data_5JR0 # _entry.id 5JR0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5JR0 WWPDB D_1000219482 BMRB 30076 # _pdbx_database_related.db_name BMRB _pdbx_database_related.details . _pdbx_database_related.db_id 30076 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5JR0 _pdbx_database_status.recvd_initial_deposition_date 2016-05-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Niitsu, A.' 1 'Egawa, A.' 2 'Ikeda, K.' 3 'Tachibana, K.' 4 'Fujiwara, T.' 5 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Veratridine binding to a transmembrane segment of mammalian sodium channel Nav1.4 determined by solid-state NMR' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Niitsu, A.' 1 primary 'Egawa, A.' 2 primary 'Ikeda, K.' 3 primary 'Tachibana, K.' 4 primary 'Fujiwara, T.' 5 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'Sodium channel protein type 4 subunit alpha' _entity.formula_weight 4033.070 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'UNP RESIDUES 1567-1594' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Mu-1,SkM1,Sodium channel protein skeletal muscle subunit alpha,Sodium channel protein type IV subunit alpha,Voltage-gated sodium channel subunit alpha Nav1.4 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'KKKGICFFCSYIIISFLIVVNMYIAIILENFKKK(NH2)' _entity_poly.pdbx_seq_one_letter_code_can KKKGICFFCSYIIISFLIVVNMYIAIILENFKKKX _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 LYS n 1 3 LYS n 1 4 GLY n 1 5 ILE n 1 6 CYS n 1 7 PHE n 1 8 PHE n 1 9 CYS n 1 10 SER n 1 11 TYR n 1 12 ILE n 1 13 ILE n 1 14 ILE n 1 15 SER n 1 16 PHE n 1 17 LEU n 1 18 ILE n 1 19 VAL n 1 20 VAL n 1 21 ASN n 1 22 MET n 1 23 TYR n 1 24 ILE n 1 25 ALA n 1 26 ILE n 1 27 ILE n 1 28 LEU n 1 29 GLU n 1 30 ASN n 1 31 PHE n 1 32 LYS n 1 33 LYS n 1 34 LYS n 1 35 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 35 _pdbx_entity_src_syn.organism_scientific 'Rattus norvegicus' _pdbx_entity_src_syn.organism_common_name Rat _pdbx_entity_src_syn.ncbi_taxonomy_id 10116 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SCN4A_RAT _struct_ref.pdbx_db_accession P15390 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code GICFFCSYIIISFLIVVNMYIAIILENF _struct_ref.pdbx_align_begin 1567 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5JR0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 31 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P15390 _struct_ref_seq.db_align_beg 1567 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1594 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 4 _struct_ref_seq.pdbx_auth_seq_align_end 31 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5JR0 LYS A 1 ? UNP P15390 ? ? 'expression tag' 1 1 1 5JR0 LYS A 2 ? UNP P15390 ? ? 'expression tag' 2 2 1 5JR0 LYS A 3 ? UNP P15390 ? ? 'expression tag' 3 3 1 5JR0 LYS A 32 ? UNP P15390 ? ? 'expression tag' 32 4 1 5JR0 LYS A 33 ? UNP P15390 ? ? 'expression tag' 33 5 1 5JR0 LYS A 34 ? UNP P15390 ? ? 'expression tag' 34 6 1 5JR0 NH2 A 35 ? UNP P15390 ? ? amidation 35 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '13C-13C dipolar-assisted rotational resonance' 1 anisotropic 2 1 2 '13C-13C dipolar-assisted rotational resonance' 1 anisotropic 3 1 1 '13C observation of 2H-selective 1H-depolarization' 1 anisotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 213 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.4 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.label condition_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '16 % U-13C I23, L17, V20 peptide, 69 % d-54 DMPC, water' water Label1 liposome ? 