHE A 65 ? LEU C 88 PHE C 93 AA1 5 HIS A 189 ? LEU A 192 ? HIS C 217 LEU C 220 AA1 6 HIS A 225 ? ALA A 229 ? HIS C 253 ALA C 257 AA1 7 THR A 38 ? THR A 42 ? THR C 66 THR C 70 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ARG A 14 ? N ARG C 42 O TYR A 122 ? O TYR C 150 AA1 2 3 N ILE A 121 ? N ILE C 149 O THR A 147 ? O THR C 175 AA1 3 4 O ILE A 146 ? O ILE C 174 N ASN A 64 ? N ASN C 92 AA1 4 5 N ALA A 61 ? N ALA C 89 O HIS A 189 ? O HIS C 217 AA1 5 6 N LEU A 192 ? N LEU C 220 O THR A 227 ? O THR C 255 AA1 6 7 O PHE A 228 ? O PHE C 256 N THR A 42 ? N THR C 70 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id C _struct_site.pdbx_auth_comp_id AR6 _struct_site.pdbx_auth_seq_id 301 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 19 _struct_site.details 'binding site for residue AR6 C 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 19 THR A 45 ? THR C 73 . ? 1_555 ? 2 AC1 19 THR A 46 ? THR C 74 . ? 1_555 ? 3 AC1 19 PHE A 65 ? PHE C 93 . ? 1_555 ? 4 AC1 19 SER A 67 ? SER C 95 . ? 1_555 ? 5 AC1 19 GLY A 73 ? GLY C 101 . ? 1_555 ? 6 AC1 19 ALA A 81 ? ALA C 109 . ? 1_555 ? 7 AC1 19 GLN A 82 ? GLN C 110 . ? 1_555 ? 8 AC1 19 GLU A 83 ? GLU C 111 . ? 1_555 ? 9 AC1 19 ASP A 85 ? ASP C 113 . ? 1_555 ? 10 AC1 19 ALA A 194 ? ALA C 222 . ? 1_555 ? 11 AC1 19 TRP A 195 ? TRP C 223 . ? 1_555 ? 12 AC1 19 GLY A 196 ? GLY C 224 . ? 1_555 ? 13 AC1 19 CYS A 197 ? CYS C 225 . ? 1_555 ? 14 AC1 19 GLY A 198 ? GLY C 226 . ? 1_555 ? 15 AC1 19 VAL A 199 ? VAL C 227 . ? 1_555 ? 16 AC1 19 PHE A 200 ? PHE C 228 . ? 1_555 ? 17 AC1 19 ALA A 229 ? ALA C 257 . ? 1_555 ? 18 AC1 19 LEU A 231 ? LEU C 259 . ? 1_555 ? 19 AC1 19 ARG A 239 ? ARG C 267 . ? 1_555 ? # _atom_sites.entry_id 5ZDG _atom_sites.fract_transf_matrix[1][1] 0.015862 _atom_sites.fract_transf_matrix[1][2] 0.009158 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018316 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007635 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 25.62398 1.50364 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 19.97189 1.75589 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 15.80542 1.70748 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 1.42069 35.72801 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 1.23737 29.19336 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 29 29 VAL VAL C . n A 1 2 ARG 2 30 30 ARG ARG C . n A 1 3 LEU 3 31 31 LEU LEU C . n A 1 4 PRO 4 32 32 PRO PRO C . n A 1 5 GLY 5 33 33 GLY GLY C . n A 1 6 LEU 6 34 34 LEU LEU C . n A 1 7 ALA 7 35 35 ALA ALA C . n A 1 8 ALA 8 36 36 ALA ALA C . n A 1 9 MET 9 37 37 MET MET C . n A 1 10 ARG 10 38 38 ARG ARG C . n A 1 11 GLN 11 39 39 GLN GLN C . n A 1 12 GLY 12 40 40 GLY GLY C . n A 1 13 THR 13 41 41 THR THR C . n A 1 14 ARG 14 42 42 ARG ARG C . n A 1 15 LEU 15 43 43 LEU LEU C . n A 1 16 PHE 16 44 44 PHE PHE C . n A 1 17 THR 17 45 45 THR THR C . n A 1 18 PRO 18 46 46 PRO PRO C . n A 1 19 GLU 19 47 47 GLU GLU C . n A 1 20 GLN 20 48 48 GLN GLN C . n A 1 21 GLY 21 49 49 GLY GLY C . n A 1 22 GLU 22 50 50 GLU GLU C . n A 1 23 ASP 23 51 51 