data_5E0J # _entry.id 5E0J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5E0J pdb_00005e0j 10.2210/pdb5e0j/pdb WWPDB D_1000214148 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 5E0G unspecified PDB . 5E0H unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5E0J _pdbx_database_status.recvd_initial_deposition_date 2015-09-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lovell, S.' 1 'Battaile, K.P.' 2 'Mehzabeen, N.' 3 'Weerawarna, P.M.' 4 'Kim, Y.' 5 'Kankanamalage, A.C.G.' 6 'Damalanka, V.C.' 7 'Lushington, G.H.' 8 'Alliston, K.R.' 9 'Chang, K.-O.' 10 'Groutas, W.C.' 11 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country FR _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Eur.J.Med.Chem. _citation.journal_id_ASTM EJMCA5 _citation.journal_id_CSD 0493 _citation.journal_id_ISSN 0223-5234 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 119 _citation.language ? _citation.page_first 300 _citation.page_last 318 _citation.title ;Structure-based design and synthesis of triazole-based macrocyclic inhibitors of norovirus protease: Structural, biochemical, spectroscopic, and antiviral studies. ; _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.ejmech.2016.04.013 _citation.pdbx_database_id_PubMed 27235842 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Weerawarna, P.M.' 1 ? primary 'Kim, Y.' 2 ? primary 'Galasiti Kankanamalage, A.C.' 3 ? primary 'Damalanka, V.C.' 4 ? primary 'Lushington, G.H.' 5 ? primary 'Alliston, K.R.' 6 ? primary 'Mehzabeen, N.' 7 ? primary 'Battaile, K.P.' 8 ? primary 'Lovell, S.' 9 ? primary 'Chang, K.O.' 10 ? primary 'Groutas, W.C.' 11 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 110.040 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5E0J _cell.details ? _cell.formula_units_Z ? _cell.length_a 66.666 _cell.length_a_esd ? _cell.length_b 37.159 _cell.length_b_esd ? _cell.length_c 61.859 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5E0J _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Norovirus 3C-like protease' 20126.131 1 3.4.22.66 ? 'UNP residues 1101-1281' ? 2 non-polymer syn 'CHLORIDE ION' 35.453 3 ? ? ? ? 3 non-polymer syn ;(phenylmethyl) ~{N}-[(12~{S},15~{S},18~{S})-15-(cyclohexylmethyl)-12-(hydroxymethyl)-9,14,17-tris(oxidanylidene)-1,8,13,16,21,22-hexazabicyclo[18.2.1]tricosa-20(23),21-dien-18-yl]carbamate ; 639.785 1 ? ? ? ? 4 water nat water 18.015 170 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHAPPTLWSRVTKFGSGWGFWVSPTVFITTTHVVPTGVKEFFGEPLSSIAIHQAGEFTQFRFSKKMRPDLTGMVL EEGCPEGTVCSVLIKRDSGELLPLAVRMGAIASMRIQGRLVHGQSGMLLTGANAKGMDLGTIPGDCGAPYVHKRGNDWVV CGVHAAATKSGNTVVCAVQAGEGETALE ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHAPPTLWSRVTKFGSGWGFWVSPTVFITTTHVVPTGVKEFFGEPLSSIAIHQAGEFTQFRFSKKMRPDLTGMVL EEGCPEGTVCSVLIKRDSGELLPLAVRMGAIASMRIQGRLVHGQSGMLLTGANAKGMDLGTIPGDCGAPYVHKRGNDWVV CGVHAAATKSGNTVVCAVQAGEGETALE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 ALA n 1 9 PRO n 1 10 PRO n 1 11 THR n 1 12 LEU n 1 13 TRP n 1 14 SER n 1 15 ARG n 1 16 VAL n 1 17 THR n 1 18 LYS n 1 19 PHE n 1 20 GLY n 1 21 SER n 1 22 GLY n 1 23 TRP n 1 24 GLY n 1 25 PHE n 1 26 TRP n 1 27 VAL n 1 28 SER n 1 29 PRO n 1 30 THR n 1 31 VAL n 1 32 PHE n 1 33 ILE n 1 34 THR n 1 35 THR n 1 36 THR n 1 37 HIS n 1 38 VAL n 1 39 VAL n 1 40 PRO n 1 41 THR n 1 42 GLY n 1 43 VAL n 1 44 LYS n 1 45 GLU n 1 46 PHE n 1 47 PHE n 1 48 GLY n 1 49 GLU n 1 50 PRO n 1 51 LEU n 1 52 SER n 1 53 SER n 1 54 ILE n 1 55 ALA n 1 56 ILE n 1 57 HIS n 1 58 GLN n 1 59 ALA n 1 60 GLY n 1 61 GLU n 1 62 PHE n 1 63 THR n 1 64 GLN n 1 65 PHE n 1 66 ARG n 1 67 PHE n 1 68 SER n 1 69 LYS n 1 70 LYS n 1 71 MET n 1 72 ARG n 1 73 PRO n 1 74 ASP n 1 75 LEU n 1 76 THR n 1 77 GLY n 1 78 MET n 1 79 VAL n 1 80 LEU n 1 81 GLU n 1 82 GLU n 1 83 GLY n 1 84 CYS n 1 85 PRO n 1 86 GLU n 1 87 GLY n 1 88 THR n 1 89 VAL n 1 90 CYS n 1 91 SER n 1 92 VAL n 1 93 LEU n 1 94 ILE n 1 95 LYS n 1 96 ARG n 1 97 ASP n 1 98 SER n 1 99 GLY n 1 100 GLU n 1 101 LEU n 1 102 LEU n 1 103 PRO n 1 104 LEU n 1 105 ALA n 1 106 VAL n 1 107 ARG n 1 108 MET n 1 109 GLY n 1 110 ALA n 1 111 ILE n 1 112 ALA n 1 113 SER n 1 114 MET n 1 115 ARG n 1 116 ILE n 1 117 GLN n 1 118 GLY n 1 119 ARG n 1 120 LEU n 1 121 VAL n 1 122 HIS n 1 123 GLY n 1 124 GLN n 1 125 SER n 1 126 GLY n 1 127 MET n 1 128 LEU n 1 129 LEU n 1 130 THR n 1 131 GLY n 1 132 ALA n 1 133 ASN n 1 134 ALA n 1 135 LYS n 1 136 GLY n 1 137 MET n 1 138 ASP n 1 139 LEU n 1 140 GLY n 1 141 THR n 1 142 ILE n 1 143 PRO n 1 144 GLY n 1 145 ASP n 1 146 CYS n 1 147 GLY n 1 148 ALA n 1 149 PRO n 1 150 TYR n 1 151 VAL n 1 152 HIS n 1 153 LYS n 1 154 ARG n 1 155 GLY n 1 156 ASN n 1 157 ASP n 1 158 TRP n 1 159 VAL n 1 160 VAL n 1 161 CYS n 1 162 GLY n 1 163 VAL n 1 164 HIS n 1 165 ALA n 1 166 ALA n 1 167 ALA n 1 168 THR n 1 169 LYS n 1 170 SER n 1 171 GLY n 1 172 ASN n 1 173 THR n 1 174 VAL n 1 175 VAL n 1 176 CYS n 1 177 ALA n 1 178 VAL n 1 179 GLN n 1 180 ALA n 1 181 GLY n 1 182 GLU n 1 183 GLY n 1 184 GLU n 1 185 THR n 1 186 ALA n 1 187 LEU n 1 188 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 188 _entity_src_gen.gene_src_common_name Hu/NV/NV/1968/US _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ORF1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'GI/Human/United States/Norwalk/1968' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Norwalk virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 524364 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POLG_NVN68 _struct_ref.pdbx_db_accession Q83883 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;APPTLWSRVTKFGSGWGFWVSPTVFITTTHVVPTGVKEFFGEPLSSIAIHQAGEFTQFRFSKKMRPDLTGMVLEEGCPEG TVCSVLIKRDSGELLPLAVRMGAIASMRIQGRLVHGQSGMLLTGANAKGMDLGTIPGDCGAPYVHKRGNDWVVCGVHAAA TKSGNTVVCAVQAGEGETALE ; _struct_ref.pdbx_align_begin 1101 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5E0J _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 188 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q83883 _struct_ref_seq.db_align_beg 1101 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1281 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 181 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5E0J MET A 1 ? UNP Q83883 ? ? 'expression tag' -6 1 1 5E0J HIS A 2 ? UNP Q83883 ? ? 'expression tag' -5 2 1 5E0J HIS A 3 ? UNP Q83883 ? ? 'expression tag' -4 3 1 5E0J HIS A 4 ? UNP Q83883 ? ? 'expression tag' -3 4 1 5E0J HIS A 5 ? UNP Q83883 ? ? 'expression tag' -2 5 1 5E0J HIS A 6 ? UNP Q83883 ? ? 