data_5BIR # _entry.id 5BIR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.375 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5BIR pdb_00005bir 10.2210/pdb5bir/pdb WWPDB D_1000179674 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 5BIR _pdbx_database_status.recvd_initial_deposition_date 1997-06-30 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Doumen, J.' 1 'Steyaert, J.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Dissecting histidine interactions of ribonuclease T1 with asparagine and glutamine replacements: analysis of double mutant cycles at one position. ; J.Mol.Biol. 275 651 661 1998 JMOBAK UK 0022-2836 0070 ? 9466938 10.1006/jmbi.1997.1480 1 'His92Ala Mutation in Ribonuclease T1 Induces Segmental Flexibility. An X-Ray Study' J.Mol.Biol. 224 701 ? 1992 JMOBAK UK 0022-2836 0070 ? ? ? 2 ;Three-Dimensional Structure of the Ribonuclease T1 2'-Gmp Complex at 1.9-A Resolution ; J.Biol.Chem. 263 15358 ? 1988 JBCHA3 US 0021-9258 0071 ? ? ? 3 ;Specific Protein-Nucleic Acid Recognition in Ribonuclease T1-2'-Guanylic Acid Complex. An X-Ray Study ; Nature 299 27 ? 1982 NATUAS UK 0028-0836 0006 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'De Vos, S.' 1 ? primary 'Doumen, J.' 2 ? primary 'Langhorst, U.' 3 ? primary 'Steyaert, J.' 4 ? 1 'Koellner, G.' 5 ? 1 'Choe, H.W.' 6 ? 1 'Heinemann, U.' 7 ? 1 'Grunert, H.P.' 8 ? 1 'Zouni, A.' 9 ? 1 'Hahn, U.' 10 ? 1 'Saenger, W.' 11 ? 2 'Arni, R.' 12 ? 2 'Heinemann, U.' 13 ? 2 'Tokuoka, R.' 14 ? 2 'Saenger, W.' 15 ? 3 'Heinemann, U.' 16 ? 3 'Saenger, W.' 17 ? # _cell.entry_id 5BIR _cell.length_a 58.390 _cell.length_b 58.390 _cell.length_c 133.390 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5BIR _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RIBONUCLEASE T1' 11084.676 2 3.1.27.3 H92Q ? ? 2 non-polymer syn "GUANOSINE-2'-MONOPHOSPHATE" 363.221 2 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 4 water nat water 18.015 138 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RNASE T1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ACDYTCGSNCYSSSDVSTAQAAGYKLHEDGETVGSNSYPHKYNNYEGFDFSVSSPYYEWPILSSGDVYSGGSPGADRVVF NENNQLAGVITQTGASGNNFVECT ; _entity_poly.pdbx_seq_one_letter_code_can ;ACDYTCGSNCYSSSDVSTAQAAGYKLHEDGETVGSNSYPHKYNNYEGFDFSVSSPYYEWPILSSGDVYSGGSPGADRVVF NENNQLAGVITQTGASGNNFVECT ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 CYS n 1 3 ASP n 1 4 TYR n 1 5 THR n 1 6 CYS n 1 7 GLY n 1 8 SER n 1 9 ASN n 1 10 CYS n 1 11 TYR n 1 12 SER n 1 13 SER n 1 14 SER n 1 15 ASP n 1 16 VAL n 1 17 SER n 1 18 THR n 1 19 ALA n 1 20 GLN n 1 21 ALA n 1 22 ALA n 1 23 GLY n 1 24 TYR n 1 25 LYS n 1 26 LEU n 1 27 HIS n 1 28 GLU n 1 29 ASP n 1 30 GLY n 1 31 GLU n 1 32 THR n 1 33 VAL n 1 34 GLY n 1 35 SER n 1 36 ASN n 1 37 SER n 1 38 TYR n 1 39 PRO n 1 40 HIS n 1 41 LYS n 1 42 TYR n 1 43 ASN n 1 44 ASN n 1 45 TYR n 1 46 GLU n 1 47 GLY n 1 48 PHE n 1 49 ASP n 1 50 PHE n 1 51 SER n 1 52 VAL n 1 53 SER n 1 54 SER n 1 55 PRO n 1 56 TYR n 1 57 TYR n 1 58 GLU n 1 59 TRP n 1 60 PRO n 1 61 ILE n 1 62 LEU n 1 63 SER n 1 64 SER n 1 65 GLY n 1 66 ASP n 1 67 VAL n 1 68 TYR n 1 69 SER n 1 70 GLY n 1 71 GLY n 1 72 SER n 1 73 PRO n 1 74 GLY n 1 75 ALA n 1 76 ASP n 1 77 ARG n 1 78 VAL n 1 79 VAL n 1 80 PHE n 1 81 ASN n 1 82 GLU n 1 83 ASN n 1 84 ASN n 1 85 GLN n 1 86 LEU n 1 87 ALA n 1 88 GLY n 1 89 VAL n 1 90 ILE n 1 91 THR n 1 92 GLN n 1 93 THR n 1 94 GLY n 1 95 ALA n 1 96 SER n 1 97 GLY n 1 98 ASN n 1 99 ASN n 1 100 PHE n 1 101 VAL n 1 102 GLU n 1 103 CYS n 1 104 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Aspergillus _entity_src_gen.pdbx_gene_src_gene 'SYNTHETIC GENE' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Aspergillus oryzae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5062 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene 'SYNTHETIC GENE' _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PMC5-RT1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RNT1_ASPOR _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P00651 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MMYSKLLTLTTLLLPTALALPSLVERACDYTCGSNCYSSSDVSTAQAAGYQLHEDGETVGSNSYPHKYNNYEGFDFSVSS PYYEWPILSSGDVYSGGSPGADRVVFNENNQLAGVITHTGASGNNFVECT ; _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5BIR A 1 ? 