data_5HNJ # _entry.id 5HNJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5HNJ pdb_00005hnj 10.2210/pdb5hnj/pdb WWPDB D_1000217344 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 5HNQ _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5HNJ _pdbx_database_status.recvd_initial_deposition_date 2016-01-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Luo, Z.P.' 1 'Sheng, J.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 44 _citation.language ? _citation.page_first 4968 _citation.page_last 4977 _citation.title 'Base pairing and structural insights into the 5-formylcytosine in RNA duplex.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkw235 _citation.pdbx_database_id_PubMed 27079978 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, R.' 1 ? primary 'Luo, Z.' 2 ? primary 'He, K.' 3 ? primary 'Delaney, M.O.' 4 ? primary 'Chen, D.' 5 ? primary 'Sheng, J.' 6 ? # _cell.entry_id 5HNJ _cell.length_a 30.692 _cell.length_b 45.923 _cell.length_c 45.406 _cell.angle_alpha 90.00 _cell.angle_beta 100.85 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HNJ _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(*GP*UP*AP*(OFC)P*GP*UP*AP*C)-3') ; 2554.571 6 ? ? ? ? 2 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 3 water nat water 18.015 251 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'GUA(RSQ)GUAC' _entity_poly.pdbx_seq_one_letter_code_can GUAXGUAC _entity_poly.pdbx_strand_id A,B,C,D,E,F _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 U n 1 3 A n 1 4 RSQ n 1 5 G n 1 6 U n 1 7 A n 1 8 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 8 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5HNJ _struct_ref.pdbx_db_accession 5HNJ _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5HNJ A 1 ? 8 ? 5HNJ 1 ? 8 ? 1 8 2 1 5HNJ B 1 ? 8 ? 5HNJ 1 ? 8 ? 1 8 3 1 5HNJ C 1 ? 8 ? 5HNJ 1 ? 8 ? 1 8 4 1 5HNJ D 1 ? 8 ? 5HNJ 1 ? 8 ? 1 8 5 1 5HNJ E 1 ? 8 ? 5HNJ 1 ? 8 ? 1 8 6 1 5HNJ F 1 ? 8 ? 5HNJ 1 ? 8 ? 1 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 RSQ 'RNA linking' n ;5-formylcytidine 5'-(dihydrogen phosphate) ; ? 'C10 H14 N3 O9 P' 351.207 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5HNJ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.05 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 40.01 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '50 mM HEPES Na (pH 7.0), 50 mM MgSO4, 1.6 M Li2SO4' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-10-28 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-BM' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-BM _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5HNJ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.24 _reflns.d_resolution_low 30.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 35304 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.2 _reflns.pdbx_Rmerge_I_obs 0.050 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 35.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.24 _reflns_shell.d_res_low 1.28 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.92 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 5.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5HNJ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 33515 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.20 _refine.ls_d_res_high 1.24 _refine.ls_percent_reflns_obs 99.88 _refine.ls_R_factor_obs 0.13454 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.13351 _refine.ls_R_factor_R_free 0.15451 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1770 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.984 _refine.correlation_coeff_Fo_to_Fc_free 0.979 _refine.B_iso_mean 18.582 _refine.aniso_B[1][1] 0.34 _refine.aniso_B[2][2] -1.02 _refine.aniso_B[3][3] 0.68 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.23 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 197D _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.009 _refine.pdbx_overall_ESU_R_Free 0.008 _refine.overall_SU_ML 0.017 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 0.811 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1014 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 251 _refine_hist.number_atoms_total 1267 _refine_hist.d_res_high 1.24 _refine_hist.d_res_low 25.20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.020 0.012 ? 1140 'X-RAY DIFFRACTION' ? r_bond_other_d 0.004 0.020 ? 474 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.195 1.462 ? 1746 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.940 3.000 ? 1146 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.101 0.200 ? 192 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.033 0.020 ? 576 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.010 0.020 ? 246 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.844 3.472 ? 1140 'X-RAY DIFFRACTION' ? r_scbond_other 3.847 3.471 ? 1139 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 5.248 6.550 ? 1746 'X-RAY DIFFRACTION' ? r_long_range_B_refined 4.713 16.705 ? 6588 'X-RAY DIFFRACTION' ? r_long_range_B_other 4.674 16.649 ? 6551 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 5.846 3.000 ? 1614 'X-RAY DIFFRACTION' ? r_sphericity_free 22.752 5.000 ? 2 'X-RAY DIFFRACTION' ? r_sphericity_bonded 12.888 5.000 ? 1742 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.239 _refine_ls_shell.d_res_low 1.271 _refine_ls_shell.number_reflns_R_work 2415 _refine_ls_shell.R_factor_R_work 0.224 _refine_ls_shell.percent_reflns_obs 98.45 _refine_ls_shell.R_factor_R_free 0.278 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 119 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 5HNJ _struct.title 'Base Pairing and Structure Insights into the 5-Formylcytosine in RNA Duplex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5HNJ _struct_keywords.text 'RNA, 5-formylcytosine' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 2 ? H N N 2 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A A 3 "O3'" ? ? ? 