data_5ZIM # _entry.id 5ZIM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5ZIM pdb_00005zim 10.2210/pdb5zim/pdb WWPDB D_1300007121 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-10-10 2 'Structure model' 2 0 2021-05-05 3 'Structure model' 2 1 2023-11-22 4 'Structure model' 2 2 2024-11-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Atomic model' 3 2 'Structure model' 'Author supporting evidence' 4 2 'Structure model' 'Data collection' 5 2 'Structure model' 'Derived calculations' 6 2 'Structure model' Other 7 2 'Structure model' 'Structure summary' 8 3 'Structure model' 'Data collection' 9 3 'Structure model' 'Database references' 10 3 'Structure model' 'Refinement description' 11 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' atom_site_anisotrop 3 2 'Structure model' cell 4 2 'Structure model' entity 5 2 'Structure model' pdbx_entity_instance_feature 6 2 'Structure model' pdbx_nonpoly_scheme 7 2 'Structure model' pdbx_unobs_or_zero_occ_atoms 8 2 'Structure model' struct_conn 9 2 'Structure model' struct_site 10 2 'Structure model' struct_site_gen 11 3 'Structure model' chem_comp_atom 12 3 'Structure model' chem_comp_bond 13 3 'Structure model' database_2 14 3 'Structure model' pdbx_initial_refinement_model 15 4 'Structure model' pdbx_entry_details 16 4 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site.auth_seq_id' 6 2 'Structure model' '_atom_site.label_alt_id' 7 2 'Structure model' '_atom_site.occupancy' 8 2 'Structure model' '_atom_site_anisotrop.U[1][1]' 9 2 'Structure model' '_atom_site_anisotrop.U[1][2]' 10 2 'Structure model' '_atom_site_anisotrop.U[1][3]' 11 2 'Structure model' '_atom_site_anisotrop.U[2][2]' 12 2 'Structure model' '_atom_site_anisotrop.U[2][3]' 13 2 'Structure model' '_atom_site_anisotrop.U[3][3]' 14 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 15 2 'Structure model' '_atom_site_anisotrop.pdbx_label_alt_id' 16 2 'Structure model' '_cell.angle_alpha_esd' 17 2 'Structure model' '_cell.angle_beta_esd' 18 2 'Structure model' '_cell.angle_gamma_esd' 19 2 'Structure model' '_cell.length_a_esd' 20 2 'Structure model' '_cell.length_b_esd' 21 2 'Structure model' '_cell.length_c_esd' 22 2 'Structure model' '_entity.formula_weight' 23 2 'Structure model' '_pdbx_nonpoly_scheme.auth_seq_num' 24 2 'Structure model' '_pdbx_nonpoly_scheme.pdb_seq_num' 25 2 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.auth_seq_id' 26 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 3 'Structure model' '_database_2.pdbx_DOI' 28 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5ZIM _pdbx_database_status.recvd_initial_deposition_date 2018-03-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Hasegawa, N.' 1 ? 'Jonotsuka, H.' 2 ? 'Miki, K.' 3 ? 'Takeda, K.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Sci Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2045-2322 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 8 _citation.language ? _citation.page_first 13123 _citation.page_last 13123 _citation.title 'X-ray structure analysis of bacteriorhodopsin at 1.3 angstrom resolution.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41598-018-31370-0 _citation.pdbx_database_id_PubMed 30177765 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hasegawa, N.' 1 ? primary 'Jonotsuka, H.' 2 ? primary 'Miki, K.' 3 ? primary 'Takeda, K.' 4 0000-0002-4094-6816 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Bacteriorhodopsin 24990.535 1 ? ? ? ? 2 non-polymer syn RETINAL 284.436 1 ? ? ? ? 3 non-polymer syn 2,3-DI-PHYTANYL-GLYCEROL 653.157 4 ? ? ? ? 4 water nat water 18.015 29 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name BR,Bacterioopsin,BO # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWARYA DWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMR PEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGE ; _entity_poly.pdbx_seq_one_letter_code_can ;TGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWARYA DWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMR PEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 RETINAL RET 3 2,3-DI-PHYTANYL-GLYCEROL L2P 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 GLY n 1 3 ARG n 1 4 PRO n 1 5 GLU n 1 6 TRP n 1 7 ILE n 1 8 TRP n 1 9 LEU n 1 10 ALA n 1 11 LEU n 1 12 GLY n 1 13 THR n 1 14 ALA n 1 15 LEU n 1 16 MET n 1 17 GLY n 1 18 LEU n 1 19 GLY n 1 20 THR n 1 21 LEU n 1 22 TYR n 1 23 PHE n 1 24 LEU n 1 25 VAL n 1 26 LYS n 1 27 GLY n 1 28 MET n 1 29 GLY n 1 30 VAL n 1 31 SER n 1 32 ASP n 1 33 PRO n 1 34 ASP n 1 35 ALA n 1 36 LYS n 1 37 LYS n 1 38 PHE n 1 39 TYR n 1 40 ALA n 1 41 ILE n 1 42 THR n 1 43 THR n 1 44 LEU n 1 45 VAL n 1 46 PRO n 1 47 ALA n 1 48 ILE n 1 49 ALA n 1 50 PHE n 1 51 THR n 1 52 MET n 1 53 TYR n 1 54 LEU n 1 55 SER n 1 56 MET n 1 57 LEU n 1 58 LEU n 1 59 GLY n 1 60 TYR n 1 61 GLY n 1 62 LEU n 1 63 THR n 1 64 MET n 1 65 VAL n 1 66 PRO n 1 67 PHE n 1 68 GLY n 1 69 GLY n 1 70 GLU n 1 71 GLN n 1 72 ASN n 1 73 PRO n 1 74 ILE n 1 75 TYR n 1 76 TRP n 1 77 ALA n 1 78 ARG n 1 79 TYR n 1 80 ALA n 1 81 ASP n 1 82 TRP n 1 83 LEU n 1 84 PHE n 1 85 THR n 1 86 THR n 1 87 PRO n 1 88 LEU n 1 89 LEU n 1 90 LEU n 1 91 LEU n 1 92 ASP n 1 93 LEU n 1 94 ALA n 1 95 LEU n 1 96 LEU n 1 97 VAL n 1 98 ASP n 1 99 ALA n 1 100 ASP n 1 101 GLN n 1 102 GLY n 1 103 THR n 1 104 ILE n 1 105 LEU n 1 106 ALA n 1 107 LEU n 1 108 VAL n 1 109 GLY n 1 110 ALA n 1 111 ASP n 1 112 GLY n 1 113 ILE n 1 114 MET n 1 115 ILE n 1 116 GLY n 1 117 THR n 1 118 GLY n 1 119 LEU n 1 120 VAL n 1 121 GLY n 1 122 ALA n 1 123 LEU n 1 124 THR n 1 125 LYS n 1 126 VAL n 1 127 TYR n 1 128 SER n 1 129 TYR n 1 130 ARG n 1 131 PHE n 1 132 VAL n 1 133 TRP n 1 134 TRP n 1 135 ALA n 1 136 ILE n 1 137 SER n 1 138 THR n 1 139 ALA n 1 140 ALA n 1 141 MET n 1 142 LEU