'expression tag' -1 6 1 5E0J HIS A 7 ? UNP Q83883 ? ? 'expression tag' 0 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5LJ peptide-like . ;(phenylmethyl) ~{N}-[(12~{S},15~{S},18~{S})-15-(cyclohexylmethyl)-12-(hydroxymethyl)-9,14,17-tris(oxidanylidene)-1,8,13,16,21,22-hexazabicyclo[18.2.1]tricosa-20(23),21-dien-18-yl]carbamate ; ? 'C33 H49 N7 O6' 639.785 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5E0J _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.79 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 31.22 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '30% w/v PEG 2000 MME, 150 mM potassium bromide' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-11-18 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 12.940 _reflns.entry_id 5E0J _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.200 _reflns.d_resolution_low 32.630 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 42941 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.500 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.700 _reflns.pdbx_Rmerge_I_obs 0.058 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.300 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects 146 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.025 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 246169 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.200 1.220 ? 1.900 7177 ? ? 2016 ? 93.700 ? ? ? ? 0.787 ? ? ? ? ? ? ? ? 3.600 ? ? ? ? ? 0.476 0 1 1 0.688 ? 6.570 32.630 ? 48.800 1857 ? ? 297 ? 98.900 ? ? ? ? 0.043 ? ? ? ? ? ? ? ? 6.300 ? ? ? ? ? 0.019 0 2 1 0.995 ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 53.450 _refine.B_iso_mean 19.1086 _refine.B_iso_min 7.600 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5E0J _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.2000 _refine.ls_d_res_low 31.9570 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 42926 _refine.ls_number_reflns_R_free 2020 _refine.ls_number_reflns_R_work 40906 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.1000 _refine.ls_percent_reflns_R_free 4.7100 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1379 _refine.ls_R_factor_R_free 0.1654 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1365 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.010 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 3UR9' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 16.1700 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.2000 _refine_hist.d_res_low 31.9570 _refine_hist.pdbx_number_atoms_ligand 49 _refine_hist.number_atoms_solvent 170 _refine_hist.number_atoms_total 1492 _refine_hist.pdbx_number_residues_total 174 _refine_hist.pdbx_B_iso_mean_ligand 23.11 _refine_hist.pdbx_B_iso_mean_solvent 30.50 _refine_hist.pdbx_number_atoms_protein 1273 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 ? 1382 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.087 ? 1883 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.081 ? 214 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 ? 238 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 12.768 ? 489 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.2000 1.2300 2961 . 129 2832 93.0000 . . . 0.2354 . 0.2136 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.2300 1.2633 2953 . 134 2819 94.0000 . . . 0.2245 . 0.1958 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.2633 1.3005 2950 . 136 2814 94.0000 . . . 0.2102 . 0.1762 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.3005 1.3424 2986 . 157 2829 94.0000 . . . 0.1862 . 0.1609 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.3424 1.3904 3020 . 133 2887 95.0000 . . . 0.1997 . 0.1465 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.3904 1.4461 3045 . 141 2904 96.0000 . . . 0.1884 . 0.1342 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.4461 1.5119 3048 . 149 2899 96.0000 . . . 0.1536 . 0.1161 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.5119 1.5916 3102 . 142 2960 97.0000 . . . 0.1393 . 0.1115 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.5916 1.6913 3053 . 146 2907 97.0000 . . . 0.1607 . 0.1146 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.6913 1.8219 3120 . 141 2979 97.0000 . . . 0.1433 . 0.1284 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.8219 2.0052 3138 . 149 2989 98.0000 . . . 0.1588 . 0.1258 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.0052 2.2953 3127 . 142 2985 98.0000 . . . 0.1607 . 0.1298 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.2953 2.8915 3156 . 158 2998 98.0000 . . . 0.1630 . 0.1456 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.8915 31.9688 3267 . 163 3104 99.0000 . . . 0.1638 . 0.1355 . . . . . . 14 . . . # _struct.entry_id 5E0J _struct.title '1.20 A resolution structure of Norovirus 3CL protease in complex with a triazole-based macrocyclic (21-mer) inhibitor' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5E0J _struct_keywords.text ;protease, norovirus, norwalk virus, antiviral inhibitors, triazole macrocyclic inhibitor, cell permeable, PROTEASE-PROTEASE INHIBITOR complex ; _struct_keywords.pdbx_keywords 'PROTEASE/PROTEASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 9 ? SER A 14 ? PRO A 2 SER A 7 1 ? 6 HELX_P HELX_P2 AA2 HIS A 37 ? VAL A 39 ? HIS A 30 VAL A 32 5 ? 3 HELX_P HELX_P3 AA3 THR A 130 ? ASN A 133 ? THR A 123 ASN A 126 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag none _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 146 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id E _struct_conn.ptnr2_label_comp_id 5LJ _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C02 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 139 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 5LJ _struct_conn.ptnr2_auth_seq_id 204 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.816 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 2 ? AA3 ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA3 6 7 ? anti-parallel AA3 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 16 ? PHE A 19 ? VAL A 9 PHE A 12 AA1 2 GLY A 22 ? TRP A 26 ? GLY A 15 TRP A 19 AA1 3 VAL A 31 ? THR A 35 ? VAL A 24 THR A 28 AA1 4 PHE A 62 ? PHE A 67 ? PHE A 55 PHE A 60 AA1 5 ILE A 54 ? ALA A 59 ? ILE A 47 ALA A 52 AA2 1 GLU A 45 ? PHE A 46 ? GLU A 38 PHE A 39 AA2 2 GLU A 49 ? PRO A 50 ? GLU A 42 PRO A 43 AA3 1 VAL A 79 ? LEU A 80 ? VAL A 72 LEU A 73 AA3 2 ASP A 157 ? THR A 168 ? ASP A 150 THR A 161 AA3 3 THR A 173 ? ALA A 