1_555 A RSQ 4 P ? ? A A 3 A RSQ 4 1_555 ? ? ? ? ? ? ? 1.595 ? ? covale2 covale one ? A RSQ 4 "O3'" ? ? ? 1_555 A G 5 P ? ? A RSQ 4 A G 5 1_555 ? ? ? ? ? ? ? 1.620 ? ? covale3 covale both ? B A 3 "O3'" ? ? ? 1_555 B RSQ 4 P ? ? B A 3 B RSQ 4 1_555 ? ? ? ? ? ? ? 1.546 ? ? covale4 covale one ? B RSQ 4 "O3'" ? ? ? 1_555 B G 5 P ? ? B RSQ 4 B G 5 1_555 ? ? ? ? ? ? ? 1.573 ? ? covale5 covale both ? C A 3 "O3'" ? ? ? 1_555 C RSQ 4 P ? ? C A 3 C RSQ 4 1_555 ? ? ? ? ? ? ? 1.623 ? ? covale6 covale one ? C RSQ 4 "O3'" ? ? ? 1_555 C G 5 P ? ? C RSQ 4 C G 5 1_555 ? ? ? ? ? ? ? 1.589 ? ? covale7 covale both ? D A 3 "O3'" ? ? ? 1_555 D RSQ 4 P ? ? D A 3 D RSQ 4 1_555 ? ? ? ? ? ? ? 1.592 ? ? covale8 covale one ? D RSQ 4 "O3'" ? ? ? 1_555 D G 5 P ? ? D RSQ 4 D G 5 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale9 covale both ? E A 3 "O3'" ? ? ? 1_555 E RSQ 4 P ? ? E A 3 E RSQ 4 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale10 covale one ? E RSQ 4 "O3'" ? ? ? 1_555 E G 5 P ? ? E RSQ 4 E G 5 1_555 ? ? ? ? ? ? ? 1.512 ? ? covale11 covale both ? F A 3 "O3'" ? ? ? 1_555 F RSQ 4 P ? ? F A 3 F RSQ 4 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale12 covale one ? F RSQ 4 "O3'" ? ? ? 1_555 F G 5 P ? ? F RSQ 4 F G 5 1_555 ? ? ? ? ? ? ? 1.610 ? ? metalc1 metalc ? ? G NA . NA ? ? ? 1_555 I HOH . O ? ? A NA 101 A HOH 236 1_555 ? ? ? ? ? ? ? 2.119 ? ? metalc2 metalc ? ? G NA . NA ? ? ? 1_555 K HOH . O ? ? A NA 101 C HOH 112 1_555 ? ? ? ? ? ? ? 2.148 ? ? metalc3 metalc ? ? G NA . NA ? ? ? 1_555 K HOH . O ? ? A NA 101 C HOH 115 1_555 ? ? ? ? ? ? ? 2.079 ? ? metalc4 metalc ? ? G NA . NA ? ? ? 1_555 K HOH . O ? ? A NA 101 C HOH 117 1_555 ? ? ? ? ? ? ? 2.076 ? ? metalc5 metalc ? ? G NA . NA ? ? ? 1_555 K HOH . O ? ? A NA 101 C HOH 139 1_555 ? ? ? ? ? ? ? 2.123 ? ? metalc6 metalc ? ? G NA . NA ? ? ? 1_555 L HOH . O ? ? A NA 101 D HOH 142 1_555 ? ? ? ? ? ? ? 2.075 ? ? metalc7 metalc ? ? I HOH . O ? ? ? 1_555 H NA . NA ? ? A HOH 235 B NA 101 1_555 ? ? ? ? ? ? ? 2.273 ? ? metalc8 metalc ? ? I HOH . O ? ? ? 1_555 H NA . NA ? ? A HOH 241 B NA 101 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc9 metalc ? ? H NA . NA ? ? ? 1_555 J HOH . O ? ? B NA 101 B HOH 205 1_555 ? ? ? ? ? ? ? 2.145 ? ? metalc10 metalc ? ? H NA . NA ? ? ? 1_555 J HOH . O ? ? B NA 101 B HOH 211 1_555 ? ? ? ? ? ? ? 2.138 ? ? metalc11 metalc ? ? H NA . NA ? ? ? 1_555 J HOH . O ? ? B NA 101 B HOH 215 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc12 metalc ? ? H NA . NA ? ? ? 1_555 L HOH . O ? ? B NA 101 D HOH 135 1_555 ? ? ? ? ? ? ? 2.409 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 B C 8 N3 ? ? A G 1 B C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 B C 8 O2 ? ? A G 1 B C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 B C 8 N4 ? ? A G 1 B C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A U 2 N3 ? ? ? 1_555 B A 7 N1 ? ? A U 2 B A 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A U 2 O4 ? ? ? 1_555 B A 7 N6 ? ? A U 2 B A 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A A 3 N1 ? ? ? 1_555 B U 6 N3 ? ? A A 3 B U 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A A 3 N6 ? ? ? 1_555 B U 6 O4 ? ? A A 3 B U 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A RSQ 4 N3 ? ? ? 1_555 B G 5 N1 ? ? A RSQ 4 B G 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A RSQ 4 N4 ? ? ? 1_555 B G 5 O6 ? ? A RSQ 4 B G 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A RSQ 4 O2 ? ? ? 1_555 B G 5 N2 ? ? A RSQ 4 B G 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 5 N1 ? ? ? 1_555 B RSQ 4 N3 ? ? A G 5 B RSQ 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 N2 ? ? ? 1_555 B RSQ 4 O2 ? ? A G 5 B RSQ 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 O6 ? ? ? 1_555 B RSQ 4 N4 ? ? A G 5 B RSQ 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A U 6 N3 ? ? ? 1_555 B A 3 N1 ? ? A U 6 B A 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A U 6 O4 ? ? ? 1_555 B A 3 N6 ? ? A U 6 B A 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A A 7 N1 ? ? ? 1_555 B U 2 N3 ? ? A A 7 B U 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A A 7 N6 ? ? ? 1_555 B U 2 O4 ? ? A A 7 B U 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 8 N3 ? ? ? 1_555 B G 1 N1 ? ? A C 8 B G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 8 N4 ? ? ? 1_555 B G 1 O6 ? ? A C 8 B G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 8 O2 ? ? ? 1_555 B G 1 N2 ? ? A C 8 B G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C G 1 N1 ? ? ? 1_555 D C 8 N3 ? ? C G 1 D C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C G 1 N2 ? ? ? 1_555 D C 8 O2 ? ? C G 1 D C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C G 1 O6 ? ? ? 1_555 D C 8 N4 ? ? C G 1 D C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C U 2 N3 ? ? ? 1_555 D A 7 N1 ? ? C U 2 D A 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C U 2 O4 ? ? ? 1_555 D A 7 N6 ? ? C U 2 D A 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C A 3 N1 ? ? ? 1_555 D U 6 N3 ? ? C A 3 D U 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C A 3 N6 ? ? ? 1_555 D U 6 O4 ? ? C A 3 D U 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C RSQ 4 N3 ? ? ? 1_555 D G 5 N1 ? ? C RSQ 4 D G 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C RSQ 4 N4 ? ? ? 1_555 D G 5 O6 ? ? C RSQ 4 D G 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C RSQ 4 O2 ? ? ? 1_555 D G 5 N2 ? ? C RSQ 4 D G 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C G 5 N1 ? ? ? 1_555 D RSQ 4 N3 ? ? C G 5 D RSQ 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C G 5 N2 ? ? ? 1_555 D RSQ 4 O2 ? ? C G 5 D RSQ 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C G 5 O6 ? ? ? 1_555 D RSQ 4 N4 ? ? C G 5 D RSQ 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C U 6 N3 ? ? ? 1_555 D A 3 N1 ? ? C U 6 D A 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C U 6 O4 ? ? ? 