2 '16 % U-13C G, I, F, L, V, A peptide, 69 % d-54 DMPC, water' water Label2 liposome ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'Infinity Plus 700' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 5JR0 _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 5JR0 _pdbx_nmr_ensemble.conformers_calculated_total_number 1000 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' # _pdbx_nmr_representative.entry_id 5JR0 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria ? # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement CHARMM ? 'M. KARPLUS ET AL, HARVARD UNIVERSITY' 1 'structure solution' FELIX ? ? 2 'structure solution' DELTA ? ? 3 'structure solution' SPARKY ? ? 4 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5JR0 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLID-STATE NMR' _exptl.method_details ? # _struct.entry_id 5JR0 _struct.title 'Domain 4 Segment 6 of voltage-gated sodium channel Nav1.4' _struct.pdbx_descriptor 'Sodium channel protein type 4 subunit alpha' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5JR0 _struct_keywords.text 'transmembrane, alpha-helix, protein fragment, METAL BINDING PROTEIN' _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id ILE _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 5 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id LYS _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 34 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ILE _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 5 _struct_conf.end_auth_comp_id LYS _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 34 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 30 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag both _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 34 _struct_conn.ptnr1_label_atom_id C _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id NH2 _struct_conn.ptnr2_label_seq_id 35 _struct_conn.ptnr2_label_atom_id N _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 34 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id NH2 _struct_conn.ptnr2_auth_seq_id 35 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.347 _struct_conn.pdbx_value_order ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 5JR0 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 1 LYS LYS A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 PHE 7 7 7 PHE PHE A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 CYS 9 9 9 CYS CYS A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 PHE 16 16 16 PHE PHE A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 MET 22 22 22 MET MET A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 ILE 24 24 24 ILE ILE A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 PHE 31 31 31 PHE PHE A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 NH2 35 35 35 NH2 NH2 A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2017-05-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 peptide 16 ? % 'U-13C I23, L17, V20' 1 DMPC 69 ? % d-54 2 peptide 16 ? % 'U-13C G, I, F, L, V, A' 2 DMPC 69 ? % d-54 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 6 O A CYS 6 ? ? HG A SER 10 ? ? 1.55 2 9 OE2 A GLU 29 ? ? HZ2 A LYS 32 ? ? 1.55 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 2 CG A TYR 23 ? ? CD1 A TYR 23 ? ? 1.477 1.387 0.090 0.013 N 2 5 CE1 A TYR 23 ? ? CZ A TYR 23 ? ? 1.472 1.381 0.091 0.013 N 3 5 CG A PHE 31 ? ? CD2 A PHE 31 ? ? 1.498 1.383 0.115 0.015 N 4 6 CA A LYS 3 ? ? CB A LYS 3 ? ? 1.674 1.535 0.139 0.022 N 5 8 CG A TYR 23 ? ? CD1 A TYR 23 ? ? 1.465 1.387 0.078 0.013 N 6 9 CZ A TYR 11 ? ? OH A TYR 11 ? ? 1.509 1.374 0.135 0.017 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A PHE 8 ? ? CG A PHE 8 ? ? CD2 A PHE 8 ? ? 114.97 120.80 -5.83 0.70 N 2 1 CB A PHE 8 ? ? CG A PHE 8 ? ? CD1 A PHE 8 ? ? 