HEADER TRANSCRIPTION 25-SEP-15 5DZI TITLE CRYSTAL STRUCTURE OF THE ER-ALPHA LIGAND-BINDING DOMAIN IN COMPLEX TITLE 2 WITH THE CYCLOFENIL DERIVATIVE 4,4'-{[(3S)-3-(2-HYDROXYETHYL) TITLE 3 CYCLOHEXYLIDENE]METHANEDIYL}DIPHENOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTROGEN RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: LIGAND-BINDING DOMAIN; COMPND 5 SYNONYM: ER,ER-ALPHA,ESTRADIOL RECEPTOR,NUCLEAR RECEPTOR SUBFAMILY 3 COMPND 6 GROUP A MEMBER 1; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: NUCLEAR RECEPTOR COACTIVATOR 2; COMPND 11 CHAIN: C, D; COMPND 12 FRAGMENT: NUCLEAR RECEPTOR-INTERACTING PEPTIDE; COMPND 13 SYNONYM: NCOA-2,CLASS E BASIC HELIX-LOOP-HELIX PROTEIN 75,BHLHE75, COMPND 14 TRANSCRIPTIONAL INTERMEDIARY FACTOR 2,HTIF2; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ESR1, ESR, NR3A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606 KEYWDS NUCLEAR RECEPTOR, TRANSCRIPTION FACTOR, LIGAND BINDING, PROTEIN- KEYWDS 2 LIGAND COMPLEX, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR J.C.NWACHUKWU,S.SRINIVASAN,Y.ZHENG,S.WANG,J.MIN,C.DONG,Z.LIAO, AUTHOR 2 V.CAVETT,J.NOWAK,R.HOUTMAN,K.E.CARLSON,J.S.JOSAN,O.ELEMENTO, AUTHOR 3 J.A.KATZENELLENBOGEN,H.B.ZHOU,K.W.NETTLES REVDAT 2 27-SEP-23 5DZI 1 REMARK REVDAT 1 04-MAY-16 5DZI 0 JRNL AUTH J.C.NWACHUKWU,S.SRINIVASAN,Y.ZHENG,S.WANG,J.MIN,C.DONG, JRNL AUTH 2 Z.LIAO,J.NOWAK,N.J.WRIGHT,R.HOUTMAN,K.E.CARLSON,J.S.JOSAN, JRNL AUTH 3 O.ELEMENTO,J.A.KATZENELLENBOGEN,H.B.ZHOU,K.W.NETTLES JRNL TITL PREDICTIVE FEATURES OF LIGAND-SPECIFIC SIGNALING THROUGH THE JRNL TITL 2 ESTROGEN RECEPTOR. JRNL REF MOL.SYST.BIOL. V. 12 864 2016 JRNL REFN ESSN 1744-4292 JRNL PMID 27107013 JRNL DOI 10.15252/MSB.20156701 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 3 NUMBER OF REFLECTIONS : 38636 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1932 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.4142 - 4.5160 0.98 2804 151 0.1558 0.1675 REMARK 3 2 4.5160 - 3.5849 0.98 2742 143 0.1427 0.1756 REMARK 3 3 3.5849 - 3.1318 1.00 2778 141 0.1779 0.2273 REMARK 3 4 3.1318 - 2.8455 0.99 2799 147 0.1904 0.2499 REMARK 3 5 2.8455 - 2.6416 0.95 2645 129 0.1953 0.2375 REMARK 3 6 2.6416 - 2.4859 0.98 2726 149 0.1895 0.2619 REMARK 3 7 2.4859 - 2.3614 0.98 2718 143 0.1944 0.2326 REMARK 3 8 2.3614 - 2.2586 0.97 2669 145 0.1905 0.2250 REMARK 3 9 2.2586 - 2.1716 0.96 2654 140 0.1959 0.2359 REMARK 3 10 2.1716 - 2.0967 0.93 2580 139 0.2021 0.2341 REMARK 3 11 2.0967 - 2.0311 0.92 2565 133 0.2071 0.2498 REMARK 3 12 2.0311 - 1.9731 0.91 2519 137 0.2273 0.2601 REMARK 3 13 1.9731 - 1.9211 0.89 2463 133 0.2328 0.3030 REMARK 3 14 1.9211 - 1.8743 0.74 2042 102 0.2579 0.2983 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4081 REMARK 3 ANGLE : 