1_555 D A 3 N6 ? ? C U 6 D A 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C A 7 N1 ? ? ? 1_555 D U 2 N3 ? ? C A 7 D U 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C A 7 N6 ? ? ? 1_555 D U 2 O4 ? ? C A 7 D U 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C C 8 N3 ? ? ? 1_555 D G 1 N1 ? ? C C 8 D G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C C 8 N4 ? ? ? 1_555 D G 1 O6 ? ? C C 8 D G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C C 8 O2 ? ? ? 1_555 D G 1 N2 ? ? C C 8 D G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? E G 1 N1 ? ? ? 1_555 F C 8 N3 ? ? E G 1 F C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? E G 1 N2 ? ? ? 1_555 F C 8 O2 ? ? E G 1 F C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? E G 1 O6 ? ? ? 1_555 F C 8 N4 ? ? E G 1 F C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? E U 2 N3 ? ? ? 1_555 F A 7 N1 ? ? E U 2 F A 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? E U 2 O4 ? ? ? 1_555 F A 7 N6 ? ? E U 2 F A 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? E A 3 N1 ? ? ? 1_555 F U 6 N3 ? ? E A 3 F U 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? E A 3 N6 ? ? ? 1_555 F U 6 O4 ? ? E A 3 F U 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? E RSQ 4 N3 ? ? ? 1_555 F G 5 N1 ? ? E RSQ 4 F G 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? E RSQ 4 N4 ? ? ? 1_555 F G 5 O6 ? ? E RSQ 4 F G 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? E RSQ 4 O2 ? ? ? 1_555 F G 5 N2 ? ? E RSQ 4 F G 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? E G 5 N1 ? ? ? 1_555 F RSQ 4 N3 ? ? E G 5 F RSQ 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? E G 5 N2 ? ? ? 1_555 F RSQ 4 O2 ? ? E G 5 F RSQ 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? E G 5 O6 ? ? ? 1_555 F RSQ 4 N4 ? ? E G 5 F RSQ 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? E U 6 N3 ? ? ? 1_555 F A 3 N1 ? ? E U 6 F A 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? E U 6 O4 ? ? ? 1_555 F A 3 N6 ? ? E U 6 F A 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? E A 7 N1 ? ? ? 1_555 F U 2 N3 ? ? E A 7 F U 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? E A 7 N6 ? ? ? 1_555 F U 2 O4 ? ? E A 7 F U 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? E C 8 N3 ? ? ? 1_555 F G 1 N1 ? ? E C 8 F G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? E C 8 N4 ? ? ? 1_555 F G 1 O6 ? ? E C 8 F G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? E C 8 O2 ? ? ? 1_555 F G 1 N2 ? ? E C 8 F G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NA 101 ? 6 'binding site for residue NA A 101' AC2 Software B NA 101 ? 6 'binding site for residue NA B 101' AC3 Software B A 3 ? 19 'binding site for Di-nucleotide A B 3 and RSQ B 4' AC4 Software B RSQ 4 ? 19 'binding site for Di-nucleotide RSQ B 4 and G B 5' AC5 Software C A 3 ? 15 'binding site for Di-nucleotide A C 3 and RSQ C 4' AC6 Software C RSQ 4 ? 17 'binding site for Di-nucleotide RSQ C 4 and G C 5' AC7 Software D A 3 ? 13 'binding site for Di-nucleotide A D 3 and RSQ D 4' AC8 Software D RSQ 4 ? 15 'binding site for Di-nucleotide RSQ D 4 and G D 5' AC9 Software E A 3 ? 17 'binding site for Di-nucleotide A E 3 and RSQ E 4' AD1 Software E RSQ 4 ? 18 'binding site for Di-nucleotide RSQ E 4 and G E 5' AD2 Software F A 3 ? 18 'binding site for Di-nucleotide A F 3 and RSQ F 4' AD3 Software F RSQ 4 ? 16 'binding site for Di-nucleotide RSQ F 4 and G F 5' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HOH I . ? HOH A 236 . ? 1_555 ? 2 AC1 6 HOH K . ? HOH C 112 . ? 1_555 ? 3 AC1 6 HOH K . ? HOH C 115 . ? 1_555 ? 4 AC1 6 HOH K . ? HOH C 117 . ? 1_555 ? 5 AC1 6 HOH K . ? HOH C 139 . ? 1_555 ? 6 AC1 6 HOH L . ? HOH D 142 . ? 1_555 ? 7 AC2 6 HOH I . ? HOH A 235 . ? 1_555 ? 8 AC2 6 HOH I . ? HOH A 241 . ? 1_555 ? 9 AC2 6 HOH J . ? HOH B 205 . ? 1_555 ? 10 AC2 6 HOH J . ? HOH B 211 . ? 1_555 ? 11 AC2 6 HOH J . ? HOH B 215 . ? 1_555 ? 12 AC2 6 HOH L . ? HOH D 135 . ? 1_555 ? 13 AC3 19 G A 5 ? G A 5 . ? 1_555 ? 14 AC3 19 U A 6 ? U A 6 . ? 1_555 ? 15 AC3 19 A A 7 ? A A 7 . ? 1_555 ? 16 AC3 19 U B 2 ? U B 2 . ? 1_555 ? 17 AC3 19 G B 5 ? G B 5 . ? 1_555 ? 18 AC3 19 HOH J . ? HOH B 201 . ? 1_555 ? 19 AC3 19 HOH J . ? HOH B 202 . ? 1_555 ? 20 AC3 19 HOH J . ? HOH B 204 . ? 1_555 ? 21 AC3 19 HOH J . ? HOH B 210 . ? 1_555 ? 22 AC3 19 HOH J . ? HOH B 214 . ? 1_555 ? 23 AC3 19 HOH J . ? HOH B 217 . ? 1_555 ? 24 AC3 19 HOH J . ? HOH B 219 . ? 1_555 ? 25 AC3 19 HOH J . ? HOH B 224 . ? 1_555 ? 26 AC3 19 HOH J . ? HOH B 225 . ? 1_555 ? 27 AC3 19 A F 3 ? A F 3 . ? 1_554 ? 28 AC3 19 HOH N . ? HOH F 102 . ? 1_554 ? 29 AC3 19 HOH N . ? HOH F 112 . ? 1_554 ? 30 AC3 19 HOH N . ? HOH F 128 . ? 1_554 ? 31 AC3 19 HOH N . ? HOH F 143 . ? 1_554 ? 32 AC4 19 A A 3 ? A A 3 . ? 1_555 ? 33 AC4 19 RSQ A 4 ? RSQ A 4 . ? 1_555 ? 34 AC4 19 G A 5 ? G A 5 . ? 1_555 ? 35 AC4 19 U A 6 ? U A 6 . ? 1_555 ? 36 AC4 19 A B 3 ? A B 3 . ? 1_555 ? 37 AC4 19 U B 6 ? U B 6 . ? 1_555 ? 38 AC4 19 HOH J . ? HOH B 201 . ? 1_555 ? 39 AC4 19 HOH J . ? HOH B 206 . ? 1_555 ? 40 AC4 19 HOH J . ? HOH B 212 . ? 1_555 ? 41 AC4 19 HOH J . ? HOH B 217 . ? 1_555 ? 42 AC4 19 HOH J . ? HOH B 218 . ? 1_555 ? 43 AC4 19 HOH J . ? HOH B 221 . ? 1_555 ? 44 AC4 19 HOH J . ? HOH B 222 . ? 1_555 ? 45 AC4 19 HOH J . ? HOH B 224 . ? 1_555 ? 46 AC4 19 HOH J . ? HOH B 229 . ? 1_555 ? 47 AC4 19 A F 3 ? A F 3 . ? 1_554 ? 48 AC4 19 HOH N . ? HOH F 102 . ? 1_554 ? 49 AC4 19 HOH N . ? HOH F 128 . ? 1_554 ? 50 AC4 19 HOH N . ? HOH F 143 . ? 1_554 ? 51 AC5 15 U C 2 ? U C 2 . ? 1_555 ? 52 AC5 15 G C 5 ? G C 5 . ? 1_555 ? 53 AC5 15 HOH K . ? HOH C 101 . ? 1_555 ? 54 AC5 15 HOH K . ? HOH C 103 . ? 1_555 ? 55 AC5 15 HOH K . ? HOH C 107 . ? 1_555 ? 56 AC5 15 HOH K . ? HOH C 113 . ? 1_555 ? 57 AC5 15 HOH K . ? HOH C 114 . ? 1_555 ? 58 AC5 15 HOH K . ? HOH C 122 . ? 1_555 ? 59 AC5 15 HOH K . ? HOH C 126 . ? 1_555 ? 60 AC5 15 HOH K . ? HOH C 128 . ? 1_555 ? 61 AC5 15 HOH K . ? HOH C 131 . ? 1_555 ? 62 AC5 15 G D 5 ? G D 5 . ? 1_555 ? 