ASP ASP C . n A 1 24 LEU 24 52 52 LEU LEU C . n A 1 25 ARG 25 53 53 ARG ARG C . n A 1 26 GLU 26 54 54 GLU GLU C . n A 1 27 ALA 27 55 55 ALA ALA C . n A 1 28 LEU 28 56 56 LEU LEU C . n A 1 29 ARG 29 57 57 ARG ARG C . n A 1 30 ARG 30 58 58 ARG ARG C . n A 1 31 ARG 31 59 59 ARG ARG C . n A 1 32 ARG 32 60 60 ARG ARG C . n A 1 33 GLY 33 61 61 GLY GLY C . n A 1 34 SER 34 62 62 SER SER C . n A 1 35 PHE 35 63 63 PHE PHE C . n A 1 36 GLN 36 64 64 GLN GLN C . n A 1 37 THR 37 65 65 THR THR C . n A 1 38 THR 38 66 66 THR THR C . n A 1 39 CYS 39 67 67 CYS CYS C . n A 1 40 GLU 40 68 68 GLU GLU C . n A 1 41 VAL 41 69 69 VAL VAL C . n A 1 42 THR 42 70 70 THR THR C . n A 1 43 SER 43 71 71 SER SER C . n A 1 44 GLU 44 72 72 GLU GLU C . n A 1 45 THR 45 73 73 THR THR C . n A 1 46 THR 46 74 74 THR THR C . n A 1 47 PHE 47 75 75 PHE PHE C . n A 1 48 ALA 48 76 76 ALA ALA C . n A 1 49 ALA 49 77 77 ALA ALA C . n A 1 50 ALA 50 78 78 ALA ALA C . n A 1 51 ARG 51 79 79 ARG ARG C . n A 1 52 ARG 52 80 80 ARG ARG C . n A 1 53 LEU 53 81 81 LEU LEU C . n A 1 54 ARG 54 82 82 ARG ARG C . n A 1 55 GLU 55 83 83 GLU GLU C . n A 1 56 LYS 56 84 84 LYS LYS C . n A 1 57 ALA 57 85 85 ALA ALA C . n A 1 58 SER 58 86 86 SER SER C . n A 1 59 ALA 59 87 87 ALA ALA C . n A 1 60 LEU 60 88 88 LEU LEU C . n A 1 61 ALA 61 89 89 ALA ALA C . n A 1 62 ALA 62 90 90 ALA ALA C . n A 1 63 LEU 63 91 91 LEU LEU C . n A 1 64 ASN 64 92 92 ASN ASN C . n A 1 65 PHE 65 93 93 PHE PHE C . n A 1 66 ALA 66 94 94 ALA ALA C . n A 1 67 SER 67 95 95 SER SER C . n A 1 68 ALA 68 96 96 ALA ALA C . n A 1 69 LYS 69 97 97 LYS LYS C . n A 1 70 ASN 70 98 98 ASN ASN C . n A 1 71 PRO 71 99 99 PRO PRO C . n A 1 72 GLY 72 100 100 GLY GLY C . n A 1 73 GLY 73 101 101 GLY GLY C . n A 1 74 GLY 74 102 102 GLY GLY C . n A 1 75 PHE 75 103 103 PHE PHE C . n A 1 76 LEU 76 104 ? ? ? C . n A 1 77 GLY 77 105 ? ? ? C . n A 1 78 GLY 78 106 ? ? ? C . n A 1 79 ALA 79 107 107 ALA ALA C . n A 1 80 GLN 80 108 108 GLN GLN C . n A 1 81 ALA 81 109 109 ALA ALA C . n A 1 82 GLN 82 110 110 GLN GLN C . n A 1 83 GLU 83 111 111 GLU GLU C . n A 1 84 GLU 84 112 112 GLU GLU C . n A 1 85 ASP 85 113 113 ASP ASP C . n A 1 86 LEU 86 114 114 LEU LEU C . n A 1 87 CYS 87 115 115 CYS CYS C . n A 1 88 ARG 88 116 116 ARG ARG C . n A 1 89 GLY 89 117 117 GLY GLY C . n A 1 90 SER 90 118 118 SER SER C . n A 1 91 GLY 91 119 119 GLY GLY C . n A 1 92 LEU 92 120 120 LEU LEU C . n A 1 93 TYR 93 121 121 TYR TYR C . n A 1 94 PHE 94 122 122 PHE PHE C . n A 1 95 SER 95 123 123 SER SER C . n A 1 96 LEU 96 124 124 LEU LEU C . n A 1 97 THR 97 125 125 THR THR C . n A 1 98 SER 98 126 126 SER SER C . n A 1 99 PRO 99 127 127 PRO PRO C . n A 1 100 GLN 100 128 128 GLN GLN C . n A 1 101 ALA 101 129 129 ALA ALA C . n A 1 102 GLU 102 130 130 GLU GLU C . n A 1 103 PRO 103 131 131 PRO PRO C . n A 1 104 TYR 104 132 132 TYR TYR C . n A 1 105 TYR 105 133 133 TYR TYR C . n A 1 106 ALA 106 134 134 ALA ALA C . n A 1 107 VAL 107 135 135 VAL VAL C . n A 1 108 ASN 108 136 136 ASN ASN C . n A 1 109 ARG 109 137 137 ARG ARG C . n A 1 110 GLN 110 138 138 GLN GLN C . n A 