0.892 5528 REMARK 3 CHIRALITY : 0.034 649 REMARK 3 PLANARITY : 0.004 686 REMARK 3 DIHEDRAL : 14.967 1518 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 304 THROUGH 321 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4436 18.5345 59.5333 REMARK 3 T TENSOR REMARK 3 T11: 0.3268 T22: 0.4249 REMARK 3 T33: 0.3663 T12: -0.0681 REMARK 3 T13: -0.0249 T23: -0.0647 REMARK 3 L TENSOR REMARK 3 L11: 5.6158 L22: 8.4924 REMARK 3 L33: 6.5066 L12: 1.3698 REMARK 3 L13: 1.3922 L23: -0.3066 REMARK 3 S TENSOR REMARK 3 S11: 0.3081 S12: -0.4935 S13: 0.8493 REMARK 3 S21: 0.6628 S22: -0.4277 S23: -0.1738 REMARK 3 S31: -0.2555 S32: 0.1169 S33: 0.0861 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 322 THROUGH 338 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.3487 -7.5235 61.7939 REMARK 3 T TENSOR REMARK 3 T11: 0.4339 T22: 0.4555 REMARK 3 T33: 0.4808 T12: -0.0268 REMARK 3 T13: 0.0553 T23: -0.0058 REMARK 3 L TENSOR REMARK 3 L11: 0.1919 L22: 6.9162 REMARK 3 L33: 4.3505 L12: -0.5410 REMARK 3 L13: 0.2353 L23: 2.9750 REMARK 3 S TENSOR REMARK 3 S11: 0.1967 S12: -0.2989 S13: -0.2284 REMARK 3 S21: 0.6948 S22: -0.6863 S23: 1.0236 REMARK 3 S31: 0.8606 S32: -0.3560 S33: 0.4901 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 339 THROUGH 394 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1826 6.7522 52.7497 REMARK 3 T TENSOR REMARK 3 T11: 0.2307 T22: 0.2544 REMARK 3 T33: 0.2110 T12: 0.0078 REMARK 3 T13: 0.0228 T23: -0.0121 REMARK 3 L TENSOR REMARK 3 L11: 2.5746 L22: 3.0617 REMARK 3 L33: 2.0844 L12: 0.0223 REMARK 3 L13: -0.4692 L23: -1.2790 REMARK 3 S TENSOR REMARK 3 S11: 0.0866 S12: 0.0282 S13: 0.1852 REMARK 3 S21: 0.2048 S22: 0.0034 S23: 0.0993 REMARK 3 S31: -0.1748 S32: -0.1883 S33: -0.0692 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 395 THROUGH 411 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.5297 -10.3188 57.8365 REMARK 3 T TENSOR REMARK 3 T11: 0.3362 T22: 0.2462 REMARK 3 T33: 0.3128 T12: 0.0225 REMARK 3 T13: 0.0484 T23: 0.0530 REMARK 3 L TENSOR REMARK 3 L11: 8.9269 L22: 5.3125 REMARK 3 L33: 5.4017 L12: -2.1777 REMARK 3 L13: -3.3094 L23: -1.4816 REMARK 3 S TENSOR REMARK 3 S11: -0.2896 S12: -0.5192 S13: -1.0080 REMARK 3 S21: 0.2795 S22: 0.0507 S23: 0.0137 REMARK 3 S31: 0.5508 S32: 0.0474 S33: 0.2358 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 412 THROUGH 472 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6642 -1.7363 48.9322 REMARK 3 T TENSOR REMARK 3 T11: 0.2436 T22: 0.2479 REMARK 3 T33: 0.1962 T12: 0.0126 REMARK 3 T13: 0.0703 T23: -0.0088 REMARK 3 L TENSOR REMARK 3 L11: 3.9629 L22: 4.8334 REMARK 3 L33: 3.0117 L12: 0.3578 REMARK 3 L13: -0.0182 L23: 0.6799 REMARK 3 S TENSOR REMARK 3 S11: -0.0228 S12: 0.0391 S13: -0.3370 REMARK 3 S21: -0.0262 S22: -0.0858 