63 AC5 15 U D 6 ? U D 6 . ? 1_555 ? 64 AC5 15 A D 7 ? A D 7 . ? 1_555 ? 65 AC5 15 HOH M . ? HOH E 118 . ? 1_655 ? 66 AC6 17 A C 3 ? A C 3 . ? 1_555 ? 67 AC6 17 U C 6 ? U C 6 . ? 1_555 ? 68 AC6 17 HOH K . ? HOH C 101 . ? 1_555 ? 69 AC6 17 HOH K . ? HOH C 107 . ? 1_555 ? 70 AC6 17 HOH K . ? HOH C 116 . ? 1_555 ? 71 AC6 17 HOH K . ? HOH C 120 . ? 1_555 ? 72 AC6 17 HOH K . ? HOH C 121 . ? 1_555 ? 73 AC6 17 HOH K . ? HOH C 123 . ? 1_555 ? 74 AC6 17 HOH K . ? HOH C 126 . ? 1_555 ? 75 AC6 17 HOH K . ? HOH C 127 . ? 1_555 ? 76 AC6 17 HOH K . ? HOH C 131 . ? 1_555 ? 77 AC6 17 A D 3 ? A D 3 . ? 1_555 ? 78 AC6 17 RSQ D 4 ? RSQ D 4 . ? 1_555 ? 79 AC6 17 G D 5 ? G D 5 . ? 1_555 ? 80 AC6 17 U D 6 ? U D 6 . ? 1_555 ? 81 AC6 17 HOH M . ? HOH E 118 . ? 1_655 ? 82 AC6 17 HOH M . ? HOH E 131 . ? 1_655 ? 83 AC7 13 G C 5 ? G C 5 . ? 1_555 ? 84 AC7 13 U C 6 ? U C 6 . ? 1_555 ? 85 AC7 13 A C 7 ? A C 7 . ? 1_555 ? 86 AC7 13 U D 2 ? U D 2 . ? 1_555 ? 87 AC7 13 G D 5 ? G D 5 . ? 1_555 ? 88 AC7 13 HOH L . ? HOH D 104 . ? 1_555 ? 89 AC7 13 HOH L . ? HOH D 116 . ? 1_555 ? 90 AC7 13 HOH L . ? HOH D 117 . ? 1_555 ? 91 AC7 13 HOH L . ? HOH D 118 . ? 1_555 ? 92 AC7 13 HOH L . ? HOH D 127 . ? 1_555 ? 93 AC7 13 HOH L . ? HOH D 128 . ? 1_555 ? 94 AC7 13 HOH L . ? HOH D 130 . ? 1_555 ? 95 AC7 13 HOH L . ? HOH D 136 . ? 1_555 ? 96 AC8 15 RSQ C 4 ? RSQ C 4 . ? 1_555 ? 97 AC8 15 G C 5 ? G C 5 . ? 1_555 ? 98 AC8 15 A D 3 ? A D 3 . ? 1_555 ? 99 AC8 15 U D 6 ? U D 6 . ? 1_555 ? 100 AC8 15 HOH L . ? HOH D 104 . ? 1_555 ? 101 AC8 15 HOH L . ? HOH D 105 . ? 1_555 ? 102 AC8 15 HOH L . ? HOH D 106 . ? 1_555 ? 103 AC8 15 HOH L . ? HOH D 109 . ? 1_555 ? 104 AC8 15 HOH L . ? HOH D 111 . ? 1_555 ? 105 AC8 15 HOH L . ? HOH D 119 . ? 1_555 ? 106 AC8 15 HOH L . ? HOH D 121 . ? 1_555 ? 107 AC8 15 HOH L . ? HOH D 127 . ? 1_555 ? 108 AC8 15 HOH L . ? HOH D 130 . ? 1_555 ? 109 AC8 15 HOH L . ? HOH D 133 . ? 1_555 ? 110 AC8 15 HOH L . ? HOH D 134 . ? 1_555 ? 111 AC9 17 U E 2 ? U E 2 . ? 1_555 ? 112 AC9 17 G E 5 ? G E 5 . ? 1_555 ? 113 AC9 17 HOH M . ? HOH E 102 . ? 1_555 ? 114 AC9 17 HOH M . ? HOH E 104 . ? 1_555 ? 115 AC9 17 HOH M . ? HOH E 111 . ? 1_555 ? 116 AC9 17 HOH M . ? HOH E 114 . ? 1_555 ? 117 AC9 17 HOH M . ? HOH E 118 . ? 1_555 ? 118 AC9 17 HOH M . ? HOH E 119 . ? 1_555 ? 119 AC9 17 HOH M . ? HOH E 131 . ? 1_555 ? 120 AC9 17 HOH M . ? HOH E 135 . ? 1_555 ? 121 AC9 17 HOH M . ? HOH E 136 . ? 1_555 ? 122 AC9 17 HOH M . ? HOH E 137 . ? 1_555 ? 123 AC9 17 G F 5 ? G F 5 . ? 1_555 ? 124 AC9 17 U F 6 ? U F 6 . ? 1_555 ? 125 AC9 17 A F 7 ? A F 7 . ? 1_555 ? 126 AC9 17 HOH N . ? HOH F 136 . ? 1_555 ? 127 AC9 17 HOH N . ? HOH F 144 . ? 1_555 ? 128 AD1 18 A E 3 ? A E 3 . ? 1_555 ? 129 AD1 18 U E 6 ? U E 6 . ? 1_555 ? 130 AD1 18 HOH M . ? HOH E 102 . ? 1_555 ? 131 AD1 18 HOH M . ? HOH E 104 . ? 1_555 ? 132 AD1 18 HOH M . ? HOH E 106 . ? 1_555 ? 133 AD1 18 HOH M . ? HOH E 119 . ? 1_555 ? 134 AD1 18 HOH M . ? HOH E 120 . ? 1_555 ? 135 AD1 18 HOH M . ? HOH E 121 . ? 1_555 ? 136 AD1 18 HOH M . ? HOH E 128 . ? 1_555 ? 137 AD1 18 HOH M . ? HOH E 131 . ? 1_555 ? 138 AD1 18 HOH M . ? HOH E 133 . ? 1_555 ? 139 AD1 18 HOH M . ? HOH E 136 . ? 1_555 ? 140 AD1 18 HOH M . ? HOH E 137 . ? 1_555 ? 141 AD1 18 A F 3 ? A F 3 . ? 1_555 ? 142 AD1 18 RSQ F 4 ? RSQ F 4 . ? 1_555 ? 143 AD1 18 G F 5 ? G F 5 . ? 1_555 ? 144 AD1 18 HOH N . ? HOH F 136 . ? 1_555 ? 145 AD1 18 HOH N . ? HOH F 144 . ? 1_555 ? 146 AD2 18 RSQ B 4 ? RSQ B 4 . ? 1_556 ? 147 AD2 18 G E 5 ? G E 5 . ? 1_555 ? 148 AD2 18 U E 6 ? U E 6 . ? 1_555 ? 149 AD2 18 A E 7 ? A E 7 . ? 1_555 ? 150 AD2 18 U F 2 ? U F 2 . ? 1_555 ? 151 AD2 18 G F 5 ? G F 5 . ? 1_555 ? 152 AD2 18 HOH N . ? HOH F 102 . ? 1_555 ? 153 AD2 18 HOH N . ? HOH F 103 . ? 1_555 ? 154 AD2 18 HOH N . ? HOH F 105 . ? 1_555 ? 155 AD2 18 HOH N . ? HOH F 106 . ? 1_555 ? 156 AD2 18 HOH N . ? HOH F 109 . ? 1_555 ? 157 AD2 18 HOH N . ? HOH F 112 . ? 1_555 ? 158 AD2 18 HOH N . ? HOH F 115 . ? 1_555 ? 159 AD2 18 HOH N . ? HOH F 123 . ? 1_555 ? 160 AD2 18 HOH N . ? HOH F 124 . ? 1_555 ? 161 AD2 18 HOH N . ? HOH F 130 . ? 1_555 ? 162 AD2 18 HOH N . ? HOH F 133 . ? 1_555 ? 163 AD2 18 HOH N . ? HOH F 135 . ? 1_555 ? 164 AD3 16 A E 3 ? A E 3 . ? 1_555 ? 165 AD3 16 RSQ E 4 ? RSQ E 4 . ? 1_555 ? 166 AD3 16 G E 5 ? G E 5 . ? 1_555 ? 167 AD3 16 A F 3 ? A F 3 . ? 1_555 ? 168 AD3 16 U F 6 ? U F 6 . ? 1_555 ? 169 AD3 16 HOH N . ? HOH F 104 . ? 1_555 ? 170 AD3 16 HOH N . ? HOH F 105 . ? 1_555 ? 171 AD3 16 HOH N . ? HOH F 106 . ? 1_555 ? 172 AD3 16 HOH N . ? HOH F 108 . ? 1_555 ? 173 AD3 16 HOH N . ? HOH F 109 . ? 1_555 ? 174 AD3 16 HOH N . ? HOH F 114 . ? 1_555 ? 175 AD3 16 HOH N . ? HOH F 126 . ? 1_555 ? 176 AD3 16 HOH N . ? HOH F 130 . ? 1_555 ? 177 AD3 16 HOH N . ? HOH F 134 . ? 1_555 ? 178 AD3 16 HOH N . ? HOH F 135 . ? 1_555 ? 179 AD3 16 HOH N . ? HOH F 142 . ? 1_555 ? # _atom_sites.entry_id 5HNJ _atom_sites.fract_transf_matrix[1][1] 0.032582 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006247 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021776 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022425 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 U 2 2 2 U U A . n A 1 3 A 3 3 3 A A A . n A 1 4 RSQ 4 4 4 RSQ RSQ A . n A 1 5 G 5 5 5 G G A . n A 1 6 U 6 6 6 U U A . n A 1 7 A 7 7 7 A A A . n A 1 8 C 8 8 8 C C A . n B 1 1 G 1 1 1 G G B . n B 1 2 U 2 2 2 U U B . n B 1 3 A 3 3 3 A A B . n B 1 4 RSQ 4 4 4 RSQ RSQ B . n B 1 5 G 5 5 5 G G B . n B 1 6 U 6 6 6 U U B . n B 1 7 A 7 7 7 A A B . n B 1 8 C 8 8 8 C C B . n C 1 1 G 1 1 1 G G C . n C 1 2 U 2 2 2 U U C . n C 1 3 A 3 3 3 A A C . n C 1 4 RSQ 4 4 4 RSQ RSQ C . n C 1 5 G 5 5 5 G G C . n C 1 6 U 6 6 6 U U C . n C 1 7 A 7 7 7 A A C . n C 1 8 C 8 8 8 C C C . n D 1 1 G 1 1 1 G G D . n D 1 2 U 2 2 2 U U D . n D 1 3 A 3 3 3 A A D . n D 1 4 RSQ 4 4 4 RSQ RSQ D . n D 1 5 G 5 5 5 G G D . n D 1 6 U 6 6 6 U U D . n D 1 7 A 7 7 7 A A D . n D 1 8 C 8 8 8 C C D . n E 1 1 G 1 1 1 G G E . n E 1 2 U 2 2 2 U U E . n E 1 3 A 3 3 3 A A E . n E 