data_5K5I # _entry.id 5K5I # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5K5I pdb_00005k5i 10.2210/pdb5k5i/pdb WWPDB D_1000221739 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-05-24 2 'Structure model' 1 1 2017-06-07 3 'Structure model' 1 2 2017-06-14 4 'Structure model' 1 3 2017-09-20 5 'Structure model' 1 4 2017-11-22 6 'Structure model' 1 5 2019-12-25 7 'Structure model' 1 6 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 5 'Structure model' 'Database references' 5 6 'Structure model' 'Author supporting evidence' 6 7 'Structure model' 'Data collection' 7 7 'Structure model' 'Database references' 8 7 'Structure model' 'Derived calculations' 9 7 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 4 'Structure model' pdbx_audit_support 3 5 'Structure model' pdbx_database_related 4 6 'Structure model' pdbx_audit_support 5 7 'Structure model' chem_comp_atom 6 7 'Structure model' chem_comp_bond 7 7 'Structure model' database_2 8 7 'Structure model' pdbx_struct_conn_angle 9 7 'Structure model' refine_hist 10 7 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.country' 2 3 'Structure model' '_citation.journal_id_ASTM' 3 3 'Structure model' '_citation.journal_id_CSD' 4 3 'Structure model' '_citation.journal_volume' 5 3 'Structure model' '_citation.page_first' 6 3 'Structure model' '_citation.page_last' 7 4 'Structure model' '_pdbx_audit_support.funding_organization' 8 5 'Structure model' '_pdbx_database_related.db_id' 9 6 'Structure model' '_pdbx_audit_support.funding_organization' 10 7 'Structure model' '_database_2.pdbx_DOI' 11 7 'Structure model' '_database_2.pdbx_database_accession' 12 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 13 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 14 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 15 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 16 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 17 7 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 18 7 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 19 7 'Structure model' '_pdbx_struct_conn_angle.ptnr2_symmetry' 20 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 21 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 22 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 23 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 24 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 25 7 'Structure model' '_pdbx_struct_conn_angle.value' 26 7 'Structure model' '_refine_hist.d_res_high' 27 7 'Structure model' '_struct_conn.pdbx_dist_value' 28 7 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 29 7 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 30 7 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 7 'Structure model' '_struct_conn.ptnr1_label_comp_id' 32 7 'Structure model' '_struct_conn.ptnr1_label_seq_id' 33 7 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 7 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 7 'Structure model' '_struct_conn.ptnr2_symmetry' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5K5I _pdbx_database_status.recvd_initial_deposition_date 2016-05-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 5K5L unspecified PDB . 5K5J unspecified PDB . 5K5H unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hashimoto, H.' 1 'Cheng, X.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Mol. Cell' _citation.journal_id_ASTM MOCEFL _citation.journal_id_CSD 2168 _citation.journal_id_ISSN 1097-4164 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 66 _citation.language ? _citation.page_first 711 _citation.page_last 720.e3 _citation.title 'Structural Basis for the Versatile and Methylation-Dependent Binding of CTCF to DNA.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.molcel.2017.05.004 _citation.pdbx_database_id_PubMed 28529057 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hashimoto, H.' 1 ? primary 'Wang, D.' 2 ? primary 'Horton, J.R.' 3 ? primary 'Zhang, X.' 4 ? primary 'Corces, V.G.' 5 ? primary 'Cheng, X.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcriptional repressor CTCF' 13722.850 1 ? ? 'unp residues 378-489' ? 2 polymer syn ;DNA (5'-D(*CP*CP*CP*TP*GP*CP*TP*GP*GP*CP*AP*CP*C)-3') ; 3888.525 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*GP*TP*GP*CP*CP*AP*GP*CP*AP*GP*GP*GP*G)-3') ; 4057.635 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 5 ? ? ? ? 