177 ? THR A 166 ALA A 170 AA3 4 ARG A 119 ? LEU A 128 ? ARG A 112 LEU A 121 AA3 5 LEU A 101 ? ILE A 116 ? LEU A 94 ILE A 109 AA3 6 VAL A 89 ? LYS A 95 ? VAL A 82 LYS A 88 AA3 7 PRO A 149 ? ARG A 154 ? PRO A 142 ARG A 147 AA3 8 ASP A 157 ? THR A 168 ? ASP A 150 THR A 161 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE A 19 ? N PHE A 12 O GLY A 22 ? O GLY A 15 AA1 2 3 N PHE A 25 ? N PHE A 18 O ILE A 33 ? O ILE A 26 AA1 3 4 N PHE A 32 ? N PHE A 25 O PHE A 65 ? O PHE A 58 AA1 4 5 O ARG A 66 ? O ARG A 59 N ALA A 55 ? N ALA A 48 AA2 1 2 N PHE A 46 ? N PHE A 39 O GLU A 49 ? O GLU A 42 AA3 1 2 N VAL A 79 ? N VAL A 72 O VAL A 160 ? O VAL A 153 AA3 2 3 N VAL A 163 ? N VAL A 156 O ALA A 177 ? O ALA A 170 AA3 3 4 O CYS A 176 ? O CYS A 169 N GLN A 124 ? N GLN A 117 AA3 4 5 O SER A 125 ? O SER A 118 N GLY A 109 ? N GLY A 102 AA3 5 6 O LEU A 102 ? O LEU A 95 N ILE A 94 ? N ILE A 87 AA3 6 7 N SER A 91 ? N SER A 84 O VAL A 151 ? O VAL A 144 AA3 7 8 N ARG A 154 ? N ARG A 147 O ASP A 157 ? O ASP A 150 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 201 ? 4 'binding site for residue CL A 201' AC2 Software A CL 202 ? 3 'binding site for residue CL A 202' AC3 Software A CL 203 ? 3 'binding site for residue CL A 203' AC4 Software A 5LJ 204 ? 19 'binding site for residue 5LJ A 204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 THR A 11 ? THR A 4 . ? 1_555 ? 2 AC1 4 LEU A 12 ? LEU A 5 . ? 1_555 ? 3 AC1 4 ARG A 15 ? ARG A 8 . ? 1_555 ? 4 AC1 4 HOH F . ? HOH A 455 . ? 1_555 ? 5 AC2 3 GLN A 58 ? GLN A 51 . ? 1_555 ? 6 AC2 3 HOH F . ? HOH A 376 . ? 1_555 ? 7 AC2 3 HOH F . ? HOH A 461 . ? 1_555 ? 8 AC3 3 GLY A 20 ? GLY A 13 . ? 1_555 ? 9 AC3 3 HOH F . ? HOH A 377 . ? 1_555 ? 10 AC3 3 HOH F . ? HOH A 430 . ? 1_555 ? 11 AC4 19 HIS A 37 ? HIS A 30 . ? 1_555 ? 12 AC4 19 GLU A 61 ? GLU A 54 . ? 1_555 ? 13 AC4 19 MET A 114 ? MET A 107 . ? 1_555 ? 14 AC4 19 ILE A 116 ? ILE A 109 . ? 1_555 ? 15 AC4 19 GLN A 117 ? GLN A 110 . ? 1_555 ? 16 AC4 19 SER A 125 ? SER A 118 . ? 1_555 ? 17 AC4 19 LEU A 139 ? LEU A 132 . ? 1_555 ? 18 AC4 19 GLY A 144 ? GLY A 137 . ? 1_555 ? 19 AC4 19 CYS A 146 ? CYS A 139 . ? 1_555 ? 20 AC4 19 GLY A 155 ? GLY A 148 . ? 1_545 ? 21 AC4 19 HIS A 164 ? HIS A 157 . ? 1_555 ? 22 AC4 19 ALA A 165 ? ALA A 158 . ? 1_555 ? 23 AC4 19 ALA A 166 ? ALA A 159 . ? 1_555 ? 24 AC4 19 ALA A 167 ? ALA A 160 . ? 1_555 ? 25 AC4 19 VAL A 175 ? VAL A 168 . ? 1_555 ? 26 AC4 19 HOH F . ? HOH A 302 . ? 1_555 ? 27 AC4 19 HOH F . ? HOH A 312 . ? 1_555 ? 28 AC4 19 HOH F . ? HOH A 395 . ? 1_555 ? 29 AC4 19 HOH F . ? HOH A 406 . ? 1_555 ? # _atom_sites.entry_id 5E0J _atom_sites.fract_transf_matrix[1][1] 0.015000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005471 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026911 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017208 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -6 ? ? ? A . n A 1 2 HIS 2 -5 ? ? ? A . n A 1 3 HIS 3 -4 ? ? ? A . n A 1 4 HIS 4 -3 ? ? ? A . n A 1 5 HIS 5 -2 ? ? ? A . n A 1 6 HIS 6 -1 ? ? ? A . n A 1 7 HIS 7 0 0 HIS HIS A . n A 1 8 ALA 8 1 1 ALA ALA A . n A 1 9 PRO 9 2 2 PRO PRO A . n A 1 10 PRO 10 3 3 PRO PRO A . n A 1 11 THR 11 4 4 THR THR A . n A 1 12 LEU 12 5 5 LEU LEU A . n A 1 13 TRP 13 6 6 TRP TRP A . n A 1 14 SER 14 7 7 SER SER A . n A 1 15 ARG 15 8 8 ARG ARG A . n A 1 16 VAL 16 9 9 VAL VAL A . n A 1 17 THR 17 10 10 THR THR A . n A 1 18 LYS 18 11 11 LYS LYS A . n A 1 19 PHE 19 12 12 PHE PHE A . n A 1 20 GLY 20 13 13 GLY GLY A . n A 1 21 SER 21 14 14 SER SER A . n A 1 22 GLY 22 15 15 GLY GLY A . n A 1 23 TRP 23 16 16 TRP TRP A . n A 1 24 GLY 24 17 17 GLY GLY A . n A 1 25 PHE 25 18 18 PHE PHE A . n A 1 26 TRP 26 19 19 TRP TRP A . n A 1 27 VAL 27 20 20 VAL VAL A . n A 1 28 SER 28 21 21 SER SER A . n A 1 29 PRO 29 22 22 PRO PRO A . n A 1 30 THR 30 23 23 THR THR A . n A 1 31 VAL 31 24 24 VAL VAL A . n A 1 32 PHE 32 25 25 PHE PHE A . n A 1 33 ILE 33 26 26 ILE ILE A . n A 1 34 THR 34 27 27 THR THR A . n A 1 35 THR 35 28 28 THR THR A . n A 1 36 THR 36 29 29 THR THR A . n A 1 37 HIS 37 30 30 HIS HIS A . n A 1 38 VAL 38 31 31 VAL VAL A . n A 1 39 VAL 39 32 32 VAL VAL A . n A 1 40 PRO 40 33 33 PRO PRO A . n A 1 41 THR 41 34 34 THR THR A . n A 1 42 GLY 42 35 35 GLY GLY A . n A 1 43 VAL 43 36 36 VAL VAL A . n A 1 44 LYS 44 37 37 LYS LYS A . n A 1 45 GLU 45 38 38 GLU GLU A . n A 1 46 PHE 46 39 39 PHE PHE A . n A 1 47 PHE 47 40 40 PHE PHE A . n A 1 48 GLY 48 41 41 GLY GLY A . n A 1 49 GLU 49 42 42 GLU GLU A . n A 1 50 PRO 50 43 43 PRO PRO A . n A 1 51 LEU 51 44 44 LEU LEU A . n A 1 52 SER 52 45 45 SER SER A . n A 1 53 SER 53 46 46 SER SER A . n A 1 54 ILE 54 47 47 ILE ILE A . n A 1 55 ALA 55 48 48 ALA ALA A . n A 1 56 ILE 56 49 49 ILE ILE A . n A 1 57 HIS 57 50 50 HIS HIS A . n A 1 58 GLN 58 51 51 GLN GLN A . n A 1 59 ALA 59 52 52 ALA ALA A . n A 1 60 GLY 60 53 53 GLY GLY A . n A 1 61 GLU 61 54 54 GLU GLU A . n A 1 62 PHE 62 55 55 PHE PHE A . n A 1 63 THR 63 56 56 THR THR A . n A 1 64 GLN 64 57 57 GLN GLN A . n A 1 65 PHE 65 58 58 PHE PHE A . n A 1 66 ARG 66 59 59 ARG ARG A . n A 1 67 PHE 67 60 60 PHE PHE A . n A 1 68 SER 68 61 61 SER SER A . n A 1 69 LYS 69 62 62 LYS LYS A . n A 1 70 LYS 70 63 63 LYS LYS A . n A 1 71 MET 71 64 64 MET MET A . n A 1 72 ARG 72 65 65 ARG ARG A . n A 1 73 PRO 73 66 66 PRO PRO A . n A 1 74 ASP 74 67 67 ASP ASP A . n A 1 75 LEU 75 68 68 LEU LEU A . n A 1 76 THR 76 69 69 THR THR A . n A 1 77 GLY 77 70 70 GLY GLY A . n A 1 78 MET 78 71 71 MET MET A . n A 1 79 VAL 79 72 72 VAL VAL A . n A 1 80 LEU 80 73 73 LEU LEU A . n A 1 81 GLU 81 74 74 GLU GLU A . n A 1 82 GLU 82 75 75 GLU GLU A . n A 1 83 GLY 83 76 76 GLY GLY A . n A 1 84 CYS 84 77 77 CYS CYS A . n A 1 85 PRO 85 78 78 PRO PRO A . n A 1 86 GLU 86 79 79 GLU GLU A . n A 1 87 GLY 87 80 80 GLY GLY A . n A 1 88 THR 88 81 81 THR THR A . n A 1 89 VAL 89 82 82 VAL VAL A . n A 1 90 CYS 90 83 83 CYS CYS A . n A 1 91 SER 91 84 84 SER SER A . n A 1 92 VAL 92 85 85 VAL VAL A . n A 1 93 LEU 93 86 86 LEU LEU A . n A 1 94 ILE 94 87 87 ILE ILE A . n A 1 95 LYS 95 88 88 LYS LYS A . n A 1 96 ARG 96 89 89 ARG ARG A . n A 1 97 ASP 97 90 90 ASP ASP A . n A 1 98 SER 98 91 91 SER SER A . n A 1 99 GLY 99 92 92 GLY GLY A . n A 1 100 GLU 100 93 93 GLU GLU A . n A 1 101 LEU 101 94 94 LEU LEU A . n A 1 102 LEU 102 95 95 LEU LEU A . n A 1 103 PRO 103 96 96 PRO PRO A . n A 1 104 LEU 104 97 97 LEU LEU A . n A 1 105 ALA 105 98 98 ALA ALA A . n A 1 106 VAL 106 99 99 VAL VAL A . n A 1 107 ARG 107 100 100 ARG ARG A . n A 