1 4 RSQ 4 4 4 RSQ RSQ E . n E 1 5 G 5 5 5 G G E . n E 1 6 U 6 6 6 U U E . n E 1 7 A 7 7 7 A A E . n E 1 8 C 8 8 8 C C E . n F 1 1 G 1 1 1 G G F . n F 1 2 U 2 2 2 U U F . n F 1 3 A 3 3 3 A A F . n F 1 4 RSQ 4 4 4 RSQ RSQ F . n F 1 5 G 5 5 5 G G F . n F 1 6 U 6 6 6 U U F . n F 1 7 A 7 7 7 A A F . n F 1 8 C 8 8 8 C C F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 NA 1 101 101 NA NA A . H 2 NA 1 101 101 NA NA B . I 3 HOH 1 201 201 HOH HOH A . I 3 HOH 2 202 203 HOH HOH A . I 3 HOH 3 203 202 HOH HOH A . I 3 HOH 4 204 205 HOH HOH A . I 3 HOH 5 205 204 HOH HOH A . I 3 HOH 6 206 206 HOH HOH A . I 3 HOH 7 207 209 HOH HOH A . I 3 HOH 8 208 208 HOH HOH A . I 3 HOH 9 209 210 HOH HOH A . I 3 HOH 10 210 213 HOH HOH A . I 3 HOH 11 211 207 HOH HOH A . I 3 HOH 12 212 211 HOH HOH A . I 3 HOH 13 213 212 HOH HOH A . I 3 HOH 14 214 214 HOH HOH A . I 3 HOH 15 215 215 HOH HOH A . I 3 HOH 16 216 217 HOH HOH A . I 3 HOH 17 217 221 HOH HOH A . I 3 HOH 18 218 219 HOH HOH A . I 3 HOH 19 219 220 HOH HOH A . I 3 HOH 20 220 218 HOH HOH A . I 3 HOH 21 221 216 HOH HOH A . I 3 HOH 22 222 223 HOH HOH A . I 3 HOH 23 223 224 HOH HOH A . I 3 HOH 24 224 222 HOH HOH A . I 3 HOH 25 225 225 HOH HOH A . I 3 HOH 26 226 226 HOH HOH A . I 3 HOH 27 227 227 HOH HOH A . I 3 HOH 28 228 229 HOH HOH A . I 3 HOH 29 229 228 HOH HOH A . I 3 HOH 30 230 230 HOH HOH A . I 3 HOH 31 231 231 HOH HOH A . I 3 HOH 32 232 233 HOH HOH A . I 3 HOH 33 233 232 HOH HOH A . I 3 HOH 34 234 234 HOH HOH A . I 3 HOH 35 235 235 HOH HOH A . I 3 HOH 36 236 236 HOH HOH A . I 3 HOH 37 237 238 HOH HOH A . I 3 HOH 38 238 239 HOH HOH A . I 3 HOH 39 239 240 HOH HOH A . I 3 HOH 40 240 241 HOH HOH A . I 3 HOH 41 241 242 HOH HOH A . I 3 HOH 42 242 243 HOH HOH A . I 3 HOH 43 243 244 HOH HOH A . I 3 HOH 44 244 245 HOH HOH A . J 3 HOH 1 201 201 HOH HOH B . J 3 HOH 2 202 202 HOH HOH B . J 3 HOH 3 203 203 HOH HOH B . J 3 HOH 4 204 204 HOH HOH B . J 3 HOH 5 205 205 HOH HOH B . J 3 HOH 6 206 206 HOH HOH B . J 3 HOH 7 207 207 HOH HOH B . J 3 HOH 8 208 209 HOH HOH B . J 3 HOH 9 209 208 HOH HOH B . J 3 HOH 10 210 210 HOH HOH B . J 3 HOH 11 211 214 HOH HOH B . J 3 HOH 12 212 213 HOH HOH B . J 3 HOH 13 213 211 HOH HOH B . J 3 HOH 14 214 215 HOH HOH B . J 3 HOH 15 215 216 HOH HOH B . J 3 HOH 16 216 212 HOH HOH B . J 3 HOH 17 217 217 HOH HOH B . J 3 HOH 18 218 219 HOH HOH B . J 3 HOH 19 219 218 HOH HOH B . J 3 HOH 20 220 220 HOH HOH B . J 3 HOH 21 221 221 HOH HOH B . J 3 HOH 22 222 222 HOH HOH B . J 3 HOH 23 223 223 HOH HOH B . J 3 HOH 24 224 226 HOH HOH B . J 3 HOH 25 225 224 HOH HOH B . J 3 HOH 26 226 234 HOH HOH B . J 3 HOH 27 227 227 HOH HOH B . J 3 HOH 28 228 229 HOH HOH B . J 3 HOH 29 229 228 HOH HOH B . J 3 HOH 30 230 230 HOH HOH B . J 3 HOH 31 231 231 HOH HOH B . J 3 HOH 32 232 232 HOH HOH B . J 3 HOH 33 233 233 HOH HOH B . J 3 HOH 34 234 235 HOH HOH B . J 3 HOH 35 235 236 HOH HOH B . K 3 HOH 1 101 101 HOH HOH C . K 3 HOH 2 102 102 HOH HOH C . K 3 HOH 3 103 103 HOH HOH C . K 3 HOH 4 104 104 HOH HOH C . K 3 HOH 5 105 106 HOH HOH C . K 3 HOH 6 106 108 HOH HOH C . K 3 HOH 7 107 105 HOH HOH C . K 3 HOH 8 108 107 HOH HOH C . K 3 HOH 9 109 109 HOH HOH C . K 3 HOH 10 110 110 HOH HOH C . K 3 HOH 11 111 112 HOH HOH C . K 3 HOH 12 112 116 HOH HOH C . K 3 HOH 13 113 113 HOH HOH C . K 3 HOH 14 114 111 HOH HOH C . K 3 HOH 15 115 114 HOH HOH C . K 3 HOH 16 116 115 HOH HOH C . K 3 HOH 17 117 117 HOH HOH C . K 3 HOH 18 118 118 HOH HOH C . K 3 HOH 19 119 119 HOH HOH C . K 3 HOH 20 120 120 HOH HOH C . K 3 HOH 21 121 125 HOH HOH C . K 3 HOH 22 122 122 HOH HOH C . K 3 HOH 23 123 124 HOH HOH C . K 3 HOH 24 124 121 HOH HOH C . K 3 HOH 25 125 123 HOH HOH C . K 3 HOH 26 126 126 HOH HOH C . K 3 HOH 27 127 127 HOH HOH C . K 3 HOH 28 128 128 HOH HOH C . K 3 HOH 29 129 129 HOH HOH C . K 3 HOH 30 130 131 HOH HOH C . K 3 HOH 31 131 132 HOH HOH C . K 3 HOH 32 132 133 HOH HOH C . K 3 HOH 33 133 134 HOH HOH C . K 3 HOH 34 134 135 HOH HOH C . K 3 HOH 35 135 136 HOH HOH C . K 3 HOH 36 136 138 HOH HOH C . K 3 HOH 37 137 137 HOH HOH C . K 3 HOH 38 138 139 HOH HOH C . K 3 HOH 39 139 140 HOH HOH C . L 3 HOH 1 101 101 HOH HOH D . L 3 HOH 2 102 103 HOH HOH D . L 3 HOH 3 103 102 HOH HOH D . L 3 HOH 4 104 104 HOH HOH D . L 3 HOH 5 105 105 HOH HOH D . L 3 HOH 6 106 107 HOH HOH D . L 3 HOH 7 107 106 HOH HOH D . L 3 HOH 8 108 108 HOH HOH D . L 3 HOH 9 109 109 HOH HOH D . L 3 HOH 10 110 110 HOH HOH D . L 3 HOH 11 111 113 HOH HOH D . L 3 HOH 12 112 112 HOH HOH D . L 3 HOH 13 113 111 HOH HOH D . L 3 HOH 14 114 115 HOH HOH D . L 3 HOH 15 115 116 HOH HOH D . L 3 HOH 16 116 117 HOH HOH D . L 3 HOH 17 117 120 HOH HOH D . L 3 HOH 18 118 118 HOH HOH D . L 3 HOH 19 119 119 HOH HOH D . L 3 HOH 20 120 122 HOH HOH D . L 3 HOH 21 121 114 HOH HOH D . L 3 HOH 22 122 121 HOH HOH D . L 3 HOH 23 123 124 HOH HOH D . L 3 HOH 24 124 123 HOH HOH D . L 3 HOH 25 125 129 HOH HOH D . L 3 HOH 26 126 125 HOH HOH D . L 3 HOH 27 127 128 HOH HOH D . L 3 HOH 28 128 126 HOH HOH D . L 3 HOH 29 129 127 HOH HOH D . L 3 HOH 30 130 131 HOH HOH D . L 3 HOH 31 131 130 HOH HOH D . L 3 HOH 32 132 133 HOH HOH D . L 3 HOH 33 133 132 HOH HOH D . L 3 HOH 34 134 135 HOH HOH D . L 3 HOH 35 135 134 HOH HOH D . L 3 HOH 36 136 137 HOH HOH D . L 3 HOH 37 137 136 HOH HOH D . L 3 HOH 38 138 139 HOH HOH D . L 3 HOH 39 139 140 HOH HOH D . L 3 HOH 40 140 142 HOH HOH D . L 3 HOH 41 141 141 HOH HOH D . L 3 HOH 42 142 143 HOH HOH D . M 3 HOH 1 101 101 HOH HOH E . M 3 HOH 2 102 103 HOH HOH E . M 3 HOH 3 103 107 HOH HOH E . M 3 HOH 4 104 104 HOH HOH E . M 3 HOH 5 105 105 HOH HOH E . M 3 HOH 6 106 106 HOH HOH E . M 3 HOH 7 107 108 HOH HOH E . M 3 HOH 8 108 109 HOH HOH E . M 3 HOH 9 109 111 HOH HOH E . M 3 HOH 10 110 113 HOH HOH E . M 3 HOH 11 111 114 HOH HOH E . M 3 HOH 12 112 110 HOH HOH E . M 3 HOH 13 113 115 HOH HOH E . M 3 HOH 14 114 116 HOH HOH E . M 3 HOH 15 115 118 HOH HOH E . M 3 HOH 16 116 117 HOH HOH E . M 3 HOH 17 117 121 HOH HOH E . M 3 HOH 18 118 119 HOH HOH E . M 3 HOH 19 119 112 HOH HOH E . M 3 