n 1 143 TYR n 1 144 ILE n 1 145 LEU n 1 146 TYR n 1 147 VAL n 1 148 LEU n 1 149 PHE n 1 150 PHE n 1 151 GLY n 1 152 PHE n 1 153 THR n 1 154 SER n 1 155 LYS n 1 156 ALA n 1 157 GLU n 1 158 SER n 1 159 MET n 1 160 ARG n 1 161 PRO n 1 162 GLU n 1 163 VAL n 1 164 ALA n 1 165 SER n 1 166 THR n 1 167 PHE n 1 168 LYS n 1 169 VAL n 1 170 LEU n 1 171 ARG n 1 172 ASN n 1 173 VAL n 1 174 THR n 1 175 VAL n 1 176 VAL n 1 177 LEU n 1 178 TRP n 1 179 SER n 1 180 ALA n 1 181 TYR n 1 182 PRO n 1 183 VAL n 1 184 VAL n 1 185 TRP n 1 186 LEU n 1 187 ILE n 1 188 GLY n 1 189 SER n 1 190 GLU n 1 191 GLY n 1 192 ALA n 1 193 GLY n 1 194 ILE n 1 195 VAL n 1 196 PRO n 1 197 LEU n 1 198 ASN n 1 199 ILE n 1 200 GLU n 1 201 THR n 1 202 LEU n 1 203 LEU n 1 204 PHE n 1 205 MET n 1 206 VAL n 1 207 LEU n 1 208 ASP n 1 209 VAL n 1 210 SER n 1 211 ALA n 1 212 LYS n 1 213 VAL n 1 214 GLY n 1 215 PHE n 1 216 GLY n 1 217 LEU n 1 218 ILE n 1 219 LEU n 1 220 LEU n 1 221 ARG n 1 222 SER n 1 223 ARG n 1 224 ALA n 1 225 ILE n 1 226 PHE n 1 227 GLY n 1 228 GLU n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 228 _entity_src_nat.common_name 'Halobacterium halobium' _entity_src_nat.pdbx_organism_scientific 'Halobacterium salinarum' _entity_src_nat.pdbx_ncbi_taxonomy_id 64091 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain 'ATCC 700922 / JCM 11081 / NRC-1' _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 L2P non-polymer . 2,3-DI-PHYTANYL-GLYCEROL '1,2-DI-1-(3,7,11,15-TETRAMETHYL-HEXADECANE)-SN-GLYCEROL' 'C43 H88 O3' 653.157 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RET non-polymer . RETINAL ? 'C20 H28 O' 284.436 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 5 5 THR THR A . n A 1 2 GLY 2 6 6 GLY GLY A . n A 1 3 ARG 3 7 7 ARG ARG A . n A 1 4 PRO 4 8 8 PRO PRO A . n A 1 5 GLU 5 9 9 GLU GLU A . n A 1 6 TRP 6 10 10 TRP TRP A . n A 1 7 ILE 7 11 11 ILE ILE A . n A 1 8 TRP 8 12 12 TRP TRP A . n A 1 9 LEU 9 13 13 LEU LEU A . n A 1 10 ALA 10 14 14 ALA ALA A . n A 1 11 LEU 11 15 15 LEU LEU A . n A 1 12 GLY 12 16 16 GLY GLY A . n A 1 13 THR 13 17 17 THR THR A . n A 1 14 ALA 14 18 18 ALA ALA A . n A 1 15 LEU 15 19 19 LEU LEU A . n A 1 16 MET 16 20 20 MET MET A . n A 1 17 GLY 17 21 21 GLY GLY A . n A 1 18 LEU 18 22 22 LEU LEU A . n A 1 19 GLY 19 23 23 GLY GLY A . n A 1 20 THR 20 24 24 THR THR A . n A 1 21 LEU 21 25 25 LEU LEU A . n A 1 22 TYR 22 26 26 TYR TYR A . n A 1 23 PHE 23 27 27 PHE PHE A . n A 1 24 LEU 24 28 28 LEU LEU A . n A 1 25 VAL 25 29 29 VAL VAL A . n A 1 26 LYS 26 30 30 LYS LYS A . n A 1 27 GLY 27 31 31 GLY GLY A . n A 1 28 MET 28 32 32 MET MET A . n A 1 29 GLY 29 33 33 GLY GLY A . n A 1 30 VAL 30 34 34 VAL VAL A . n A 1 31 SER 31 35 35 SER SER A . n A 1 32 ASP 32 36 36 ASP ASP A . n A 1 33 PRO 33 37 37 PRO PRO A . n A 1 34 ASP 34 38 38 ASP ASP A . n A 1 35 ALA 35 39 39 ALA ALA A . n A 1 36 LYS 36 40 40 LYS LYS A . n A 1 37 LYS 37 41 41 LYS LYS A . n A 1 38 PHE 38 42 42 PHE PHE A . n A 1 39 TYR 39 43 43 TYR TYR A . n A 1 40 ALA 40 44 44 ALA ALA A . n A 1 41 ILE 41 45 45 ILE ILE A . n A 1 42 THR 42 46 46 THR THR A . n A 1 43 THR 43 47 47 THR THR A . n A 1 44 LEU 44 48 48 LEU LEU A . n A 1 45 VAL 45 49 49 VAL VAL A . n A 1 46 PRO 46 50 50 PRO PRO A . n A 1 47 ALA 47 51 51 ALA ALA A . n A 1 48 ILE 48 52 52 ILE ILE A . n A 1 49 ALA 49 53 53 ALA ALA A . n A 1 50 PHE 50 54 54 PHE PHE A . n A 1 51 THR 51 55 55 THR THR A . n A 1 52 MET 52 56 56 MET MET A . n A 1 53 TYR 53 57 57 TYR TYR A . n A 1 54 LEU 54 58 58 LEU LEU A . n A 1 55 SER 55 59 59 SER SER A . n A 1 56 MET 56 60 60 MET MET A . n A 1 57 LEU 57 61 61 LEU LEU A . n A 1 58 LEU 58 62 62 LEU LEU A . n A 1 59 GLY 59 63 63 GLY GLY A . n A 1 60 TYR 60 64 64 TYR TYR A . n A 1 61 GLY 61 65 65 GLY GLY A . n A 1 62 LEU 62 66 66 LEU LEU A . n A 1 63 THR 63 67 67 THR THR A . n A 1 64 MET 64 68 68 MET MET A . n A 1 65 VAL 65 69 69 VAL VAL A . n A 1 66 PRO 66 70 70 PRO PRO A . n A 1 67 PHE 67 71 71 PHE PHE A . n A 1 68 GLY 68 72 72 GLY GLY A . n A 1 69 GLY 69 73 73 GLY GLY A . n A 1 70 GLU 70 74 74 GLU GLU A . n A 1 71 GLN 71 75 75 GLN GLN A . n A 1 72 ASN 72 76 76 ASN ASN A . n A 1 73 PRO 73 77 77 PRO PRO A . n A 1 74 ILE 74 78 78 ILE ILE A . n A 1 75 TYR 75 79 79 TYR TYR A . n A 1 76 TRP 76 80 80 TRP TRP A . n A 1 77 ALA 77 81 81 ALA ALA A . n A 1 78 ARG 78 82 82 ARG ARG A . n A 1 79 TYR 79 83 83 TYR TYR A . n A 1 80 ALA 80 84 84 ALA ALA A . n A 1 81 ASP 81 85 85 ASP ASP A . n A 1 82 TRP 82 86 86 TRP TRP A . n A 1 83 LEU 83 87 87 LEU LEU A . n A 1 84 PHE 84 88 88 PHE PHE A . n A 1 85 THR 85 89 89 THR THR A . n A 1 86 THR 86 90 90 THR THR A . n A 1 87 PRO 87 91 91 PRO PRO A . n A 1 88 LEU 88 92 92 LEU LEU A . n A 1 89 LEU 89 93 93 LEU LEU A . n A 1 90 LEU 90 94 94 LEU LEU A . n A 1 91 LEU 91 95 95 LEU LEU A . n A 1 92 ASP 92 96 96 ASP ASP A . n A 1 93 LEU 93 97 97 LEU LEU A . n A 1 94 ALA 94 98 98 ALA ALA A . n A 1 95 LEU 95 99 99 LEU LEU A . n A 1 96 LEU 96 100 100 LEU LEU A . n A 1 97 VAL 97 101 101 VAL VAL A . n A 1 98 ASP 98 102 102 ASP ASP A . n A 1 99 ALA 99 103 103 ALA ALA A . n A 1 100 ASP 100 104 104 ASP ASP A . n A 1 101 GLN 101 105 105 GLN GLN A . n A 1 102 GLY 102 106 106 GLY GLY A . n A 1 103 THR 103 107 107 THR THR A . n A 1 104 ILE 104 108 108 ILE ILE A . n A 1 105 LEU 105 109 109 LEU LEU A . n A 1 106 ALA 106 110 110 ALA ALA A . n A 1 107 LEU 107 111 111 LEU LEU A . n A 1 108 VAL 108 112 112 VAL VAL A . n A 1 109 GLY 109 113 113 GLY GLY A . n A 1 110 ALA 110 114 114 ALA ALA A . n A 1 111 ASP 111 115 115 ASP ASP A . n A 1 112 GLY 112 116 116 GLY GLY A . n A 1 113 ILE 113 117 117 ILE ILE A . n A 1 114 MET 114 118 118 MET MET A . n A 1 115 ILE 115 119 119 ILE ILE A . n A 1 116 GLY 116 120 120 GLY GLY A . n A 1 117 THR 117 121 121 THR THR A . n A 1 118 GLY 118 122 122 GLY GLY A . n A 1 119 