1 111 SER 111 139 139 SER SER C . n A 1 112 HIS 112 140 140 HIS HIS C . n A 1 113 SER 113 141 141 SER SER C . n A 1 114 ALA 114 142 142 ALA ALA C . n A 1 115 LEU 115 143 143 LEU LEU C . n A 1 116 TYR 116 144 144 TYR TYR C . n A 1 117 THR 117 145 145 THR THR C . n A 1 118 ASP 118 146 146 ASP ASP C . n A 1 119 HIS 119 147 147 HIS HIS C . n A 1 120 LEU 120 148 148 LEU LEU C . n A 1 121 ILE 121 149 149 ILE ILE C . n A 1 122 TYR 122 150 150 TYR TYR C . n A 1 123 SER 123 151 151 SER SER C . n A 1 124 PRO 124 152 152 PRO PRO C . n A 1 125 GLN 125 153 153 GLN GLN C . n A 1 126 VAL 126 154 154 VAL VAL C . n A 1 127 PRO 127 155 155 PRO PRO C . n A 1 128 ILE 128 156 156 ILE ILE C . n A 1 129 PHE 129 157 157 PHE PHE C . n A 1 130 ARG 130 158 158 ARG ARG C . n A 1 131 ASP 131 159 159 ASP ASP C . n A 1 132 ASP 132 160 160 ASP ASP C . n A 1 133 ALA 133 161 161 ALA ALA C . n A 1 134 GLY 134 162 162 GLY GLY C . n A 1 135 GLN 135 163 163 GLN GLN C . n A 1 136 LEU 136 164 164 LEU LEU C . n A 1 137 LEU 137 165 165 LEU LEU C . n A 1 138 PRO 138 166 166 PRO PRO C . n A 1 139 ALA 139 167 167 ALA ALA C . n A 1 140 PRO 140 168 168 PRO PRO C . n A 1 141 VAL 141 169 169 VAL VAL C . n A 1 142 PRO 142 170 170 PRO PRO C . n A 1 143 VAL 143 171 171 VAL VAL C . n A 1 144 ASN 144 172 172 ASN ASN C . n A 1 145 ILE 145 173 173 ILE ILE C . n A 1 146 ILE 146 174 174 ILE ILE C . n A 1 147 THR 147 175 175 THR THR C . n A 1 148 ALA 148 176 176 ALA ALA C . n A 1 149 PRO 149 177 177 PRO PRO C . n A 1 150 ALA 150 178 178 ALA ALA C . n A 1 151 PRO 151 179 179 PRO PRO C . n A 1 152 ASN 152 180 180 ASN ASN C . n A 1 153 ALA 153 181 181 ALA ALA C . n A 1 154 GLY 154 182 182 GLY GLY C . n A 1 155 ALA 155 183 183 ALA ALA C . n A 1 156 VAL 156 184 184 VAL VAL C . n A 1 157 ALA 157 185 185 ALA ALA C . n A 1 158 GLN 158 186 186 GLN GLN C . n A 1 159 SER 159 187 187 SER SER C . n A 1 160 ARG 160 188 188 ARG ARG C . n A 1 161 PRO 161 189 189 PRO PRO C . n A 1 162 GLU 162 190 190 GLU GLU C . n A 1 163 GLN 163 191 191 GLN GLN C . n A 1 164 LEU 164 192 192 LEU LEU C . n A 1 165 PRO 165 193 193 PRO PRO C . n A 1 166 GLN 166 194 194 GLN GLN C . n A 1 167 VAL 167 195 195 VAL VAL C . n A 1 168 LEU 168 196 196 LEU LEU C . n A 1 169 PRO 169 197 197 PRO PRO C . n A 1 170 THR 170 198 198 THR THR C . n A 1 171 LEU 171 199 199 LEU LEU C . n A 1 172 ARG 172 200 200 ARG ARG C . n A 1 173 GLU 173 201 201 GLU GLU C . n A 1 174 ARG 174 202 202 ARG ARG C . n A 1 175 ALA 175 203 203 ALA ALA C . n A 1 176 ARG 176 204 204 ARG ARG C . n A 1 177 ARG 177 205 205 ARG ARG C . n A 1 178 VAL 178 206 206 VAL VAL C . n A 1 179 LEU 179 207 207 LEU LEU C . n A 1 180 GLY 180 208 208 GLY GLY C . n A 1 181 VAL 181 209 209 VAL VAL C . n A 1 182 ALA 182 210 210 ALA ALA C . n A 1 183 ALA 183 211 211 ALA ALA C . n A 1 184 TRP 184 212 212 TRP TRP C . n A 1 185 MET 185 213 213 MET MET C . n A 1 186 GLU 186 214 214 GLU GLU C . n A 1 187 GLN 187 215 215 GLN GLN C . n A 1 188 THR 188 216 216 THR THR C . n A 1 189 HIS 189 217 217 HIS HIS C . n A 1 190 LEU 190 218 218 LEU LEU C . n A 1 191 VAL 191 219 