HOH 20 120 122 HOH HOH E . M 3 HOH 21 121 120 HOH HOH E . M 3 HOH 22 122 126 HOH HOH E . M 3 HOH 23 123 128 HOH HOH E . M 3 HOH 24 124 127 HOH HOH E . M 3 HOH 25 125 125 HOH HOH E . M 3 HOH 26 126 124 HOH HOH E . M 3 HOH 27 127 123 HOH HOH E . M 3 HOH 28 128 129 HOH HOH E . M 3 HOH 29 129 132 HOH HOH E . M 3 HOH 30 130 131 HOH HOH E . M 3 HOH 31 131 133 HOH HOH E . M 3 HOH 32 132 134 HOH HOH E . M 3 HOH 33 133 135 HOH HOH E . M 3 HOH 34 134 136 HOH HOH E . M 3 HOH 35 135 137 HOH HOH E . M 3 HOH 36 136 139 HOH HOH E . M 3 HOH 37 137 138 HOH HOH E . M 3 HOH 38 138 140 HOH HOH E . M 3 HOH 39 139 141 HOH HOH E . M 3 HOH 40 140 142 HOH HOH E . M 3 HOH 41 141 143 HOH HOH E . M 3 HOH 42 142 145 HOH HOH E . M 3 HOH 43 143 147 HOH HOH E . M 3 HOH 44 144 146 HOH HOH E . M 3 HOH 45 145 148 HOH HOH E . N 3 HOH 1 101 101 HOH HOH F . N 3 HOH 2 102 103 HOH HOH F . N 3 HOH 3 103 102 HOH HOH F . N 3 HOH 4 104 106 HOH HOH F . N 3 HOH 5 105 104 HOH HOH F . N 3 HOH 6 106 105 HOH HOH F . N 3 HOH 7 107 107 HOH HOH F . N 3 HOH 8 108 108 HOH HOH F . N 3 HOH 9 109 113 HOH HOH F . N 3 HOH 10 110 110 HOH HOH F . N 3 HOH 11 111 109 HOH HOH F . N 3 HOH 12 112 114 HOH HOH F . N 3 HOH 13 113 115 HOH HOH F . N 3 HOH 14 114 111 HOH HOH F . N 3 HOH 15 115 116 HOH HOH F . N 3 HOH 16 116 118 HOH HOH F . N 3 HOH 17 117 117 HOH HOH F . N 3 HOH 18 118 112 HOH HOH F . N 3 HOH 19 119 120 HOH HOH F . N 3 HOH 20 120 119 HOH HOH F . N 3 HOH 21 121 121 HOH HOH F . N 3 HOH 22 122 122 HOH HOH F . N 3 HOH 23 123 124 HOH HOH F . N 3 HOH 24 124 123 HOH HOH F . N 3 HOH 25 125 125 HOH HOH F . N 3 HOH 26 126 127 HOH HOH F . N 3 HOH 27 127 128 HOH HOH F . N 3 HOH 28 128 129 HOH HOH F . N 3 HOH 29 129 131 HOH HOH F . N 3 HOH 30 130 130 HOH HOH F . N 3 HOH 31 131 126 HOH HOH F . N 3 HOH 32 132 132 HOH HOH F . N 3 HOH 33 133 134 HOH HOH F . N 3 HOH 34 134 133 HOH HOH F . N 3 HOH 35 135 136 HOH HOH F . N 3 HOH 36 136 135 HOH HOH F . N 3 HOH 37 137 137 HOH HOH F . N 3 HOH 38 138 139 HOH HOH F . N 3 HOH 39 139 141 HOH HOH F . N 3 HOH 40 140 138 HOH HOH F . N 3 HOH 41 141 142 HOH HOH F . N 3 HOH 42 142 143 HOH HOH F . N 3 HOH 43 143 140 HOH HOH F . N 3 HOH 44 144 144 HOH HOH F . N 3 HOH 45 145 145 HOH HOH F . N 3 HOH 46 146 146 HOH HOH F . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 3 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,G,H,I,J 2 1 C,D,K,L 3 1 E,F,M,N # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 740 ? 1 MORE -2 ? 1 'SSA (A^2)' 3090 ? 2 'ABSA (A^2)' 750 ? 2 MORE -2 ? 2 'SSA (A^2)' 3130 ? 3 'ABSA (A^2)' 740 ? 3 MORE -2 ? 3 'SSA (A^2)' 3090 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? I HOH . ? A HOH 236 ? 1_555 NA ? G NA . ? A NA 101 ? 1_555 O ? K HOH . ? C HOH 112 ? 1_555 173.7 ? 2 O ? I HOH . ? A HOH 236 ? 1_555 NA ? G NA . ? A NA 101 ? 1_555 O ? K HOH . ? C HOH 115 ? 1_555 88.5 ? 3 O ? K HOH . ? C HOH 112 ? 1_555 NA ? G NA . ? A NA 101 ? 1_555 O ? K HOH . ? C HOH 115 ? 1_555 87.0 ? 4 O ? I HOH . ? A HOH 236 ? 1_555 NA ? G NA . ? A NA 101 ? 1_555 O ? K HOH . ? C HOH 117 ? 1_555 86.6 ? 5 O ? K HOH . ? C HOH 112 ? 1_555 NA ? G NA . ? A NA 101 ? 1_555 O ? K HOH . ? C HOH 117 ? 1_555 89.2 ? 6 O ? K HOH . ? C HOH 115 ? 1_555 NA ? G NA . ? A NA 101 ? 1_555 O ? K HOH . ? C HOH 117 ? 1_555 93.0 ? 7 O ? I HOH . ? A HOH 236 ? 1_555 NA ? G NA . ? A NA 101 ? 1_555 O ? K HOH . ? C HOH 139 ? 1_555 93.6 ? 8 O ? K HOH . ? C HOH 112 ? 1_555 NA ? G NA . ? A NA 101 ? 1_555 O ? K HOH . ? C HOH 139 ? 1_555 90.7 ? 9 O ? K HOH . ? C HOH 115 ? 1_555 NA ? G NA . ? A NA 101 ? 1_555 O ? K HOH . ? C HOH 139 ? 1_555 88.8 ? 10 O ? K HOH . ? C HOH 117 ? 1_555 NA ? G NA . ? A NA 101 ? 1_555 O ? K HOH . ? C HOH 139 ? 1_555 178.1 ? 11 O ? I HOH . ? A HOH 236 ? 1_555 NA ? G NA . ? A NA 101 ? 1_555 O ? L HOH . ? D HOH 142 ? 1_555 93.4 ? 12 O ? K HOH . ? C HOH 112 ? 1_555 NA ? G NA . ? A NA 101 ? 1_555 O ? L HOH . ? D HOH 142 ? 1_555 91.1 ? 13 O ? K HOH . ? C HOH 115 ? 1_555 NA ? G NA . ? A NA 101 ? 1_555 O ? L HOH . ? D HOH 142 ? 1_555 177.7 ? 14 O ? K HOH . ? C HOH 117 ? 1_555 NA ? G NA . ? A NA 101 ? 1_555 O ? L HOH . ? D HOH 142 ? 1_555 88.4 ? 15 O ? K HOH . ? C HOH 139 ? 1_555 NA ? G NA . ? A NA 101 ? 1_555 O ? L HOH . ? D HOH 142 ? 1_555 89.8 ? 16 O ? I HOH . ? A HOH 235 ? 1_555 NA ? H NA . ? B NA 101 ? 1_555 O ? I HOH . ? A HOH 241 ? 1_555 90.1 ? 17 O ? I HOH . ? A HOH 235 ? 1_555 NA ? H NA . ? B NA 101 ? 1_555 O ? J HOH . ? B HOH 205 ? 1_555 80.6 ? 18 O ? I HOH . ? A HOH 241 ? 1_555 NA ? H NA . ? B NA 101 ? 1_555 O ? J HOH . ? B HOH 205 ? 1_555 170.1 ? 19 O ? I HOH . ? A HOH 235 ? 1_555 NA ? H NA . ? B NA 101 ? 1_555 O ? J HOH . ? B HOH 211 ? 1_555 166.8 ? 20 O ? I HOH . ? A HOH 241 ? 1_555 NA ? H NA . ? B NA 101 ? 1_555 O ? J HOH . ? B HOH 211 ? 1_555 95.5 ? 21 O ? J HOH . ? B HOH 205 ? 1_555 NA ? H NA . ? B NA 101 ? 1_555 O ? J HOH . ? B HOH 211 ? 1_555 94.3 ? 22 O ? I HOH . ? A HOH 235 ? 1_555 NA ? H NA . ? B NA 101 ? 1_555 O ? J HOH . ? B HOH 215 ? 1_555 81.3 ? 23 O ? I HOH . ? A HOH 241 ? 1_555 NA ? H NA . ? B NA 101 ? 1_555 O ? J HOH . ? B HOH 215 ? 1_555 90.3 ? 24 O ? J HOH . ? B HOH 205 ? 1_555 NA ? H NA . ? B NA 101 ? 1_555 O ? J HOH . ? B HOH 215 ? 1_555 91.4 ? 25 O ? J HOH . ? B HOH 211 ? 1_555 NA ? H NA . ? B NA 101 ? 1_555 O ? J HOH . ? B HOH 215 ? 1_555 86.8 ? 26 O ? I HOH . ? A HOH 235 ? 1_555 NA ? H NA . ? B NA 101 ? 1_555 O ? L HOH . ? D HOH 135 ? 1_555 102.7 ? 27 O ? I HOH . ? A HOH 241 ? 1_555 NA ? H NA . ? B NA 101 ? 1_555 O ? L HOH . ? D HOH 135 ? 1_555 91.2 ? 28 O ? J HOH . ? B HOH 205 ? 1_555 NA ? H NA . ? B NA 101 ? 1_555 O ? L HOH . ? D HOH 135 ? 1_555 87.8 ? 29 O ? J HOH . ? B HOH 211 ? 1_555 NA ? H NA . ? B NA 101 ? 1_555 O ? L HOH . ? D HOH 135 ? 1_555 89.1 ? 30 O ? J HOH . ? B HOH 215 ? 1_555 NA ? H NA . ? B NA 101 ? 1_555 O ? L HOH . ? D HOH 135 ? 1_555 175.