LEU 119 123 123 LEU LEU A . n A 1 120 VAL 120 124 124 VAL VAL A . n A 1 121 GLY 121 125 125 GLY GLY A . n A 1 122 ALA 122 126 126 ALA ALA A . n A 1 123 LEU 123 127 127 LEU LEU A . n A 1 124 THR 124 128 128 THR THR A . n A 1 125 LYS 125 129 129 LYS LYS A . n A 1 126 VAL 126 130 130 VAL VAL A . n A 1 127 TYR 127 131 131 TYR TYR A . n A 1 128 SER 128 132 132 SER SER A . n A 1 129 TYR 129 133 133 TYR TYR A . n A 1 130 ARG 130 134 134 ARG ARG A . n A 1 131 PHE 131 135 135 PHE PHE A . n A 1 132 VAL 132 136 136 VAL VAL A . n A 1 133 TRP 133 137 137 TRP TRP A . n A 1 134 TRP 134 138 138 TRP TRP A . n A 1 135 ALA 135 139 139 ALA ALA A . n A 1 136 ILE 136 140 140 ILE ILE A . n A 1 137 SER 137 141 141 SER SER A . n A 1 138 THR 138 142 142 THR THR A . n A 1 139 ALA 139 143 143 ALA ALA A . n A 1 140 ALA 140 144 144 ALA ALA A . n A 1 141 MET 141 145 145 MET MET A . n A 1 142 LEU 142 146 146 LEU LEU A . n A 1 143 TYR 143 147 147 TYR TYR A . n A 1 144 ILE 144 148 148 ILE ILE A . n A 1 145 LEU 145 149 149 LEU LEU A . n A 1 146 TYR 146 150 150 TYR TYR A . n A 1 147 VAL 147 151 151 VAL VAL A . n A 1 148 LEU 148 152 152 LEU LEU A . n A 1 149 PHE 149 153 153 PHE PHE A . n A 1 150 PHE 150 154 154 PHE PHE A . n A 1 151 GLY 151 155 155 GLY GLY A . n A 1 152 PHE 152 156 156 PHE PHE A . n A 1 153 THR 153 157 157 THR THR A . n A 1 154 SER 154 158 158 SER SER A . n A 1 155 LYS 155 159 159 LYS LYS A . n A 1 156 ALA 156 160 160 ALA ALA A . n A 1 157 GLU 157 161 161 GLU GLU A . n A 1 158 SER 158 162 162 SER SER A . n A 1 159 MET 159 163 163 MET MET A . n A 1 160 ARG 160 164 164 ARG ARG A . n A 1 161 PRO 161 165 165 PRO PRO A . n A 1 162 GLU 162 166 166 GLU GLU A . n A 1 163 VAL 163 167 167 VAL VAL A . n A 1 164 ALA 164 168 168 ALA ALA A . n A 1 165 SER 165 169 169 SER SER A . n A 1 166 THR 166 170 170 THR THR A . n A 1 167 PHE 167 171 171 PHE PHE A . n A 1 168 LYS 168 172 172 LYS LYS A . n A 1 169 VAL 169 173 173 VAL VAL A . n A 1 170 LEU 170 174 174 LEU LEU A . n A 1 171 ARG 171 175 175 ARG ARG A . n A 1 172 ASN 172 176 176 ASN ASN A . n A 1 173 VAL 173 177 177 VAL VAL A . n A 1 174 THR 174 178 178 THR THR A . n A 1 175 VAL 175 179 179 VAL VAL A . n A 1 176 VAL 176 180 180 VAL VAL A . n A 1 177 LEU 177 181 181 LEU LEU A . n A 1 178 TRP 178 182 182 TRP TRP A . n A 1 179 SER 179 183 183 SER SER A . n A 1 180 ALA 180 184 184 ALA ALA A . n A 1 181 TYR 181 185 185 TYR TYR A . n A 1 182 PRO 182 186 186 PRO PRO A . n A 1 183 VAL 183 187 187 VAL VAL A . n A 1 184 VAL 184 188 188 VAL VAL A . n A 1 185 TRP 185 189 189 TRP TRP A . n A 1 186 LEU 186 190 190 LEU LEU A . n A 1 187 ILE 187 191 191 ILE ILE A . n A 1 188 GLY 188 192 192 GLY GLY A . n A 1 189 SER 189 193 193 SER SER A . n A 1 190 GLU 190 194 194 GLU GLU A . n A 1 191 GLY 191 195 195 GLY GLY A . n A 1 192 ALA 192 196 196 ALA ALA A . n A 1 193 GLY 193 197 197 GLY GLY A . n A 1 194 ILE 194 198 198 ILE ILE A . n A 1 195 VAL 195 199 199 VAL VAL A . n A 1 196 PRO 196 200 200 PRO PRO A . n A 1 197 LEU 197 201 201 LEU LEU A . n A 1 198 ASN 198 202 202 ASN ASN A . n A 1 199 ILE 199 203 203 ILE ILE A . n A 1 200 GLU 200 204 204 GLU GLU A . n A 1 201 THR 201 205 205 THR THR A . n A 1 202 LEU 202 206 206 LEU LEU A . n A 1 203 LEU 203 207 207 LEU LEU A . n A 1 204 PHE 204 208 208 PHE PHE A . n A 1 205 MET 205 209 209 MET MET A . n A 1 206 VAL 206 210 210 VAL VAL A . n A 1 207 LEU 207 211 211 LEU LEU A . n A 1 208 ASP 208 212 212 ASP ASP A . n A 1 209 VAL 209 213 213 VAL VAL A . n A 1 210 SER 210 214 214 SER SER A . n A 1 211 ALA 211 215 215 ALA ALA A . n A 1 212 LYS 212 216 216 LYS LYS A . n A 1 213 VAL 213 217 217 VAL VAL A . n A 1 214 GLY 214 218 218 GLY GLY A . n A 1 215 PHE 215 219 219 PHE PHE A . n A 1 216 GLY 216 220 220 GLY GLY A . n A 1 217 LEU 217 221 221 LEU LEU A . n A 1 218 ILE 218 222 222 ILE ILE A . n A 1 219 LEU 219 223 223 LEU LEU A . n A 1 220 LEU 220 224 224 LEU LEU A . n A 1 221 ARG 221 225 225 ARG ARG A . n A 1 222 SER 222 226 226 SER SER A . n A 1 223 ARG 223 227 227 ARG ARG A . n A 1 224 ALA 224 228 228 ALA ALA A . n A 1 225 ILE 225 229 229 ILE ILE A . n A 1 226 PHE 226 230 230 PHE PHE A . n A 1 227 GLY 227 231 231 GLY GLY A . n A 1 228 GLU 228 232 232 GLU ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET 1 250 250 RET RET A . C 3 L2P 1 270 270 L2P L2P A . D 3 L2P 1 290 290 L2P L2P A . E 3 L2P 1 300 300 L2P L2P A . F 3 L2P 1 310 310 L2P L2P A . G 4 HOH 1 402 402 HOH HOH A . G 4 HOH 2 401 401 HOH HOH A . G 4 HOH 3 406 406 HOH HOH A . G 4 HOH 4 513 513 HOH HOH A . G 4 HOH 5 512 512 HOH HOH A . G 4 HOH 6 502 502 HOH HOH A . G 4 HOH 7 514 514 HOH HOH A . G 4 HOH 8 403 403 HOH HOH A . G 4 HOH 9 404 404 HOH HOH A . G 4 HOH 10 415 415 HOH HOH A . G 4 HOH 11 420 420 HOH HOH A . G 4 HOH 12 411 411 HOH HOH A . G 4 HOH 13 412 412 HOH HOH A . G 4 HOH 14 501 501 HOH HOH A . G 4 HOH 15 407 407 HOH HOH A . G 4 HOH 16 511 511 HOH HOH A . G 4 HOH 17 405 405 HOH HOH A . G 4 HOH 18 419 419 HOH HOH A . G 4 HOH 19 416 416 HOH HOH A . G 4 HOH 20 450 450 HOH HOH A . G 4 HOH 21 451 451 HOH HOH A . G 4 HOH 22 452 452 HOH HOH A . G 4 HOH 23 453 453 HOH HOH A . G 4 HOH 24 454 454 HOH HOH A . G 4 HOH 25 455 455 HOH HOH A . G 4 HOH 26 456 456 HOH HOH A . G 4 HOH 27 457 457 HOH HOH A . G 4 HOH 28 458 458 HOH HOH A . G 4 HOH 29 459 459 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 232 ? CG ? A GLU 228 CG 2 1 Y 1 A GLU 232 ? CD ? A GLU 228 CD 3 1 Y 1 A GLU 232 ? OE1 ? A GLU 228 OE1 4 1 Y 1 A GLU 232 ? OE2 ? A GLU 228 OE2 5 1 N 1 A L2P 290 ? C13 ? D L2P 1 C13 6 1 N 1 A L2P 290 ? C14 ? D L2P 1 C14 7 1 N 1 A L2P 290 ? C15 ? D L2P 1 C15 8 1 N 1 A L2P 290 ? C16 ? D L2P 1 C16 9 1 N 1 A L2P 290 ? C17 ? D L2P 1 C17 10 1 N 1 A L2P 290 ? C18 ? D L2P 1 C18 11 1 N 1 A L2P 290 ? C19 ? D L2P 1 C19 12 1 N 1 A L2P 290 ? C20 ? D L2P 1 C20 13 