1 108 MET 108 101 101 MET MET A . n A 1 109 GLY 109 102 102 GLY GLY A . n A 1 110 ALA 110 103 103 ALA ALA A . n A 1 111 ILE 111 104 104 ILE ILE A . n A 1 112 ALA 112 105 105 ALA ALA A . n A 1 113 SER 113 106 106 SER SER A . n A 1 114 MET 114 107 107 MET MET A . n A 1 115 ARG 115 108 108 ARG ARG A . n A 1 116 ILE 116 109 109 ILE ILE A . n A 1 117 GLN 117 110 110 GLN GLN A . n A 1 118 GLY 118 111 111 GLY GLY A . n A 1 119 ARG 119 112 112 ARG ARG A . n A 1 120 LEU 120 113 113 LEU LEU A . n A 1 121 VAL 121 114 114 VAL VAL A . n A 1 122 HIS 122 115 115 HIS HIS A . n A 1 123 GLY 123 116 116 GLY GLY A . n A 1 124 GLN 124 117 117 GLN GLN A . n A 1 125 SER 125 118 118 SER SER A . n A 1 126 GLY 126 119 119 GLY GLY A . n A 1 127 MET 127 120 120 MET MET A . n A 1 128 LEU 128 121 121 LEU LEU A . n A 1 129 LEU 129 122 122 LEU LEU A . n A 1 130 THR 130 123 123 THR THR A . n A 1 131 GLY 131 124 124 GLY GLY A . n A 1 132 ALA 132 125 125 ALA ALA A . n A 1 133 ASN 133 126 126 ASN ASN A . n A 1 134 ALA 134 127 127 ALA ALA A . n A 1 135 LYS 135 128 128 LYS LYS A . n A 1 136 GLY 136 129 129 GLY GLY A . n A 1 137 MET 137 130 130 MET MET A . n A 1 138 ASP 138 131 131 ASP ASP A . n A 1 139 LEU 139 132 132 LEU LEU A . n A 1 140 GLY 140 133 133 GLY GLY A . n A 1 141 THR 141 134 134 THR THR A . n A 1 142 ILE 142 135 135 ILE ILE A . n A 1 143 PRO 143 136 136 PRO PRO A . n A 1 144 GLY 144 137 137 GLY GLY A . n A 1 145 ASP 145 138 138 ASP ASP A . n A 1 146 CYS 146 139 139 CYS CYS A . n A 1 147 GLY 147 140 140 GLY GLY A . n A 1 148 ALA 148 141 141 ALA ALA A . n A 1 149 PRO 149 142 142 PRO PRO A . n A 1 150 TYR 150 143 143 TYR TYR A . n A 1 151 VAL 151 144 144 VAL VAL A . n A 1 152 HIS 152 145 145 HIS HIS A . n A 1 153 LYS 153 146 146 LYS LYS A . n A 1 154 ARG 154 147 147 ARG ARG A . n A 1 155 GLY 155 148 148 GLY GLY A . n A 1 156 ASN 156 149 149 ASN ASN A . n A 1 157 ASP 157 150 150 ASP ASP A . n A 1 158 TRP 158 151 151 TRP TRP A . n A 1 159 VAL 159 152 152 VAL VAL A . n A 1 160 VAL 160 153 153 VAL VAL A . n A 1 161 CYS 161 154 154 CYS CYS A . n A 1 162 GLY 162 155 155 GLY GLY A . n A 1 163 VAL 163 156 156 VAL VAL A . n A 1 164 HIS 164 157 157 HIS HIS A . n A 1 165 ALA 165 158 158 ALA ALA A . n A 1 166 ALA 166 159 159 ALA ALA A . n A 1 167 ALA 167 160 160 ALA ALA A . n A 1 168 THR 168 161 161 THR THR A . n A 1 169 LYS 169 162 162 LYS LYS A . n A 1 170 SER 170 163 163 SER SER A . n A 1 171 GLY 171 164 164 GLY GLY A . n A 1 172 ASN 172 165 165 ASN ASN A . n A 1 173 THR 173 166 166 THR THR A . n A 1 174 VAL 174 167 167 VAL VAL A . n A 1 175 VAL 175 168 168 VAL VAL A . n A 1 176 CYS 176 169 169 CYS CYS A . n A 1 177 ALA 177 170 170 ALA ALA A . n A 1 178 VAL 178 171 171 VAL VAL A . n A 1 179 GLN 179 172 172 GLN GLN A . n A 1 180 ALA 180 173 173 ALA ALA A . n A 1 181 GLY 181 174 ? ? ? A . n A 1 182 GLU 182 175 ? ? ? A . n A 1 183 GLY 183 176 ? ? ? A . n A 1 184 GLU 184 177 ? ? ? A . n A 1 185 THR 185 178 ? ? ? A . n A 1 186 ALA 186 179 ? ? ? A . n A 1 187 LEU 187 180 ? ? ? A . n A 1 188 GLU 188 181 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 201 1 CL CL A . C 2 CL 1 202 2 CL CL A . D 2 CL 1 203 3 CL CL A . E 3 5LJ 1 204 1 5LJ P07 A . F 4 HOH 1 301 118 HOH HOH A . F 4 HOH 2 302 126 HOH HOH A . F 4 HOH 3 303 108 HOH HOH A . F 4 HOH 4 304 105 HOH HOH A . F 4 HOH 5 305 146 HOH HOH A . F 4 HOH 6 306 88 HOH HOH A . F 4 HOH 7 307 138 HOH HOH A . F 4 HOH 8 308 164 HOH HOH A . F 4 HOH 9 309 91 HOH HOH A . F 4 HOH 10 310 117 HOH HOH A . F 4 HOH 11 311 14 HOH HOH A . F 4 HOH 12 312 107 HOH HOH A . F 4 HOH 13 313 25 HOH HOH A . F 4 HOH 14 314 30 HOH HOH A . F 4 HOH 15 315 143 HOH HOH A . F 4 HOH 16 316 103 HOH HOH A . F 4 HOH 17 317 43 HOH HOH A . F 4 HOH 18 318 32 HOH HOH A . F 4 HOH 19 319 3 HOH HOH A . F 4 HOH 20 320 99 HOH HOH A . F 4 HOH 21 321 19 HOH HOH A . F 4 HOH 22 322 154 HOH HOH A . F 4 HOH 23 323 89 HOH HOH A . F 4 HOH 24 324 70 HOH HOH A . F 4 HOH 25 325 94 HOH HOH A . F 4 HOH 26 326 5 HOH HOH A . F 4 HOH 27 327 169 HOH HOH A . F 4 HOH 28 328 79 HOH HOH A . F 4 HOH 29 329 80 HOH HOH A . F 4 HOH 30 330 90 HOH HOH A . F 4 HOH 31 331 58 HOH HOH A . F 4 HOH 32 332 67 HOH HOH A . F 4 HOH 33 333 159 HOH HOH A . F 4 HOH 34 334 26 HOH HOH A . F 4 HOH 35 335 65 HOH HOH A . F 4 HOH 36 336 116 HOH HOH A . F 4 HOH 37 337 95 HOH HOH A . F 4 HOH 38 338 76 HOH HOH A . F 4 HOH 39 339 4 HOH HOH A . F 4 HOH 40 340 165 HOH HOH A . F 4 HOH 41 341 15 HOH HOH A . F 4 HOH 42 342 87 HOH HOH A . F 4 HOH 43 343 40 HOH HOH A . F 4 HOH 44 344 50 HOH HOH A . F 4 HOH 45 345 61 HOH HOH A . F 4 HOH 46 346 75 HOH HOH A . F 4 HOH 47 347 29 HOH HOH A . F 4 HOH 48 348 66 HOH HOH A . F 4 HOH 49 349 92 HOH HOH A . F 4 HOH 50 350 49 HOH HOH A . F 4 HOH 51 351 9 HOH HOH A . F 4 HOH 52 352 42 HOH HOH A . F 4 HOH 53 353 74 HOH HOH A . F 4 HOH 54 354 12 HOH HOH A . F 4 HOH 55 355 23 HOH HOH A . F 4 HOH 56 356 63 HOH HOH A . F 4 HOH 57 357 86 HOH HOH A . F 4 HOH 58 358 151 HOH HOH A . F 4 HOH 59 359 38 HOH HOH A . F 4 HOH 60 360 153 HOH HOH A . F 4 HOH 61 361 106 HOH HOH A . F 4 HOH 62 362 78 HOH HOH A . F 4 HOH 63 363 41 HOH HOH A . F 4 HOH 64 364 144 HOH HOH A . F 4 HOH 65 365 20 HOH HOH A . F 4 HOH 66 366 27 HOH HOH A . F 4 HOH 67 367 11 HOH HOH A . F 4 HOH 68 368 160 HOH HOH A . F 4 HOH 69 369 69 HOH HOH A . F 4 HOH 70 370 1 HOH HOH A . F 4 HOH 71 371 68 HOH HOH A . F 4 HOH 72 372 36 HOH HOH A . F 4 HOH 73 373 34 HOH HOH A . F 4 HOH 74 374 152 HOH HOH A . F 4 HOH 75 375 8 HOH HOH A . F 4 HOH 76 376 64 HOH HOH A . F 4 HOH 77 377 124 HOH HOH A . F 4 HOH 78 378 18 HOH HOH A . F 4 HOH 79 379 140 HOH HOH A . F 4 HOH 80 380 56 HOH HOH A . F 4 HOH 81 381 16 HOH HOH A . F 4 HOH 82 382 17 HOH HOH A . F 4 HOH 83 383 35 HOH HOH A . F 4 HOH 84 384 77 HOH HOH A . F 4 HOH 85 385 168 HOH HOH A . F 4 HOH 86 386 85 HOH HOH A . F 4 HOH 87 387 7 HOH HOH A . F 4 HOH 88 388 73 HOH HOH A . F 4 HOH 89 389 104 HOH HOH A . F 4 HOH 90 390 46 HOH HOH A . F 4 HOH 91 391 125 HOH HOH A . F 4 HOH 92 392 120 HOH HOH A . F 4 HOH 93 393 28 HOH HOH A . F 4 HOH 94 394 83 HOH HOH A . F 4 HOH 95 395 93 HOH HOH A . F 4 HOH 96 396 71 HOH HOH A . F 4 HOH 97 397 96 HOH HOH A . F 4 HOH 98 398 10 HOH HOH A . F 4 HOH 99 399 59 HOH HOH A . F 4 HOH 100 400 157 HOH HOH A . F 4 HOH 101 401 55 HOH HOH A . F 4 HOH 102 402 21 HOH HOH A . F 4 HOH 103 403 162 HOH HOH A . F 4 HOH 104 404 98 HOH HOH A . F 4 HOH 105 405 39 HOH HOH A . F 4 HOH 106 406 114 HOH HOH A . F 4 HOH 107 407 170 HOH HOH A . F 4 HOH 108 408 167 HOH HOH A . F 4 HOH 109 