104 ? P00651 27 ? 130 ? 1 104 2 1 5BIR B 1 ? 104 ? P00651 27 ? 130 ? 1 104 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5BIR LYS A 25 ? UNP P00651 GLN 51 conflict 25 1 1 5BIR GLN A 92 ? UNP P00651 HIS 118 'engineered mutation' 92 2 2 5BIR LYS B 25 ? UNP P00651 GLN 51 conflict 25 3 2 5BIR GLN B 92 ? UNP P00651 HIS 118 'engineered mutation' 92 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2GP non-polymer . "GUANOSINE-2'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 5BIR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.56 _exptl_crystal.density_percent_sol 52.01 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.2 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;VAPOR DIFFUSION, HANGING DROP, 20 MG/ML PROTEIN NAOAC BUF. PH 4.2, 0.125 % 2'GMP, 1.25 % CACL2, 47.5 % MPD, vapor diffusion - hanging drop ; # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector DIFFRACTOMETER _diffrn_detector.type 'ENRAF-NONIUS FAST' _diffrn_detector.pdbx_collection_date 1996-02-20 _diffrn_detector.details COLLIMATOR # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'GRAPHITE(002)' _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source ? _diffrn_source.type ENRAF-NONIUS _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 5BIR _reflns.observed_criterion_sigma_I 3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 10.0 _reflns.d_resolution_high 2.0 _reflns.number_obs 15698 _reflns.number_all ? _reflns.percent_possible_obs 96. _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.05 _reflns.pdbx_netI_over_sigmaI 10.1 _reflns.B_iso_Wilson_estimate 11.8 _reflns.pdbx_redundancy 1.3 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.85 _reflns_shell.d_res_low 1.95 _reflns_shell.percent_possible_all 90.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.038 _reflns_shell.meanI_over_sigI_obs 7.2 _reflns_shell.pdbx_redundancy 1.0 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 5BIR _refine.ls_number_reflns_obs 15698 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 10000000. _refine.pdbx_data_cutoff_low_absF 0.00100 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 97.1 _refine.ls_R_factor_obs 0.193 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.193 _refine.ls_R_factor_R_free 0.255 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.9 _refine.ls_number_reflns_R_free 1554 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 19.7 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 2AAD' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 5BIR _refine_analyze.Luzzati_coordinate_error_obs 0.21 _refine_analyze.Luzzati_sigma_a_obs 0.21 _refine_analyze.Luzzati_d_res_low_obs 8.00 _refine_analyze.Luzzati_coordinate_error_free 0.26 _refine_analyze.Luzzati_sigma_a_free 0.22 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1669 _refine_hist.pdbx_number_atoms_nucleic_acid 32 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 29 _refine_hist.number_atoms_total 1730 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.031 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 2.9 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 26.8 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 3.09 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 2.04 1.70 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 3.14 2.30 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 3.38 2.30 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 4.60 2.80 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.00 _refine_ls_shell.d_res_low 2.12 _refine_ls_shell.number_reflns_R_work 