1 N 1 A L2P 290 ? C21 ? D L2P 1 C21 14 1 N 1 A L2P 290 ? C22 ? D L2P 1 C22 15 1 N 1 A L2P 290 ? C23 ? D L2P 1 C23 16 1 N 1 A L2P 290 ? C24 ? D L2P 1 C24 17 1 N 1 A L2P 290 ? C25 ? D L2P 1 C25 18 1 N 1 A L2P 290 ? C26 ? D L2P 1 C26 19 1 N 1 A L2P 290 ? C27 ? D L2P 1 C27 20 1 N 1 A L2P 290 ? C28 ? D L2P 1 C28 21 1 N 1 A L2P 290 ? C29 ? D L2P 1 C29 22 1 N 1 A L2P 290 ? C30 ? D L2P 1 C30 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? SHELXL ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 3 # _cell.entry_id 5ZIM _cell.length_a 60.600 _cell.length_b 60.600 _cell.length_c 110.710 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZIM _symmetry.space_group_name_H-M 'P 63' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5ZIM _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 47.74 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'LIPIDIC CUBIC PHASE' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'MO, 2.0-2.5 M phosphate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 15 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-10-22 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.8 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL41XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate 21.706 _reflns.entry_id 5ZIM _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.250 _reflns.d_resolution_low 47 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 63455 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.000 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 33.517 _reflns.pdbx_Rmerge_I_obs 0.103 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 21.630 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.988 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.104 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.000 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.250 1.280 ? 1.660 ? ? ? ? 4679 100.000 ? ? ? ? 3.087 ? ? ? ? ? ? ? ? 33.055 ? ? ? ? 3.135 ? ? 1 1 0.502 ? 1.280 1.320 ? 2.220 ? ? ? ? 4554 100.000 ? ? ? ? 2.276 ? ? ? ? ? ? ? ? 32.123 ? ? ? ? 2.312 ? ? 2 1 0.625 ? 1.320 1.360 ? 2.610 ? ? ? ? 4424 100.000 ? ? ? ? 2.005 ? ? ? ? ? ? ? ? 33.810 ? ? ? ? 2.036 ? ? 3 1 0.669 ? 1.360 1.400 ? 3.390 ? ? ? ? 4304 100.000 ? ? ? ? 1.537 ? ? ? ? ? ? ? ? 32.716 ? ? ? ? 1.561 ? ? 4 1 0.753 ? 1.400 1.440 ? 4.440 ? ? ? ? 4217 100.000 ? ? ? ? 1.216 ? ? ? ? ? ? ? ? 34.661 ? ? ? ? 1.234 ? ? 5 1 0.835 ? 1.440 1.490 ? 6.090 ? ? ? ? 4020 100.000 ? ? ? ? 0.886 ? ? ? ? ? ? ? ? 34.562 ? ? ? ? 0.899 ? ? 6 1 0.913 ? 1.490 1.550 ? 7.980 ? ? ? ? 3921 100.000 ? ? ? ? 0.695 ? ? ? ? ? ? ? ? 34.229 ? ? ? ? 0.705 ? ? 7 1 0.955 ? 1.550 1.610 ? 10.050 ? ? ? ? 3742 100.000 ? ? ? ? 0.540 ? ? ? ? ? ? ? ? 32.471 ? ? ? ? 0.549 ? ? 8 1 0.962 ? 1.610 1.690 ? 13.780 ? ? ? ? 3615 100.000 ? ? ? ? 0.402 ? ? ? ? ? ? ? ? 34.090 ? ? ? ? 0.408 ? ? 9 1 0.976 ? 1.690 1.770 ? 17.200 ? ? ? ? 3445 100.000 ? ? ? ? 0.309 ? ? ? ? ? ? ? ? 32.908 ? ? ? ? 0.314 ? ? 10 1 0.986 ? 1.770 1.860 ? 22.330 ? ? ? ? 3268 100.000 ? ? ? ? 0.236 ? ? ? ? ? ? ? ? 35.258 ? ? ? ? 0.240 ? ? 11 1 0.993 ? 1.860 1.980 ? 29.190 ? ? ? ? 3118 100.000 ? ? ? ? 0.178 ? ? ? ? ? ? ? ? 34.794 ? ? ? ? 0.180 ? ? 12 1 0.995 ? 1.980 2.110 ? 38.870 ? ? ? ? 2905 100.000 ? ? ? ? 0.116 ? ? ? ? ? ? ? ? 34.051 ? ? ? ? 0.117 ? ? 13 1 0.998 ? 2.110 2.280 ? 45.560 ? ? ? ? 2720 100.000 ? ? ? ? 0.098 ? ? ? ? ? ? ? ? 31.385 ? ? ? ? 0.100 ? ? 14 1 0.998 ? 2.280 2.500 ? 53.960 ? ? ? ? 2524 100.000 ? ? ? ? 0.078 ? ? ? ? ? ? ? ? 33.278 ? ? ? ? 0.080 ? ? 15 1 0.999 ? 2.500 2.800 ? 61.650 ? ? ? ? 2245 100.000 ? ? ? ? 0.068 ? ? ? ? ? ? ? ? 32.904 ? ? ? ? 0.069 ? ? 16 1 0.999 ? 2.800 3.230 ? 69.860 ? ? ? ? 2012 100.000 ? ? ? ? 0.059 ? ? ? ? ? ? ? ? 34.433 ? ? ? ? 0.060 ? ? 17 1 0.999 ? 3.230 3.950 ? 74.980 ? ? ? ? 1689 100.000 ? ? ? ? 0.051 ? ? ? ? ? ? ? ? 32.356 ? ? ? ? 0.052 ? ? 18 1 0.999 ? 3.950 5.590 ? 78.770 ? ? ? ? 1319 100.000 ? ? ? ? 0.047 ? ? ? ? ? ? ? ? 32.293 ? ? ? ? 0.048 ? ? 19 1 0.999 ? 5.590 47 ? 82.590 ? ? ? ? 734 99.700 ? ? ? ? 0.043 ? ? ? ? ? ? ? ? 35.005 ? ? ? ? 0.043 ? ? 20 1 0.999 ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 81.980 _refine.B_iso_mean 25.5125 _refine.B_iso_min 12.190 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5ZIM _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.25 _refine.ls_d_res_low 47 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 63455 _refine.ls_number_reflns_R_free 3172 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 100 _refine.ls_percent_reflns_R_free 5 _refine.ls_R_factor_all 0.1253 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.1481 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1253 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1C3W _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1762 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 186 _refine_hist.number_atoms_solvent 29 _refine_hist.number_atoms_total 1977 _refine_hist.d_res_high 1.25 _refine_hist.d_res_low 47 # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 5ZIM _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff 0.1253 _pdbx_refine.free_R_factor_no_cutoff 0.1481 _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5.0 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 3172 _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff ? # _struct.entry_id 5ZIM _struct.title 'Crystal structure of bacteriorhodopsin at 1.25 A resolution' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5ZIM _struct_keywords.text 'proton pump, membrane protein, PROTON TRANSPORT' _struct_keywords.pdbx_keywords 'PROTON TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BACR_HALSA _struct_ref.pdbx_db_accession P02945 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWARYA DWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMR PEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGE ; _struct_ref.pdbx_align_begin 18 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5ZIM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 228 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02945 _struct_ref_seq.db_align_beg 18 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 245 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 5 _struct_ref_seq.pdbx_auth_seq_align_end 232 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 20370 ? 