data_5GI0 # _entry.id 5GI0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5GI0 WWPDB D_1300000802 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5GI0 _pdbx_database_status.recvd_initial_deposition_date 2016-06-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yan, J.' 1 'Zhang, Q.' 2 'Guan, Z.' 3 'Zou, T.' 4 'Yin, P.' 5 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Plants' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2055-0278 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 3 _citation.language ? _citation.page_first 17037 _citation.page_last 17037 _citation.title 'MORF9 increases the RNA-binding activity of PLS-type pentatricopeptide repeat protein in plastid RNA editing' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/nplants.2017.37 _citation.pdbx_database_id_PubMed 28394309 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Yan, J.' 1 primary 'Zhang, Q.' 2 primary 'Guan, Z.' 3 primary 'Wang, Q.' 4 primary 'Li, L.' 5 primary 'Ruan, F.' 6 primary 'Lin, R.' 7 primary 'Zou, T.' 8 primary 'Yin, P.' 9 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 103.53 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5GI0 _cell.details ? _cell.formula_units_Z ? _cell.length_a 76.812 _cell.length_a_esd ? _cell.length_b 50.690 _cell.length_b_esd ? _cell.length_c 38.318 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5GI0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Multiple organellar RNA editing factor 9, chloroplastic' 15734.685 1 ? 'C13S, C115S' ? ? 2 water nat water 18.015 53 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RNA editing-interacting protein 9' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)EQRETI(MSE)LPGSDYNHWLIV(MSE)EFPKDPAPSRDQ(MSE)IDTYLNTLATVLGS(MSE)EEAKKN(MSE) YAFSTTTYTGFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPSTYPTYQPKQLEHHHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MEQRETIMLPGSDYNHWLIVMEFPKDPAPSRDQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTIDEETSEKFK GLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPSTYPTYQPKQLEHHHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLU n 1 3 GLN n 1 4 ARG n 1 5 GLU n 1 6 THR n 1 7 ILE n 1 8 MSE n 1 9 LEU n 1 10 PRO n 1 11 GLY n 1 12 SER n 1 13 ASP n 1 14 TYR n 1 15 ASN n 1 16 HIS n 1 17 TRP n 1 18 LEU n 1 19 ILE n 1 20 VAL n 1 21 MSE n 1 22 GLU n 1 23 PHE n 1 24 PRO n 1 25 LYS n 1 26 ASP n 1 27 PRO n 1 28 ALA n 1 29 PRO n 1 30 SER n 1 31 ARG n 1 32 ASP n 1 33 GLN n 1 34 MSE n 1 35 ILE n 1 36 ASP n 1 37 THR n 1 38 TYR n 1 39 LEU n 1 40 ASN n 1 41 THR n 1 42 LEU n 1 43 ALA n 1 44 THR n 1 45 VAL n 1 46 LEU n 1 47 GLY n 1 48 SER n 1 49 MSE n 1 50 GLU n 1 51 GLU n 1 52 ALA n 1 53 LYS n 1 54 LYS n 1 55 ASN n 1 56 MSE n 1 57 TYR n 1 58 ALA n 1 59 PHE n 1 60 SER n 1 61 THR n 1 62 THR n 1 63 THR n 1 64 TYR n 1 65 THR n 1 66 GLY n 1 67 PHE n 1 68 GLN n 1 69 CYS n 1 70 THR n 1 71 ILE n 1 72 ASP n 1 73 GLU n 1 74 GLU n 1 75 THR n 1 76 SER n 1 77 GLU n 1 78 LYS n 1 79 PHE n 1 80 LYS n 1 81 GLY n 1 82 LEU n 1 83 PRO n 1 84 GLY n 1 85 VAL n 1 86 LEU n 1 87 TRP n 1 88 VAL n 1 89 LEU n 1 90 PRO n 1 91 ASP n 1 92 SER n 1 93 TYR n 1 94 ILE n 1 95 ASP n 1 96 VAL n 1 97 LYS n 1 98 ASN n 1 99 