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-04-27 2 'Structure model' 1 1 2016-06-15 3 'Structure model' 1 2 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' citation 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' pdbx_struct_conn_angle 7 3 'Structure model' pdbx_struct_oper_list 8 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.journal_id_CSD' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.value' 11 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 12 3 'Structure model' '_struct_conn.pdbx_dist_value' 13 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 14 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 15 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 16 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 17 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 18 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 19 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 20 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 21 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 22 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 23 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 24 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0107 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 E _pdbx_validate_rmsd_bond.auth_comp_id_1 RSQ _pdbx_validate_rmsd_bond.auth_seq_id_1 4 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 P _pdbx_validate_rmsd_bond.auth_asym_id_2 E _pdbx_validate_rmsd_bond.auth_comp_id_2 G _pdbx_validate_rmsd_bond.auth_seq_id_2 5 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.512 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.095 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" C A 3 ? ? P C A 3 ? ? OP2 C A 3 ? ? 99.75 105.70 -5.95 0.90 N 2 1 "O5'" E A 3 ? ? P E A 3 ? ? OP2 E A 3 ? ? 99.11 105.70 -6.59 0.90 N # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id G _pdbx_validate_planes.auth_asym_id C _pdbx_validate_planes.auth_seq_id 5 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.059 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? E HOH 145 ? 6.49 . 2 1 O ? F HOH 146 ? 7.27 . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 NA NA NA N N 114 RSQ P P N N 115 RSQ N1 N N N 116 RSQ C2 C N N 117 RSQ O2 O N N 118 RSQ N3 N N N 119 RSQ C4 C N N 120 RSQ N4 N N N 121 RSQ C5 C N N 122 RSQ C6 C N N 123 RSQ "C1'" C N R 124 RSQ C10 C N N 125 RSQ "C2'" C N R 126 RSQ "O2'" O N N 127 RSQ "C3'" C N S 128 RSQ "O3'" O N N 129 RSQ O30 O N N 130 RSQ "C4'" C N R 131 RSQ "O4'" O N N 132 RSQ "C5'" C N N 133 RSQ "O5'" O N N 134 RSQ OP1 O N N 135 RSQ OP2 O N N 136 RSQ OP3 O N N 137 RSQ H6 H N N 138 RSQ "H5'" H N N 139 RSQ "H1'" H N N 140 RSQ "H2'" H N N 141 RSQ "HO2'" H N N 142 RSQ H10 H N N 143 RSQ "H3'" H N N 144 RSQ "H4'" H N N 145 RSQ HN4 H N N 146 RSQ HN4A H N N 147 RSQ "H5'A" H N N 148 RSQ "HO3'" H N N 149 RSQ HOP2 H N N 150 RSQ HOP3 H N N 151 U OP3 O N N 152 U P P N N 153 U OP1 O N N 154 U OP2 O N N 155 U "O5'" O N N 156 U "C5'" C N N 157 U "C4'" C N R 158 U "O4'" O N N 159 U "C3'" C N S 160 U "O3'" O N N 161 U "C2'" C N R 162 U "O2'" O N N 163 U "C1'" C N R 164 U N1 N N N 165 U C2 C N N 166 U O2 O N N 167 U N3 N N N 168 U C4 C N N 169 U O4 O N N 170 U C5 C N N 171 U C6 C N N 172 U HOP3 H N N 173 U HOP2 H N N 174 U "H5'" H N N 175 U "H5''" H N N 176 U "H4'" H N N 177 U "H3'" H N N 178 U "HO3'" H N N 179 U "H2'" H N N 180 U "HO2'" H N N 181 U "H1'" H N N 182 U H3 H N N 183 U H5 H N N 184 U H6 H N N 185 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 RSQ OP1 P doub N N 118 RSQ "O5'" P sing N N 119 RSQ P OP2 sing N N 120 RSQ P OP3 sing N N 121 RSQ "C1'" N1 sing N N 122 RSQ N1 C2 sing N N 123 RSQ N1 C6 sing N N 124 RSQ O2 C2 doub N N 125 RSQ C2 N3 sing N N 126 RSQ N3 C4 doub N N 127 RSQ C5 C4 sing N N 128 RSQ C4 N4 sing N N 129 RSQ N4 HN4A sing N N 130 RSQ N4 HN4 sing N N 131 RSQ C6 C5 doub N N 132 RSQ C5 C10 sing N N 133 RSQ H6 C6 sing N N 134 RSQ "C2'" "C1'" sing N N 135 RSQ "H1'" "C1'" sing N N 136 RSQ "C1'" "O4'" sing N N 137 RSQ H10 C10 sing N N 138 RSQ C10 O30 doub N N 139 RSQ "O2'" "C2'" sing N N 140 RSQ "C2'" "C3'" sing N N 141 RSQ "C2'" "H2'" sing N N 142 RSQ "HO2'" "O2'" sing N N 143 RSQ "O3'" "C3'" sing N N 144 RSQ "C3'" "C4'" sing N N 145 RSQ "C3'" "H3'" sing N N 146 RSQ "O3'" "HO3'" sing N N 147 RSQ "H4'" "C4'" sing N N 148 RSQ "C4'" "O4'" sing N N 149 RSQ "C4'" "C5'" sing N N 150 RSQ "H5'" "C5'" sing N N 151 RSQ "C5'" "H5'A" sing N N 152 RSQ "C5'" "O5'" sing N N 153 RSQ OP2 HOP2 sing N N 154 RSQ OP3 HOP3 sing N N 155 U OP3 P sing N N 156 U OP3 HOP3 sing N N 157 U P OP1 doub N N 158 U P OP2 sing N N 159 U P "O5'" sing N N 160 U OP2 HOP2 sing N N 161 U "O5'" "C5'" sing N N 162 U "C5'" "C4'" sing N N 163 U "C5'" "H5'" sing N N 164 U "C5'" "H5''" sing N N 165 U "C4'" "O4'" sing N N 166 U "C4'" "C3'" sing N N 167 U "C4'" "H4'" sing N N 168 U "O4'" "C1'" sing N N 169 U "C3'" "O3'" sing N N 170 U "C3'" "C2'" sing N N 171 U "C3'" "H3'" sing N N 172 U "O3'" "HO3'" sing N N 173 U "C2'" "O2'" sing N N 174 U "C2'" "C1'" sing N N 175 U "C2'" "H2'" sing N N 176 U "O2'" "HO2'" sing N N 177 U "C1'" N1 sing N N 178 U "C1'" "H1'" sing N N 179 U N1 C2 sing N N 180 U N1 C6 sing N N 181 U C2 O2 doub N N 182 U C2 N3 sing N N 183 U N3 C4 sing N N 184 U N3 H3 sing N N 185 U C4 O4 doub N N 186 U C4 C5 sing N N 187 U C5 C6 doub N N 188 U C5 H5 sing N N 189 U C6 H6 sing N N 190 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5HNJ 'double helix' 5HNJ 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 B C 8 1_555 -0.212 -0.086 0.073 -7.024 -15.422 0.748 1 A_G1:C8_B A 1 ? B 8 ? 19 1 1 A U 2 1_555 B A 7 1_555 -0.018 -0.097 0.172 -3.726 -13.004 2.238 2 A_U2:A7_B A 2 ? B 7 ? 20 1 1 A A 3 1_555 B U 6 1_555 0.019 -0.136 0.102 -2.661 -14.195 2.617 3 A_A3:U6_B A 3 ? B 6 ? 20 1 1 A RSQ 4 1_555 B G 5 1_555 0.149 -0.224 0.105 1.697 -16.043 -1.275 4 A_RSQ4:G5_B A 4 ? B 5 ? 19 1 1 A G 5 1_555 B RSQ 4 1_555 -0.203 -0.169 0.099 -4.320 -15.944 -0.932 5 A_G5:RSQ4_B A 5 ? B 4 ? 19 1 1 A U 6 1_555 B A 3 1_555 -0.088 -0.095 0.112 -2.642 -14.421 -2.478 6 A_U6:A3_B A 6 ? B 3 ? 