5 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 6 water nat water 18.015 10 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '11-zinc finger protein,CCCTC-binding factor,CTCFL paralog' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPLGSPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL GVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSH ; ;GPLGSPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL GVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSH ; A ? 2 polydeoxyribonucleotide no no '(DC)(DC)(DC)(DT)(DG)(DC)(DT)(DG)(DG)(DC)(DA)(DC)(DC)' CCCTGCTGGCACC B ? 3 polydeoxyribonucleotide no no '(DG)(DT)(DG)(DC)(DC)(DA)(DG)(DC)(DA)(DG)(DG)(DG)(DG)' GTGCCAGCAGGGG C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 'SULFATE ION' SO4 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 PRO n 1 7 PHE n 1 8 GLN n 1 9 CYS n 1 10 SER n 1 11 LEU n 1 12 CYS n 1 13 SER n 1 14 TYR n 1 15 ALA n 1 16 SER n 1 17 ARG n 1 18 ASP n 1 19 THR n 1 20 TYR n 1 21 LYS n 1 22 LEU n 1 23 LYS n 1 24 ARG n 1 25 HIS n 1 26 MET n 1 27 ARG n 1 28 THR n 1 29 HIS n 1 30 SER n 1 31 GLY n 1 32 GLU n 1 33 LYS n 1 34 PRO n 1 35 TYR n 1 36 GLU n 1 37 CYS n 1 38 TYR n 1 39 ILE n 1 40 CYS n 1 41 HIS n 1 42 ALA n 1 43 ARG n 1 44 PHE n 1 45 THR n 1 46 GLN n 1 47 SER n 1 48 GLY n 1 49 THR n 1 50 MET n 1 51 LYS n 1 52 MET n 1 53 HIS n 1 54 ILE n 1 55 LEU n 1 56 GLN n 1 57 LYS n 1 58 HIS n 1 59 THR n 1 60 GLU n 1 61 ASN n 1 62 VAL n 1 63 ALA n 1 64 LYS n 1 65 PHE n 1 66 HIS n 1 67 CYS n 1 68 PRO n 1 69 HIS n 1 70 CYS n 1 71 ASP n 1 72 THR n 1 73 VAL n 1 74 ILE n 1 75 ALA n 1 76 ARG n 1 77 LYS n 1 78 SER n 1 79 ASP n 1 80 LEU n 1 81 GLY n 1 82 VAL n 1 83 HIS n 1 84 LEU n 1 85 ARG n 1 86 LYS n 1 87 GLN n 1 88 HIS n 1 89 SER n 1 90 TYR n 1 91 ILE n 1 92 GLU n 1 93 GLN n 1 94 GLY n 1 95 LYS n 1 96 LYS n 1 97 CYS n 1 98 ARG n 1 99 TYR n 1 100 CYS n 1 101 ASP n 1 102 ALA n 1 103 VAL n 1 104 PHE n 1 105 HIS n 1 106 GLU n 1 107 ARG n 1 108 TYR n 1 109 ALA n 1 110 LEU n 1 111 ILE n 1 112 GLN n 1 113 HIS n 1 114 GLN n 1 115 LYS n 1 116 SER n 1 117 HIS n 2 1 DC n 2 2 DC n 2 3 DC n 2 4 DT n 2 5 DG n 2 6 DC n 2 7 DT n 2 8 DG n 2 9 DG n 2 10 DC n 2 11 DA n 2 12 DC n 2 13 DC n 3 1 DG n 3 2 DT n 3 3 DG n 3 4 DC n 3 5 DC n 3 6 DA n 3 7 DG n 3 8 DC n 3 9 DA n 3 10 DG n 3 11 DG n 3 12 DG n 3 13 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 117 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CTCF _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3) RIL-codon plus' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type pGEX-6p-1 _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pXC1199 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 13 'synthetic construct' ? 32630 ? 3 1 sample 1 13 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 373 ? ? ? A . n A 1 2 PRO 2 374 ? ? ? A . n A 1 3 LEU 3 375 ? ? ? A . n A 1 4 GLY 4 376 ? ? ? A . n A 1 5 SER 5 377 377 SER SER A . n A 1 6 PRO 6 378 378 PRO PRO A . n A 1 7 PHE 7 379 379 PHE PHE A . n A 1 8 GLN 8 380 380 GLN GLN A . n A 1 9 CYS 9 381 381 CYS CYS A . n A 1 10 SER 10 382 382 SER SER A . n A 1 11 LEU 11 383 383 LEU LEU A . n A 1 12 CYS 12 384 384 CYS CYS A . n A 1 13 SER 13 385 385 SER SER A . n A 1 14 TYR 14 386 386 TYR TYR A . n A 1 15 ALA 15 387 387 ALA ALA A . n A 1 16 SER 16 388 388 SER SER A . n A 1 17 ARG 17 389 389 ARG ARG A . n A 1 18 ASP 18 390 390 ASP ASP A . n A 1 19 THR 19 391 391 THR THR A . n A 1 20 TYR 20 392 392 TYR TYR A . n A 1 21 LYS 21 393 393 LYS LYS A . n A 1 22 LEU 22 394 394 LEU LEU A . n A 1 23 LYS 23 395 395 LYS LYS A . n A 1 24 ARG 24 396 396 ARG ARG A . n A 1 25 HIS 25 397 397 HIS HIS A . n A 1 26 MET 26 398 398 MET MET A . n A 1 27 ARG 27 399 399 ARG ARG A . n A 1 28 THR 28 400 400 THR THR A . n A 1 29 HIS 29 401 401 HIS HIS A . n A 1 30 SER 30 402 402 SER SER A . n A 1 31 GLY 31 403 403 GLY GLY A . n A 1 32 GLU 32 404 404 GLU GLU A . n A 1 33 LYS 33 405 405 LYS LYS A . n A 1 34 PRO 34 406 406 PRO PRO A . n A 1 35 TYR 35 407 407 TYR TYR A . n A 1 36 GLU 36 408 408 GLU GLU A . n A 1 37 CYS 37 409 409 CYS CYS A . n A 1 38 TYR 38 410 410 TYR TYR A . n A 1 39 ILE 39 411 411 ILE ILE A . n A 1 40 CYS 40 412 412 CYS CYS A . n A 1 41 HIS 41 413 413 HIS HIS A . n A 1 42 ALA 42 414 414 ALA ALA A . n A 1 43 ARG 43 415 415 ARG ARG A . n A 1 44 PHE 44 416 416 PHE PHE A . n A 1 45 THR 45 417 417 THR THR A . n A 1 46 GLN 46 418 418 GLN GLN A . n A 1 47 SER 47 419 419 SER SER A . n A 1 48 GLY 48 420 420 GLY GLY A . n A 1 49 THR 49 421 421 THR THR A . n A 1 50 MET 50 422 422 MET MET A . n A 1 51 LYS 51 423 423 LYS LYS A . n A 1 52 MET 52 424 424 MET MET A . n A 1 53 HIS 53 425 425 HIS HIS A . n A 1 54 ILE 54 426 426 ILE ILE A . n A 1 55 LEU 55 427 427 LEU LEU A . n A 1 56 GLN 56 428 428 GLN GLN A . n A 1 57 LYS 57 429 429 LYS LYS A . n A 1 58 HIS 58 430 430 HIS HIS A . n A 1 59 THR 59 431 431 THR THR A . n