409 123 HOH HOH A . F 4 HOH 110 410 139 HOH HOH A . F 4 HOH 111 411 149 HOH HOH A . F 4 HOH 112 412 82 HOH HOH A . F 4 HOH 113 413 6 HOH HOH A . F 4 HOH 114 414 31 HOH HOH A . F 4 HOH 115 415 62 HOH HOH A . F 4 HOH 116 416 111 HOH HOH A . F 4 HOH 117 417 131 HOH HOH A . F 4 HOH 118 418 13 HOH HOH A . F 4 HOH 119 419 148 HOH HOH A . F 4 HOH 120 420 147 HOH HOH A . F 4 HOH 121 421 84 HOH HOH A . F 4 HOH 122 422 156 HOH HOH A . F 4 HOH 123 423 115 HOH HOH A . F 4 HOH 124 424 127 HOH HOH A . F 4 HOH 125 425 135 HOH HOH A . F 4 HOH 126 426 60 HOH HOH A . F 4 HOH 127 427 2 HOH HOH A . F 4 HOH 128 428 150 HOH HOH A . F 4 HOH 129 429 133 HOH HOH A . F 4 HOH 130 430 72 HOH HOH A . F 4 HOH 131 431 134 HOH HOH A . F 4 HOH 132 432 81 HOH HOH A . F 4 HOH 133 433 24 HOH HOH A . F 4 HOH 134 434 166 HOH HOH A . F 4 HOH 135 435 109 HOH HOH A . F 4 HOH 136 436 129 HOH HOH A . F 4 HOH 137 437 54 HOH HOH A . F 4 HOH 138 438 97 HOH HOH A . F 4 HOH 139 439 130 HOH HOH A . F 4 HOH 140 440 53 HOH HOH A . F 4 HOH 141 441 48 HOH HOH A . F 4 HOH 142 442 145 HOH HOH A . F 4 HOH 143 443 136 HOH HOH A . F 4 HOH 144 444 100 HOH HOH A . F 4 HOH 145 445 163 HOH HOH A . F 4 HOH 146 446 51 HOH HOH A . F 4 HOH 147 447 121 HOH HOH A . F 4 HOH 148 448 161 HOH HOH A . F 4 HOH 149 449 137 HOH HOH A . F 4 HOH 150 450 119 HOH HOH A . F 4 HOH 151 451 141 HOH HOH A . F 4 HOH 152 452 102 HOH HOH A . F 4 HOH 153 453 22 HOH HOH A . F 4 HOH 154 454 128 HOH HOH A . F 4 HOH 155 455 110 HOH HOH A . F 4 HOH 156 456 113 HOH HOH A . F 4 HOH 157 457 44 HOH HOH A . F 4 HOH 158 458 112 HOH HOH A . F 4 HOH 159 459 37 HOH HOH A . F 4 HOH 160 460 57 HOH HOH A . F 4 HOH 161 461 142 HOH HOH A . F 4 HOH 162 462 47 HOH HOH A . F 4 HOH 163 463 101 HOH HOH A . F 4 HOH 164 464 122 HOH HOH A . F 4 HOH 165 465 132 HOH HOH A . F 4 HOH 166 466 33 HOH HOH A . F 4 HOH 167 467 45 HOH HOH A . F 4 HOH 168 468 52 HOH HOH A . F 4 HOH 169 469 155 HOH HOH A . F 4 HOH 170 470 158 HOH HOH A . # _pdbx_molecule_features.prd_id PRD_002203 _pdbx_molecule_features.name ;(phenylmethyl) ~{N}-[(12~{S},15~{S},18~{S})-15-(cyclohexylmethyl)-12-(hydroxymethyl)-9,14,17-tris(oxidanylidene)-1,8,13,16,21,22-hexazabicyclo[18.2.1]tricosa-20(23),21-dien-18-yl]carbamate ; _pdbx_molecule_features.type Polypeptide _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_002203 _pdbx_molecule.asym_id E # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 360 ? 1 MORE -24 ? 1 'SSA (A^2)' 8170 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 453 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-05-04 2 'Structure model' 1 1 2016-06-15 3 'Structure model' 1 2 2017-09-13 4 'Structure model' 1 3 2019-12-11 5 'Structure model' 1 4 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Author supporting evidence' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 3 'Structure model' pdbx_audit_support 3 3 'Structure model' pdbx_struct_oper_list 4 4 'Structure model' pdbx_audit_support 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond 7 5 'Structure model' database_2 8 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.journal_id_CSD' 2 3 'Structure model' '_pdbx_audit_support.funding_organization' 3 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 4 'Structure model' '_pdbx_audit_support.funding_organization' 5 5 'Structure model' '_database_2.pdbx_DOI' 6 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_phasing_MR.entry_id 5E0J _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 1.320 _pdbx_phasing_MR.d_res_low_rotation 58.090 _pdbx_phasing_MR.d_res_high_translation 1.320 _pdbx_phasing_MR.d_res_low_translation 58.090 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.3.11 1 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.5.6 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 PRO _pdbx_validate_close_contact.auth_seq_id_1 136 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 301 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.14 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 400 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 434 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_755 _pdbx_validate_symm_contact.dist 2.03 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALA _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 52 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -173.36 _pdbx_validate_torsion.psi 145.13 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS 0 ? CG ? A HIS 7 CG 2 1 Y 1 A HIS 0 ? ND1 ? A HIS 7 ND1 3 1 Y 1 A HIS 0 ? CD2 ? A HIS 7 CD2 4 1 Y 1 A HIS 0 ? CE1 ? A HIS 7 CE1 5 1 Y 1 A HIS 0 ? NE2 ? A HIS 7 NE2 6 1 Y 1 A GLU 75 ? CD ? A GLU 82 CD 7 1 Y 1 A GLU 75 ? OE1 ? A GLU 82 OE1 8 1 Y 1 A GLU 75 ? OE2 ? A GLU 82 OE2 9 1 Y 1 A ARG 108 ? CG ? A ARG 115 CG 10 1 Y 1 A ARG 108 ? CD ? A ARG 115 CD 11 1 Y 1 A ARG 108 ? NE ? A ARG 115 NE 12 1 Y 1 A ARG 108 ? CZ ? A ARG 115 CZ 13 1 Y 1 A ARG 108 ? NH1 ? A ARG 115 NH1 14 1 Y 1 A ARG 108 ? NH2 ? A ARG 115 NH2 15 1 Y 1 A ARG 147 ? CG ? A ARG 154 CG 16 1 Y 1 A ARG 147 ? CD ? A ARG 154 CD 17 1 Y 1 A ARG 147 ? NE ? A ARG 154 NE 18 1 Y 1 A ARG 147 ? CZ ? A ARG 154 CZ 19 1 Y 1 A ARG 147 ? NH1 ? A ARG 154 NH1 20 1 Y 1 A ARG 147 ? NH2 ? A ARG 154 NH2 21 1 Y 1 A LYS 162 ? CD ? A LYS 169 CD 22 1 Y 1 A LYS 162 ? CE ? A LYS 169 CE 23 1 Y 1 A LYS 162 ? NZ ? A LYS 169 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -6 ? A MET 1 2 1 Y 1 A HIS -5 ? A HIS 2 3 1 Y 1 A HIS -4 ? A HIS 3 4 1 Y 1 A HIS -3 ? A HIS 4 5 1 Y 1 A HIS -2 ? A HIS 5 6 1 Y 1 A HIS -1 ? A HIS 6 7 1 Y 1 A GLY 174 ? A GLY 181 8 1 Y 1 A GLU 175 ? A GLU 182 9 1 Y 1 A GLY 176 ? A GLY 183 10 1 Y 1 A GLU 177 ? A GLU 184 11 1 Y 1 A THR 178 ? A THR 185 12 1 Y 1 A ALA 179 ? A ALA 186 13 1 Y 1 A LEU 180 ? A LEU 187 14 1 Y 1 A GLU 181 ? A GLU 188 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5LJ C32 C N N 1 5LJ O41 O N N 2 5LJ O33 O N N 3 5LJ C34 C N N 4 5LJ C35 C Y N 5 5LJ C36 C Y N 6 5LJ C37 C Y N 7 5LJ C38 C Y N 8 5LJ C39 C Y N 9 5LJ C40 C Y N 10 5LJ N19 N N N 11 5LJ C20 C N N 12 5LJ C21 C N N 13 5LJ C22 C N N 14 5LJ C23 C N N 15 5LJ C24 C N N 16 5LJ C25 C N N 17 5LJ N26 N Y N 18 5LJ C27 C Y N 19 5LJ C28 C Y N 20 5LJ C29 C N N 21 5LJ C30 C N S 22 5LJ N31 N N N 23 5LJ C42 C N N 24 5LJ O43 O N N 25 5LJ N44 N Y N 26 5LJ N45 N Y N 27 5LJ N14 N N N 28 5LJ C06 C N S 29 5LJ C05 C N N 30 5LJ O15 O N N 31 5LJ C07 C N N 32 5LJ C08 C N N 33 5LJ C09 C N N 34 5LJ C10 C N N 35 5LJ C11 C N N 36 5LJ C12 C N N 37 5LJ C13 C N N 38 5LJ N04 N N N 39 5LJ C03 C N S 40 5LJ C16 C N N 41 5LJ C17 C N N 42 5LJ C18 C N N 43 5LJ O46 O N N 44 5LJ C02 C N N 45 5LJ O01 O N N 46 5LJ H43 H N N 47 5LJ H44 H N N 48 5LJ H45 H N N 49 5LJ H46 H N N 50 5LJ H47 H N N 51 5LJ H48 H N N 52 5LJ H49 H N N 53 5LJ H25 H N N 54 5LJ H26 H N N 55 5LJ H27 H N N 56 5LJ H28 H N N 57 5LJ H29 H N N 58 5LJ H30 H N N 59 5LJ H31 H N N 60 5LJ H32 H N N 61 5LJ H33 H N N 62 5LJ H34 H N N 63 5LJ H35 H N N 64 5LJ H36 H N N 65 5LJ H37 H N N 66 5LJ H38 H N N 67 5LJ H39 H N N 68 5LJ H40 H N N 69 5LJ H41 H N N 70 5LJ H42 H N N 71 5LJ H20 H N N 72 5LJ H6 H N N 73 5LJ H7 H N N 74 5LJ H8 H N N 75 5LJ H9 H N N 76 5LJ H11 H N N 77 5LJ H10 H N N 78 5LJ H13 H N N 79 5LJ H12 H N N 80 5LJ H15 H N N 81 5LJ H14 H N N 82 5LJ H17 H N N 83 5LJ H16 H N N 84 5LJ H18 H N N 85 5LJ H19 H N N 86 5LJ H5 H N N 87 5LJ H4 H N N 88 5LJ H21 H N N 89 5LJ H22 H N N 90 5LJ H23 H N N 91 5LJ H24 H N N 92 5LJ H2 H N N 93 5LJ H3 H N N 94 5LJ H1 H N N 95 ALA N N N N 96 ALA CA C N S 97 ALA C C N N 98 ALA O O N N 99 ALA CB C N N 100 ALA OXT O N N 101 ALA H H N N 102 ALA H2 H N N 103 ALA HA H N N 104 ALA HB1 H N N 105 ALA HB2 H N N 106 ALA HB3 H N N 107 ALA HXT H N N 108 ARG N N N N 109 ARG CA C N S 110 ARG C C N N 111 ARG O O N N 112 ARG CB C N N 113 ARG CG C N N 114 ARG CD C N N 115 ARG NE N N N 116 ARG CZ C N N 117 ARG NH1 N N N 118 ARG NH2 N N N 119 ARG OXT O N N 120 ARG H H N N 121 ARG H2 H N N 122 ARG HA H N N 123 ARG HB2 H N N 124 ARG HB3 H N N 125 ARG HG2 H N N 126 ARG HG3 H N N 127 ARG HD2 H N N 128 ARG HD3 H N N 129 ARG HE H N N 130 ARG HH11 H N N 131 ARG HH12 H N N 132 ARG HH21 H N N 133 ARG HH22 H N N 134 ARG HXT H N N 135 ASN N N N N 136 ASN CA C N S 137 ASN C C N N 138 ASN O O N N 139 ASN CB C N N 140 ASN CG C N N 141 ASN OD1 O N N 142 ASN ND2 N N N 143 ASN OXT O N N 144 ASN H H N N 145 ASN H2 H N N 146 ASN HA H N N 147 ASN HB2 H N N 148 ASN HB3 H N N 149 ASN HD21 H N N 150 ASN HD22 H N N 151 ASN HXT H N N 152 ASP N N N N 153 ASP CA C N S 154 ASP C C N N 155 ASP O O N N 156 ASP CB C N N 157 ASP CG C N N 158 ASP OD1 O N N 159 ASP OD2 O N N 160 ASP OXT O N N 161 ASP H H N N 162 ASP H2 H N N 163 ASP HA H N N 164 ASP HB2 H N N 165 ASP HB3 H N N 166 ASP HD2 H N N 167 ASP HXT H N N 168 CL CL CL N N 169 CYS N N N N 170 CYS CA C N R 171 CYS C C N N 172 CYS O O N N 173 CYS CB C N N 174 CYS SG S N N 175 CYS OXT O N N 176 CYS H H N N 177 CYS H2 H N N 178 CYS HA H N N 179 CYS HB2 H N N 180 CYS HB3 H N N 181 CYS HG H N N 182 CYS HXT H N N 183 GLN N N N N 184 GLN CA C N S 185 GLN C C N N 186 GLN O O N N 187 GLN CB C N N 188 GLN CG C N N 189 GLN CD C N N 190 GLN OE1 O N N 191 GLN NE2 N N N 192 GLN OXT O N N 193 GLN H H N N 194 GLN H2 H N N 195 GLN HA H N N 196 GLN HB2 H N N 197 GLN HB3 H N N 198 GLN HG2 H N N 199 GLN HG3 H N N 200 GLN HE21 H N N 201 GLN HE22 H N N 202 GLN HXT H N N 203 GLU N N N N 204 GLU CA C N S 205 GLU C C N N 206 GLU O O N N 207 GLU CB C N N 208 GLU CG C N N 209 GLU CD C N N 210 GLU OE1 O N N 211 GLU OE2 O N N 212 GLU OXT O N N 213 GLU H H N N 214 GLU H2 H N N 215 GLU HA H N N 216 GLU HB2 H N N 217 GLU HB3 H N N 218 GLU HG2 H N N 219 GLU HG3 H N N 220 GLU HE2 H N N 221 GLU HXT H N N 222 GLY N N N N 223 GLY CA C N N 224 GLY C C N N 225 GLY O O N N 226 GLY OXT O N N 227 GLY H H N N 228 GLY H2 H N N 229 GLY HA2 H N N 230 GLY HA3 H N N 231 GLY HXT H N N 232 HIS N N N N 233 HIS CA C N S 234 HIS C C N N 235 HIS O O N N 236 HIS CB C N N 237 HIS CG C Y N 238 HIS ND1 N Y N 239 HIS CD2 C Y N 240 HIS CE1 C Y N 241 HIS NE2 N Y N 242 HIS OXT O N N 243 HIS H H N N 244 HIS H2 H N N 245 HIS HA H N N 246 HIS HB2 H N N 247 HIS HB3 H N N 248 HIS HD1 H N N 249 HIS HD2 H N N 250 HIS HE1 H N N 251 HIS HE2 H N N 252 HIS HXT H N N 253 HOH O O N N 254 HOH H1 H N N 255 HOH H2 H N N 256 ILE N N N N 257 ILE CA C N S 258 ILE C C N N 259 ILE O O N N 260 ILE CB C N S 261 ILE CG1 C N N 262 ILE CG2 C N N 263 ILE CD1 C N N 264 ILE OXT O N N 265 ILE H H N N 266 ILE H2 H N N 267 ILE HA H N N 268 ILE HB H N N 269 ILE HG12 H N N 270 ILE HG13 H N N 271 ILE HG21 H N N 272 ILE HG22 H N N 273 ILE HG23 H N N 274 ILE HD11 H N N 275 ILE HD12 H N N 276 ILE HD13 H N N 277 ILE HXT H N N 278 LEU N N N N 279 LEU CA C N S 280 LEU C C N N 281 LEU O O N N 282 LEU CB C N N 283 LEU CG C N N 284 LEU CD1 C N N 285 LEU CD2 C N N 286 LEU OXT O N N 287 LEU H H N N 288 LEU H2 H N N 289 LEU HA H N N 290 LEU HB2 H N N 291 LEU HB3 H N N 292 LEU HG H N N 293 LEU HD11 H N N 294 LEU HD12 H N N 295 LEU HD13 H N N 296 LEU HD21 H N N 297 LEU HD22 H N N 298 LEU HD23 H N N 299 LEU HXT H N N 300 LYS N N N N 301 LYS CA C N S 302 LYS C C N N 303 LYS O O N N 304 LYS CB C N N 305 LYS CG C N N 306 LYS CD C N N 307 LYS CE C N N 308 LYS NZ N N N 309 LYS OXT O N N 310 LYS H H N N 311 LYS H2 H N N 312 LYS HA H N N 313 LYS HB2 H N N 314 LYS HB3 H N N 315 LYS HG2 H N N 316 LYS HG3 H N N 317 LYS HD2 H N N 318 LYS HD3 H N N 319 LYS HE2 H N N 320 LYS HE3 H N N 321 LYS HZ1 H N N 322 LYS HZ2 H N N 323 LYS HZ3 H N N 324 LYS HXT H N N 325 MET N N N N 326 MET CA C N S 327 MET C C N N 328 MET O O N N 329 MET CB C N N 330 MET CG C N N 331 MET SD S N N 332 MET CE C N N 333 MET OXT O N N 334 MET H H N N 335 MET H2 H N N 336 MET HA H N N 337 MET HB2 H N N 338 MET HB3 H N N 339 MET HG2 H N N 340 MET HG3 H N N 341 MET HE1 H N N 342 MET HE2 H N N 343 MET HE3 H N N 344 MET HXT H N N 345 PHE N N N N 346 PHE CA C N S 347 PHE C C N N 348 PHE O O N N 349 PHE CB C N N 350 PHE CG C Y N 351 PHE CD1 C Y N 352 PHE CD2 C Y N 353 PHE CE1 C Y N 354 PHE CE2 C Y N 355 PHE CZ C Y N 356 PHE OXT O N N 357 PHE H H N N 358 PHE H2 H N N 359 PHE HA H N N 360 PHE HB2 H N N 361 PHE HB3 H N N 362 PHE HD1 H N N 363 PHE HD2 H N N 364 PHE HE1 H N N 365 PHE HE2 H N N 366 PHE HZ H N N 367 PHE HXT H N N 368 PRO N N N N 369 PRO CA C N S 370 PRO C C N N 371 PRO O O N N 372 PRO CB C N N 373 PRO CG C N N 374 PRO CD C N N 375 PRO OXT O N N 376 PRO H H N N 377 PRO HA H N N 378 PRO HB2 H N N 379 PRO HB3 H N N 380 PRO HG2 H N N 381 PRO HG3 H N N 382 PRO HD2 H N N 383 PRO HD3 H N N 384 PRO HXT H N N 385 SER N N N N 386 SER CA C N S 387 SER C C N N 388 SER O O N N 389 SER CB C N N 390 SER OG O N N 391 SER OXT O N N 392 SER H H N N 393 SER H2 H N N 394 SER HA H N N 395 SER HB2 H N N 396 SER HB3 H N N 397 SER HG H N N 398 SER HXT H N N 399 THR N N N N 400 THR CA C N S 401 THR C C N N 402 THR O O N N 403 THR CB C N R 404 THR OG1 O N N 405 THR CG2 C N N 406 THR OXT O N N 407 THR H H N N 408 THR H2 H N N 409 THR HA H N N 410 THR HB H N N 411 THR HG1 H N N 412 THR HG21 H N N 