2174 _refine_ls_shell.R_factor_R_work 0.269 _refine_ls_shell.percent_reflns_obs 91.7 _refine_ls_shell.R_factor_R_free 0.326 _refine_ls_shell.R_factor_R_free_error 0.021 _refine_ls_shell.percent_reflns_R_free 9.9 _refine_ls_shell.number_reflns_R_free 239 _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARHCSDX.PRO TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 PARAM19.SOL TOPH19.SOL 'X-RAY DIFFRACTION' 3 NUCL.PARAM NUCL.TOPOL 'X-RAY DIFFRACTION' # _struct.entry_id 5BIR _struct.title 'DISECTING HISTIDINE INTERACTIONS IN RIBONUCLEASE T1 USING ASN AND GLN MUTATIONS' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5BIR _struct_keywords.pdbx_keywords ENDONUCLEASE _struct_keywords.text 'ENDONUCLEASE, RIBONUCLEASE T1, MUTATION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 2 ? G N N 4 ? H N N 4 ? # loop_ _struct_biol.id 1 2 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 13 ? GLU A 28 ? SER A 13 GLU A 28 1 ? 16 HELX_P HELX_P2 2 SER B 13 ? ASP B 29 ? SER B 13 ASP B 29 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 2 SG A ? ? 1_555 A CYS 10 SG ? ? A CYS 2 A CYS 10 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf2 disulf ? ? A CYS 2 SG B ? ? 1_555 A CYS 10 SG ? ? A CYS 2 A CYS 10 1_555 ? ? ? ? ? ? ? 2.020 ? ? disulf3 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 103 SG ? ? A CYS 6 A CYS 103 1_555 ? ? ? ? ? ? ? 2.044 ? ? disulf4 disulf ? ? B CYS 2 SG ? ? ? 1_555 B CYS 10 SG ? ? B CYS 2 B CYS 10 1_555 ? ? ? ? ? ? ? 2.374 ? ? disulf5 disulf ? ? B CYS 6 SG ? ? ? 1_555 B CYS 103 SG ? ? B CYS 6 B CYS 103 1_555 ? ? ? ? ? ? ? 2.191 ? ? metalc1 metalc ? ? A GLN 92 O ? ? ? 5_646 D CA . CA ? ? A GLN 92 B CA 501 1_555 ? ? ? ? ? ? ? 2.269 ? ? metalc2 metalc ? ? A ALA 95 O ? ? ? 5_646 D CA . CA ? ? A ALA 95 B CA 501 1_555 ? ? ? ? ? ? ? 2.272 ? ? metalc3 metalc ? ? G HOH . O ? ? ? 5_646 D CA . CA ? ? A HOH 108 B CA 501 1_555 ? ? ? ? ? ? ? 2.309 ? ? metalc4 metalc ? ? G HOH . O ? ? ? 5_646 D CA . CA ? ? A HOH 119 B CA 501 1_555 ? ? ? ? ? ? ? 2.581 ? ? metalc5 metalc ? ? B TYR 45 O ? ? ? 8_666 E CA . CA ? ? B TYR 45 B CA 601 1_555 ? ? ? ? ? ? ? 2.254 ? ? metalc6 metalc ? ? B GLY 47 O ? ? ? 1_555 E CA . CA ? ? B GLY 47 B CA 601 1_555 ? ? ? ? ? ? ? 2.286 ? ? metalc7 metalc ? ? B ASP 49 OD1 ? ? ? 1_555 E CA . CA ? ? B ASP 49 B CA 601 1_555 ? ? ? ? ? ? ? 2.178 ? ? metalc8 metalc ? ? B GLN 85 OE1 ? ? ? 1_555 D CA . CA ? ? B GLN 85 B CA 501 1_555 ? ? ? ? ? ? ? 2.439 ? ? metalc9 metalc ? ? D CA . CA ? ? ? 1_555 H HOH . O ? ? B CA 501 B HOH 626 1_555 ? ? ? ? ? ? ? 2.613 ? ? metalc10 metalc ? ? E CA . CA ? ? ? 1_555 H HOH . O ? ? B CA 601 B HOH 644 8_666 ? ? ? ? ? ? ? 2.185 ? ? metalc11 metalc ? ? E CA . CA ? ? ? 1_555 H HOH . O ? ? B CA 601 B HOH 671 8_666 ? ? ? ? ? ? ? 2.586 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 38 A . ? TYR 38 A PRO 39 A ? PRO 39 A 1 -0.22 2 SER 54 A . ? SER 54 A PRO 55 A ? PRO 55 A 1 -1.23 3 TYR 38 B . ? TYR 38 B PRO 39 B ? PRO 39 B 1 -0.46 4 SER 54 B . ? SER 54 B PRO 55 B ? PRO 55 B 1 -0.63 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 4 ? C ? 2 ? D ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 4 ? CYS A 6 ? TYR A 4 CYS A 6 A 2 ASN A 9 ? TYR A 11 ? ASN A 9 TYR A 11 B 1 HIS A 40 ? TYR A 42 ? HIS A 40 TYR A 42 B 2 TYR A 56 ? PRO A 60 ? TYR A 56 PRO A 60 B 3 ASP A 76 ? ASN A 81 ? ASP A 76 ASN A 81 B 4 LEU A 86 ? THR A 91 ? LEU A 86 THR A 91 C 1 TYR B 4 ? CYS B 6 ? TYR B 4 CYS B 6 C 2 ASN B 9 ? TYR B 11 ? ASN B 9 TYR B 11 D 1 HIS B 40 ? TYR B 42 ? HIS B 40 TYR B 42 D 2 TYR B 56 ? PRO B 60 ? TYR B 56 PRO B 60 D 3 ASP B 76 ? ASN B 81 ? ASP B 76 ASN B 81 D 4 LEU B 86 ? THR B 91 ? LEU B 86 THR B 91 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 4 ? O TYR A 4 N TYR A 11 ? N TYR A 11 B 1 2 O HIS A 40 ? O HIS A 40 N GLU A 58 ? N GLU A 58 B 2 3 O TYR A 57 ? O TYR A 57 N PHE A 80 ? N PHE A 80 B 3 4 O ARG A 77 ? O ARG A 77 N ILE A 90 ? N ILE A 90 C 1 2 O TYR B 4 ? O TYR B 4 N TYR B 11 ? N TYR B 11 D 1 2 O HIS B 40 ? O HIS B 40 N GLU B 58 ? N GLU B 58 D 2 3 O TYR B 57 ? O TYR B 57 N PHE B 80 ? N PHE B 80 D 3 4 O ARG B 77 ? O ARG B 77 N ILE B 90 ? N ILE B 90 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details CAT Unknown ? ? ? ? 