LYS n 1 100 ASP n 1 101 TYR n 1 102 GLY n 1 103 GLY n 1 104 ASP n 1 105 LYS n 1 106 TYR n 1 107 ILE n 1 108 ASN n 1 109 GLY n 1 110 GLU n 1 111 ILE n 1 112 ILE n 1 113 PRO n 1 114 SER n 1 115 THR n 1 116 TYR n 1 117 PRO n 1 118 THR n 1 119 TYR n 1 120 GLN n 1 121 PRO n 1 122 LYS n 1 123 GLN n 1 124 LEU n 1 125 GLU n 1 126 HIS n 1 127 HIS n 1 128 HIS n 1 129 HIS n 1 130 HIS n 1 131 HIS n 1 132 HIS n 1 133 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 133 _entity_src_gen.gene_src_common_name 'Mouse-ear cress' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'MORF9, RIP9, At1g11430, T23J18.10' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Arabidopsis thaliana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3702 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MORF9_ARATH _struct_ref.pdbx_db_accession Q9LPZ1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EQRETIMLPGCDYNHWLIVMEFPKDPAPSRDQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTIDEETSEKFKG LPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPCTYPTYQPKQ ; _struct_ref.pdbx_align_begin 75 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5GI0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 123 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9LPZ1 _struct_ref_seq.db_align_beg 75 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 196 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 3 _struct_ref_seq.pdbx_auth_seq_align_end 124 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5GI0 MSE A 1 ? UNP Q9LPZ1 ? ? 'initiating methionine' 2 1 1 5GI0 SER A 12 ? UNP Q9LPZ1 CYS 85 'engineered mutation' 13 2 1 5GI0 SER A 114 ? UNP Q9LPZ1 CYS 187 'engineered mutation' 115 3 1 5GI0 LEU A 124 ? UNP Q9LPZ1 ? ? 'expression tag' 125 4 1 5GI0 GLU A 125 ? UNP Q9LPZ1 ? ? 'expression tag' 126 5 1 5GI0 HIS A 126 ? UNP Q9LPZ1 ? ? 'expression tag' 127 6 1 5GI0 HIS A 127 ? UNP Q9LPZ1 ? ? 'expression tag' 128 7 1 5GI0 HIS A 128 ? UNP Q9LPZ1 ? ? 'expression tag' 129 8 1 5GI0 HIS A 129 ? UNP Q9LPZ1 ? ? 'expression tag' 130 9 1 5GI0 HIS A 130 ? UNP Q9LPZ1 ? ? 'expression tag' 131 10 1 5GI0 HIS A 131 ? UNP Q9LPZ1 ? ? 'expression tag' 132 11 1 5GI0 HIS A 132 ? UNP Q9LPZ1 ? ? 'expression tag' 133 12 1 5GI0 HIS A 133 ? UNP Q9LPZ1 ? ? 'expression tag' 134 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5GI0 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 47.58 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.9 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'sodium bromide,sodium thiocyanate, PEG 3350, MES' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-04-05 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979305 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979305 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL17U _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5GI0 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.04 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 9121 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.47 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 8.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 32.