413 THR HG22 H N N 414 THR HG23 H N N 415 THR HXT H N N 416 TRP N N N N 417 TRP CA C N S 418 TRP C C N N 419 TRP O O N N 420 TRP CB C N N 421 TRP CG C Y N 422 TRP CD1 C Y N 423 TRP CD2 C Y N 424 TRP NE1 N Y N 425 TRP CE2 C Y N 426 TRP CE3 C Y N 427 TRP CZ2 C Y N 428 TRP CZ3 C Y N 429 TRP CH2 C Y N 430 TRP OXT O N N 431 TRP H H N N 432 TRP H2 H N N 433 TRP HA H N N 434 TRP HB2 H N N 435 TRP HB3 H N N 436 TRP HD1 H N N 437 TRP HE1 H N N 438 TRP HE3 H N N 439 TRP HZ2 H N N 440 TRP HZ3 H N N 441 TRP HH2 H N N 442 TRP HXT H N N 443 TYR N N N N 444 TYR CA C N S 445 TYR C C N N 446 TYR O O N N 447 TYR CB C N N 448 TYR CG C Y N 449 TYR CD1 C Y N 450 TYR CD2 C Y N 451 TYR CE1 C Y N 452 TYR CE2 C Y N 453 TYR CZ C Y N 454 TYR OH O N N 455 TYR OXT O N N 456 TYR H H N N 457 TYR H2 H N N 458 TYR HA H N N 459 TYR HB2 H N N 460 TYR HB3 H N N 461 TYR HD1 H N N 462 TYR HD2 H N N 463 TYR HE1 H N N 464 TYR HE2 H N N 465 TYR HH H N N 466 TYR HXT H N N 467 VAL N N N N 468 VAL CA C N S 469 VAL C C N N 470 VAL O O N N 471 VAL CB C N N 472 VAL CG1 C N N 473 VAL CG2 C N N 474 VAL OXT O N N 475 VAL H H N N 476 VAL H2 H N N 477 VAL HA H N N 478 VAL HB H N N 479 VAL HG11 H N N 480 VAL HG12 H N N 481 VAL HG13 H N N 482 VAL HG21 H N N 483 VAL HG22 H N N 484 VAL HG23 H N N 485 VAL HXT H N N 486 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5LJ O01 C02 sing N N 1 5LJ C02 C03 sing N N 2 5LJ C03 C16 sing N N 3 5LJ C03 N04 sing N N 4 5LJ N04 C05 sing N N 5 5LJ C05 O15 doub N N 6 5LJ C05 C06 sing N N 7 5LJ C06 C07 sing N N 8 5LJ C06 N14 sing N N 9 5LJ C07 C08 sing N N 10 5LJ C08 C13 sing N N 11 5LJ C08 C09 sing N N 12 5LJ C09 C10 sing N N 13 5LJ C10 C11 sing N N 14 5LJ C11 C12 sing N N 15 5LJ C12 C13 sing N N 16 5LJ N14 C42 sing N N 17 5LJ C16 C17 sing N N 18 5LJ C17 C18 sing N N 19 5LJ C18 N19 sing N N 20 5LJ C18 O46 doub N N 21 5LJ N19 C20 sing N N 22 5LJ C20 C21 sing N N 23 5LJ C21 C22 sing N N 24 5LJ C22 C23 sing N N 25 5LJ C23 C24 sing N N 26 5LJ C24 C25 sing N N 27 5LJ C25 N26 sing N N 28 5LJ N26 C27 sing Y N 29 5LJ N26 N45 sing Y N 30 5LJ C27 C28 doub Y N 31 5LJ C28 N44 sing Y N 32 5LJ C28 C29 sing N N 33 5LJ C29 C30 sing N N 34 5LJ C30 C42 sing N N 35 5LJ C30 N31 sing N N 36 5LJ N31 C32 sing N N 37 5LJ C32 O41 doub N N 38 5LJ C32 O33 sing N N 39 5LJ O33 C34 sing N N 40 5LJ C34 C35 sing N N 41 5LJ C35 C36 doub Y N 42 5LJ C35 C40 sing Y N 43 5LJ C36 C37 sing Y N 44 5LJ C37 C38 doub Y N 45 5LJ C38 C39 sing Y N 46 5LJ C39 C40 doub Y N 47 5LJ C42 O43 doub N N 48 5LJ N44 N45 doub Y N 49 5LJ O01 H1 sing N N 50 5LJ C02 H2 sing N N 51 5LJ C02 H3 sing N N 52 5LJ C03 H4 sing N N 53 5LJ N04 H5 sing N N 54 5LJ C06 H6 sing N N 55 5LJ C07 H7 sing N N 56 5LJ C07 H8 sing N N 57 5LJ C08 H9 sing N N 58 5LJ C09 H10 sing N N 59 5LJ C09 H11 sing N N 60 5LJ C10 H12 sing N N 61 5LJ C10 H13 sing N N 62 5LJ C11 H14 sing N N 63 5LJ C11 H15 sing N N 64 5LJ C12 H16 sing N N 65 5LJ C12 H17 sing N N 66 5LJ C13 H18 sing N N 67 5LJ C13 H19 sing N N 68 5LJ N14 H20 sing N N 69 5LJ C16 H21 sing N N 70 5LJ C16 H22 sing N N 71 5LJ C17 H23 sing N N 72 5LJ C17 H24 sing N N 73 5LJ N19 H25 sing N N 74 5LJ C20 H26 sing N N 75 5LJ C20 H27 sing N N 76 5LJ C21 H28 sing N N 77 5LJ C21 H29 sing N N 78 5LJ C22 H30 sing N N 79 5LJ C22 H31 sing N N 80 5LJ C23 H32 sing N N 81 5LJ C23 H33 sing N N 82 5LJ C24 H34 sing N N 83 5LJ C24 H35 sing N N 84 5LJ C25 H36 sing N N 85 5LJ C25 H37 sing N N 86 5LJ C27 H38 sing N N 87 5LJ C29 H39 sing N N 88 5LJ C29 H40 sing N N 89 5LJ C30 H41 sing N N 90 5LJ N31 H42 sing N N 91 5LJ C34 H43 sing N N 92 5LJ C34 H44 sing N N 93 5LJ C36 H45 sing N N 94 5LJ C37 H46 sing N N 95 5LJ C38 H47 sing N N 96 5LJ C39 H48 sing N N 97 5LJ C40 H49 sing N N 98 ALA N CA sing N N 99 ALA N H sing N N 100 ALA N H2 sing N N 101 ALA CA C sing N N 102 ALA CA CB sing N N 103 ALA CA HA sing N N 104 ALA C O doub N N 105 ALA C OXT sing N N 106 ALA CB HB1 sing N N 107 ALA CB HB2 sing N N 108 ALA CB HB3 sing N N 109 ALA OXT HXT sing N N 110 ARG N CA sing N N 111 ARG N H sing N N 112 ARG N H2 sing N N 113 ARG CA C sing N N 114 ARG CA CB sing N N 115 ARG CA HA sing N N 116 ARG C O doub N N 117 ARG C OXT sing N N 118 ARG CB CG sing N N 119 ARG CB HB2 sing N N 120 ARG CB HB3 sing N N 121 ARG CG CD sing N N 122 ARG CG HG2 sing N N 123 ARG CG HG3 sing N N 124 ARG CD NE sing N N 125 ARG CD HD2 sing N N 126 ARG CD HD3 sing N N 127 ARG NE CZ sing N N 128 ARG NE HE sing N N 129 ARG CZ NH1 sing N N 130 ARG CZ NH2 doub N N 131 ARG NH1 HH11 sing N N 132 ARG NH1 HH12 sing N N 133 ARG NH2 HH21 sing N N 134 ARG NH2 HH22 sing N N 135 ARG OXT HXT sing N N 136 ASN N CA sing N N 137 ASN N H sing N N 138 ASN N H2 sing N N 139 ASN CA C sing N N 140 ASN CA CB sing N N 141 ASN CA HA sing N N 142 ASN C O doub N N 143 ASN C OXT sing N N 144 ASN CB CG sing N N 145 ASN CB HB2 sing N N 146 ASN CB HB3 sing N N 147 ASN CG OD1 doub N N 148 ASN CG ND2 sing N N 149 ASN ND2 HD21 sing N N 150 ASN ND2 HD22 sing N N 151 ASN OXT HXT sing N N 152 ASP N CA sing N N 153 ASP N H sing N N 154 ASP N H2 sing N N 155 ASP CA C sing N N 156 ASP CA CB sing N N 157 ASP CA HA sing N N 158 ASP C O doub N N 159 ASP C OXT sing N N 160 ASP CB CG sing N N 161 ASP CB HB2 sing N N 162 ASP CB HB3 sing N N 163 ASP CG OD1 doub N N 164 ASP CG OD2 sing N N 165 ASP OD2 HD2 sing N N 166 ASP OXT HXT sing N N 167 CYS N CA sing N N 168 CYS N H sing N N 169 CYS N H2 sing N N 170 CYS CA C sing N N 171 CYS CA CB sing N N 172 CYS CA HA sing N N 173 CYS C O doub N N 174 CYS C OXT sing N N 175 CYS CB SG sing N N 176 CYS CB HB2 sing N N 177 CYS CB HB3 sing N N 178 CYS SG HG sing N N 179 CYS OXT HXT sing N N 180 GLN N CA sing N N 181 GLN N H sing N N 182 GLN N H2 sing N N 183 GLN CA C sing N N 184 GLN CA CB sing N N 185 GLN CA HA sing N N 186 GLN C O doub N N 187 GLN C OXT sing N N 188 GLN CB CG sing N N 189 GLN CB HB2 sing N N 190 GLN CB HB3 sing N N 191 GLN CG CD sing N N 192 GLN CG HG2 sing N N 193 GLN CG HG3 sing N N 194 GLN CD OE1 doub N N 195 GLN CD NE2 sing N N 196 GLN NE2 HE21 sing N N 197 GLN NE2 HE22 sing N N 198 GLN OXT HXT sing N N 199 GLU N CA sing N N 200 GLU N H sing N N 201 GLU N H2 sing N N 202 GLU CA C sing N N 203 GLU CA CB sing N N 204 GLU CA HA sing N N 205 GLU C O doub N N 206 GLU C OXT sing N N 207 GLU CB CG sing N N 208 GLU CB HB2 sing N N 209 GLU CB HB3 sing N N 210 GLU CG CD sing N N 211 GLU CG HG2 sing N N 212 GLU CG HG3 sing N N 213 GLU CD OE1 doub N N 214 GLU CD OE2 sing N N 215 GLU OE2 HE2 sing N N 216 GLU OXT HXT sing N N 217 GLY N CA