219 VAL VAL C . n A 1 192 LEU 192 220 220 LEU LEU C . n A 1 193 GLY 193 221 221 GLY GLY C . n A 1 194 ALA 194 222 222 ALA ALA C . n A 1 195 TRP 195 223 223 TRP TRP C . n A 1 196 GLY 196 224 224 GLY GLY C . n A 1 197 CYS 197 225 225 CYS CYS C . n A 1 198 GLY 198 226 226 GLY GLY C . n A 1 199 VAL 199 227 227 VAL VAL C . n A 1 200 PHE 200 228 228 PHE PHE C . n A 1 201 ARG 201 229 229 ARG ARG C . n A 1 202 ASN 202 230 230 ASN ASN C . n A 1 203 ASP 203 231 231 ASP ASP C . n A 1 204 PRO 204 232 232 PRO PRO C . n A 1 205 ALA 205 233 233 ALA ALA C . n A 1 206 GLY 206 234 234 GLY GLY C . n A 1 207 VAL 207 235 235 VAL VAL C . n A 1 208 ALA 208 236 236 ALA ALA C . n A 1 209 ARG 209 237 237 ARG ARG C . n A 1 210 THR 210 238 238 THR THR C . n A 1 211 PHE 211 239 239 PHE PHE C . n A 1 212 ARG 212 240 240 ARG ARG C . n A 1 213 GLU 213 241 241 GLU GLU C . n A 1 214 LEU 214 242 242 LEU LEU C . n A 1 215 LEU 215 243 243 LEU LEU C . n A 1 216 GLU 216 244 244 GLU GLU C . n A 1 217 GLY 217 245 245 GLY GLY C . n A 1 218 GLU 218 246 246 GLU GLU C . n A 1 219 ALA 219 247 247 ALA ALA C . n A 1 220 GLN 220 248 248 GLN GLN C . n A 1 221 GLY 221 249 249 GLY GLY C . n A 1 222 ALA 222 250 250 ALA ALA C . n A 1 223 PHE 223 251 251 PHE PHE C . n A 1 224 GLU 224 252 252 GLU GLU C . n A 1 225 HIS 225 253 253 HIS HIS C . n A 1 226 VAL 226 254 254 VAL VAL C . n A 1 227 THR 227 255 255 THR THR C . n A 1 228 PHE 228 256 256 PHE PHE C . n A 1 229 ALA 229 257 257 ALA ALA C . n A 1 230 VAL 230 258 258 VAL VAL C . n A 1 231 LEU 231 259 259 LEU LEU C . n A 1 232 ASP 232 260 260 ASP ASP C . n A 1 233 ASN 233 261 261 ASN ASN C . n A 1 234 HIS 234 262 262 HIS HIS C . n A 1 235 PRO 235 263 263 PRO PRO C . n A 1 236 GLN 236 264 264 GLN GLN C . n A 1 237 HIS 237 265 265 HIS HIS C . n A 1 238 PRO 238 266 266 PRO PRO C . n A 1 239 ARG 239 267 267 ARG ARG C . n A 1 240 LEU 240 268 268 LEU LEU C . n A 1 241 GLY 241 269 269 GLY GLY C . n A 1 242 ALA 242 270 270 ALA ALA C . n A 1 243 PHE 243 271 271 PHE PHE C . n A 1 244 ARG 244 272 272 ARG ARG C . n A 1 245 ARG 245 273 273 ARG ARG C . n A 1 246 GLU 246 274 274 GLU GLU C . n A 1 247 LEU 247 275 275 LEU LEU C . n A 1 248 GLU 248 276 276 GLU GLU C . n A 1 249 SER 249 277 277 SER SER C . n A 1 250 LEU 250 278 278 LEU LEU C . n A 1 251 CYS 251 279 279 CYS CYS C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AR6 1 301 2 AR6 AR6 C . C 3 HOH 1 401 6 HOH HOH C . C 3 HOH 2 402 2 HOH HOH C . C 3 HOH 3 403 7 HOH HOH C . C 3 HOH 4 404 8 HOH HOH C . C 3 HOH 5 405 3 HOH HOH C . C 3 HOH 6 406 1 HOH HOH C . C 3 HOH 7 407 4 HOH HOH C . C 3 HOH 8 408 5 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 10950 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id C _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 406 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-02-27 2 'Structure model' 1 1 2020-03-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp 2 2 'Structure model' citation 3 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_chem_comp.pdbx_synonyms' 2 2 'Structure model' '_citation.country' 