S23: -0.0243 REMARK 3 S31: 0.3088 S32: 0.0071 S33: 0.1181 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 473 THROUGH 496 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.7698 13.8699 51.4975 REMARK 3 T TENSOR REMARK 3 T11: 0.2692 T22: 0.2681 REMARK 3 T33: 0.2906 T12: -0.0771 REMARK 3 T13: -0.0315 T23: -0.0381 REMARK 3 L TENSOR REMARK 3 L11: 9.0322 L22: 3.0215 REMARK 3 L33: 4.2520 L12: -2.8027 REMARK 3 L13: 1.4930 L23: -0.5807 REMARK 3 S TENSOR REMARK 3 S11: 0.0185 S12: -0.4612 S13: 0.3936 REMARK 3 S21: 0.2519 S22: 0.0088 S23: -0.2099 REMARK 3 S31: -0.3107 S32: 0.0494 S33: -0.0313 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 497 THROUGH 530 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.3078 0.8865 43.4080 REMARK 3 T TENSOR REMARK 3 T11: 0.3081 T22: 0.2170 REMARK 3 T33: 0.2072 T12: 0.0012 REMARK 3 T13: 0.0284 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 2.1819 L22: 2.4608 REMARK 3 L33: 3.1860 L12: 1.7136 REMARK 3 L13: 1.7977 L23: 0.7532 REMARK 3 S TENSOR REMARK 3 S11: 0.0912 S12: -0.0551 S13: -0.0946 REMARK 3 S21: -0.0133 S22: -0.0780 S23: 0.0634 REMARK 3 S31: 0.2522 S32: -0.1731 S33: -0.0076 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 531 THROUGH 548 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.2820 3.1204 45.7809 REMARK 3 T TENSOR REMARK 3 T11: 0.3640 T22: 0.5396 REMARK 3 T33: 0.5044 T12: -0.0774 REMARK 3 T13: -0.0388 T23: -0.0368 REMARK 3 L TENSOR REMARK 3 L11: 7.4898 L22: 5.1326 REMARK 3 L33: 7.9400 L12: 0.2335 REMARK 3 L13: 0.1112 L23: 1.8040 REMARK 3 S TENSOR REMARK 3 S11: -0.0166 S12: 0.6255 S13: -0.4634 REMARK 3 S21: 0.0036 S22: -0.0999 S23: 0.6921 REMARK 3 S31: 0.8132 S32: -1.5298 S33: 0.1050 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 306 THROUGH 338 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.7594 5.5146 18.9399 REMARK 3 T TENSOR REMARK 3 T11: 0.3161 T22: 0.2711 REMARK 3 T33: 0.3014 T12: -0.0595 REMARK 3 T13: 0.0568 T23: 0.0048 REMARK 3 L TENSOR REMARK 3 L11: 4.2866 L22: 1.8099 REMARK 3 L33: 3.4655 L12: 0.0946 REMARK 3 L13: 0.0054 L23: 0.2461 REMARK 3 S TENSOR REMARK 3 S11: 0.0904 S12: 0.3604 S13: -0.1303 REMARK 3 S21: -0.2523 S22: -0.0065 S23: -0.1433 REMARK 3 S31: 0.1787 S32: 0.2345 S33: -0.1788 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 339 THROUGH 455 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5927 5.6111 24.4562 REMARK 3 T TENSOR REMARK 3 T11: 0.2113 T22: 0.2220 REMARK 3 T33: 0.1705 T12: -0.0068 REMARK 3 T13: 0.0282 T23: 0.0150 REMARK 3 L TENSOR REMARK 3 L11: 2.2326 L22: 2.8233 REMARK 3 L33: 4.4406 L12: -0.2481 REMARK 3 L13: 0.1377 L23: -0.4953 REMARK 3 S TENSOR REMARK 3 S11: -0.0720 S12: 0.0761 S13: 0.0272 REMARK 3 S21: -0.0250 S22: 0.0599 S23: 0.0452 REMARK 3 S31: -0.1756 S32: -0.1447 S33: 0.0201 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 456 THROUGH 469 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6079 -11.4574 39.4198 REMARK 3 T TENSOR REMARK 3 T11: 0.9233 T22: 0.5482 REMARK 3 T33: 0.5922 T12: -0.0072 REMARK 3 T13: 0.1211 T23: 0.1118 REMARK 3 L TENSOR REMARK 3 L11: 6.0181 L22: 7.4500 REMARK 3 L33: 2.2652 L12: -4.1960 REMARK 3 L13: -0.7693 L23: 3.5355 REMARK 3 S TENSOR REMARK 3 S11: -0.4256 S12: -0.3976 S13: -1.0034 REMARK 3 S21: 1.0717 S22: -0.0986 S23: -0.2377 REMARK 3 S31: 0.8333 S32: -0.0597 S33: 0.3709 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 470 THROUGH 496 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8508 3.1912 38.4726 REMARK 3 T TENSOR REMARK 3 T11: 0.1708 T22: 0.3805 REMARK 3 T33: 0.2711 T12: 0.0266 REMARK 3 T13: 0.0054 T23: 0.0418 REMARK 3 L TENSOR REMARK 3 L11: 5.8584 L22: 2.0646 REMARK 3 L33: 6.7061 L12: 2.1438 REMARK 3 L13: 0.9320 L23: 2.2785 REMARK 3 S TENSOR REMARK 3 S11: 0.0599 S12: -0.1569 S13: -0.3298 REMARK 3 S21: -0.0253 S22: -0.2395 S23: -0.7187 REMARK 3 S31: 0.3345 S32: 0.6760 S33: 0.2006 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 497 THROUGH 548 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.7555 2.4360 30.8917 REMARK 3 T TENSOR REMARK 3 T11: 0.2465 T22: 0.2311 REMARK 3 T33: 0.2433 T12: -0.0017 REMARK 3 T13: 0.0195 T23: 0.0140 REMARK 3 L TENSOR REMARK 3 L11: 2.2848 L22: 2.1452 REMARK 3 L33: 4.3022 L12: 0.2210 REMARK 3 L13: 0.7225 L23: 0.8403 REMARK 3 S TENSOR REMARK 3 S11: -0.0450 S12: 0.1967 S13: -0.0974 REMARK 3 S21: -0.1591 S22: -0.0571 S23: 0.2536 REMARK 3 S31: 0.1755 S32: -0.3935 S33: 0.1563 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 686 THROUGH 698 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.9985 16.7544 54.0318 REMARK 3 T TENSOR REMARK 3 T11: 0.3716 T22: 0.3753 REMARK 3 T33: 0.5213 T12: 0.0458 REMARK 3 T13: 0.0532 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 4.5332 L22: 2.0664 REMARK 3 L33: 7.6341 L12: 1.9184 REMARK 3 L13: 0.7893 L23: 2.2174 REMARK 3 S TENSOR REMARK 3 S11: 0.4006 S12: -0.0477 S13: 0.4818 REMARK 3 S21: 0.0489 S22: -0.6005 S23: 0.3387 REMARK 3 S31: -0.1858 S32: -0.5321 S33: 0.1881 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 687 THROUGH 696 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.2849 -14.8598 19.7170 REMARK 3 T TENSOR REMARK 3 T11: 0.8040 T22: 0.4280 REMARK 3 T33: 0.5331 T12: 0.0500 REMARK 3 T13: 0.0738 T23: -0.0736 REMARK 3 L TENSOR REMARK 3 L11: 5.0011 L22: 6.4514 REMARK 3 L33: 5.4702 L12: 0.6109 REMARK 3 L13: 5.0563 L23: 2.1602 REMARK 3 S TENSOR REMARK 3 S11: 0.0458 S12: 1.0747 S13: -1.5354 REMARK 3 S21: -1.0773 S22: 0.0758 S23: -0.2502 REMARK 3 S31: 1.6941 S32: 0.6950 S33: -0.0394 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5DZI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000214070. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : SIDE SCATTERING BENT CUBE I-BEAM REMARK 200 SINGLE CRYSTAL ASYMMETRIC CUT REMARK 200 4.965 DEGS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40073 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.890 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.89 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.83800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2B1V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 3350, 0.05M MGCL2, 0.067M REMARK 280 NACL, 0.1M TRIS, PH 8.3, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.17450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 298 REMARK 465 LYS A 299 REMARK 465 ARG A 300 REMARK 465 SER A 301 REMARK 465 LYS A 302 REMARK 465 LYS A 303 REMARK 465 LEU A 462 REMARK 465 SER A 463 REMARK 465 SER A 464 REMARK 465 THR A 465 REMARK 465 LEU A 466 REMARK 465 LYS A 467 REMARK 465 SER A 468 REMARK 465 LEU A 469 REMARK 465 GLU A 470 REMARK 465 GLU A 471 REMARK 465 LEU A 549 REMARK 465 HIS A 550 REMARK 465 ALA A 551 REMARK 465 PRO A 552 REMARK 465 THR A 553 REMARK 465 SER A 554 REMARK 465 ILE B 298 REMARK 465 LYS B 299 REMARK 465 ARG B 300 REMARK 465 SER B 301 REMARK 465 LYS B 302 REMARK 465 LYS B 303 REMARK 465 ASN B 304 REMARK 465 SER B 305 REMARK 465 SER B 463 REMARK 465 SER B 464 REMARK 465 THR B 465 REMARK 465 LEU B 466 REMARK 465 LEU B 549 REMARK 465 HIS B 550 REMARK 465 ALA B 551 REMARK 465 PRO B 552 REMARK 465 THR B 553 REMARK 465 SER B 554 REMARK 465 SER C 699 REMARK 465 LYS D 686 REMARK 465 SER D 697 REMARK 465 SER D 698 REMARK 465 SER D 699 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 304 CG OD1 ND2 REMARK 470 HIS A 373 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 419 CG CD OE1 OE2 REMARK 470 GLU A 423 CG CD OE1 OE2 REMARK 470 LYS A 472 CG CD CE NZ REMARK 470 ARG A 477 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 531 CG CD CE NZ REMARK 470 ARG A 548 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 306 CG CD1 CD2 REMARK 470 GLU B 419 CG CD OE1 OE2 REMARK 470 MET B 437 CG SD CE REMARK 470 LEU B 462 CG CD1 CD2 REMARK 470 LYS B 467 CG CD CE NZ REMARK 470 GLU B 470 CG CD OE1 OE2 REMARK 470 GLU B 471 CG CD OE1 OE2 REMARK 470 LYS B 531 CG CD CE NZ REMARK 470 LYS C 686 CG CD CE NZ REMARK 470 HIS D 687 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS A 381 O HOH A 1121 1.96 REMARK 500 O VAL B 368 O HOH B 1001 2.01 REMARK 500 O HOH A 1125 O HOH B 1130 2.14 REMARK 500 O HOH B 1099 O HOH B 1131 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 468 -98.36 -9.78 REMARK 500 LEU B 469 -11.17 63.