1 MORE -187 ? 1 'SSA (A^2)' 25050 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_635 -y+1,x-y-2,z -0.5000000000 -0.8660254038 0.0000000000 121.2000000000 0.8660254038 -0.5000000000 0.0000000000 -104.9622789387 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_865 -x+y+3,-x+1,z -0.5000000000 0.8660254038 0.0000000000 151.5000000000 -0.8660254038 -0.5000000000 0.0000000000 52.4811394693 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLU A 5 ? MET A 28 ? GLU A 9 MET A 32 1 ? 24 HELX_P HELX_P2 AA2 ASP A 32 ? LEU A 58 ? ASP A 36 LEU A 62 1 ? 27 HELX_P HELX_P3 AA3 TRP A 76 ? VAL A 97 ? TRP A 80 VAL A 101 1 ? 22 HELX_P HELX_P4 AA4 ASP A 100 ? THR A 124 ? ASP A 104 THR A 128 1 ? 25 HELX_P HELX_P5 AA5 VAL A 126 ? GLY A 151 ? VAL A 130 GLY A 155 1 ? 26 HELX_P HELX_P6 AA6 ARG A 160 ? GLY A 188 ? ARG A 164 GLY A 192 1 ? 29 HELX_P HELX_P7 AA7 PRO A 196 ? ARG A 221 ? PRO A 200 ARG A 225 1 ? 26 HELX_P HELX_P8 AA8 SER A 222 ? PHE A 226 ? SER A 226 PHE A 230 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag one _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 212 _struct_conn.ptnr1_label_atom_id NZ _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id RET _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C15 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 216 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id RET _struct_conn.ptnr2_auth_seq_id 250 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.350 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id RET _pdbx_modification_feature.label_asym_id B _pdbx_modification_feature.label_seq_id . _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id LYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 212 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id RET _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 250 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id LYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 216 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom C15 _pdbx_modification_feature.modified_residue_id_linking_atom NZ _pdbx_modification_feature.modified_residue_id LYS _pdbx_modification_feature.ref_pcm_id 1 _pdbx_modification_feature.ref_comp_id RET _pdbx_modification_feature.type Retinoylation _pdbx_modification_feature.category Lipid/lipid-like # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 62 ? PHE A 67 ? LEU A 66 PHE A 71 AA1 2 GLU A 70 ? TYR A 75 ? GLU A 74 TYR A 79 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id THR _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 63 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id THR _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 67 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ILE _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 74 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 78 # _pdbx_entry_details.entry_id 5ZIM _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 232 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OXT _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 232 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.410 _pdbx_validate_rmsd_bond.bond_target_value 1.229 _pdbx_validate_rmsd_bond.bond_deviation 0.181 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.019 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A THR 5 ? ? N A GLY 6 ? ? CA A GLY 6 ? ? 137.67 122.30 15.37 2.10 Y 2 1 NE A ARG 7 ? ? CZ A ARG 7 ? ? NH2 A ARG 7 ? ? 116.92 120.30 -3.38 0.50 N 3 1 CB A ASP 36 ? ? CG A ASP 36 ? ? OD2 A ASP 36 ? ? 124.03 118.30 5.73 0.90 N 4 1 CB A TYR 64 ? ? CG A TYR 64 ? ? CD1 A TYR 64 ? ? 117.00 121.00 -4.00 0.60 N 5 1 CB A PHE 71 ? ? CG A PHE 71 ? ? CD2 A PHE 71 ? ? 115.90 120.80 -4.90 0.70 N 6 1 NE A ARG 82 ? ? CZ A ARG 82 ? ? NH1 A ARG 82 ? ? 115.34 120.30 -4.96 0.50 N 7 1 CB A TYR 133 ? ? CG A TYR 133 ? ? CD2 A TYR 133 ? ? 116.67 121.00 -4.33 0.60 N 8 1 CB A TYR 133 ? ? CG A TYR 133 ? ? CD1 A TYR 133 ? ? 124.96 121.00 3.96 0.60 N 9 1 CA A TRP 189 ? ? CB A TRP 189 ? ? CG A TRP 189 ? ? 126.52 113.70 12.82 1.90 N 10 1 NE A ARG 227 ? ? CZ A ARG 227 ? ? NH1 A ARG 227 ? ? 125.60 120.30 5.30 0.50 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id MET _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 163 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -177.87 _pdbx_validate_torsion.psi 109.07 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HOH O O N N 123 HOH H1 H N N 124 HOH H2 H N N 125 ILE N N N N 126 ILE CA C N S 127 ILE C C N N 128 ILE O O N N 129 ILE CB C N S 130 ILE CG1 C N N 131 ILE CG2 C N N 132 ILE CD1 C N N 133 ILE OXT O N N 134 ILE H H N N 135 ILE H2 H N N 136 ILE HA H N N 137 ILE HB H N N 138 ILE HG12 H N N 139 ILE HG13 H N N 140 ILE HG21 H N N 141 ILE HG22 H N N 142 ILE HG23 H N N 143 ILE HD11 H N N 144 ILE HD12 H N N 145 ILE HD13 H N N 146 ILE HXT H N N 147 L2P C1 C N N 148 L2P O1 O N N 149 L2P C2 C N R 150 L2P O2 O N N 151 L2P C3 C N N 152 L2P O3 O N N 153 L2P C11 C N N 154 L2P C12 C N N 155 L2P C13 C N R 156 L2P C14 C N N 157 L2P C15 C N N 158 L2P C16 C N N 159 L2P C17 C N N 160 L2P C18 C N R 161 L2P C19 C N N 162 L2P C20 C N N 163 L2P C21 C N N 164 L2P C22 C N N 165 L2P C23 C N R 166 L2P C24 C N N 167 L2P C25 C N N 168 L2P C26 