5 'CATALYTIC SITE.' AC1 Software B CA 501 ? 6 'BINDING SITE FOR RESIDUE CA B 501' AC2 Software B CA 601 ? 5 'BINDING SITE FOR RESIDUE CA B 601' AC3 Software A 2GP 105 ? 15 'BINDING SITE FOR RESIDUE 2GP A 105' AC4 Software B 2GP 306 ? 11 'BINDING SITE FOR RESIDUE 2GP B 306' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 CAT 5 GLN A 92 ? GLN A 92 . ? 1_555 ? 2 CAT 5 GLU A 58 ? GLU A 58 . ? 1_555 ? 3 CAT 5 HIS A 40 ? HIS A 40 . ? 1_555 ? 4 CAT 5 TYR A 38 ? TYR A 38 . ? 1_555 ? 5 CAT 5 PHE A 100 ? PHE A 100 . ? 1_555 ? 6 AC1 6 GLN A 92 ? GLN A 92 . ? 5_646 ? 7 AC1 6 ALA A 95 ? ALA A 95 . ? 5_646 ? 8 AC1 6 HOH G . ? HOH A 108 . ? 5_646 ? 9 AC1 6 HOH G . ? HOH A 119 . ? 5_646 ? 10 AC1 6 GLN B 85 ? GLN B 85 . ? 1_555 ? 11 AC1 6 HOH H . ? HOH B 626 . ? 1_555 ? 12 AC2 5 TYR B 45 ? TYR B 45 . ? 8_666 ? 13 AC2 5 GLY B 47 ? GLY B 47 . ? 1_555 ? 14 AC2 5 ASP B 49 ? ASP B 49 . ? 1_555 ? 15 AC2 5 HOH H . ? HOH B 644 . ? 8_666 ? 16 AC2 5 HOH H . ? HOH B 671 . ? 8_666 ? 17 AC3 15 TYR A 38 ? TYR A 38 . ? 1_555 ? 18 AC3 15 HIS A 40 ? HIS A 40 . ? 1_555 ? 19 AC3 15 LYS A 41 ? LYS A 41 . ? 1_555 ? 20 AC3 15 TYR A 42 ? TYR A 42 . ? 1_555 ? 21 AC3 15 ASN A 43 ? ASN A 43 . ? 1_555 ? 22 AC3 15 ASN A 44 ? ASN A 44 . ? 1_555 ? 23 AC3 15 TYR A 45 ? TYR A 45 . ? 1_555 ? 24 AC3 15 GLU A 46 ? GLU A 46 . ? 1_555 ? 25 AC3 15 GLU A 58 ? GLU A 58 . ? 1_555 ? 26 AC3 15 ARG A 77 ? ARG A 77 . ? 1_555 ? 27 AC3 15 GLN A 92 ? GLN A 92 . ? 1_555 ? 28 AC3 15 ASN A 98 ? ASN A 98 . ? 1_555 ? 29 AC3 15 PHE A 100 ? PHE A 100 . ? 1_555 ? 30 AC3 15 HOH G . ? HOH A 132 . ? 1_555 ? 31 AC3 15 ASN B 83 ? ASN B 83 . ? 5_656 ? 32 AC4 11 TYR B 38 ? TYR B 38 . ? 1_555 ? 33 AC4 11 HIS B 40 ? HIS B 40 . ? 1_555 ? 34 AC4 11 LYS B 41 ? LYS B 41 . ? 1_555 ? 35 AC4 11 TYR B 42 ? TYR B 42 . ? 1_555 ? 36 AC4 11 ASN B 43 ? ASN B 43 . ? 1_555 ? 37 AC4 11 ASN B 44 ? ASN B 44 . ? 1_555 ? 38 AC4 11 TYR B 45 ? TYR B 45 . ? 1_555 ? 39 AC4 11 GLU B 46 ? GLU B 46 . ? 1_555 ? 40 AC4 11 GLU B 58 ? GLU B 58 . ? 1_555 ? 41 AC4 11 ASN B 98 ? ASN B 98 . ? 1_555 ? 42 AC4 11 PHE B 100 ? PHE B 100 . ? 1_555 ? # _database_PDB_matrix.entry_id 5BIR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 5BIR _atom_sites.fract_transf_matrix[1][1] 0.017126 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017126 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007497 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 CYS 2 2 2 CYS CYS A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 TYR 4 4 4 TYR TYR A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 ASN 9 9 9 ASN ASN A . n A 1 10 CYS 10 10 10 CYS CYS A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 GLN 20 20 20 GLN GLN A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 HIS 27 27 27 HIS HIS A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 TYR 38 38 38 TYR TYR A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 HIS 40 40 40 HIS HIS A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 TYR 42 42 42 TYR TYR A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 TYR 45 45 45 TYR TYR A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 PHE 48 48 48 PHE PHE A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 TYR 56 56 56 TYR TYR A . n A 1 57 TYR 57 57 57 TYR TYR A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 TRP 59 59 59 TRP TRP A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 TYR 68 68 68 TYR TYR A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 ASP 76 76 76 ASP ASP A . n A 1 77 ARG 77 77 77 ARG ARG A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 PHE 80 80 80 PHE PHE A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 GLN 85 85 85 GLN GLN