A 1 60 GLU 60 432 432 GLU GLU A . n A 1 61 ASN 61 433 433 ASN ASN A . n A 1 62 VAL 62 434 434 VAL VAL A . n A 1 63 ALA 63 435 435 ALA ALA A . n A 1 64 LYS 64 436 436 LYS LYS A . n A 1 65 PHE 65 437 437 PHE PHE A . n A 1 66 HIS 66 438 438 HIS HIS A . n A 1 67 CYS 67 439 439 CYS CYS A . n A 1 68 PRO 68 440 440 PRO PRO A . n A 1 69 HIS 69 441 441 HIS HIS A . n A 1 70 CYS 70 442 442 CYS CYS A . n A 1 71 ASP 71 443 443 ASP ASP A . n A 1 72 THR 72 444 444 THR THR A . n A 1 73 VAL 73 445 445 VAL VAL A . n A 1 74 ILE 74 446 446 ILE ILE A . n A 1 75 ALA 75 447 447 ALA ALA A . n A 1 76 ARG 76 448 448 ARG ARG A . n A 1 77 LYS 77 449 449 LYS LYS A . n A 1 78 SER 78 450 450 SER SER A . n A 1 79 ASP 79 451 451 ASP ASP A . n A 1 80 LEU 80 452 452 LEU LEU A . n A 1 81 GLY 81 453 453 GLY GLY A . n A 1 82 VAL 82 454 454 VAL VAL A . n A 1 83 HIS 83 455 455 HIS HIS A . n A 1 84 LEU 84 456 456 LEU LEU A . n A 1 85 ARG 85 457 457 ARG ARG A . n A 1 86 LYS 86 458 458 LYS LYS A . n A 1 87 GLN 87 459 459 GLN GLN A . n A 1 88 HIS 88 460 460 HIS HIS A . n A 1 89 SER 89 461 461 SER SER A . n A 1 90 TYR 90 462 462 TYR TYR A . n A 1 91 ILE 91 463 463 ILE ILE A . n A 1 92 GLU 92 464 464 GLU GLU A . n A 1 93 GLN 93 465 465 GLN GLN A . n A 1 94 GLY 94 466 466 GLY GLY A . n A 1 95 LYS 95 467 467 LYS LYS A . n A 1 96 LYS 96 468 468 LYS LYS A . n A 1 97 CYS 97 469 469 CYS CYS A . n A 1 98 ARG 98 470 470 ARG ARG A . n A 1 99 TYR 99 471 471 TYR TYR A . n A 1 100 CYS 100 472 472 CYS CYS A . n A 1 101 ASP 101 473 473 ASP ASP A . n A 1 102 ALA 102 474 474 ALA ALA A . n A 1 103 VAL 103 475 475 VAL VAL A . n A 1 104 PHE 104 476 476 PHE PHE A . n A 1 105 HIS 105 477 477 HIS HIS A . n A 1 106 GLU 106 478 478 GLU GLU A . n A 1 107 ARG 107 479 479 ARG ARG A . n A 1 108 TYR 108 480 480 TYR TYR A . n A 1 109 ALA 109 481 481 ALA ALA A . n A 1 110 LEU 110 482 482 LEU LEU A . n A 1 111 ILE 111 483 483 ILE ILE A . n A 1 112 GLN 112 484 484 GLN GLN A . n A 1 113 HIS 113 485 485 HIS HIS A . n A 1 114 GLN 114 486 486 GLN GLN A . n A 1 115 LYS 115 487 487 LYS LYS A . n A 1 116 SER 116 488 488 SER SER A . n A 1 117 HIS 117 489 489 HIS HIS A . n B 2 1 DC 1 1 1 DC DC B . n B 2 2 DC 2 2 2 DC DC B . n B 2 3 DC 3 3 3 DC DC B . n B 2 4 DT 4 4 4 DT DT B . n B 2 5 DG 5 5 5 DG DG B . n B 2 6 DC 6 6 6 DC DC B . n B 2 7 DT 7 7 7 DT DT B . n B 2 8 DG 8 8 8 DG DG B . n B 2 9 DG 9 9 9 DG DG B . n B 2 10 DC 10 10 10 DC DC B . n B 2 11 DA 11 11 11 DA DA B . n B 2 12 DC 12 12 12 DC DC B . n B 2 13 DC 13 13 13 DC DC B . n C 3 1 DG 1 1 1 DG DG C . n C 3 2 DT 2 2 2 DT DT C . n C 3 3 DG 3 3 3 DG DG C . n C 3 4 DC 4 4 4 DC DC C . n C 3 5 DC 5 5 5 DC DC C . n C 3 6 DA 6 6 6 DA DA C . n C 3 7 DG 7 7 7 DG DG C . n C 3 8 DC 8 8 8 DC DC C . n C 3 9 DA 9 9 9 DA DA C . n C 3 10 DG 10 10 10 DG DG C . n C 3 11 DG 11 11 11 DG DG C . n C 3 12 DG 12 12 12 DG DG C . n C 3 13 DG 13 13 13 DG DG C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN 1 501 1 ZN ZN A . E 4 ZN 1 502 2 ZN ZN A . F 4 ZN 1 503 3 ZN ZN A . G 4 ZN 1 504 4 ZN ZN A . H 5 SO4 1 505 1 SO4 SO4 A . I 4 ZN 1 506 1 ZN ZN A . J 6 HOH 1 601 2 HOH HOH A . J 6 HOH 2 602 1 HOH HOH A . J 6 HOH 3 603 3 HOH HOH A . J 6 HOH 4 604 10 HOH HOH A . J 6 HOH 5 605 8 HOH HOH A . J 6 HOH 6 606 9 HOH HOH A . K 6 HOH 1 101 4 HOH HOH B . K 6 HOH 2 102 5 HOH HOH B . K 6 HOH 3 103 6 HOH HOH B . L 6 HOH 1 101 7 HOH HOH C . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(dev_2400: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? AutoSol ? ? ? . 4 # _cell.entry_id 5K5I _cell.length_a 45.075 _cell.length_b 45.075 _cell.length_c 260.450 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5K5I _symmetry.space_group_name_H-M 'P 65' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5K5I _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.52 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 65.10 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20% (w/v) polyethylene glycol 3350, 0.2 M ammonium sulfate, 0.1 M sodium cacodylate pH 6.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX300-HS' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-02-09 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si (1 1 1)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.27046 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.27046 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5K5I _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.19 _reflns.d_resolution_low 23.247 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 30205 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.percent_possible_obs 99.