sing N N 218 GLY N H sing N N 219 GLY N H2 sing N N 220 GLY CA C sing N N 221 GLY CA HA2 sing N N 222 GLY CA HA3 sing N N 223 GLY C O doub N N 224 GLY C OXT sing N N 225 GLY OXT HXT sing N N 226 HIS N CA sing N N 227 HIS N H sing N N 228 HIS N H2 sing N N 229 HIS CA C sing N N 230 HIS CA CB sing N N 231 HIS CA HA sing N N 232 HIS C O doub N N 233 HIS C OXT sing N N 234 HIS CB CG sing N N 235 HIS CB HB2 sing N N 236 HIS CB HB3 sing N N 237 HIS CG ND1 sing Y N 238 HIS CG CD2 doub Y N 239 HIS ND1 CE1 doub Y N 240 HIS ND1 HD1 sing N N 241 HIS CD2 NE2 sing Y N 242 HIS CD2 HD2 sing N N 243 HIS CE1 NE2 sing Y N 244 HIS CE1 HE1 sing N N 245 HIS NE2 HE2 sing N N 246 HIS OXT HXT sing N N 247 HOH O H1 sing N N 248 HOH O H2 sing N N 249 ILE N CA sing N N 250 ILE N H sing N N 251 ILE N H2 sing N N 252 ILE CA C sing N N 253 ILE CA CB sing N N 254 ILE CA HA sing N N 255 ILE C O doub N N 256 ILE C OXT sing N N 257 ILE CB CG1 sing N N 258 ILE CB CG2 sing N N 259 ILE CB HB sing N N 260 ILE CG1 CD1 sing N N 261 ILE CG1 HG12 sing N N 262 ILE CG1 HG13 sing N N 263 ILE CG2 HG21 sing N N 264 ILE CG2 HG22 sing N N 265 ILE CG2 HG23 sing N N 266 ILE CD1 HD11 sing N N 267 ILE CD1 HD12 sing N N 268 ILE CD1 HD13 sing N N 269 ILE OXT HXT sing N N 270 LEU N CA sing N N 271 LEU N H sing N N 272 LEU N H2 sing N N 273 LEU CA C sing N N 274 LEU CA CB sing N N 275 LEU CA HA sing N N 276 LEU C O doub N N 277 LEU C OXT sing N N 278 LEU CB CG sing N N 279 LEU CB HB2 sing N N 280 LEU CB HB3 sing N N 281 LEU CG CD1 sing N N 282 LEU CG CD2 sing N N 283 LEU CG HG sing N N 284 LEU CD1 HD11 sing N N 285 LEU CD1 HD12 sing N N 286 LEU CD1 HD13 sing N N 287 LEU CD2 HD21 sing N N 288 LEU CD2 HD22 sing N N 289 LEU CD2 HD23 sing N N 290 LEU OXT HXT sing N N 291 LYS N CA sing N N 292 LYS N H sing N N 293 LYS N H2 sing N N 294 LYS CA C sing N N 295 LYS CA CB sing N N 296 LYS CA HA sing N N 297 LYS C O doub N N 298 LYS C OXT sing N N 299 LYS CB CG sing N N 300 LYS CB HB2 sing N N 301 LYS CB HB3 sing N N 302 LYS CG CD sing N N 303 LYS CG HG2 sing N N 304 LYS CG HG3 sing N N 305 LYS CD CE sing N N 306 LYS CD HD2 sing N N 307 LYS CD HD3 sing N N 308 LYS CE NZ sing N N 309 LYS CE HE2 sing N N 310 LYS CE HE3 sing N N 311 LYS NZ HZ1 sing N N 312 LYS NZ HZ2 sing N N 313 LYS NZ HZ3 sing N N 314 LYS OXT HXT sing N N 315 MET N CA sing N N 316 MET N H sing N N 317 MET N H2 sing N N 318 MET CA C sing N N 319 MET CA CB sing N N 320 MET CA HA sing N N 321 MET C O doub N N 322 MET C OXT sing N N 323 MET CB CG sing N N 324 MET CB HB2 sing N N 325 MET CB HB3 sing N N 326 MET CG SD sing N N 327 MET CG HG2 sing N N 328 MET CG HG3 sing N N 329 MET SD CE sing N N 330 MET CE HE1 sing N N 331 MET CE HE2 sing N N 332 MET CE HE3 sing N N 333 MET OXT HXT sing N N 334 PHE N CA sing N N 335 PHE N H sing N N 336 PHE N H2 sing N N 337 PHE CA C sing N N 338 PHE CA CB sing N N 339 PHE CA HA sing N N 340 PHE C O doub N N 341 PHE C OXT sing N N 342 PHE CB CG sing N N 343 PHE CB HB2 sing N N 344 PHE CB HB3 sing N N 345 PHE CG CD1 doub Y N 346 PHE CG CD2 sing Y N 347 PHE CD1 CE1 sing Y N 348 PHE CD1 HD1 sing N N 349 PHE CD2 CE2 doub Y N 350 PHE CD2 HD2 sing N N 351 PHE CE1 CZ doub Y N 352 PHE CE1 HE1 sing N N 353 PHE CE2 CZ sing Y N 354 PHE CE2 HE2 sing N N 355 PHE CZ HZ sing N N 356 PHE OXT HXT sing N N 357 PRO N CA sing N N 358 PRO N CD sing N N 359 PRO N H sing N N 360 PRO CA C sing N N 361 PRO CA CB sing N N 362 PRO CA HA sing N N 363 PRO C O doub N N 364 PRO C OXT sing N N 365 PRO CB CG sing N N 366 PRO CB HB2 sing N N 367 PRO CB HB3 sing N N 368 PRO CG CD sing N N 369 PRO CG HG2 sing N N 370 PRO CG HG3 sing N N 371 PRO CD HD2 sing N N 372 PRO CD HD3 sing N N 373 PRO OXT HXT sing N N 374 SER N CA sing N N 375 SER N H sing N N 376 SER N H2 sing N N 377 SER CA C sing N N 378 SER CA CB sing N N 379 SER CA HA sing N N 380 SER C O doub N N 381 SER C OXT sing N N 382 SER CB OG sing N N 383 SER CB HB2 sing N N 384 SER CB HB3 sing N N 385 SER OG HG sing N N 386 SER OXT HXT sing N N 387 THR N CA sing N N 388 THR N H sing N N 389 THR N H2 sing N N 390 THR CA C sing N N 391 THR CA CB sing N N 392 THR CA HA sing N N 393 THR C O doub N N 394 THR C OXT sing N N 395 THR CB OG1 sing N N 396 THR CB CG2 sing N N 397 THR CB HB sing N N 398 THR OG1 HG1 sing N N 399 THR CG2 HG21 sing N N 400 THR CG2 HG22 sing N N 401 THR CG2 HG23 sing N N 402 THR OXT HXT sing N N 403 TRP N CA sing N N 404 TRP N H sing N N 405 TRP N H2 sing N N 406 TRP CA C sing N N 407 TRP CA CB sing N N 408 TRP CA HA sing N N 409 TRP C O doub N N 410 TRP C OXT sing N N 411 TRP CB CG sing N N 412 TRP CB HB2 sing N N 413 TRP CB HB3 sing N N 414 TRP CG CD1 doub Y N 415 TRP CG CD2 sing Y N 416 TRP CD1 NE1 sing Y N 417 TRP CD1 HD1 sing N N 418 TRP CD2 CE2 doub Y N 419 TRP CD2 CE3 sing Y N 420 TRP NE1 CE2 sing Y N 421 TRP NE1 HE1 sing N N 422 TRP CE2 CZ2 sing Y N 423 TRP CE3 CZ3 doub Y N 424 TRP CE3 HE3 sing N N 425 TRP CZ2 CH2 doub Y N 426 TRP CZ2 HZ2 sing N N 427 TRP CZ3 CH2 sing Y N 428 TRP CZ3 HZ3 sing N N 429 TRP CH2 HH2 sing N N 430 TRP OXT HXT sing N N 431 TYR N CA sing N N 432 TYR N H sing N N 433 TYR N H2 sing N N 434 TYR CA C sing N N 435 TYR CA CB sing N N 436 TYR CA HA sing N N 437 TYR C O doub N N 438 TYR C OXT sing N N 439 TYR CB CG sing N N 440 TYR CB HB2 sing N N 441 TYR CB HB3 sing N N 442 TYR CG CD1 doub Y N 443 TYR CG CD2 sing Y N 444 TYR CD1 CE1 sing Y N 445 TYR CD1 HD1 sing N N 446 TYR CD2 CE2 doub Y N 447 TYR CD2 HD2 sing N N 448 TYR CE1 CZ doub Y N 449 TYR CE1 HE1 sing N N 450 TYR CE2 CZ sing Y N 451 TYR CE2 HE2 sing N N 452 TYR CZ OH sing N N 453 TYR OH HH sing N N 454 TYR OXT HXT sing N N 455 VAL N CA sing N N 456 VAL N H sing N N 457 VAL N H2 sing N N 458 VAL CA C sing N N 459 VAL CA CB sing N N 460 VAL CA HA sing N N 461 VAL C O doub N N 462 VAL C OXT sing N N 463 VAL CB CG1 sing N N 464 VAL CB CG2 sing N N 465 VAL CB HB sing N N 466 VAL CG1 HG11 sing N N 467 VAL CG1 HG12 sing N N 468 VAL CG1 HG13 sing N N 469 VAL CG2 HG21 sing N N 470 VAL CG2 HG22 sing N N 471 VAL CG2 HG23 sing N N 472 VAL OXT HXT sing N N 473 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 5R01AI109039 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 ;(phenylmethyl) ~{N}-[(12~{S},15~{S},18~{S})-15-(cyclohexylmethyl)-12-(hydroxymethyl)-9,14,17-tris(oxidanylidene)-1,8,13,16,21,22-hexazabicyclo[18.2.1]tricosa-20(23),21-dien-18-yl]carbamate ; 5LJ 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3UR9 _pdbx_initial_refinement_model.details 'PDB entry 3UR9' #