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high . _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5GI0 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.044 _refine.ls_d_res_low 29.870 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 9116 _refine.ls_number_reflns_R_free 450 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.47 _refine.ls_percent_reflns_R_free 4.94 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2035 _refine.ls_R_factor_R_free 0.2352 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2018 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 29.80 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.17 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 5GI0 _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 974 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 53 _refine_hist.number_atoms_total 1027 _refine_hist.d_res_high 2.044 _refine_hist.d_res_low 29.870 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? 1003 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.940 ? 1365 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 13.710 ? 594 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.054 ? 145 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 175 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.0444 2.3401 . . 149 2859 100.00 . . . 0.2867 . 0.2090 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3401 2.9479 . . 153 2901 100.00 . . . 0.2694 . 0.2272 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9479 29.8730 . . 148 2906 99.00 . . . 0.2101 . 0.1905 . . . . . . . . . . # _struct.entry_id 5GI0 _struct.title 'Crystal structure of RNA editing factor MORF9/RIP9' _struct.pdbx_descriptor 'Multiple organellar RNA editing factor 9, chloroplastic' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5GI0 _struct_keywords.text 'RNA editing factor, MORF9, RIP9, RNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 30 ? GLY A 47 ? SER A 31 GLY A 48 1 ? 18 HELX_P HELX_P2 AA2 SER A 48 ? ASN A 55 ? SER A 49 ASN A 56 1 ? 8 HELX_P HELX_P3 AA3 ASP A 72 ? LYS A 78 ? ASP A 73 LYS A 79 1 ? 7 HELX_P HELX_P4 AA4 PRO A 121 ? GLU A 125 ? PRO A 122 GLU A 126 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A VAL 20 C ? ? ? 1_555 A MSE 21 N ? ? A VAL 21 A MSE 22 1_555 ? ? ? ? ? ? ? 1.323 ? covale2 covale both ? A MSE 21 C ? ? ? 1_555 A GLU 22 N ? ? A MSE 22 A GLU 23 1_555 ? ? ? ? ? ? ? 1.319 ? covale3 covale both ? A GLN 33 C ? ? ? 1_555 A MSE 34 N ? ? A GLN 34 A MSE 35 1_555 ? ? ? ? ? ? ? 1.325 ? covale4 covale both ? A MSE 34 C ? ? ? 1_555 A ILE 35 N ? ? A MSE 35 A ILE 36 1_555 ? ? ? ? ? ? ? 1.337 ? covale5 covale both ? A SER 48 C ? ? ? 1_555 A MSE 49 N ? ? A SER 49 A MSE 50 1_555 ? ? ? ? ? ? ? 1.334 ? covale6 covale both ? A MSE 49 C ? ? ? 1_555 A GLU 50 N ? ? A MSE 50 A GLU 51 1_555 ? ? ? ? ? ? ? 1.335 ? covale7 covale both ? A ASN 55 C ? ? ? 1_555 A MSE 56 N ? ? A ASN 56 A MSE 57 1_555 ? ? ? ? ? ? ? 1.325 ? covale8 covale both ? A MSE 56 C ? ? ? 1_555 A TYR 57 N ? ? A MSE 57 A TYR 58 1_555 ? ? ? ? ? ? ? 