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 14.2 _reflns.pdbx_Rmerge_I_obs 0.105 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 19.290 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.806 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.19 _reflns_shell.d_res_low 2.27 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.333 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 99.7 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.674 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 6.5 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5K5I _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 30205 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.43 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 23.247 _refine.ls_d_res_high 2.19 _refine.ls_percent_reflns_obs 96.91 _refine.ls_R_factor_obs 0.2198 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2185 _refine.ls_R_factor_R_free 0.2447 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.90 _refine.ls_number_reflns_R_free 1480 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.35 _refine.pdbx_overall_phase_error 29.75 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 934 _refine_hist.pdbx_number_atoms_nucleic_acid 527 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 10 _refine_hist.number_atoms_total 1481 _refine_hist.d_res_high 2.19 _refine_hist.d_res_low 23.247 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.004 ? ? 1572 'X-RAY DIFFRACTION' ? f_angle_d 0.448 ? ? 2197 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 21.612 ? ? 614 'X-RAY DIFFRACTION' ? f_chiral_restr 0.031 ? ? 232 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 189 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.1726 2.2426 2086 0.3553 77.00 0.3965 . . 110 . . . . 'X-RAY DIFFRACTION' . 2.2426 2.3227 2580 0.3387 97.00 0.3175 . . 143 . . . . 'X-RAY DIFFRACTION' . 2.3227 2.4156 2617 0.3172 98.00 0.3916 . . 147 . . . . 'X-RAY DIFFRACTION' . 2.4156 2.5254 2715 0.3043 98.00 0.3433 . . 129 . . . . 'X-RAY DIFFRACTION' . 2.5254 2.6584 2680 0.3038 99.00 0.3038 . . 144 . . . . 'X-RAY DIFFRACTION' . 2.6584 2.8247 2664 0.2870 99.00 0.3198 . . 135 . . . . 'X-RAY DIFFRACTION' . 2.8247 3.0424 2682 0.3096 100.00 0.3248 . . 136 . . . . 'X-RAY DIFFRACTION' . 3.0424 3.3477 2664 0.2530 100.00 0.2978 . . 135 . . . . 'X-RAY DIFFRACTION' . 3.3477 3.8303 2729 0.1979 100.00 0.2674 . . 128 . . . . 'X-RAY DIFFRACTION' . 3.8303 4.8187 2688 0.1836 100.00 0.2413 . . 133 . . . . 'X-RAY DIFFRACTION' . 4.8187 23.2487 2620 0.1602 97.00 0.1337 . . 140 . . . . # _struct.entry_id 5K5I _struct.title 'Homo sapiens CCCTC-binding factor (CTCF) ZnF5-8 and DNA complex structure in space group P65' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5K5I _struct_keywords.text 'CCCTC-binding factor, CTCF, zinc finger, TRANSCRIPTION-DNA complex' _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 5 ? I N N 4 ? J N N 6 ? K N N 6 ? L N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP CTCF_HUMAN P49711 ? 1 ;PFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLR KQHSYIEQGKKCRYCDAVFHERYALIQHQKSH ; 378 2 PDB 5K5I 5K5I ? 2 ? 1 3 PDB 5K5I 5K5I ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5K5I A 6 ? 117 ? P49711 378 ? 489 ? 378 489 2 2 5K5I B 1 ? 13 ? 5K5I 1 ? 13 ? 1 13 3 3 5K5I C 1 ? 13 ? 5K5I 1 ? 13 ? 1 13 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5K5I GLY A 1 ? UNP P49711 ? ? 'expression tag' 373 1 1 5K5I PRO A 2 ? UNP P49711 ? ? 'expression tag' 374 2 1 5K5I LEU A 3 ? UNP P49711 ? ? 'expression tag' 375 3 1 5K5I GLY A 4 ? UNP P49711 ? ? 'expression tag' 376 4 1 5K5I SER A 5 ? UNP P49711 ? ? 'expression tag' 377 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4090 ? 1 MORE -66 ? 1 'SSA (A^2)' 11090 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 18 ? MET A 26 ? ASP A 390 MET A 398 1 ? 9 HELX_P HELX_P2 AA2 MET A 26 ? GLY A 31 ? MET A 398 GLY A 403 1 ? 6 HELX_P HELX_P3 AA3 GLN A 46 ? HIS A 58 ? GLN A 418 HIS A 430 1 ? 13 HELX_P HELX_P4 AA4 ARG A 76 ? HIS A 88 ? ARG A 448 HIS A 460 1 ? 13 HELX_P HELX_P5 AA5 GLU A 106 ? SER A 116 ? GLU A 478 SER A 488 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 9 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 381 A ZN 501 1_555 ? ? ? ? ? ? ? 2.331 ? ? metalc2 metalc ? ? A CYS 12 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 384 A ZN 501 1_555 ? ? ? ? ? ? ? 2.266 ? ? metalc3 metalc ? ? A HIS 25 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 397 A ZN 501 1_555 ? ? ? ? ? ? ? 2.038 ? ? metalc4 metalc ? ? A HIS 29 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 401 A ZN 501 1_555 ? ? ? ? ? ? ? 2.023 ? ? metalc5 metalc ? ? A GLU 36 OE2 ? ? ? 1_555 I ZN . ZN ? ? A GLU 408 A ZN 506 5_555 ? ? ? ? ? ? ? 1.995 ? ? metalc6 metalc ? ? A CYS 37 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 409 A ZN 502 1_555 ? ? ? ? ? ? ? 2.314 ? ? metalc7 metalc ? ? A CYS 40 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 412 A ZN 502 1_555 ? ? ? ? ? ? ? 2.306 ? ? metalc8 metalc ? ? A HIS 41 ND1 ? ? ? 1_555 I ZN . ZN ? ? A HIS 413 A ZN 506 5_555 ? ? ? ? ? ? ? 2.030 ? ? metalc9 metalc ? ? A HIS 53 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 425 A ZN 502 1_555 ? ? ? ? ? ? ? 2.041 ? ? metalc10 metalc ? ? A HIS 58 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 430 A ZN 502 1_555 ? ? ? ? ? ? ? 2.029 ? ? metalc11 metalc ? ? A CYS 67 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 439 A ZN 503 1_555 ? ? ? ? ? ? ? 2.239 ? ? metalc12 metalc ? ? A HIS 69 NE2 ? ? ? 1_555 I ZN . ZN ? ? A HIS 441 A ZN 506 1_555 ? ? ? ? ? ? ? 2.064 ? ? metalc13 metalc ? ? A CYS 70 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 442 A ZN 503 1_555 ? ? ? ? ? ? ? 2.283 ? ? metalc14 metalc ? ? A HIS 83 NE2 ? ? ? 1_555 F ZN . ZN ? ? A HIS 455 A ZN 503 1_555 ? ? ? ? ? ? ? 2.039 ? ? metalc15 metalc ? ? A HIS 88 NE2 ? ? ? 1_555 F ZN . ZN ? ? A HIS 460 A ZN 503 1_555 ? ? ? ? ? ? ? 2.011 ? ? metalc16 metalc ? ? A CYS 97 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 469 A ZN 504 1_555 ? ? ? ? ? ? ? 2.329 ? ? metalc17 metalc ? ? A CYS 100 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 472 A ZN 504 1_555 ? ? ? ? ? ? ? 2.296 ? ? metalc18 metalc ? ? A GLU 106 OE1 ? ? ? 1_555 I ZN . ZN ? ? A GLU 478 A ZN 506 1_555 ? ? ? ? ? ? ? 2.007 ? ? metalc19 metalc ? ? A GLU 106 OE2 ? ? ? 1_555 I ZN . ZN ? ? A GLU 478 A ZN 506 1_555 ? ? ? ? ? ? ? 2.000 ? ? metalc20 metalc ? ? A HIS 113 NE2 ? ? ? 1_555 G ZN . ZN ? ? A HIS 485 A ZN 504 1_555 ? ? ? ? ? ? ? 2.041 ? ? metalc21 metalc ? ? A HIS 117 NE2 ? ? ? 1_555 G ZN . ZN ? ? A HIS 489 A ZN 504 1_555 ? ? ? ? ? ? ? 2.035 ? ? hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 C DG 12 N1 ? ? B DC 1 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 C DG 12 O6 ? ? B DC 1 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 C DG 12 N2 ? ? B DC 1 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 2 N3 ? ? ? 1_555 C DG 11 N1 ? ? B DC 2 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 2 N4 ? ? ? 1_555 C DG 11 O6 ? ? B DC 2 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 2 O2 ? ? ? 1_555 C DG 11 N2 ? ? B DC 2 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 3 N3 ? ? ? 1_555 C DG 10 N1 ? ? B DC 3 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 3 N4 ? ? ? 1_555 C DG 10 O6 ? ? B DC 3 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 3 O2 ? ? ? 1_555 C DG 10 N2 ? ? B DC 3 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 9 N1 ? ? B DT 4 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 9 N6 ? ? B DT 4 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DG 5 N1 ? ? ? 1_555 C DC 8 N3 ? ? B DG 5 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 5 N2 ? ? ? 1_555 C DC 8 O2 ? ? B DG 5 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DG 5 O6 ? ? ? 1_555 C DC 8 N4 ? ? B DG 5 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 6 N3 ? ? ? 1_555 C DG 7 N1 ? ? B DC 6 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 6 N4 ? ? ? 1_555 C DG 7 O6 ? ? B DC 6 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 6 O2 ? ? ? 1_555 C DG 7 N2 ? ? B DC 6 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 6 N1 ? ? B DT 7 C DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 6 N6 ? ? B DT 7 C DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 5 N3 ? ? B DG 8 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 5 O2 ? ? B DG 8 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 5 N4 ? ? B DG 8 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DG 9 N1 ? ? ? 1_555 C DC 4 N3 ? ? B DG 9 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DG 9 N2 ? ? ? 1_555 C DC 4 O2 ? ? B DG 9 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DG 9 O6 ? ? ? 1_555 C DC 4 N4 ? ? B DG 9 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DC 10 N3 ? ? ? 1_555 C DG 3 N1 ? ? B DC 10 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DC 10 N4 ? ? ? 1_555 C DG 3 O6 ? ? B DC 10 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DC 10 O2 ? ? ? 1_555 C DG 3 N2 ? ? B DC 10 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DA 11 N1 ? ? ? 1_555 C DT 2 N3 ? ? B DA 11 C DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DA 11 N6 ? ? ? 1_555 C DT 2 O4 ? ? B DA 11 C DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DC 12 N3 ? ? ? 