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5KF A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5KF B 900 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5DZH RELATED DB: PDB REMARK 900 5DZH CONTAINS THE SAME PROTEIN COMPLEXED WITH A DIFFERENT REMARK 900 CYCLOFENIL DERIVATIVE REMARK 900 RELATED ID: 5DXR RELATED DB: PDB REMARK 900 5DXR CONTAINS THE SAME PROTEIN COMPLEXED WITH A DIFFERENT REMARK 900 CYCLOFENIL DERIVATIVE DBREF 5DZI A 298 554 UNP P03372 ESR1_HUMAN 298 554 DBREF 5DZI B 298 554 UNP P03372 ESR1_HUMAN 298 554 DBREF 5DZI C 686 699 UNP Q15596 NCOA2_HUMAN 686 699 DBREF 5DZI D 686 699 UNP Q15596 NCOA2_HUMAN 686 699 SEQADV 5DZI SER A 537 UNP P03372 TYR 537 ENGINEERED MUTATION SEQADV 5DZI SER B 537 UNP P03372 TYR 537 ENGINEERED MUTATION SEQRES 1 A 257 ILE LYS ARG SER LYS LYS ASN SER LEU ALA LEU SER LEU SEQRES 2 A 257 THR ALA ASP GLN MET VAL SER ALA LEU LEU ASP ALA GLU SEQRES 3 A 257 PRO PRO ILE LEU TYR SER GLU TYR ASP PRO THR ARG PRO SEQRES 4 A 257 PHE SER GLU ALA SER MET MET GLY LEU LEU THR ASN LEU SEQRES 5 A 257 ALA ASP ARG GLU LEU VAL HIS MET ILE ASN TRP ALA LYS SEQRES 6 A 257 ARG VAL PRO GLY PHE VAL ASP LEU THR LEU HIS ASP GLN SEQRES 7 A 257 VAL HIS LEU LEU GLU CYS ALA TRP LEU GLU ILE LEU MET SEQRES 8 A 257 ILE GLY LEU VAL TRP ARG SER MET GLU HIS PRO GLY LYS SEQRES 9 A 257 LEU LEU PHE ALA PRO ASN LEU LEU LEU ASP ARG ASN GLN SEQRES 10 A 257 GLY LYS CYS VAL GLU GLY MET VAL GLU ILE PHE ASP MET SEQRES 11 A 257 LEU LEU ALA THR SER SER ARG PHE ARG MET MET ASN LEU SEQRES 12 A 257 GLN GLY GLU GLU PHE VAL CYS LEU LYS SER ILE ILE LEU SEQRES 13 A 257 LEU ASN SER GLY VAL TYR THR PHE LEU SER SER THR LEU SEQRES 14 A 257 LYS SER LEU GLU GLU LYS ASP HIS ILE HIS ARG VAL LEU SEQRES 15 A 257 ASP LYS ILE THR ASP THR LEU ILE HIS LEU MET ALA LYS SEQRES 16 A 257 ALA GLY LEU THR LEU GLN GLN GLN HIS GLN ARG LEU ALA SEQRES 17 A 257 GLN LEU LEU LEU ILE LEU SER HIS ILE ARG HIS MET SER SEQRES 18 A 257 ASN LYS GLY MET GLU HIS LEU TYR SER MET LYS CYS LYS SEQRES 19 A 257 ASN VAL VAL PRO LEU SER ASP LEU LEU LEU GLU MET LEU SEQRES 20 A 257 ASP ALA HIS ARG LEU HIS ALA PRO THR SER SEQRES 1 B 257 ILE LYS ARG SER LYS LYS ASN SER LEU ALA LEU SER LEU SEQRES 2 B 257 THR ALA ASP GLN MET VAL SER ALA LEU LEU ASP ALA GLU SEQRES 3 B 257 PRO PRO ILE LEU TYR SER GLU TYR ASP PRO THR ARG PRO SEQRES 4 B 257 PHE SER GLU ALA SER MET MET GLY LEU LEU THR ASN LEU SEQRES 5 B 257 ALA ASP ARG GLU LEU VAL HIS MET ILE ASN TRP ALA LYS SEQRES 6 B 257 ARG VAL PRO GLY PHE VAL ASP LEU THR LEU HIS ASP GLN SEQRES 7 B 257 VAL HIS LEU LEU GLU CYS ALA TRP LEU GLU ILE LEU MET SEQRES 8 B 257 ILE GLY LEU VAL TRP ARG SER MET GLU HIS PRO GLY LYS SEQRES 9 B 257 LEU LEU PHE ALA PRO ASN LEU LEU LEU ASP ARG ASN GLN SEQRES 10 B 257 GLY LYS CYS VAL GLU GLY MET VAL GLU ILE PHE ASP MET