125.30 120.80 4.50 0.70 N 3 1 CB A PHE 16 ? ? CG A PHE 16 ? ? CD2 A PHE 16 ? ? 128.68 120.80 7.88 0.70 N 4 1 CB A PHE 16 ? ? CG A PHE 16 ? ? CD1 A PHE 16 ? ? 112.82 120.80 -7.98 0.70 N 5 1 CG A MET 22 ? ? SD A MET 22 ? ? CE A MET 22 ? ? 90.51 100.20 -9.69 1.60 N 6 1 CB A TYR 23 ? ? CG A TYR 23 ? ? CD2 A TYR 23 ? ? 124.86 121.00 3.86 0.60 N 7 1 CB A PHE 31 ? ? CG A PHE 31 ? ? CD1 A PHE 31 ? ? 115.19 120.80 -5.61 0.70 N 8 2 CB A PHE 16 ? ? CG A PHE 16 ? ? CD2 A PHE 16 ? ? 125.97 120.80 5.17 0.70 N 9 2 CB A PHE 16 ? ? CG A PHE 16 ? ? CD1 A PHE 16 ? ? 115.92 120.80 -4.88 0.70 N 10 2 CG A TYR 23 ? ? CD1 A TYR 23 ? ? CE1 A TYR 23 ? ? 115.49 121.30 -5.81 0.80 N 11 2 CD1 A TYR 23 ? ? CE1 A TYR 23 ? ? CZ A TYR 23 ? ? 125.78 119.80 5.98 0.90 N 12 2 CB A PHE 31 ? ? CG A PHE 31 ? ? CD1 A PHE 31 ? ? 115.44 120.80 -5.36 0.70 N 13 3 CB A PHE 7 ? ? CG A PHE 7 ? ? CD2 A PHE 7 ? ? 112.86 120.80 -7.94 0.70 N 14 3 CB A LEU 28 ? ? CG A LEU 28 ? ? CD2 A LEU 28 ? ? 100.35 111.00 -10.65 1.70 N 15 4 O A PHE 8 ? ? C A PHE 8 ? ? N A CYS 9 ? ? 112.67 122.70 -10.03 1.60 Y 16 4 CB A TYR 11 ? ? CG A TYR 11 ? ? CD2 A TYR 11 ? ? 127.44 121.00 6.44 0.60 N 17 4 CB A TYR 11 ? ? CG A TYR 11 ? ? CD1 A TYR 11 ? ? 115.68 121.00 -5.32 0.60 N 18 4 CB A TYR 23 ? ? CG A TYR 23 ? ? CD2 A TYR 23 ? ? 117.06 121.00 -3.94 0.60 N 19 4 CB A PHE 31 ? ? CG A PHE 31 ? ? CD2 A PHE 31 ? ? 125.04 120.80 4.24 0.70 N 20 5 CB A PHE 16 ? ? CG A PHE 16 ? ? CD1 A PHE 16 ? ? 115.03 120.80 -5.77 0.70 N 21 5 CB A TYR 23 ? ? CG A TYR 23 ? ? CD1 A TYR 23 ? ? 124.87 121.00 3.87 0.60 N 22 5 N A ALA 25 ? ? CA A ALA 25 ? ? CB A ALA 25 ? ? 120.52 110.10 10.42 1.40 N 23 6 CB A TYR 11 ? ? CG A TYR 11 ? ? CD2 A TYR 11 ? ? 113.76 121.00 -7.24 0.60 N 24 6 CB A TYR 11 ? ? CG A TYR 11 ? ? CD1 A TYR 11 ? ? 128.74 121.00 7.74 0.60 N 25 6 CB A TYR 23 ? ? CG A TYR 23 ? ? CD1 A TYR 23 ? ? 114.56 121.00 -6.44 0.60 N 26 6 CG A TYR 23 ? ? CD2 A TYR 23 ? ? CE2 A TYR 23 ? ? 115.24 121.30 -6.06 0.80 N 27 7 CG A TYR 11 ? ? CD1 A TYR 11 ? ? CE1 A TYR 11 ? ? 115.46 121.30 -5.84 0.80 N 28 7 CB A PHE 16 ? ? CG A PHE 16 ? ? CD2 A PHE 16 ? ? 116.13 120.80 -4.67 0.70 N 29 7 CB A PHE 16 ? ? CG A PHE 16 ? ? CD1 A PHE 16 ? ? 126.63 120.80 5.83 0.70 N 30 8 CB A PHE 7 ? ? CG A PHE 7 ? ? CD2 A PHE 7 ? ? 125.31 120.80 4.51 0.70 N 31 8 CB A TYR 11 ? ? CG A TYR 11 ? ? CD2 A TYR 11 ? ? 117.13 121.00 -3.87 0.60 N 32 8 CB A PHE 16 ? ? CG A PHE 16 ? ? CD2 A PHE 16 ? ? 113.79 120.80 -7.01 0.70 N 33 8 CG A PHE 16 ? ? CD2 A PHE 16 ? ? CE2 A PHE 16 ? ? 114.16 120.80 -6.64 1.10 N 34 8 CB A TYR 23 ? ? CG A TYR 23 ? ? CD2 A TYR 23 ? ? 116.21 121.00 -4.79 0.60 N 35 9 CB A TYR 11 ? ? CG A TYR 11 ? ? CD2 A TYR 11 ? ? 125.61 121.00 4.61 0.60 N 36 9 CG A MET 22 ? ? SD A MET 22 ? ? CE A MET 22 ? ? 89.44 100.20 -10.76 1.60 N 37 9 CA A ILE 26 ? ? CB A ILE 26 ? ? CG2 A ILE 26 ? ? 123.27 110.90 12.37 2.00 N 38 9 CB A PHE 31 ? ? CG A PHE 31 ? ? CD1 A PHE 31 ? ? 115.93 120.80 -4.87 0.70 N 39 10 CB A PHE 16 ? ? CG A PHE 16 ? ? CD2 A PHE 16 ? ? 115.10 120.80 -5.70 0.70 N 40 10 CB A PHE 16 ? ? CG A PHE 16 ? ? CD1 A PHE 16 ? ? 127.46 120.80 6.66 0.70 N 41 10 CB A PHE 31 ? ? CG A PHE 31 ? ? CD2 A PHE 31 ? ? 126.23 120.80 5.43 0.70 N 42 10 CB A PHE 31 ? ? CG A PHE 31 ? ? CD1 A PHE 31 ? ? 116.42 120.80 -4.38 0.70 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 2 TYR A 11 ? ? 0.085 'SIDE CHAIN' 2 2 TYR A 23 ? ? 0.068 'SIDE CHAIN' 3 3 TYR A 23 ? ? 0.088 'SIDE CHAIN' 4 8 PHE A 8 ? ? 0.098 'SIDE CHAIN' 5 8 TYR A 11 ? ? 0.100 'SIDE CHAIN' 6 9 PHE A 16 ? ? 0.088 'SIDE CHAIN' 7 10 TYR A 23 ? ? 0.083 'SIDE CHAIN' # _pdbx_audit_support.funding_organization 'Japan Society for the Promotion of Science' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 #