1_555 C DG 1 N1 ? ? B DC 12 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DC 12 N4 ? ? ? 1_555 C DG 1 O6 ? ? B DC 12 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DC 12 O2 ? ? ? 1_555 C DG 1 N2 ? ? B DC 12 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 9 ? A CYS 381 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 SG ? A CYS 12 ? A CYS 384 ? 1_555 106.1 ? 2 SG ? A CYS 9 ? A CYS 381 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 25 ? A HIS 397 ? 1_555 112.6 ? 3 SG ? A CYS 12 ? A CYS 384 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 25 ? A HIS 397 ? 1_555 87.1 ? 4 SG ? A CYS 9 ? A CYS 381 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 29 ? A HIS 401 ? 1_555 119.9 ? 5 SG ? A CYS 12 ? A CYS 384 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 29 ? A HIS 401 ? 1_555 111.3 ? 6 NE2 ? A HIS 25 ? A HIS 397 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 29 ? A HIS 401 ? 1_555 114.6 ? 7 OE2 ? A GLU 36 ? A GLU 408 ? 1_555 ZN ? I ZN . ? A ZN 506 ? 5_555 ND1 ? A HIS 41 ? A HIS 413 ? 1_555 101.6 ? 8 OE2 ? A GLU 36 ? A GLU 408 ? 1_555 ZN ? I ZN . ? A ZN 506 ? 5_555 NE2 ? A HIS 69 ? A HIS 441 ? 1_555 64.1 ? 9 ND1 ? A HIS 41 ? A HIS 413 ? 1_555 ZN ? I ZN . ? A ZN 506 ? 5_555 NE2 ? A HIS 69 ? A HIS 441 ? 1_555 81.8 ? 10 OE2 ? A GLU 36 ? A GLU 408 ? 1_555 ZN ? I ZN . ? A ZN 506 ? 5_555 OE1 ? A GLU 106 ? A GLU 478 ? 1_555 64.9 ? 11 ND1 ? A HIS 41 ? A HIS 413 ? 1_555 ZN ? I ZN . ? A ZN 506 ? 5_555 OE1 ? A GLU 106 ? A GLU 478 ? 1_555 84.8 ? 12 NE2 ? A HIS 69 ? A HIS 441 ? 1_555 ZN ? I ZN . ? A ZN 506 ? 5_555 OE1 ? A GLU 106 ? A GLU 478 ? 1_555 3.4 ? 13 OE2 ? A GLU 36 ? A GLU 408 ? 1_555 ZN ? I ZN . ? A ZN 506 ? 5_555 OE2 ? A GLU 106 ? A GLU 478 ? 1_555 62.2 ? 14 ND1 ? A HIS 41 ? A HIS 413 ? 1_555 ZN ? I ZN . ? A ZN 506 ? 5_555 OE2 ? A GLU 106 ? A GLU 478 ? 1_555 85.2 ? 15 NE2 ? A HIS 69 ? A HIS 441 ? 1_555 ZN ? I ZN . ? A ZN 506 ? 5_555 OE2 ? A GLU 106 ? A GLU 478 ? 1_555 3.6 ? 16 OE1 ? A GLU 106 ? A GLU 478 ? 1_555 ZN ? I ZN . ? A ZN 506 ? 5_555 OE2 ? A GLU 106 ? A GLU 478 ? 1_555 2.7 ? 17 SG ? A CYS 37 ? A CYS 409 ? 1_555 ZN ? E ZN . ? A ZN 502 ? 1_555 SG ? A CYS 40 ? A CYS 412 ? 1_555 116.7 ? 18 SG ? A CYS 37 ? A CYS 409 ? 1_555 ZN ? E ZN . ? A ZN 502 ? 1_555 NE2 ? A HIS 53 ? A HIS 425 ? 1_555 115.4 ? 19 SG ? A CYS 40 ? A CYS 412 ? 1_555 ZN ? E ZN . ? A ZN 502 ? 1_555 NE2 ? A HIS 53 ? A HIS 425 ? 1_555 100.5 ? 20 SG ? A CYS 37 ? A CYS 409 ? 1_555 ZN ? E ZN . ? A ZN 502 ? 1_555 NE2 ? A HIS 58 ? A HIS 430 ? 1_555 106.8 ? 21 SG ? A CYS 40 ? A CYS 412 ? 1_555 ZN ? E ZN . ? A ZN 502 ? 1_555 NE2 ? A HIS 58 ? A HIS 430 ? 1_555 107.9 ? 22 NE2 ? A HIS 53 ? A HIS 425 ? 1_555 ZN ? E ZN . ? A ZN 502 ? 1_555 NE2 ? A HIS 58 ? A HIS 430 ? 1_555 109.1 ? 23 SG ? A CYS 67 ? A CYS 439 ? 1_555 ZN ? F ZN . ? A ZN 503 ? 1_555 SG ? A CYS 70 ? A CYS 442 ? 1_555 114.4 ? 24 SG ? A CYS 67 ? A CYS 439 ? 1_555 ZN ? F ZN . ? A ZN 503 ? 1_555 NE2 ? A HIS 83 ? A HIS 455 ? 1_555 117.6 ? 25 SG ? A CYS 70 ? A CYS 442 ? 1_555 ZN ? F ZN . ? A ZN 503 ? 1_555 NE2 ? A HIS 83 ? A HIS 455 ? 1_555 104.1 ? 26 SG ? A CYS 67 ? A CYS 439 ? 1_555 ZN ? F ZN . ? A ZN 503 ? 1_555 NE2 ? A HIS 88 ? A HIS 460 ? 1_555 106.9 ? 27 SG ? A CYS 70 ? A CYS 442 ? 1_555 ZN ? F ZN . ? A ZN 503 ? 1_555 NE2 ? A HIS 88 ? A HIS 460 ? 1_555 112.4 ? 28 NE2 ? A HIS 83 ? A HIS 455 ? 1_555 ZN ? F ZN . ? A ZN 503 ? 1_555 NE2 ? A HIS 88 ? A HIS 460 ? 1_555 100.8 ? 29 SG ? A CYS 97 ? A CYS 469 ? 1_555 ZN ? G ZN . ? A ZN 504 ? 1_555 SG ? A CYS 100 ? A CYS 472 ? 1_555 101.7 ? 30 SG ? A CYS 97 ? A CYS 469 ? 1_555 ZN ? G ZN . ? A ZN 504 ? 1_555 NE2 ? A HIS 113 ? A HIS 485 ? 1_555 121.3 ? 31 SG ? A CYS 100 ? A CYS 472 ? 1_555 ZN ? G ZN . ? A ZN 504 ? 1_555 NE2 ? A HIS 113 ? A HIS 485 ? 1_555 91.2 ? 32 SG ? A CYS 97 ? A CYS 469 ? 1_555 ZN ? G ZN . ? A ZN 504 ? 1_555 NE2 ? A HIS 117 ? A HIS 489 ? 1_555 123.3 ? 33 SG ? A CYS 100 ? A CYS 472 ? 1_555 ZN ? G ZN . ? A ZN 504 ? 1_555 NE2 ? A HIS 117 ? A HIS 489 ? 1_555 108.6 ? 34 NE2 ? A HIS 113 ? A HIS 485 ? 1_555 ZN ? G ZN . ? A ZN 504 ? 1_555 NE2 ? A HIS 117 ? A HIS 489 ? 1_555 105.0 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 7 ? GLN A 8 ? PHE A 379 GLN A 380 AA1 2 ALA A 15 ? SER A 16 ? ALA A 387 SER A 388 AA2 1 TYR A 35 ? GLU A 36 ? TYR A 407 GLU A 408 AA2 2 ARG A 43 ? PHE A 44 ? ARG A 415 PHE A 416 AA3 1 PHE A 65 ? HIS A 66 ? PHE A 437 HIS A 438 AA3 2 VAL A 73 ? ILE A 74 ? VAL A 445 ILE A 446 AA4 1 LYS A 95 ? LYS A 96 ? LYS A 467 LYS A 468 AA4 2 VAL A 103 ? PHE A 104 ? VAL A 475 PHE A 476 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE A 7 ? N PHE A 379 O SER A 16 ? O SER A 388 AA2 1 2 N TYR A 35 ? N TYR A 407 O PHE A 44 ? O PHE A 416 AA3 1 2 N PHE A 65 ? N PHE A 437 O ILE A 74 ? O ILE A 446 AA4 1 2 N LYS A 95 ? N LYS A 467 O PHE A 104 ? O PHE A 476 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 501 ? 