1.335 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 85 ? PRO A 90 ? VAL A 86 PRO A 91 AA1 2 TRP A 17 ? MSE A 21 ? TRP A 18 MSE A 22 AA1 3 THR A 65 ? CYS A 69 ? THR A 66 CYS A 70 AA1 4 MSE A 56 ? THR A 61 ? MSE A 57 THR A 62 AA1 5 ASP A 104 ? ILE A 107 ? ASP A 105 ILE A 108 AA1 6 GLU A 110 ? ILE A 112 ? GLU A 111 ILE A 113 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LEU A 89 ? O LEU A 90 N LEU A 18 ? N LEU A 19 AA1 2 3 N ILE A 19 ? N ILE A 20 O PHE A 67 ? O PHE A 68 AA1 3 4 O GLN A 68 ? O GLN A 69 N ALA A 58 ? N ALA A 59 AA1 4 5 N PHE A 59 ? N PHE A 60 O ASP A 104 ? O ASP A 105 AA1 5 6 N ILE A 107 ? N ILE A 108 O GLU A 110 ? O GLU A 111 # _atom_sites.entry_id 5GI0 _atom_sites.fract_transf_matrix[1][1] 0.013019 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003133 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019728 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026842 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 2 ? ? ? A . n A 1 2 GLU 2 3 ? ? ? A . n A 1 3 GLN 3 4 ? ? ? A . n A 1 4 ARG 4 5 ? ? ? A . n A 1 5 GLU 5 6 ? ? ? A . n A 1 6 THR 6 7 ? ? ? A . n A 1 7 ILE 7 8 ? ? ? A . n A 1 8 MSE 8 9 ? ? ? A . n A 1 9 LEU 9 10 ? ? ? A . n A 1 10 PRO 10 11 11 PRO PRO A . n A 1 11 GLY 11 12 12 GLY GLY A . n A 1 12 SER 12 13 13 SER SER A . n A 1 13 ASP 13 14 14 ASP ASP A . n A 1 14 TYR 14 15 15 TYR TYR A . n A 1 15 ASN 15 16 16 ASN ASN A . n A 1 16 HIS 16 17 17 HIS HIS A . n A 1 17 TRP 17 18 18 TRP TRP A . n A 1 18 LEU 18 19 19 LEU LEU A . n A 1 19 ILE 19 20 20 ILE ILE A . n A 1 20 VAL 20 21 21 VAL VAL A . n A 1 21 MSE 21 22 22 MSE MSE A . n A 1 22 GLU 22 23 23 GLU GLU A . n A 1 23 PHE 23 24 24 PHE PHE A . n A 1 24 PRO 24 25 25 PRO PRO A . n A 1 25 LYS 25 26 26 LYS LYS A . n A 1 26 ASP 26 27 27 ASP ASP A . n A 1 27 PRO 27 28 28 PRO PRO A . n A 1 28 ALA 28 29 29 ALA ALA A . n A 1 29 PRO 29 30 30 PRO PRO A . n A 1 30 SER 30 31 31 SER SER A . n A 1 31 ARG 31 32 32 ARG ARG A . n A 1 32 ASP 32 33 33 ASP ASP A . n A 1 33 GLN 33 34 34 GLN GLN A . n A 1 34 MSE 34 35 35 MSE MSE A . n A 1 35 ILE 35 36 36 ILE ILE A . n A 1 36 ASP 36 37 37 ASP ASP A . n A 1 37 THR 37 38 38 THR THR A . n A 1 38 TYR 38 39 39 TYR TYR A . n A 1 39 LEU 39 40 40 LEU LEU A . n A 1 40 ASN 40 41 41 ASN ASN A . n A 1 41 THR 41 42 42 THR THR A . n A 1 42 LEU 42 43 43 LEU LEU A . n A 1 43 ALA 43 44 44 ALA ALA A . n A 1 44 THR 44 45 45 THR THR A . n A 1 45 VAL 45 46 46 VAL VAL A . n A 1 46 LEU 46 47 47 LEU LEU A . n A 1 47 GLY 47 48 48 GLY GLY A . n A 1 48 SER 48 49 49 SER SER A . n A 1 49 MSE 49 50 50 MSE MSE A . n A 1 50 GLU 50 51 51 GLU GLU A . n A 1 51 GLU 51 52 52 GLU GLU A . n A 1 52 ALA 52 53 53 ALA ALA A . n A 1 53 LYS 53 54 54 LYS LYS A . n A 1 54 LYS 54 55 55 LYS LYS A . n A 1 55 ASN 55 56 56 ASN ASN A . n A 1 56 MSE 56 57 57 MSE MSE A . n A 1 57 TYR 57 58 58 TYR TYR A . n A 1 58 ALA 58 59 59 ALA ALA A . n A 1 59 PHE 59 60 60 PHE PHE A . n A 1 60 SER 60 61 61 SER SER A . n A 1 61 THR 61 62 62 THR THR A . n A 1 62 THR 62 63 63 THR THR A . n A 1 63 THR 63 64 64 THR THR A . n A 1 64 TYR 64 65 65 TYR TYR A . n A 1 65 THR 65 66 66 THR THR A . n A 1 66 GLY 66 67 67 GLY GLY A . n A 1 67 PHE 67 68 68 PHE PHE A . n A 1 68 GLN 68 69 69 GLN GLN A . n A 1 69 CYS 69 70 70 CYS CYS A . n A 1 70 THR 70 71 71 THR THR A . n A 1 71 ILE 71 72 72 ILE ILE A . n A 1 72 ASP 72 73 73 ASP ASP A . n A 1 73 GLU 73 74 74 GLU GLU A . n A 1 