A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 CYS 103 103 103 CYS CYS A . n A 1 104 THR 104 104 104 THR THR A . n B 1 1 ALA 1 1 1 ALA ALA B . n B 1 2 CYS 2 2 2 CYS CYS B . n B 1 3 ASP 3 3 3 ASP ASP B . n B 1 4 TYR 4 4 4 TYR TYR B . n B 1 5 THR 5 5 5 THR THR B . n B 1 6 CYS 6 6 6 CYS CYS B . n B 1 7 GLY 7 7 7 GLY GLY B . n B 1 8 SER 8 8 8 SER SER B . n B 1 9 ASN 9 9 9 ASN ASN B . n B 1 10 CYS 10 10 10 CYS CYS B . n B 1 11 TYR 11 11 11 TYR TYR B . n B 1 12 SER 12 12 12 SER SER B . n B 1 13 SER 13 13 13 SER SER B . n B 1 14 SER 14 14 14 SER SER B . n B 1 15 ASP 15 15 15 ASP ASP B . n B 1 16 VAL 16 16 16 VAL VAL B . n B 1 17 SER 17 17 17 SER SER B . n B 1 18 THR 18 18 18 THR THR B . n B 1 19 ALA 19 19 19 ALA ALA B . n B 1 20 GLN 20 20 20 GLN GLN B . n B 1 21 ALA 21 21 21 ALA ALA B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 GLY 23 23 23 GLY GLY B . n B 1 24 TYR 24 24 24 TYR TYR B . n B 1 25 LYS 25 25 25 LYS LYS B . n B 1 26 LEU 26 26 26 LEU LEU B . n B 1 27 HIS 27 27 27 HIS HIS B . n B 1 28 GLU 28 28 28 GLU GLU B . n B 1 29 ASP 29 29 29 ASP ASP B . n B 1 30 GLY 30 30 30 GLY GLY B . n B 1 31 GLU 31 31 31 GLU GLU B . n B 1 32 THR 32 32 32 THR THR B . n B 1 33 VAL 33 33 33 VAL VAL B . n B 1 34 GLY 34 34 34 GLY GLY B . n B 1 35 SER 35 35 35 SER SER B . n B 1 36 ASN 36 36 36 ASN ASN B . n B 1 37 SER 37 37 37 SER SER B . n B 1 38 TYR 38 38 38 TYR TYR B . n B 1 39 PRO 39 39 39 PRO PRO B . n B 1 40 HIS 40 40 40 HIS HIS B . n B 1 41 LYS 41 41 41 LYS LYS B . n B 1 42 TYR 42 42 42 TYR TYR B . n B 1 43 ASN 43 43 43 ASN ASN B . n B 1 44 ASN 44 44 44 ASN ASN B . n B 1 45 TYR 45 45 45 TYR TYR B . n B 1 46 GLU 46 46 46 GLU GLU B . n B 1 47 GLY 47 47 47 GLY GLY B . n B 1 48 PHE 48 48 48 PHE PHE B . n B 1 49 ASP 49 49 49 ASP ASP B . n B 1 50 PHE 50 50 50 PHE PHE B . n B 1 51 SER 51 51 51 SER SER B . n B 1 52 VAL 52 52 52 VAL VAL B . n B 1 53 SER 53 53 53 SER SER B . n B 1 54 SER 54 54 54 SER SER B . n B 1 55 PRO 55 55 55 PRO PRO B . n B 1 56 TYR 56 56 56 TYR TYR B . n B 1 57 TYR 57 57 57 TYR TYR B . n B 1 58 GLU 58 58 58 GLU GLU B . n B 1 59 TRP 59 59 59 TRP TRP B . n B 1 60 PRO 60 60 60 PRO PRO B . n B 1 61 ILE 61 61 61 ILE ILE B . n B 1 62 LEU 62 62 62 LEU LEU B . n B 1 63 SER 63 63 63 SER SER B . n B 1 64 SER 64 64 64 SER SER B . n B 1 65 GLY 65 65 65 GLY GLY B . n B 1 66 ASP 66 66 66 ASP ASP B . n B 1 67 VAL 67 67 67 VAL VAL B . n B 1 68 TYR 68 68 68 TYR TYR B . n B 1 69 SER 69 69 69 SER SER B . n B 1 70 GLY 70 70 70 GLY GLY B . n B 1 71 GLY 71 71 71 GLY GLY B . n B 1 72 SER 72 72 72 SER SER B . n B 1 73 PRO 73 73 73 PRO PRO B . n B 1 74 GLY 74 74 74 GLY GLY B . n B 1 75 ALA 75 75 75 ALA ALA B . n B 1 76 ASP 76 76 76 ASP ASP B . n B 1 77 ARG 77 77 77 ARG ARG B . n B 1 78 VAL 78 78 78 VAL VAL B . n B 1 79 VAL 79 79 79 VAL VAL B . n B 1 80 PHE 80 80 80 PHE PHE B . n B 1 81 ASN 81 81 81 ASN ASN B . n B 1 82 GLU 82 82 82 GLU GLU B . n B 1 83 ASN 83 83 83 ASN ASN B . n B 1 84 ASN 84 84 84 ASN ASN B . n B 1 85 GLN 85 85 85 GLN GLN B . n B 1 86 LEU 86 86 86 LEU LEU B . n B 1 87 ALA 87 87 87 ALA ALA B . n B 1 88 GLY 88 88 88 GLY GLY B . n B 1 89 VAL 89 89 89 VAL VAL B . n B 1 90 ILE 90 90 90 ILE ILE B . n B 1 91 THR 91 91 91 THR THR B . n B 1 92 GLN 92 92 92 GLN GLN B . n B 1 93 THR 93 93 93 THR THR B . n B 1 94 GLY 94 94 94 GLY GLY B . n B 1 95 ALA 95 95 95 ALA ALA B . n B 1 96 SER 96 96 96 SER SER B . n B 1 97 GLY 97 97 97 GLY GLY B . n B 1 98 ASN 98 98 98 ASN ASN B . n B 1 99 ASN 99 99 99 ASN ASN B . n B 1 100 PHE 100 100 100 PHE PHE B . n B 1 101 VAL 101 101 101 VAL VAL B . n B 1 102 GLU 102 102 102 GLU GLU B . n B 1 103 CYS 103 103 103 CYS CYS B . n B 1 104 THR 104 104 104 THR THR B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 2GP 1 105 105 2GP 2GP A . D 3 CA 1 501 501 CA CA B . E 3 CA 1 601 601 CA CA B . F 2 2GP 1 306 306 2GP 2GP B . G 4 HOH 1 106 2 HOH HOH A . G 4 HOH 2 107 3 HOH HOH A . G 4 HOH 3 108 4 HOH HOH A . G 4 HOH 4 109 5 HOH HOH A . G 4 HOH 5 110 9 HOH HOH A . G 4 HOH 6 111 12 HOH HOH A . G 4 HOH 7 112 13 HOH HOH A . G 4 HOH 8 113 14 HOH HOH A . G 4 HOH 9 114 15 HOH HOH A . G 4 HOH 10 115 16 HOH HOH A . G 4 HOH 11 116 19 HOH HOH A . G 4 HOH 12 117 21 HOH HOH A . G 4 HOH 13 118 23 HOH HOH A . G 4 HOH 14 119 28 HOH HOH A . G 4 HOH 15 120 35 HOH HOH A . G 4 HOH 16 121 36 HOH HOH A . G 4 HOH 17 122 37 HOH HOH A . G 4 HOH 18 123 40 HOH HOH A . G 4 HOH 19 124 41 HOH HOH A . G 4 HOH 20 125 42 HOH HOH A . G 4 HOH 21 126 49 HOH HOH A . G 4 HOH 22 127 52 HOH HOH A . G 4 HOH 23 128 54 HOH HOH A . G 4 HOH 24 129 58 HOH HOH A . G 4 HOH 25 130 62 HOH HOH A . G 4 HOH 26 131 65 HOH HOH A . G 4 HOH 27 132 68 HOH HOH A . G 4 HOH 28 133 75 HOH HOH A . G 4 HOH 29 134 82 HOH HOH A . G 4 HOH 30 135 85 HOH HOH A . G 4 HOH 31 136 89 HOH HOH A . G 4 HOH 32 137 91 HOH HOH A . G 4 HOH 33 138 94 HOH HOH A . G 4 HOH 34 139 99 HOH HOH A . G 4 HOH 35 140 100 HOH HOH A . G 4 HOH 36 141 101 HOH HOH A . G 4 HOH 37 142 102 HOH HOH A . G 4 HOH 38 143 104 HOH HOH A . G 4 HOH 39 144 106 HOH HOH A . G 4 HOH 40 145 113 HOH HOH A . G 4 HOH 41 146 115 HOH HOH A . G 4 HOH 42 147 119 HOH HOH A . G 4 HOH 43 148 121 HOH HOH A . G 4 HOH 44 149 122 HOH HOH A . G 4 HOH 45 150 124 HOH HOH A . G 4 HOH 46 151 125 HOH HOH A . G 4 HOH 47 152 126 HOH HOH A . G 4 HOH 48 153 130 HOH HOH A . G 4 HOH 49 154 131 HOH HOH A . G 4 HOH 50 155 132 HOH HOH A . G 4 HOH 51 156 134 HOH HOH A . G 4 HOH 52 157 135 HOH HOH A . G 4 HOH 53 158 136 HOH HOH A . G 4 HOH 54 159 137 HOH HOH A . H 4 HOH 1 602 1 HOH HOH B . H 4 HOH 2 603 6 HOH HOH B . H 4 HOH 3 604 7 HOH HOH B . H 4 HOH 4 605 8 HOH HOH B . H 4 HOH 5 606 10 HOH HOH B . H 4 HOH 6 607 11 HOH HOH B . H 4 HOH 7 608 17 HOH HOH B . H 4 HOH 8 609 18 HOH HOH B . H 4 HOH 9 610 20 HOH HOH B . H 4 HOH 10 611 22 HOH HOH B . H 4 HOH 11 612 24 HOH HOH B . H 4 HOH 12 613 25 HOH HOH B . H 4 HOH 13 614 26 HOH HOH B . H 4 HOH 14 615 27 HOH HOH B . H 4 HOH 15 616 29 HOH HOH B . H 4 HOH 16 617 30 HOH HOH B . H 4 HOH 17 618 31 HOH HOH B . H 4 HOH 18 619 32 HOH HOH B . H 4 HOH 19 620 33 HOH HOH B . H 4 HOH 20 621 34 HOH HOH B . H 4 HOH 21 622 38 HOH HOH B . H 4 HOH 22 623 39 HOH HOH B . H 4 HOH 23 624 43 HOH HOH B . H 4 HOH 24 625 44 HOH HOH B . H 4 HOH 25 626 45 HOH HOH B . H 4 HOH 26 627 46 HOH HOH B . H 4 HOH 27 628 47 HOH HOH B . H 4 HOH 28 629 48 HOH HOH B . H 4 HOH 29 630 50 HOH HOH B . H 4 HOH 30 631 51 HOH HOH B . H 4 HOH 31 632 53 HOH HOH B . H 4 HOH 32 633 55 HOH HOH B . H 4 HOH 33 634 56 HOH HOH B . H 4 HOH 34 635 57 HOH HOH B . H 4 HOH 35 636 59 HOH HOH B . H 4 HOH 36 637 60 HOH HOH B . H 4 HOH 37 638 61 HOH HOH B . H 4 HOH 38 639 63 HOH HOH B . H 4 HOH 39 640 64 HOH HOH B . H 4 HOH 40 641 66 HOH HOH B . H 4 HOH 41 642 67 HOH HOH B . H 4 HOH 42 643 69 HOH HOH B . H 4 HOH 43 644 70 HOH HOH B . H 4 HOH 44 645 71 HOH HOH B . H 4 HOH 45 646 72 HOH HOH B . H 4 HOH 46 647 73 HOH HOH B . H 4 HOH 47 648 74 HOH HOH B . H 4 HOH 48 649 76 HOH HOH B . H 4 HOH 49 650 77 HOH HOH B . H 4 HOH 50 651 78 HOH HOH B . H 4 HOH 51 652 79 HOH HOH B . H 4 HOH 52 653 80 HOH HOH B . H 4 HOH 53 654 81 HOH HOH B . H 4 HOH 54 655 83 HOH HOH B . H 4 HOH 55 656 84 HOH HOH B . H 4 HOH 56 657 86 HOH HOH B . H 4 HOH 57 658 87 HOH HOH B . H 4 HOH 58 659 88 HOH HOH B . H 4 HOH 59 660 90 HOH HOH B . H 4 HOH 60 661 92 HOH HOH B . H 4 HOH 61 662 93 HOH HOH B . H 4 HOH 62 663 95 HOH HOH B . H 4 HOH 63 664 96 HOH HOH B . H 4 HOH 64 665 97 HOH HOH B . H 4 HOH 65 666 98 HOH HOH B . H 4 HOH 66 667 103 HOH HOH B . H 4 HOH 67 668 105 HOH HOH B . H 4 HOH 68 669 107 HOH HOH B . H 4 HOH 69 670 108 HOH HOH B . H 4 HOH 70 671 109 HOH HOH B . H 4 HOH 71 672 110 HOH HOH B . H 4 HOH 72 673 111 HOH HOH B . H 4 HOH 73 674 112 HOH HOH B . H 4 HOH 74 675 114 HOH HOH B . H 4 HOH 75 676 116 HOH HOH B . H 4 HOH 76 677 117 HOH HOH B . H 4 HOH 77 678 118 HOH HOH B . H 4 HOH 78 679 120 HOH HOH B . H 4 HOH 79 680 123 HOH HOH B . H 4 HOH 80 681 127 HOH HOH B . H 4 HOH 81 682 128 HOH HOH B . H 4 HOH 82 683 129 HOH HOH B . H 4 HOH 83 684 133 HOH HOH B . H 4 HOH 84 685 138 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_defined_assembly ? monomeric 1 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,G 2 1 B,D,E,F,H 3 1,2 B,D,E,F,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 2370 ? 