4 'binding site for residue ZN A 501' AC2 Software A ZN 502 ? 4 'binding site for residue ZN A 502' AC3 Software A ZN 503 ? 4 'binding site for residue ZN A 503' AC4 Software A ZN 504 ? 4 'binding site for residue ZN A 504' AC5 Software A SO4 505 ? 6 'binding site for residue SO4 A 505' AC6 Software A ZN 506 ? 4 'binding site for residue ZN A 506' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 9 ? CYS A 381 . ? 1_555 ? 2 AC1 4 CYS A 12 ? CYS A 384 . ? 1_555 ? 3 AC1 4 HIS A 25 ? HIS A 397 . ? 1_555 ? 4 AC1 4 HIS A 29 ? HIS A 401 . ? 1_555 ? 5 AC2 4 CYS A 37 ? CYS A 409 . ? 1_555 ? 6 AC2 4 CYS A 40 ? CYS A 412 . ? 1_555 ? 7 AC2 4 HIS A 53 ? HIS A 425 . ? 1_555 ? 8 AC2 4 HIS A 58 ? HIS A 430 . ? 1_555 ? 9 AC3 4 CYS A 67 ? CYS A 439 . ? 1_555 ? 10 AC3 4 CYS A 70 ? CYS A 442 . ? 1_555 ? 11 AC3 4 HIS A 83 ? HIS A 455 . ? 1_555 ? 12 AC3 4 HIS A 88 ? HIS A 460 . ? 1_555 ? 13 AC4 4 CYS A 97 ? CYS A 469 . ? 1_555 ? 14 AC4 4 CYS A 100 ? CYS A 472 . ? 1_555 ? 15 AC4 4 HIS A 113 ? HIS A 485 . ? 1_555 ? 16 AC4 4 HIS A 117 ? HIS A 489 . ? 1_555 ? 17 AC5 6 TYR A 20 ? TYR A 392 . ? 1_555 ? 18 AC5 6 ARG A 24 ? ARG A 396 . ? 1_555 ? 19 AC5 6 ARG A 27 ? ARG A 399 . ? 1_555 ? 20 AC5 6 TYR A 35 ? TYR A 407 . ? 1_555 ? 21 AC5 6 GLN A 46 ? GLN A 418 . ? 1_555 ? 22 AC5 6 SER A 47 ? SER A 419 . ? 1_555 ? 23 AC6 4 GLU A 36 ? GLU A 408 . ? 6_554 ? 24 AC6 4 HIS A 41 ? HIS A 413 . ? 6_554 ? 25 AC6 4 HIS A 69 ? HIS A 441 . ? 1_555 ? 26 AC6 4 GLU A 106 ? GLU A 478 . ? 1_555 ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 373 ? A GLY 1 2 1 Y 1 A PRO 374 ? A PRO 2 3 1 Y 1 A LEU 375 ? A LEU 3 4 1 Y 1 A GLY 376 ? A GLY 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PHE N N N N 393 PHE CA C N S 394 PHE C C N N 395 PHE O O N N 396 PHE CB C N N 397 PHE CG C Y N 398 PHE CD1 C Y N 399 PHE CD2 C Y N 400 PHE CE1 C Y N 401 PHE CE2 C Y N 402 PHE CZ C Y N 403 PHE OXT O N N 404 PHE H H N N 405 PHE H2 H N N 406 PHE HA H N N 407 PHE HB2 H N N 408 PHE HB3 H N N 409 PHE HD1 H N N 410 PHE HD2 H N N 411 PHE HE1 H N N 412 PHE HE2 H N N 413 PHE HZ H N N 414 PHE HXT H N N 415 PRO N N N N 416 PRO CA C N S 417 PRO C C N N 418 PRO O O N N 419 PRO CB C N N 420 PRO CG C N N 421 PRO CD C N N 422 PRO OXT O N N 423 PRO H H N N 424 PRO HA H N N 425 PRO HB2 H N N 426 PRO HB3 H N N 427 PRO HG2 H N N 428 PRO HG3 H N N 429 PRO HD2 H N N 430 PRO HD3 H N N 431 PRO HXT H N N 432 SER N N N N 433 SER CA C N S 434 SER C C N N 435 SER O O N N 436 SER CB C N N 437 SER OG O N N 438 SER OXT O N N 439 SER H H N N 440 SER H2 H N N 441 SER HA H N N 442 SER HB2 H N N 443 SER HB3 H N N 444 SER HG H N N 445 SER HXT H N N 446 SO4 S S N N 447 SO4 O1 O N N 448 SO4 O2 O N N 449 SO4 O3 O N N 450 SO4 O4 O N N 451 THR N N N N 452 THR CA C N S 453 THR C C N N 454 THR O O N N 455 THR CB C N R 456 THR OG1 O N N 457 THR CG2 C N N 458 THR OXT O N N 459 THR H H N N 460 THR H2 H N N 461 THR HA H N N 462 THR HB H N N 463 THR HG1 H N N 464 THR HG21 H N N 465 THR HG22 H N N 466 THR HG23 H N N 467 THR HXT H N N 468 TYR N N N N 469 TYR CA C N S 470 TYR C C N N 471 TYR O O N N 472 TYR CB C N N 473 TYR CG C Y N 474 TYR CD1 C Y N 475 TYR CD2 C Y N 476 TYR CE1 C Y N 477 TYR CE2 C Y N 478 TYR CZ C Y N 479 TYR OH O N N 480 TYR OXT O N N 481 TYR H H N N 482 TYR H2 H N N 483 TYR HA H N N 484 TYR HB2 H N N 485 TYR HB3 H N N 486 TYR HD1 H N N 487 TYR HD2 H N N 488 TYR HE1 H N N 489 TYR HE2 H N N 490 TYR HH H N N 491 TYR HXT H N N 492 VAL N N N N 493 VAL CA C N S 494 VAL C C N N 495 VAL O O N N 496 VAL CB C N N 497 VAL CG1 C N N 498 VAL CG2 C N N 499 VAL OXT O N N 500 VAL H H N N 501 VAL H2 H N N 502 VAL HA H N N 503 VAL HB H N N 504 VAL HG11 H N N 505 VAL HG12 H N N 506 VAL HG13 H N N 507 VAL HG21 H N N 508 VAL HG22 H N N 509 VAL HG23 H N N 510 VAL HXT H N N 511 ZN ZN ZN N N 512 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 SO4 S O1 doub N N 439 SO4 S O2 doub N N 440 SO4 S O3 sing N N 441 SO4 S O4 sing N N 442 THR N CA sing N N 443 THR N H sing N N 444 THR N H2 sing N N 445 THR CA C sing N N 446 THR CA CB sing N N 447 THR CA HA sing N N 448 THR C O doub N N 449 THR C OXT sing N N 450 THR CB OG1 sing N N 451 THR CB CG2 sing N N 452 THR CB HB sing N N 453 THR OG1 HG1 sing N N 454 THR CG2 HG21 sing N N 455 THR CG2 HG22 sing N N 456 THR CG2 HG23 sing N N 457 THR OXT HXT sing N N 458 TYR N CA sing N N 459 TYR N H sing N N 460 TYR N H2 sing N N 461 TYR CA C sing N N 462 TYR CA CB sing N N 463 TYR CA