74 GLU 74 75 75 GLU GLU A . n A 1 75 THR 75 76 76 THR THR A . n A 1 76 SER 76 77 77 SER SER A . n A 1 77 GLU 77 78 78 GLU GLU A . n A 1 78 LYS 78 79 79 LYS LYS A . n A 1 79 PHE 79 80 80 PHE PHE A . n A 1 80 LYS 80 81 81 LYS LYS A . n A 1 81 GLY 81 82 82 GLY GLY A . n A 1 82 LEU 82 83 83 LEU LEU A . n A 1 83 PRO 83 84 84 PRO PRO A . n A 1 84 GLY 84 85 85 GLY GLY A . n A 1 85 VAL 85 86 86 VAL VAL A . n A 1 86 LEU 86 87 87 LEU LEU A . n A 1 87 TRP 87 88 88 TRP TRP A . n A 1 88 VAL 88 89 89 VAL VAL A . n A 1 89 LEU 89 90 90 LEU LEU A . n A 1 90 PRO 90 91 91 PRO PRO A . n A 1 91 ASP 91 92 92 ASP ASP A . n A 1 92 SER 92 93 93 SER SER A . n A 1 93 TYR 93 94 94 TYR TYR A . n A 1 94 ILE 94 95 95 ILE ILE A . n A 1 95 ASP 95 96 96 ASP ASP A . n A 1 96 VAL 96 97 97 VAL VAL A . n A 1 97 LYS 97 98 98 LYS LYS A . n A 1 98 ASN 98 99 99 ASN ASN A . n A 1 99 LYS 99 100 100 LYS LYS A . n A 1 100 ASP 100 101 101 ASP ASP A . n A 1 101 TYR 101 102 102 TYR TYR A . n A 1 102 GLY 102 103 103 GLY GLY A . n A 1 103 GLY 103 104 104 GLY GLY A . n A 1 104 ASP 104 105 105 ASP ASP A . n A 1 105 LYS 105 106 106 LYS LYS A . n A 1 106 TYR 106 107 107 TYR TYR A . n A 1 107 ILE 107 108 108 ILE ILE A . n A 1 108 ASN 108 109 109 ASN ASN A . n A 1 109 GLY 109 110 110 GLY GLY A . n A 1 110 GLU 110 111 111 GLU GLU A . n A 1 111 ILE 111 112 112 ILE ILE A . n A 1 112 ILE 112 113 113 ILE ILE A . n A 1 113 PRO 113 114 114 PRO PRO A . n A 1 114 SER 114 115 115 SER SER A . n A 1 115 THR 115 116 116 THR THR A . n A 1 116 TYR 116 117 117 TYR TYR A . n A 1 117 PRO 117 118 118 PRO PRO A . n A 1 118 THR 118 119 119 THR THR A . n A 1 119 TYR 119 120 120 TYR TYR A . n A 1 120 GLN 120 121 121 GLN GLN A . n A 1 121 PRO 121 122 122 PRO PRO A . n A 1 122 LYS 122 123 123 LYS LYS A . n A 1 123 GLN 123 124 124 GLN GLN A . n A 1 124 LEU 124 125 125 LEU LEU A . n A 1 125 GLU 125 126 126 GLU GLU A . n A 1 126 HIS 126 127 127 HIS HIS A . n A 1 127 HIS 127 128 128 HIS HIS A . n A 1 128 HIS 128 129 129 HIS HIS A . n A 1 129 HIS 129 130 130 HIS HIS A . n A 1 130 HIS 130 131 131 HIS HIS A . n A 1 131 HIS 131 132 132 HIS HIS A . n A 1 132 HIS 132 133 ? ? ? A . n A 1 133 HIS 133 134 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 201 1 HOH HOH A . B 2 HOH 2 202 17 HOH HOH A . B 2 HOH 3 203 24 HOH HOH A . B 2 HOH 4 204 18 HOH HOH A . B 2 HOH 5 205 29 HOH HOH A . B 2 HOH 6 206 6 HOH HOH A . B 2 HOH 7 207 34 HOH HOH A . B 2 HOH 8 208 40 HOH HOH A . B 2 HOH 9 209 47 HOH HOH A . B 2 HOH 10 210 8 HOH HOH A . B 2 HOH 11 211 2 HOH HOH A . B 2 HOH 12 212 49 HOH HOH A . B 2 HOH 13 213 13 HOH HOH A . B 2 HOH 14 214 38 HOH HOH A . B 2 HOH 15 215 28 HOH HOH A . B 2 HOH 16 216 20 HOH HOH A . B 2 HOH 17 217 3 HOH HOH A . B 2 HOH 18 218 25 HOH HOH A . B 2 HOH 19 219 11 HOH HOH A . B 2 HOH 20 220 21 HOH HOH A . B 2 HOH 21 221 33 HOH HOH A . B 2 HOH 22 222 15 HOH HOH A . B 2 HOH 23 223 44 HOH HOH A . B 2 HOH 24 224 7 HOH HOH A . B 2 HOH 25 225 10 HOH HOH A . B 2 HOH 26 226 23 HOH HOH A . B 2 HOH 27 227 52 HOH HOH A . B 2 HOH 28 228 26 HOH HOH A . B 2 HOH 29 229 39 HOH HOH A . B 2 HOH 30 230 12 HOH HOH A . B 2 HOH 31 231 4 HOH HOH A . B 2 HOH 32 232 37 HOH HOH A . B 2 HOH 33 233 19 HOH HOH A . B 2 HOH 34 