SEQRES 11 B 257 LEU LEU ALA THR SER SER ARG PHE ARG MET MET ASN LEU SEQRES 12 B 257 GLN GLY GLU GLU PHE VAL CYS LEU LYS SER ILE ILE LEU SEQRES 13 B 257 LEU ASN SER GLY VAL TYR THR PHE LEU SER SER THR LEU SEQRES 14 B 257 LYS SER LEU GLU GLU LYS ASP HIS ILE HIS ARG VAL LEU SEQRES 15 B 257 ASP LYS ILE THR ASP THR LEU ILE HIS LEU MET ALA LYS SEQRES 16 B 257 ALA GLY LEU THR LEU GLN GLN GLN HIS GLN ARG LEU ALA SEQRES 17 B 257 GLN LEU LEU LEU ILE LEU SER HIS ILE ARG HIS MET SER SEQRES 18 B 257 ASN LYS GLY MET GLU HIS LEU TYR SER MET LYS CYS LYS SEQRES 19 B 257 ASN VAL VAL PRO LEU SER ASP LEU LEU LEU GLU MET LEU SEQRES 20 B 257 ASP ALA HIS ARG LEU HIS ALA PRO THR SER SEQRES 1 C 14 LYS HIS LYS ILE LEU HIS ARG LEU LEU GLN ASP SER SER SEQRES 2 C 14 SER SEQRES 1 D 14 LYS HIS LYS ILE LEU HIS ARG LEU LEU GLN ASP SER SER SEQRES 2 D 14 SER HET 5KF A 901 24 HET 5KF B 900 24 HETNAM 5KF 4,4'-{[(3S)-3-(2-HYDROXYETHYL) HETNAM 2 5KF CYCLOHEXYLIDENE]METHANEDIYL}DIPHENOL FORMUL 5 5KF 2(C21 H24 O3) FORMUL 7 HOH *283(H2 O) HELIX 1 AA1 SER A 305 LEU A 310 5 6 HELIX 2 AA2 THR A 311 ALA A 322 1 12 HELIX 3 AA3 SER A 338 LYS A 362 1 25 HELIX 4 AA4 GLY A 366 LEU A 370 5 5 HELIX 5 AA5 THR A 371 MET A 396 1 26 HELIX 6 AA6 ARG A 412 LYS A 416 1 5 HELIX 7 AA7 MET A 421 MET A 438 1 18 HELIX 8 AA8 GLN A 441 SER A 456 1 16 HELIX 9 AA9 GLY A 457 PHE A 461 5 5 HELIX 10 AB1 ASP A 473 ALA A 493 1 21 HELIX 11 AB2 THR A 496 LYS A 531 1 36 HELIX 12 AB3 SER A 537 ALA A 546 1 10 HELIX 13 AB4 HIS A 547 ARG A 548 5 2 HELIX 14 AB5 LEU B 306 LEU B 310 5 5 HELIX 15 AB6 THR B 311 ALA B 322 1 12 HELIX 16 AB7 SER B 338 LYS B 362 1 25 HELIX 17 AB8 GLY B 366 LEU B 370 5 5 HELIX 18 AB9 THR B 371 MET B 396 1 26 HELIX 19 AC1 ARG B 412 LYS B 416 1 5 HELIX 20 AC2 MET B 421 ASN B 439 1 19 HELIX 21 AC3 GLN B 441 SER B 456 1 16 HELIX 22 AC4 LEU B 469 ALA B 493 1 25 HELIX 23 AC5 THR B 496 LYS B 531 1 36 HELIX 24 AC6 SER B 537 ALA B 546 1 10 HELIX 25 AC7 LYS C 688 ASP C 696 1 9 HELIX 26 AC8 LYS D 688 ASP D 696 1 9 SHEET 1 AA1 2 LYS A 401 ALA A 405 0 SHEET 2 AA1 2 LEU A 408 ASP A 411 -1 O LEU A 410 N LEU A 402 SHEET 1 AA2 2 LYS B 401 ALA B 405 0 SHEET 2 AA2 2 LEU B 408 ASP B 411 -1 O LEU B 410 N LEU B 402 CISPEP 1 ARG A 335 PRO A 336 0 11.26 SITE 1 AC1 11 MET A 343 THR A 347 ALA A 350 GLU A 353 SITE 2 AC1 11 LEU A 387 ARG A 394 HIS A 524 LEU A 525 SITE 3 AC1 11 LEU A 536 LEU A 540 HOH A1014 SITE 1 AC2 11 MET B 343 LEU B 346 THR B 347 ALA B 350 SITE 2 AC2 11 GLU B 353 LEU B 387 ARG B 394 GLY B 521 SITE 3 AC2 11 HIS B 524 LEU B 525 LEU B 540 CRYST1 56.390 82.349 58.610 90.00 111.17 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017734 0.000000 0.006868 0.00000 SCALE2 0.000000 0.012143 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018297 0.00000