C N N 169 L2P C27 C N N 170 L2P C28 C N N 171 L2P C29 C N N 172 L2P C30 C N N 173 L2P C41 C N N 174 L2P C42 C N N 175 L2P C43 C N R 176 L2P C44 C N N 177 L2P C45 C N N 178 L2P C46 C N N 179 L2P C47 C N N 180 L2P C48 C N R 181 L2P C49 C N N 182 L2P C50 C N N 183 L2P C51 C N N 184 L2P C52 C N N 185 L2P C53 C N R 186 L2P C54 C N N 187 L2P C55 C N N 188 L2P C56 C N N 189 L2P C57 C N N 190 L2P C58 C N N 191 L2P C59 C N N 192 L2P C60 C N N 193 L2P H12 H N N 194 L2P H11 H N N 195 L2P H2 H N N 196 L2P H32 H N N 197 L2P H31 H N N 198 L2P H3O H N N 199 L2P H112 H N N 200 L2P H111 H N N 201 L2P H122 H N N 202 L2P H121 H N N 203 L2P H13 H N N 204 L2P H143 H N N 205 L2P H142 H N N 206 L2P H141 H N N 207 L2P H152 H N N 208 L2P H151 H N N 209 L2P H162 H N N 210 L2P H161 H N N 211 L2P H172 H N N 212 L2P H171 H N N 213 L2P H18 H N N 214 L2P H193 H N N 215 L2P H192 H N N 216 L2P H191 H N N 217 L2P H202 H N N 218 L2P H201 H N N 219 L2P H212 H N N 220 L2P H211 H N N 221 L2P H222 H N N 222 L2P H221 H N N 223 L2P H23 H N N 224 L2P H243 H N N 225 L2P H242 H N N 226 L2P H241 H N N 227 L2P H252 H N N 228 L2P H251 H N N 229 L2P H262 H N N 230 L2P H261 H N N 231 L2P H272 H N N 232 L2P H271 H N N 233 L2P H28 H N N 234 L2P H293 H N N 235 L2P H292 H N N 236 L2P H291 H N N 237 L2P H303 H N N 238 L2P H302 H N N 239 L2P H301 H N N 240 L2P H412 H N N 241 L2P H411 H N N 242 L2P H422 H N N 243 L2P H421 H N N 244 L2P H43 H N N 245 L2P H443 H N N 246 L2P H442 H N N 247 L2P H441 H N N 248 L2P H452 H N N 249 L2P H451 H N N 250 L2P H462 H N N 251 L2P H461 H N N 252 L2P H472 H N N 253 L2P H471 H N N 254 L2P H48 H N N 255 L2P H493 H N N 256 L2P H492 H N N 257 L2P H491 H N N 258 L2P H502 H N N 259 L2P H501 H N N 260 L2P H512 H N N 261 L2P H511 H N N 262 L2P H522 H N N 263 L2P H521 H N N 264 L2P H53 H N N 265 L2P H543 H N N 266 L2P H542 H N N 267 L2P H541 H N N 268 L2P H552 H N N 269 L2P H551 H N N 270 L2P H562 H N N 271 L2P H561 H N N 272 L2P H572 H N N 273 L2P H571 H N N 274 L2P H58 H N N 275 L2P H593 H N N 276 L2P H592 H N N 277 L2P H591 H N N 278 L2P H603 H N N 279 L2P H602 H N N 280 L2P H601 H N N 281 LEU N N N N 282 LEU CA C N S 283 LEU C C N N 284 LEU O O N N 285 LEU CB C N N 286 LEU CG C N N 287 LEU CD1 C N N 288 LEU CD2 C N N 289 LEU OXT O N N 290 LEU H H N N 291 LEU H2 H N N 292 LEU HA H N N 293 LEU HB2 H N N 294 LEU HB3 H N N 295 LEU HG H N N 296 LEU HD11 H N N 297 LEU HD12 H N N 298 LEU HD13 H N N 299 LEU HD21 H N N 300 LEU HD22 H N N 301 LEU HD23 H N N 302 LEU HXT H N N 303 LYS N N N N 304 LYS CA C N S 305 LYS C C N N 306 LYS O O N N 307 LYS CB C N N 308 LYS CG C N N 309 LYS CD C N N 310 LYS CE C N N 311 LYS NZ N N N 312 LYS OXT O N N 313 LYS H H N N 314 LYS H2 H N N 315 LYS HA H N N 316 LYS HB2 H N N 317 LYS HB3 H N N 318 LYS HG2 H N N 319 LYS HG3 H N N 320 LYS HD2 H N N 321 LYS HD3 H N N 322 LYS HE2 H N N 323 LYS HE3 H N N 324 LYS HZ1 H N N 325 LYS HZ2 H N N 326 LYS HZ3 H N N 327 LYS HXT H N N 328 MET N N N N 329 MET CA C N S 330 MET C C N N 331 MET O O N N 332 MET CB C N N 333 MET CG C N N 334 MET SD S N N 335 MET CE C N N 336 MET OXT O N N 337 MET H H N N 338 MET H2 H N N 339 MET HA H N N 340 MET HB2 H N N 341 MET HB3 H N N 342 MET HG2 H N N 343 MET HG3 H N N 344 MET HE1 H N N 345 MET HE2 H N N 346 MET HE3 H N N 347 MET HXT H N N 348 PHE N N N N 349 PHE CA C N S 350 PHE C C N N 351 PHE O O N N 352 PHE CB C N N 353 PHE CG C Y N 354 PHE CD1 C Y N 355 PHE CD2 C Y N 356 PHE CE1 C Y N 357 PHE CE2 C Y N 358 PHE CZ C Y N 359 PHE OXT O N N 360 PHE H H N N 361 PHE H2 H N N 362 PHE HA H N N 363 PHE HB2 H N N 364 PHE HB3 H N N 365 PHE HD1 H N N 366 PHE HD2 H N N 367 PHE HE1 H N N 368 PHE HE2 H N N 369 PHE HZ H N N 370 PHE HXT H N N 371 PRO N N N N 372 PRO CA C N S 373 PRO C C N N 374 PRO O O N N 375 PRO CB C N N 376 PRO CG C N N 377 PRO CD C N N 378 PRO OXT O N N 379 PRO H H N N 380 PRO HA H N N 381 PRO HB2 H N N 382 PRO HB3 H N N 383 PRO HG2 H N N 384 PRO HG3 H N N 385 PRO HD2 H N N 386 PRO HD3 H N N 387 PRO HXT H N N 388 RET C1 C N N 389 RET C2 C N N 390 RET C3 C N N 391 RET C4 C N N 392 RET C5 C N N 393 RET C6 C N N 394 RET C7 C N N 395 RET C8 C N N 396 RET C9 C N N 397 RET C10 C N N 398 RET C11 C N N 399 RET C12 C N N 400 RET C13 C N N 401 RET C14 C N N 402 RET C15 C N N 403 RET O1 O N N 404 RET C16 C N N 405 RET C17 C N N 406 RET C18 C N N 407 RET C19 C N N 408 RET C20 C N N 409 RET H21 H N N 410 RET H22 H N N 411 RET H31 H N N 412 RET H32 H N N 413 RET H41 H N N 414 RET H42 H N N 415 RET H7 H N N 416 RET H8 H N N 417 RET H10 H N N 418 RET H11 H N N 419 RET H12 H N N 420 RET H14 H N N 421 RET H15 H N N 422 RET H161 H N N 423 RET H162 H N N 424 RET H163 H N N 425 RET H171 H N N 426 RET H172 H N N 427 RET H173 H N N 428 RET H181 H N N 429 RET H182 H N N 430 RET H183 H N N 431 RET H191 H N N 432 RET H192 H N N 433 RET H193 H N N 434 RET H201 H N N 435 RET H202 H N N 436 RET H203 H N N 437 SER N N N N 438 SER CA C N S 439 SER C C N N 440 SER O O N N 441 SER CB C N N 442 SER OG O N N 443 SER OXT O N N 444 SER H H N N 445 SER H2 H N N 446 SER HA H N N 447 SER HB2 H N N 448 SER HB3 H N N 449 SER HG H N N 450 SER HXT H N N 451 THR N N N N 452 THR CA C N S 453 THR C C N N 454 THR O O N N 455 THR CB C N R 456 THR OG1 O N N 457 THR CG2 C N N 458 THR OXT O N N 459 THR H H N N 460 THR H2 H N N 461 THR HA H N N 462 THR HB H N N 463 THR HG1 H N N 464 THR HG21 H N N 465 THR HG22 H N N 466 THR HG23 H N N 467 THR HXT H N N 468 TRP N N N N 469 TRP CA C N S 470 TRP C C N N 471 TRP O O N N 472 TRP CB C N N 473 TRP CG C Y N 474 TRP CD1 C Y N 475 TRP CD2 C Y N 476 TRP NE1 N Y N 477 TRP CE2 C Y N 478 TRP CE3 C Y N 479 TRP CZ2 C Y N 480 TRP CZ3 C Y N 481 TRP CH2 C Y N 482 TRP OXT O N N 483 TRP H H N N 484 TRP H2 H N N 485 TRP HA H N N 486 TRP HB2 H N N 487 TRP HB3 H N N 488 TRP HD1 H N N 489 