3 MORE -28 ? 3 'SSA (A^2)' 9870 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_666 -y+1,-x+1,-z+3/2 0.0000000000 -1.0000000000 0.0000000000 58.3900000000 -1.0000000000 0.0000000000 0.0000000000 58.3900000000 0.0000000000 0.0000000000 -1.0000000000 200.0850000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 602 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id H _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A GLN 92 ? A GLN 92 ? 5_646 CA ? D CA . ? B CA 501 ? 1_555 O ? A ALA 95 ? A ALA 95 ? 5_646 96.0 ? 2 O ? A GLN 92 ? A GLN 92 ? 5_646 CA ? D CA . ? B CA 501 ? 1_555 O ? G HOH . ? A HOH 108 ? 5_646 164.5 ? 3 O ? A ALA 95 ? A ALA 95 ? 5_646 CA ? D CA . ? B CA 501 ? 1_555 O ? G HOH . ? A HOH 108 ? 5_646 88.0 ? 4 O ? A GLN 92 ? A GLN 92 ? 5_646 CA ? D CA . ? B CA 501 ? 1_555 O ? G HOH . ? A HOH 119 ? 5_646 82.3 ? 5 O ? A ALA 95 ? A ALA 95 ? 5_646 CA ? D CA . ? B CA 501 ? 1_555 O ? G HOH . ? A HOH 119 ? 5_646 91.9 ? 6 O ? G HOH . ? A HOH 108 ? 5_646 CA ? D CA . ? B CA 501 ? 1_555 O ? G HOH . ? A HOH 119 ? 5_646 82.6 ? 7 O ? A GLN 92 ? A GLN 92 ? 5_646 CA ? D CA . ? B CA 501 ? 1_555 OE1 ? B GLN 85 ? B GLN 85 ? 1_555 82.2 ? 8 O ? A ALA 95 ? A ALA 95 ? 5_646 CA ? D CA . ? B CA 501 ? 1_555 OE1 ? B GLN 85 ? B GLN 85 ? 1_555 160.0 ? 9 O ? G HOH . ? A HOH 108 ? 5_646 CA ? D CA . ? B CA 501 ? 1_555 OE1 ? B GLN 85 ? B GLN 85 ? 1_555 99.0 ? 10 O ? G HOH . ? A HOH 119 ? 5_646 CA ? D CA . ? B CA 501 ? 1_555 OE1 ? B GLN 85 ? B GLN 85 ? 1_555 107.5 ? 11 O ? A GLN 92 ? A GLN 92 ? 5_646 CA ? D CA . ? B CA 501 ? 1_555 O ? H HOH . ? B HOH 626 ? 1_555 92.2 ? 12 O ? A ALA 95 ? A ALA 95 ? 5_646 CA ? D CA . ? B CA 501 ? 1_555 O ? H HOH . ? B HOH 626 ? 1_555 74.4 ? 13 O ? G HOH . ? A HOH 108 ? 5_646 CA ? D CA . ? B CA 501 ? 1_555 O ? H HOH . ? B HOH 626 ? 1_555 103.3 ? 14 O ? G HOH . ? A HOH 119 ? 5_646 CA ? D CA . ? B CA 501 ? 1_555 O ? H HOH . ? B HOH 626 ? 1_555 164.6 ? 15 OE1 ? B GLN 85 ? B GLN 85 ? 1_555 CA ? D CA . ? B CA 501 ? 1_555 O ? H HOH . ? B HOH 626 ? 1_555 85.8 ? 16 O ? B TYR 45 ? B TYR 45 ? 8_666 CA ? E CA . ? B CA 601 ? 1_555 O ? B GLY 47 ? B GLY 47 ? 1_555 79.3 ? 17 O ? B TYR 45 ? B TYR 45 ? 8_666 CA ? E CA . ? B CA 601 ? 1_555 OD1 ? B ASP 49 ? B ASP 49 ? 1_555 98.2 ? 18 O ? B GLY 47 ? B GLY 47 ? 1_555 CA ? E CA . ? B CA 601 ? 1_555 OD1 ? B ASP 49 ? B ASP 49 ? 1_555 86.5 ? 19 O ? B TYR 45 ? B TYR 45 ? 8_666 CA ? E CA . ? B CA 601 ? 1_555 O ? H HOH . ? B HOH 644 ? 8_666 87.3 ? 20 O ? B GLY 47 ? B GLY 47 ? 1_555 CA ? E CA . ? B CA 601 ? 1_555 O ? H HOH . ? B HOH 644 ? 8_666 98.3 ? 21 OD1 ? B ASP 49 ? B ASP 49 ? 1_555 CA ? E CA . ? B CA 601 ? 1_555 O ? H HOH . ? B HOH 644 ? 8_666 173.3 ? 22 O ? B TYR 45 ? B TYR 45 ? 8_666 CA ? E CA . ? B CA 601 ? 1_555 O ? H HOH . ? B HOH 671 ? 8_666 86.1 ? 23 O ? B GLY 47 ? B GLY 47 ? 1_555 CA ? E CA . ? B CA 601 ? 1_555 O ? H HOH . ? B HOH 671 ? 8_666 162.5 ? 24 OD1 ? B ASP 49 ? B ASP 49 ? 1_555 CA ? E CA . ? B CA 601 ? 1_555 O ? H HOH . ? B HOH 671 ? 8_666 86.1 ? 25 O ? H HOH . ? B HOH 644 ? 8_666 CA ? E CA . ? B CA 601 ? 1_555 O ? H HOH . ? B HOH 671 ? 8_666 90.