HA sing N N 464 TYR C O doub N N 465 TYR C OXT sing N N 466 TYR CB CG sing N N 467 TYR CB HB2 sing N N 468 TYR CB HB3 sing N N 469 TYR CG CD1 doub Y N 470 TYR CG CD2 sing Y N 471 TYR CD1 CE1 sing Y N 472 TYR CD1 HD1 sing N N 473 TYR CD2 CE2 doub Y N 474 TYR CD2 HD2 sing N N 475 TYR CE1 CZ doub Y N 476 TYR CE1 HE1 sing N N 477 TYR CE2 CZ sing Y N 478 TYR CE2 HE2 sing N N 479 TYR CZ OH sing N N 480 TYR OH HH sing N N 481 TYR OXT HXT sing N N 482 VAL N CA sing N N 483 VAL N H sing N N 484 VAL N H2 sing N N 485 VAL CA C sing N N 486 VAL CA CB sing N N 487 VAL CA HA sing N N 488 VAL C O doub N N 489 VAL C OXT sing N N 490 VAL CB CG1 sing N N 491 VAL CB CG2 sing N N 492 VAL CB HB sing N N 493 VAL CG1 HG11 sing N N 494 VAL CG1 HG12 sing N N 495 VAL CG1 HG13 sing N N 496 VAL CG2 HG21 sing N N 497 VAL CG2 HG22 sing N N 498 VAL CG2 HG23 sing N N 499 VAL OXT HXT sing N N 500 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5K5I 'double helix' 5K5I 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 C DG 12 1_555 0.438 0.014 0.719 -26.418 19.033 4.844 1 B_DC1:DG12_C B 1 ? C 12 ? 19 1 1 B DC 2 1_555 C DG 11 1_555 0.072 -0.118 0.591 -0.045 -16.418 -4.639 2 B_DC2:DG11_C B 2 ? C 11 ? 19 1 1 B DC 3 1_555 C DG 10 1_555 0.157 -0.235 0.785 -7.365 -9.351 -3.642 3 B_DC3:DG10_C B 3 ? C 10 ? 19 1 1 B DT 4 1_555 C DA 9 1_555 -0.223 -0.062 0.215 -6.686 -7.339 -0.128 4 B_DT4:DA9_C B 4 ? C 9 ? 20 1 1 B DG 5 1_555 C DC 8 1_555 -0.512 -0.100 0.067 9.671 -5.954 4.303 5 B_DG5:DC8_C B 5 ? C 8 ? 19 1 1 B DC 6 1_555 C DG 7 1_555 0.012 -0.201 0.276 0.453 -14.466 0.828 6 B_DC6:DG7_C B 6 ? C 7 ? 19 1 1 B DT 7 1_555 C DA 6 1_555 -0.374 -0.278 0.435 -13.033 -14.220 -5.627 7 B_DT7:DA6_C B 7 ? C 6 ? 20 1 1 B DG 8 1_555 C DC 5 1_555 -0.034 -0.093 0.374 12.462 -8.388 2.435 8 B_DG8:DC5_C B 8 ? C 5 ? 19 1 1 B DG 9 1_555 C DC 4 1_555 -0.108 -0.067 0.370 4.444 -17.794 -1.720 9 B_DG9:DC4_C B 9 ? C 4 ? 19 1 1 B DC 10 1_555 C DG 3 1_555 0.628 -0.098 0.101 4.354 -14.738 2.895 10 B_DC10:DG3_C B 10 ? C 3 ? 19 1 1 B DA 11 1_555 C DT 2 1_555 -0.010 0.039 0.688 0.936 -6.496 -2.583 11 B_DA11:DT2_C B 11 ? C 2 ? 20 1 1 B DC 12 1_555 C DG 1 1_555 0.359 -0.007 -0.292 21.271 -2.383 0.740 12 B_DC12:DG1_C B 12 ? C 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 C DG 12 1_555 B DC 2 1_555 C DG 11 1_555 -1.767 0.357 2.985 1.616 -16.410 34.489 2.380 2.886 2.488 -25.923 -2.554 38.120 1 BB_DC1DC2:DG11DG12_CC B 1 ? C 12 ? B 2 ? C 11 ? 1 B DC 2 1_555 C DG 11 1_555 B DC 3 1_555 C DG 10 1_555 0.229 -0.518 3.433 -1.460 0.726 35.688 -0.953 -0.595 3.410 1.183 2.381 35.724 2 BB_DC2DC3:DG10DG11_CC B 2 ? C 11 ? B 3 ? C 10 ? 1 B DC 3 1_555 C DG 10 1_555 B DT 4 1_555 C DA 9 1_555 0.928 -0.532 3.238 6.022 -1.862 33.474 -0.607 -0.607 3.373 -3.197 -10.341 34.046 3 BB_DC3DT4:DA9DG10_CC B 3 ? C 10 ? B 4 ? C 9 ? 1 B DT 4 1_555 C DA 9 1_555 B DG 5 1_555 C DC 8 1_555 0.453 0.182 3.035 0.863 5.744 28.873 -0.791 -0.719 3.025 11.375 -1.708 29.440 4 BB_DT4DG5:DC8DA9_CC B 4 ? C 9 ? B 5 ? C 8 ? 1 B DG 5 1_555 C DC 8 1_555 B DC 6 1_555 C DG 7 1_555 -0.769 -0.853 3.472 -3.779 3.033 34.083 -1.943 0.673 3.448 5.142 6.407 34.416 5 BB_DG5DC6:DG7DC8_CC B 5 ? C 8 ? B 6 ? C 7 ? 1 B DC 6 1_555 C DG 7 1_555 B DT 7 1_555 C DA 6 1_555 -0.388 -0.762 3.657 0.384 -0.104 35.536 -1.231 0.699 3.655 -0.170 -0.630 35.538 6 BB_DC6DT7:DA6DG7_CC B 6 ? C 7 ? B 7 ? C 6 ? 1 B DT 7 1_555 C DA 6 1_555 B DG 8 1_555 C DC 5 1_555 0.352 0.901 2.894 -0.271 3.420 32.228 1.074 -0.674 2.969 6.139 0.486 32.405 7 BB_DT7DG8:DC5DA6_CC B 7 ? C 6 ? B 8 ? C 5 ? 1 B DG 8 1_555 C DC 5 1_555 B DG 9 1_555 C DC 4 1_555 -0.966 0.042 3.433 -3.241 3.371 36.234 -0.428 1.065 3.493 5.393 5.185 36.524 8 BB_DG8DG9:DC4DC5_CC B 8 ? C 5 ? B 9 ? C 4 ? 1 B DG 9 1_555 C DC 4 1_555 B DC 10 1_555 C DG 3 1_555 0.560 -0.202 3.294 4.270 0.709 38.760 -0.389 -0.315 3.330 1.064 -6.410 38.991 9 BB_DG9DC10:DG3DC4_CC B 9 ? C 4 ? B 10 ? C 3 ? 1 B DC 10 1_555 C DG 3 1_555 B DA 11 1_555 C DT 2 1_555 -0.121 1.601 3.518 -3.809 -8.233 41.695 3.059 -0.230 3.160 -11.405 5.276 42.628 10 BB_DC10DA11:DT2DG3_CC B 10 ? C 3 ? B 11 ? C 2 ? 1 B DA 11 1_555 C DT 2 1_555 B DC 12 1_555 C DG 1 1_555 0.758 0.045 2.989 6.371 1.733 32.172 -0.198 -0.317 3.077 3.087 -11.347 32.825 11 BB_DA11DC12:DG1DT2_CC B 11 ? C 2 ? B 12 ? C 1 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM049245 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 5K5I _atom_sites.fract_transf_matrix[1][1] 0.022185 _atom_sites.fract_transf_matrix[1][2] 0.012809 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025617 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003840 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_