TRP HE1 H N N 490 TRP HE3 H N N 491 TRP HZ2 H N N 492 TRP HZ3 H N N 493 TRP HH2 H N N 494 TRP HXT H N N 495 TYR N N N N 496 TYR CA C N S 497 TYR C C N N 498 TYR O O N N 499 TYR CB C N N 500 TYR CG C Y N 501 TYR CD1 C Y N 502 TYR CD2 C Y N 503 TYR CE1 C Y N 504 TYR CE2 C Y N 505 TYR CZ C Y N 506 TYR OH O N N 507 TYR OXT O N N 508 TYR H H N N 509 TYR H2 H N N 510 TYR HA H N N 511 TYR HB2 H N N 512 TYR HB3 H N N 513 TYR HD1 H N N 514 TYR HD2 H N N 515 TYR HE1 H N N 516 TYR HE2 H N N 517 TYR HH H N N 518 TYR HXT H N N 519 VAL N N N N 520 VAL CA C N S 521 VAL C C N N 522 VAL O O N N 523 VAL CB C N N 524 VAL CG1 C N N 525 VAL CG2 C N N 526 VAL OXT O N N 527 VAL H H N N 528 VAL H2 H N N 529 VAL HA H N N 530 VAL HB H N N 531 VAL HG11 H N N 532 VAL HG12 H N N 533 VAL HG13 H N N 534 VAL HG21 H N N 535 VAL HG22 H N N 536 VAL HG23 H N N 537 VAL HXT H N N 538 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 ILE N CA sing N N 118 ILE N H sing N N 119 ILE N H2 sing N N 120 ILE CA C sing N N 121 ILE CA CB sing N N 122 ILE CA HA sing N N 123 ILE C O doub N N 124 ILE C OXT sing N N 125 ILE CB CG1 sing N N 126 ILE CB CG2 sing N N 127 ILE CB HB sing N N 128 ILE CG1 CD1 sing N N 129 ILE CG1 HG12 sing N N 130 ILE CG1 HG13 sing N N 131 ILE CG2 HG21 sing N N 132 ILE CG2 HG22 sing N N 133 ILE CG2 HG23 sing N N 134 ILE CD1 HD11 sing N N 135 ILE CD1 HD12 sing N N 136 ILE CD1 HD13 sing N N 137 ILE OXT HXT sing N N 138 L2P C1 O1 sing N N 139 L2P C1 C2 sing N N 140 L2P C1 H12 sing N N 141 L2P C1 H11 sing N N 142 L2P O1 C11 sing N N 143 L2P C2 O2 sing N N 144 L2P C2 C3 sing N N 145 L2P C2 H2 sing N N 146 L2P O2 C41 sing N N 147 L2P C3 O3 sing N N 148 L2P C3 H32 sing N N 149 L2P C3 H31 sing N N 150 L2P O3 H3O sing N N 151 L2P C11 C12 sing N N 152 L2P C11 H112 sing N N 153 L2P C11 H111 sing N N 154 L2P C12 C13 sing N N 155 L2P C12 H122 sing N N 156 L2P C12 H121 sing N N 157 L2P C13 C14 sing N N 158 L2P C13 C15 sing N N 159 L2P C13 H13 sing N N 160 L2P C14 H143 sing N N 161 L2P C14 H142 sing N N 162 L2P C14 H141 sing N N 163 L2P C15 C16 sing N N 164 L2P C15 H152 sing N N 165 L2P C15 H151 sing N N 166 L2P C16 C17 sing N N 167 L2P C16 H162 sing N N 168 L2P C16 H161 sing N N 169 L2P C17 C18 sing N N 170 L2P C17 H172 sing N N 171 L2P C17 H171 sing N N 172 L2P C18 C19 sing N N 173 L2P C18 C20 sing N N 174 L2P C18 H18 sing N N 175 L2P C19 H193 sing N N 176 L2P C19 H192 sing N N 177 L2P C19 H191 sing N N 178 L2P C20 C21 sing N N 179 L2P C20 H202 sing N N 180 L2P C20 H201 sing N N 181 L2P C21 C22 sing N N 182 L2P C21 H212 sing N N 183 L2P C21 H211 sing N N 184 L2P C22 C23 sing N N 185 L2P C22 H222 sing N N 186 L2P C22 H221 sing N N 187 L2P C23 C24 sing N N 188 L2P C23 C25 sing N N 189 L2P C23 H23 sing N N 190 L2P C24 H243 sing N N 191 L2P C24 H242 sing N N 192 L2P C24 H241 sing N N 193 L2P C25 C26 sing N N 194 L2P C25 H252 sing N N 195 L2P C25 H251 sing N N 196 L2P C26 C27 sing N N 197 L2P C26 H262 sing N N 198 L2P C26 H261 sing N N 199 L2P C27 C28 sing N N 200 L2P C27 H272 sing N N 201 L2P C27 H271 sing N N 202 L2P C28 C29 sing N N 203 L2P C28 C30 sing N N 204 L2P C28 H28 sing N N 205 L2P C29 H293 sing N N 206 L2P C29 H292 sing N N 207 L2P C29 H291 sing N N 208 L2P C30 H303 sing N N 209 L2P C30 H302 sing N N 210 L2P C30 H301 sing N N 211 L2P C41 C42 sing N N 212 L2P C41 H412 sing N N 213 L2P C41 H411 sing N N 214 L2P C42 C43 sing N N 215 L2P C42 H422 sing N N 216 L2P C42 H421 sing N N 217 L2P C43 C44 sing N N 218 L2P C43 C45 sing N N 219 L2P C43 H43 sing N N 220 L2P C44 H443 sing N N 221 L2P C44 H442 sing N N 222 L2P C44 H441 sing N N 223 L2P C45 C46 sing N N 224 L2P C45 H452 sing N N 225 L2P C45 H451 sing N N 226 L2P C46 C47 sing N N 227 L2P C46 H462 sing N N 228 L2P C46 H461 sing N N 229 L2P C47 C48 sing N N 230 L2P C47 H472 sing N N 231 L2P C47 H471 sing N N 232 L2P C48 C49 sing N N 233 L2P C48 C50 sing N N 234 L2P C48 H48 sing N N 235 L2P C49 H493 sing N N 236 L2P C49 H492 sing N N 237 L2P C49 H491 sing N N 238 L2P C50 C51 sing N N 239 L2P C50 H502 sing N N 240 L2P C50 H501 sing N N 241 L2P C51 C52 sing N N 242 L2P C51 H512 sing N N 243 L2P C51 H511 sing N N 244 L2P C52 C53 sing N N 245 L2P C52 H522 sing N N 246 L2P C52 H521 sing N N 247 L2P C53 C54 sing N N 248 L2P C53 C55 sing N N 249 L2P C53 H53 sing N N 250 L2P C54 H543 sing N N 251 L2P C54 H542 sing N N 252 L2P C54 H541 sing N N 253 L2P C55 C56 sing N N 254 L2P C55 H552 sing N N 255 L2P C55 H551 sing N N 256 L2P C56 C57 sing N N 257 L2P C56 H562 sing N N 258 L2P C56 H561 sing N N 259 L2P C57 C58 sing N N 260 L2P C57 H572 sing N N 261 L2P C57 H571 sing N N 262 L2P C58 C59 sing N N 263 L2P C58 C60 sing N N 264 L2P C58 H58 sing N N 265 L2P C59 H593 sing N N 266 L2P C59 H592 sing N N 267 L2P C59 H591 sing N N 268 L2P C60 H603 sing N N 269 L2P C60 H602 sing N N 270 L2P C60 H601 sing N N 271 LEU N CA sing N N 272 LEU N H sing N N 273 LEU N H2 sing N N 274 LEU CA C sing N N 275 LEU CA CB sing N N 276 LEU CA HA sing N N 277 LEU C O doub N N 278 LEU C OXT sing N N 279 LEU CB CG sing N N 280 LEU CB HB2 sing N N 281 LEU CB HB3 sing N N 282 LEU CG CD1 sing N N 283 LEU CG CD2 sing N N 284 LEU CG HG sing N N 285 LEU CD1 HD11 sing N N 286 LEU CD1 HD12 sing N N 287 LEU CD1 HD13 sing N N 288 LEU CD2 HD21 sing N N 289 LEU CD2 HD22 sing N N 290 LEU CD2 HD23 sing N N 291 LEU OXT HXT sing N N 292 LYS N CA sing N N 293 LYS N H sing N N 294 LYS N H2 sing N N 295 LYS CA C sing N N 296 LYS CA CB sing N N 297 LYS CA HA sing N N 298 LYS C O doub N N 299 LYS C OXT sing N N 300 LYS CB CG sing N N 301 LYS CB HB2 sing N N 302 LYS CB HB3 sing N N 303 LYS CG CD sing N N 304 LYS CG HG2 sing N N 305 LYS CG HG3 sing N N 306 LYS CD CE sing N N 307 LYS CD HD2 sing N N 308 LYS CD HD3 sing N N 309 LYS CE NZ sing N N 310 LYS CE HE2 sing N N 311 LYS CE