3 2 'Structure model' '_citation.journal_abbrev' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 17.5991243898 60.7770247116 16.9460165595 0.20771031388 0.508803278341 0.354222920951 -0.0301304240568 0.046745983602 0.0698806948722 2.85051677692 3.1365833044 3.12922442319 0.105267809703 -0.0514809863834 -1.45020977425 0.221399859337 -0.0464148311229 0.219230005022 0.149938109614 -0.31217116109 -0.365342417093 -0.291709150539 0.63230795277 -0.0409062452047 'X-RAY DIFFRACTION' 2 ? refined 11.3298284308 58.2448326929 6.20402012382 0.239205241218 0.517439257683 0.306522404328 0.0531055296578 0.0172635642101 0.0301169635157 1.84299555906 2.75359800869 2.41626876717 0.595829657645 0.630439514879 -0.662665463807 0.273180192467 0.234745895956 0.00586588022156 -0.665115307882 -0.260297318956 0.116195239814 0.0755773152935 0.364020913224 0.0228372436072 'X-RAY DIFFRACTION' 3 ? refined 12.8305769526 65.6735294906 7.97006077542 0.123452322601 0.540512548875 0.323244416035 0.0473018219521 0.0422706943635 0.0673894166581 0.53097342698 2.27495183186 3.13638906338 0.244248586026 0.505500616241 -2.32914061799 0.157607788187 0.296002670967 -0.00505750674003 0.0988572423945 -0.25577903089 -0.0643357605878 -0.242990194775 0.458325854732 0.0353288237945 'X-RAY DIFFRACTION' 4 ? refined 25.0981639449 68.8741875122 5.33921797868 0.242322122461 1.01691839896 0.557743219355 -0.213041067986 0.0542260588443 0.190582732732 2.76330628443 2.78133867613 1.37247682032 -0.500030362301 0.167113925288 0.437267515527 0.030320550945 0.270781258073 0.447838823221 -0.60309411214 -0.224808361065 -0.885444471776 -1.1928414373 1.08840404789 -0.021930474029 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id 1 1 ? ;chain 'C' and (resid 29 through 73 ) ; 'X-RAY DIFFRACTION' ? ? ? ? ? ? ? ? 2 2 ? ;chain 'C' and (resid 74 through 139 ) ; 'X-RAY DIFFRACTION' ? ? ? ? ? ? ? ? 3 3 ? ;chain 'C' and (resid 140 through 212 ) ; 'X-RAY DIFFRACTION' ? ? ? ? ? ? ? ? 4 4 ? ;chain 'C' and (resid 213 through 279 ) ; 'X-RAY DIFFRACTION' ? ? ? ? ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.12_2829 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N C GLY 224 ? ? O2B C AR6 301 ? ? 1.95 2 1 OE1 C GLU 68 ? ? NH2 C ARG 80 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR C 144 ? ? 62.05 176.85 2 1 ASP C 146 ? ? -97.51 37.60 3 1 SER C 187 ? ? -135.47 -41.36 4 1 LEU C 220 ? ? -105.71 -158.86 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C LEU 104 ? A LEU 76 2 1 Y 1 C GLY 105 ? A GLY 77 3 1 Y 1 C GLY 106 ? A GLY 78 # _pdbx_audit_support.funding_organization 'National Science Council (Taiwan)' _pdbx_audit_support.country Taiwan _pdbx_audit_support.grant_number 105-2113-M-002-009 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE ; AR6 3 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 32 2 1' _space_group.name_Hall ;P 32 2" ; _space_group.IT_number 154 _space_group.crystal_system trigonal _space_group.id 1 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x-y,z+2/3 3 -x+y,-x,z+1/3 4 x-y,-y,-z+1/3 5 -x,-x+y,-z+2/3 6 y,x,-z #