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-12-31 2 'Structure model' 1 1 2008-03-03 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-04-18 5 'Structure model' 1 4 2021-11-03 6 'Structure model' 1 5 2023-08-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' Other 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' diffrn_detector 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' software 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_struct_conn_angle 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_ref_seq_dif 8 5 'Structure model' struct_site 9 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_diffrn_detector.detector' 2 4 'Structure model' '_pdbx_database_status.process_site' 3 4 'Structure model' '_software.name' 4 5 'Structure model' '_database_2.pdbx_DOI' 5 5 'Structure model' '_database_2.pdbx_database_accession' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 24 5 'Structure model' '_pdbx_struct_conn_angle.value' 25 5 'Structure model' '_struct_conn.pdbx_dist_value' 26 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 27 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 28 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 29 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 30 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 32 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 33 5 'Structure model' '_struct_conn.ptnr1_symmetry' 34 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 35 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 36 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 37 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 38 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 39 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 40 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 41 5 'Structure model' '_struct_conn.ptnr2_symmetry' 42 5 'Structure model' '_struct_ref_seq_dif.details' 43 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 44 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 45 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Agrovata 'data collection' . ? 1 ROTAVATA 'data reduction' . ? 2 X-PLOR 'model building' 3.851 ? 3 X-PLOR refinement 3.851 ? 4 CCP4 'data scaling' '(AGROVATA' ? 5 ROTAVATA 'data scaling' . ? 6 X-PLOR phasing 3.851 ? 7 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 651 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 685 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.10 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CA A CYS 10 ? ? CB A CYS 10 ? ? 1.400 1.526 -0.126 0.013 N 2 1 CB A CYS 10 ? ? SG A CYS 10 ? ? 1.715 1.812 -0.097 0.016 N 3 1 CE2 A TYR 11 ? ? CD2 A TYR 11 ? ? 1.486 1.389 0.097 0.015 N 4 1 CG A GLU 28 ? ? CD A GLU 28 ? ? 1.665 1.515 0.150 0.015 N 5 1 CD1 A TYR 45 ? ? CE1 A TYR 45 ? ? 1.507 1.389 0.118 0.015 N 6 1 CG A PHE 50 ? ? CD1 A PHE 50 ? ? 1.474 1.383 0.091 0.015 N 7 1 CG A TYR 56 ? ? CD1 A TYR 56 ? ? 1.472 1.387 0.085 0.013 N 8 1 CD1 A TYR 56 ? ? CE1 A TYR 56 ? ? 1.496 1.389 0.107 0.015 N 9 1 CE1 A TYR 57 ? ? CZ A TYR 57 ? ? 1.461 1.381 0.080 0.013 N 10 1 CG B TYR 24 ? ? CD1 B TYR 24 ? ? 1.467 1.387 0.080 0.013 N 11 1 CB B VAL 79 ? ? CG2 B VAL 79 ? ? 1.384 1.524 -0.140 0.021 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB B LEU 26 ? ? CG B LEU 26 ? ? CD1 B LEU 26 ? ? 98.72 111.00 -12.28 1.70 N 2 1 CB B ASP 49 ? ? CG B ASP 49 ? ? OD1 B ASP 49 ? ? 126.09 118.30 7.79 0.90 N 3 1 C B GLY 70 ? ? N B GLY 71 ? ? CA B GLY 71 ? ? 103.08 122.30 -19.22 2.10 Y # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 37 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 51.15 _pdbx_validate_torsion.psi 70.10 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 PRO A 39 ? ? 10.92 2 1 PRO A 55 ? ? 10.79 3 1 PRO B 39 ? ? 11.80 4 1 PRO B 55 ? ? 10.63 5 1 SER B 63 ? ? -10.72 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 TYR A 42 ? ? 0.079 'SIDE CHAIN' 2 1 HIS B 27 ? ? 0.098 'SIDE CHAIN' 3 1 TYR B 42 ? ? 0.069 'SIDE CHAIN' 4 1 TYR B 57 ? ? 0.066 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 49 ? CG ? A ASP 49 CG 2 1 Y 1 A ASP 49 ? OD1 ? A ASP 49 OD1 3 1 Y 1 A ASP 49 ? OD2 ? A ASP 49 OD2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-2'-MONOPHOSPHATE" 2GP 3 'CALCIUM ION' CA 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2AAD _pdbx_initial_refinement_model.details 'PDB ENTRY 2AAD' #