HE3 sing N N 312 LYS NZ HZ1 sing N N 313 LYS NZ HZ2 sing N N 314 LYS NZ HZ3 sing N N 315 LYS OXT HXT sing N N 316 MET N CA sing N N 317 MET N H sing N N 318 MET N H2 sing N N 319 MET CA C sing N N 320 MET CA CB sing N N 321 MET CA HA sing N N 322 MET C O doub N N 323 MET C OXT sing N N 324 MET CB CG sing N N 325 MET CB HB2 sing N N 326 MET CB HB3 sing N N 327 MET CG SD sing N N 328 MET CG HG2 sing N N 329 MET CG HG3 sing N N 330 MET SD CE sing N N 331 MET CE HE1 sing N N 332 MET CE HE2 sing N N 333 MET CE HE3 sing N N 334 MET OXT HXT sing N N 335 PHE N CA sing N N 336 PHE N H sing N N 337 PHE N H2 sing N N 338 PHE CA C sing N N 339 PHE CA CB sing N N 340 PHE CA HA sing N N 341 PHE C O doub N N 342 PHE C OXT sing N N 343 PHE CB CG sing N N 344 PHE CB HB2 sing N N 345 PHE CB HB3 sing N N 346 PHE CG CD1 doub Y N 347 PHE CG CD2 sing Y N 348 PHE CD1 CE1 sing Y N 349 PHE CD1 HD1 sing N N 350 PHE CD2 CE2 doub Y N 351 PHE CD2 HD2 sing N N 352 PHE CE1 CZ doub Y N 353 PHE CE1 HE1 sing N N 354 PHE CE2 CZ sing Y N 355 PHE CE2 HE2 sing N N 356 PHE CZ HZ sing N N 357 PHE OXT HXT sing N N 358 PRO N CA sing N N 359 PRO N CD sing N N 360 PRO N H sing N N 361 PRO CA C sing N N 362 PRO CA CB sing N N 363 PRO CA HA sing N N 364 PRO C O doub N N 365 PRO C OXT sing N N 366 PRO CB CG sing N N 367 PRO CB HB2 sing N N 368 PRO CB HB3 sing N N 369 PRO CG CD sing N N 370 PRO CG HG2 sing N N 371 PRO CG HG3 sing N N 372 PRO CD HD2 sing N N 373 PRO CD HD3 sing N N 374 PRO OXT HXT sing N N 375 RET C1 C2 sing N N 376 RET C1 C6 sing N N 377 RET C1 C16 sing N N 378 RET C1 C17 sing N N 379 RET C2 C3 sing N N 380 RET C2 H21 sing N N 381 RET C2 H22 sing N N 382 RET C3 C4 sing N N 383 RET C3 H31 sing N N 384 RET C3 H32 sing N N 385 RET C4 C5 sing N N 386 RET C4 H41 sing N N 387 RET C4 H42 sing N N 388 RET C5 C6 doub N N 389 RET C5 C18 sing N N 390 RET C6 C7 sing N N 391 RET C7 C8 doub N E 392 RET C7 H7 sing N N 393 RET C8 C9 sing N N 394 RET C8 H8 sing N N 395 RET C9 C10 doub N E 396 RET C9 C19 sing N N 397 RET C10 C11 sing N N 398 RET C10 H10 sing N N 399 RET C11 C12 doub N E 400 RET C11 H11 sing N N 401 RET C12 C13 sing N N 402 RET C12 H12 sing N N 403 RET C13 C14 doub N E 404 RET C13 C20 sing N N 405 RET C14 C15 sing N N 406 RET C14 H14 sing N N 407 RET C15 O1 doub N N 408 RET C15 H15 sing N N 409 RET C16 H161 sing N N 410 RET C16 H162 sing N N 411 RET C16 H163 sing N N 412 RET C17 H171 sing N N 413 RET C17 H172 sing N N 414 RET C17 H173 sing N N 415 RET C18 H181 sing N N 416 RET C18 H182 sing N N 417 RET C18 H183 sing N N 418 RET C19 H191 sing N N 419 RET C19 H192 sing N N 420 RET C19 H193 sing N N 421 RET C20 H201 sing N N 422 RET C20 H202 sing N N 423 RET C20 H203 sing N N 424 SER N CA sing N N 425 SER N H sing N N 426 SER N H2 sing N N 427 SER CA C sing N N 428 SER CA CB sing N N 429 SER CA HA sing N N 430 SER C O doub N N 431 SER C OXT sing N N 432 SER CB OG sing N N 433 SER CB HB2 sing N N 434 SER CB HB3 sing N N 435 SER OG HG sing N N 436 SER OXT HXT sing N N 437 THR N CA sing N N 438 THR N H sing N N 439 THR N H2 sing N N 440 THR CA C sing N N 441 THR CA CB sing N N 442 THR CA HA sing N N 443 THR C O doub N N 444 THR C OXT sing N N 445 THR CB OG1 sing N N 446 THR CB CG2 sing N N 447 THR CB HB sing N N 448 THR OG1 HG1 sing N N 449 THR CG2 HG21 sing N N 450 THR CG2 HG22 sing N N 451 THR CG2 HG23 sing N N 452 THR OXT HXT sing N N 453 TRP N CA sing N N 454 TRP N H sing N N 455 TRP N H2 sing N N 456 TRP CA C sing N N 457 TRP CA CB sing N N 458 TRP CA HA sing N N 459 TRP C O doub N N 460 TRP C OXT sing N N 461 TRP CB CG sing N N 462 TRP CB HB2 sing N N 463 TRP CB HB3 sing N N 464 TRP CG CD1 doub Y N 465 TRP CG CD2 sing Y N 466 TRP CD1 NE1 sing Y N 467 TRP CD1 HD1 sing N N 468 TRP CD2 CE2 doub Y N 469 TRP CD2 CE3 sing Y N 470 TRP NE1 CE2 sing Y N 471 TRP NE1 HE1 sing N N 472 TRP CE2 CZ2 sing Y N 473 TRP CE3 CZ3 doub Y N 474 TRP CE3 HE3 sing N N 475 TRP CZ2 CH2 doub Y N 476 TRP CZ2 HZ2 sing N N 477 TRP CZ3 CH2 sing Y N 478 TRP CZ3 HZ3 sing N N 479 TRP CH2 HH2 sing N N 480 TRP OXT HXT sing N N 481 TYR N CA sing N N 482 TYR N H sing N N 483 TYR N H2 sing N N 484 TYR CA C sing N N 485 TYR CA CB sing N N 486 TYR CA HA sing N N 487 TYR C O doub N N 488 TYR C OXT sing N N 489 TYR CB CG sing N N 490 TYR CB HB2 sing N N 491 TYR CB HB3 sing N N 492 TYR CG CD1 doub Y N 493 TYR CG CD2 sing Y N 494 TYR CD1 CE1 sing Y N 495 TYR CD1 HD1 sing N N 496 TYR CD2 CE2 doub Y N 497 TYR CD2 HD2 sing N N 498 TYR CE1 CZ doub Y N 499 TYR CE1 HE1 sing N N 500 TYR CE2 CZ sing Y N 501 TYR CE2 HE2 sing N N 502 TYR CZ OH sing N N 503 TYR OH HH sing N N 504 TYR OXT HXT sing N N 505 VAL N CA sing N N 506 VAL N H sing N N 507 VAL N H2 sing N N 508 VAL CA C sing N N 509 VAL CA CB sing N N 510 VAL CA HA sing N N 511 VAL C O doub N N 512 VAL C OXT sing N N 513 VAL CB CG1 sing N N 514 VAL CB CG2 sing N N 515 VAL CB HB sing N N 516 VAL CG1 HG11 sing N N 517 VAL CG1 HG12 sing N N 518 VAL CG1 HG13 sing N N 519 VAL CG2 HG21 sing N N 520 VAL CG2 HG22 sing N N 521 VAL CG2 HG23 sing N N 522 VAL OXT HXT sing N N 523 # _pdbx_audit_support.funding_organization JSPS _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number '25440020, 17H03643' _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1C3W _pdbx_initial_refinement_model.details ? # _pdbx_reflns_twin.domain_id 1 _pdbx_reflns_twin.crystal_id 1 _pdbx_reflns_twin.diffrn_id 1 _pdbx_reflns_twin.type ? _pdbx_reflns_twin.operator h,-h-k,-l _pdbx_reflns_twin.fraction 0.436 # _atom_sites.entry_id 5ZIM _atom_sites.fract_transf_matrix[1][1] 0.016502 _atom_sites.fract_transf_matrix[1][2] 0.009527 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019054 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009033 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_