20 1 1 A A 7 1_555 B U 2 1_555 0.055 -0.139 0.016 -3.163 -14.617 0.559 7 A_A7:U2_B A 7 ? B 2 ? 20 1 1 A C 8 1_555 B G 1 1_555 0.353 -0.194 0.143 -1.719 -18.388 -0.204 8 A_C8:G1_B A 8 ? B 1 ? 19 1 1 C G 1 1_555 D C 8 1_555 -0.163 -0.195 0.030 -6.927 -20.919 -0.260 9 C_G1:C8_D C 1 ? D 8 ? 19 1 1 C U 2 1_555 D A 7 1_555 0.030 -0.084 0.281 1.219 -16.135 5.960 10 C_U2:A7_D C 2 ? D 7 ? 20 1 1 C A 3 1_555 D U 6 1_555 0.036 -0.088 0.111 1.143 -13.671 2.924 11 C_A3:U6_D C 3 ? D 6 ? 20 1 1 C RSQ 4 1_555 D G 5 1_555 0.100 -0.203 0.113 2.903 -14.610 -0.865 12 C_RSQ4:G5_D C 4 ? D 5 ? 19 1 1 C G 5 1_555 D RSQ 4 1_555 -0.110 -0.151 0.187 1.099 -12.282 -3.905 13 C_G5:RSQ4_D C 5 ? D 4 ? 19 1 1 C U 6 1_555 D A 3 1_555 0.053 -0.096 0.025 6.098 -11.644 3.965 14 C_U6:A3_D C 6 ? D 3 ? 20 1 1 C A 7 1_555 D U 2 1_555 -0.033 -0.150 -0.022 5.718 -14.720 0.229 15 C_A7:U2_D C 7 ? D 2 ? 20 1 1 C C 8 1_555 D G 1 1_555 0.311 -0.128 0.074 2.196 -11.044 0.498 16 C_C8:G1_D C 8 ? D 1 ? 19 1 1 E G 1 1_555 F C 8 1_555 -0.175 -0.162 0.086 -4.301 -11.380 -0.144 17 E_G1:C8_F E 1 ? F 8 ? 19 1 1 E U 2 1_555 F A 7 1_555 -0.030 -0.095 -0.048 2.467 -12.382 -0.787 18 E_U2:A7_F E 2 ? F 7 ? 20 1 1 E A 3 1_555 F U 6 1_555 -0.038 -0.132 0.119 4.257 -12.078 1.093 19 E_A3:U6_F E 3 ? F 6 ? 20 1 1 E RSQ 4 1_555 F G 5 1_555 0.096 -0.153 -0.024 9.588 -17.286 -1.247 20 E_RSQ4:G5_F E 4 ? F 5 ? 19 1 1 E G 5 1_555 F RSQ 4 1_555 -0.240 -0.169 0.151 1.704 -14.161 -1.064 21 E_G5:RSQ4_F E 5 ? F 4 ? 19 1 1 E U 6 1_555 F A 3 1_555 -0.039 -0.069 0.229 0.912 -15.611 4.425 22 E_U6:A3_F E 6 ? F 3 ? 20 1 1 E A 7 1_555 F U 2 1_555 0.050 -0.107 0.016 -1.466 -13.607 0.792 23 E_A7:U2_F E 7 ? F 2 ? 20 1 1 E C 8 1_555 F G 1 1_555 0.343 -0.177 0.177 1.476 -16.155 -1.508 24 E_C8:G1_F E 8 ? F 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 B C 8 1_555 A U 2 1_555 B A 7 1_555 -0.289 -1.186 3.124 -2.027 3.637 35.173 -2.453 0.196 3.002 5.993 3.339 35.411 1 AA_G1U2:A7C8_BB A 1 ? B 8 ? A 2 ? B 7 ? 1 A U 2 1_555 B A 7 1_555 A A 3 1_555 B U 6 1_555 0.080 -1.306 3.043 1.104 12.126 31.622 -3.931 0.016 2.396 21.290 -1.939 33.829 2 AA_U2A3:U6A7_BB A 2 ? B 7 ? A 3 ? B 6 ? 1 A A 3 1_555 B U 6 1_555 A RSQ 4 1_555 B G 5 1_555 -0.266 -1.253 3.122 -0.027 2.929 33.141 -2.648 0.460 3.003 5.123 0.048 33.266 3 AA_A3RSQ4:G5U6_BB A 3 ? B 6 ? A 4 ? B 5 ? 1 A RSQ 4 1_555 B G 5 1_555 A G 5 1_555 B RSQ 4 1_555 0.155 -1.611 3.254 0.690 12.270 30.239 -4.804 -0.168 2.436 22.393 -1.259 32.586 4 AA_RSQ4G5:RSQ4G5_BB A 4 ? B 5 ? A 5 ? B 4 ? 1 A G 5 1_555 B RSQ 4 1_555 A U 6 1_555 B A 3 1_555 -0.151 -1.390 3.153 -0.449 4.775 34.199 -3.034 0.189 2.939 8.070 0.758 34.524 5 AA_G5U6:A3RSQ4_BB A 5 ? B 4 ? A 6 ? B 3 ? 1 A U 6 1_555 B A 3 1_555 A A 7 1_555 B U 2 1_555 0.236 -1.302 3.164 -0.046 12.864 32.876 -3.866 -0.396 2.496 21.721 0.077 35.238 6 AA_U6A7:U2A3_BB A 6 ? B 3 ? A 7 ? B 2 ? 1 A A 7 1_555 B U 2 1_555 A C 8 1_555 B G 1 1_555 0.430 -1.544 3.199 1.875 7.533 33.076 -3.768 -0.457 2.809 13.009 -3.238 33.950 7 AA_A7C8:G1U2_BB A 7 ? B 2 ? A 8 ? B 1 ? 1 A C 8 1_555 B G 1 1_555 C G 1 1_555 D C 8 1_555 0.793 -2.101 3.186 5.331 20.033 22.758 -6.998 -0.692 1.158 41.391 -11.015 30.692 8 AC_C8G1:C8G1_DB A 8 ? B 1 ? C 1 ? D 8 ? 1 C G 1 1_555 D C 8 1_555 C U 2 1_555 D A 7 1_555 0.926 -1.419 2.965 -0.039 4.174 35.403 -2.852 -1.519 2.784 6.835 0.064 35.640 9 CC_G1U2:A7C8_DD C 1 ? D 8 ? C 2 ? D 7 ? 1 C U 2 1_555 D A 7 1_555 C A 3 1_555 D U 6 1_555 -0.067 -1.628 3.046 0.246 12.456 29.424 -4.854 0.160 2.193 23.253 -0.459 31.900 10 CC_U2A3:U6A7_DD C 2 ? D 7 ? C 3 ? D 6 ? 1 C A 3 1_555 D U 6 1_555 C RSQ 4 1_555 D G 5 1_555 -0.805 -2.183 3.180 -2.664 2.531 29.038 -4.844 1.042 3.043 5.022 5.287 29.265 11 CC_A3RSQ4:G5U6_DD C 3 ? D 6 ? C 4 ? D 5 ? 1 C RSQ 4 1_555 D G 5 1_555 C G 5 1_555 D RSQ 4 1_555 -0.945 -1.819 3.173 -2.727 13.327 28.551 -5.488 1.298 2.205 25.288 5.174 31.565 12 CC_RSQ4G5:RSQ4G5_DD C 4 ? D 5 ? C 5 ? D 4 ? 1 C G 5 1_555 D RSQ 4 1_555 C U 6 1_555 D A 3 1_555 0.304 -1.106 3.163 -0.245 8.383 31.150 -3.372 -0.588 2.776 15.266 0.447 32.232 13 CC_G5U6:A3RSQ4_DD C 5 ? D 4 ? C 6 ? D 3 ? 1 C U 6 1_555 D A 3 1_555 C A 7 1_555 D U 2 1_555 -0.215 -1.063 3.173 0.772 14.193 34.829 -3.343 0.426 2.558 22.583 -1.228 37.535 14 CC_U6A7:U2A3_DD C 6 ? D 3 ? C 7 ? D 2 ? 1 C A 7 1_555 D U 2 1_555 C C 8 1_555 D G 1 1_555 0.553 -1.379 3.317 0.470 7.916 33.787 -3.491 -0.859 2.936 13.392 -0.794 34.679 15 CC_A7C8:G1U2_DD C 7 ? D 2 ? C 8 ? D 1 ? 1 C C 8 1_555 D G 1 1_555 E G 1 1_555 F C 8 1_555 0.056 -3.643 3.459 0.641 11.439 -14.153 2.146 0.702 4.972 -39.092 2.189 -18.191 16 CE_C8G1:C8G1_FD C 8 ? D 1 ? E 1 ? F 8 ? 1 E G 1 1_555 F C 8 1_555 E U 2 1_555 F A 7 1_555 -0.568 -1.216 3.101 -0.828 7.094 32.286 -3.232 0.870 2.792 12.566 1.466 33.046 17 EE_G1U2:A7C8_FF E 1 ? F 8 ? E 2 ? F 7 ? 1 E U 2 1_555 F A 7 1_555 E A 3 1_555 F U 6 1_555 0.257 -1.231 3.153 -1.271 11.326 31.478 -3.827 -0.636 2.557 20.071 2.252 33.429 18 EE_U2A3:U6A7_FF E 2 ? F 7 ? E 3 ? F 6 ? 1 E A 3 1_555 F U 6 1_555 E RSQ 4 1_555 F G 5 1_555 -0.159 -1.342 3.139 0.311 4.587 32.511 -3.108 0.332 2.926 8.143 -0.552 32.826 19 EE_A3RSQ4:G5U6_FF E 3 ? F 6 ? E 4 ? F 5 ? 1 E RSQ 4 1_555 F G 5 1_555 E G 5 1_555 F RSQ 4 1_555 -0.391 -1.606 3.262 -3.490 14.423 30.294 -4.890 0.162 2.312 25.747 6.230 33.657 20 EE_RSQ4G5:RSQ4G5_FF E 4 ? F 5 ? E 5 ? F 4 ? 1 E G 5 1_555 F RSQ 4 1_555 E U 6 1_555 F A 3 1_555 0.656 -1.571 3.246 -0.349 6.249 33.894 -3.574 -1.160 2.912 10.607 0.592 34.451 21 EE_G5U6:A3RSQ4_FF E 5 ? F 4 ? E 6 ? F 3 ? 1 E U 6 1_555 F A 3 1_555 E A 7 1_555 F U 2 1_555 -0.506 -1.490 3.102 0.966 15.792 32.025 -4.380 0.945 2.141 26.686 -1.632 35.628 22 EE_U6A7:U2A3_FF E 6 ? F 3 ? E 7 ? F 2 ? 1 E A 7 1_555 F U 2 1_555 E C 8 1_555 F G 1 1_555 0.667 -1.369 3.142 2.460 6.437 33.804 -3.240 -0.770 2.881 10.930 -4.176 34.479 23 EE_A7C8:G1U2_FF E 7 ? F 2 ? E 8 ? F 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SODIUM ION' NA 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 197D _pdbx_initial_refinement_model.details ? #