234 35 HOH HOH A . B 2 HOH 35 235 22 HOH HOH A . B 2 HOH 36 236 42 HOH HOH A . B 2 HOH 37 237 16 HOH HOH A . B 2 HOH 38 238 14 HOH HOH A . B 2 HOH 39 239 48 HOH HOH A . B 2 HOH 40 240 27 HOH HOH A . B 2 HOH 41 241 9 HOH HOH A . B 2 HOH 42 242 5 HOH HOH A . B 2 HOH 43 243 32 HOH HOH A . B 2 HOH 44 244 36 HOH HOH A . B 2 HOH 45 245 51 HOH HOH A . B 2 HOH 46 246 31 HOH HOH A . B 2 HOH 47 247 43 HOH HOH A . B 2 HOH 48 248 46 HOH HOH A . B 2 HOH 49 249 41 HOH HOH A . B 2 HOH 50 250 50 HOH HOH A . B 2 HOH 51 251 30 HOH HOH A . B 2 HOH 52 252 53 HOH HOH A . B 2 HOH 53 253 45 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 21 A MSE 22 ? MET 'modified residue' 2 A MSE 34 A MSE 35 ? MET 'modified residue' 3 A MSE 49 A MSE 50 ? MET 'modified residue' 4 A MSE 56 A MSE 57 ? MET 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 7570 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2017-05-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 10.8742 _pdbx_refine_tls.origin_y 35.2392 _pdbx_refine_tls.origin_z 12.4412 _pdbx_refine_tls.T[1][1] 0.2217 _pdbx_refine_tls.T[2][2] 0.2173 _pdbx_refine_tls.T[3][3] 0.2366 _pdbx_refine_tls.T[1][2] 0.0145 _pdbx_refine_tls.T[1][3] 0.0235 _pdbx_refine_tls.T[2][3] 0.0265 _pdbx_refine_tls.L[1][1] 0.2657 _pdbx_refine_tls.L[2][2] 0.4238 _pdbx_refine_tls.L[3][3] 0.4681 _pdbx_refine_tls.L[1][2] -0.2868 _pdbx_refine_tls.L[1][3] 0.2315 _pdbx_refine_tls.L[2][3] -0.0862 _pdbx_refine_tls.S[1][1] 0.0250 _pdbx_refine_tls.S[1][2] 0.0866 _pdbx_refine_tls.S[1][3] 0.0679 _pdbx_refine_tls.S[2][1] -0.0479 _pdbx_refine_tls.S[2][2] -0.1324 _pdbx_refine_tls.S[2][3] -0.0349 _pdbx_refine_tls.S[3][1] -0.0085 _pdbx_refine_tls.S[3][2] 0.0372 _pdbx_refine_tls.S[3][3] -0.0000 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.10.1_2155: ???)' 1 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXDE ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 226 ? ? O A HOH 232 ? ? 1.90 2 1 O A HOH 242 ? ? O A HOH 246 ? ? 1.95 3 1 O A HOH 212 ? ? O A HOH 247 ? ? 1.99 4 1 O A TYR 102 ? ? O A HOH 201 ? ? 2.10 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 27 ? ? -7.22 -98.30 2 1 THR A 63 ? ? -128.73 -76.33 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS 130 ? CG ? A HIS 129 CG 2 1 Y 1 A HIS 130 ? ND1 ? A HIS 129 ND1 3 1 Y 1 A HIS 130 ? CD2 ? A HIS 129 CD2 4 1 Y 1 A HIS 130 ? CE1 ? A HIS 129 CE1 5 1 Y 1 A HIS 130 ? NE2 ? A HIS 129 NE2 6 1 Y 1 A HIS 131 ? CG ? A HIS 130 CG 7 1 Y 1 A HIS 131 ? ND1 ? A HIS 130 ND1 8 1 Y 1 A HIS 131 ? CD2 ? A HIS 130 CD2 9 1 Y 1 A HIS 131 ? CE1 ? A HIS 130 CE1 10 1 Y 1 A HIS 131 ? NE2 ? A HIS 130 NE2 11 1 Y 1 A HIS 132 ? CG ? A HIS 131 CG 12 1 Y 1 A HIS 132 ? ND1 ? A HIS 131 ND1 13 1 Y 1 A HIS 132 ? CD2 ? A HIS 131 CD2 14 1 Y 1 A HIS 132 ? CE1 ? A HIS 131 CE1 15 1 Y 1 A HIS 132 ? NE2 ? A HIS 131 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 2 ? A MSE 1 2 1 Y 1 A GLU 3 ? A GLU 2 3 1 Y 1 A GLN 4 ? A GLN 3 4 1 Y 1 A ARG 5 ? A ARG 4 5 1 Y 1 A GLU 6 ? A GLU 5 6 1 Y 1 A THR 7 ? A THR 6 7 1 Y 1 A ILE 8 ? A ILE 7 8 1 Y 1 A MSE 9 ? A MSE 8 9 1 Y 1 A LEU 10 ? A LEU 9 10 1 Y 1 A HIS 133 ? A HIS 132 11 1 Y 1 A HIS 134 ? A HIS 133 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #