data_5K5J # _entry.id 5K5J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5K5J pdb_00005k5j 10.2210/pdb5k5j/pdb WWPDB D_1000221740 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 5K5L PDB . unspecified 5K5I PDB . unspecified 5K5H PDB . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5K5J _pdbx_database_status.recvd_initial_deposition_date 2016-05-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hashimoto, H.' 1 'Cheng, X.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Mol. Cell' _citation.journal_id_ASTM MOCEFL _citation.journal_id_CSD 2168 _citation.journal_id_ISSN 1097-4164 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 66 _citation.language ? _citation.page_first 711 _citation.page_last 720.e3 _citation.title 'Structural Basis for the Versatile and Methylation-Dependent Binding of CTCF to DNA.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.molcel.2017.05.004 _citation.pdbx_database_id_PubMed 28529057 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hashimoto, H.' 1 ? primary 'Wang, D.' 2 ? primary 'Horton, J.R.' 3 ? primary 'Zhang, X.' 4 ? primary 'Corces, V.G.' 5 ? primary 'Cheng, X.' 6 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5K5J _cell.details ? _cell.formula_units_Z ? _cell.length_a 58.903 _cell.length_a_esd ? _cell.length_b 58.903 _cell.length_b_esd ? _cell.length_c 172.264 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5K5J _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcriptional repressor CTCF' 13722.850 1 ? ? 'unp residues 378-489' ? 2 polymer syn ;DNA (5'-D(*CP*CP*CP*TP*GP*CP*TP*GP*GP*CP*AP*AP*C)-3') ; 3912.550 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*TP*TP*GP*CP*CP*AP*GP*CP*AP*GP*GP*GP*G)-3') ; 4032.622 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 4 ? ? ? ? 5 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 6 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 7 water nat water 18.015 29 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '11-zinc finger protein,CCCTC-binding factor,CTCFL paralog' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPLGSPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL GVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSH ; ;GPLGSPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL GVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSH ; A ? 2 polydeoxyribonucleotide no no '(DC)(DC)(DC)(DT)(DG)(DC)(DT)(DG)(DG)(DC)(DA)(DA)(DC)' CCCTGCTGGCAAC B ? 3 polydeoxyribonucleotide no no '(DT)(DT)(DG)(DC)(DC)(DA)(DG)(DC)(DA)(DG)(DG)(DG)(DG)' TTGCCAGCAGGGG C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 PRO n 1 7 PHE n 1 8 GLN n 1 9 CYS n 1 10 SER n 1 11 LEU n 1 12 CYS n 1 13 SER n 1 14 TYR n 1 15 ALA n 1 16 SER n 1 17 ARG n 1 18 ASP n 1 19 THR n 1 20 TYR n 1 21 LYS n 1 22 LEU n 1 23 LYS n 1 24 ARG n 1 25 HIS n 1 26 MET n 1 27 ARG n 1 28 THR n 1 29 HIS n 1 30 SER n 1 31 GLY n 1 32 GLU n 1 33 LYS n 1 34 PRO n 1 35 TYR n 1 36 GLU n 1 37 CYS n 1 38 TYR n 1 39 ILE n 1 40 CYS n 1 41 HIS n 1 42 ALA n 1 43 ARG n 1 44 PHE n 1 45 THR n 1 46 GLN n 1 47 SER n 1 48 GLY n 1 49 THR n 1 50 MET n 1 51 LYS n 1 52 MET n 1 53 HIS n 1 54 ILE n 1 55 LEU n 1 56 GLN n 1 57 LYS n 1 58 HIS n 1 59 THR n 1 60 GLU n 1 61 ASN n 1 62 VAL n 1 63 ALA n 1 64 LYS n 1 65 PHE n 1 66 HIS n 1 67 CYS n 1 68 PRO n 1 69 HIS n 1 70 CYS n 1 71 ASP n 1 72 THR n 1 73 VAL n 1 74 ILE n 1 75 ALA n 1 76 ARG n 1 77 LYS n 1 78 SER n 1 79 ASP n 1 80 LEU n 1 81 GLY n 1 82 VAL n 1 83 HIS n 1 84 LEU n 1 85 ARG n 1 86 LYS n 1 87 GLN n 1 88 HIS n 1 89 SER n 1 90 TYR n 1 91 ILE n 1 92 GLU n 1 93 GLN n 1 94 GLY n 1 95 LYS n 1 96 LYS n 1 97 CYS n 1 98 ARG n 1 99 TYR n 1 100 CYS n 1 101 ASP n 1 102 ALA n 1 103 VAL n 1 104 PHE n 1 105 HIS n 1 106 GLU n 1 107 ARG n 1 108 TYR n 1 109 ALA n 1 110 LEU n 1 111 ILE n 1 112 GLN n 1 113 HIS n 1 114 GLN n 1 115 LYS n 1 116 SER n 1 117 HIS n 2 1 DC n 2 2 DC n 2 3 DC n 2 4 DT n 2 5 DG n 2 6 DC n 2 7 DT n 2 8 DG n 2 9 DG n 2 10 DC n 2 11 DA n 2 12 DA n 2 13 DC n 3 1 DT n 3 2 DT n 3 3 DG n 3 4 DC n 3 5 DC n 3 6 DA n 3 7 DG n 3 8 DC n 3 9 DA n 3 10 DG n 3 11 DG n 3 12 DG n 3 13 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 117 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CTCF _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21-(DE3)-RIL codon plus' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type pGEX-6p-1 _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pXC1199 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 13 'synthetic construct' ? 32630 ? 3 1 sample 1 13 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP CTCF_HUMAN P49711 ? 1 ;PFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLR KQHSYIEQGKKCRYCDAVFHERYALIQHQKSH ; 378 2 PDB 5K5J 5K5J ? 2 ? 1 3 PDB 5K5J 5K5J ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5K5J A 6 ? 117 ? P49711 378 ? 489 ? 378 489 2 2 5K5J B 1 ? 13 ? 5K5J 1 ? 13 ? 1 13 3 3 5K5J C 1 ? 13 ? 5K5J 1 ? 13 ? 1 13 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5K5J GLY A 1 ? UNP P49711 ? ? 'expression tag' 373 1 1 5K5J PRO A 2 ? UNP P49711 ? ? 'expression tag' 374 2 1 5K5J LEU A 3 ? UNP P49711 ? ? 'expression tag' 375 3 1 5K5J GLY A 4 ? UNP P49711 ? ? 'expression tag' 376 4 1 5K5J SER A 5 ? UNP P49711 ? ? 'expression tag' 377 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5K5J _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.45 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 64.33 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '25% (w/v) polyethylene glycol 3350, 0.2 M ammonium sulfate, and 0.1 M bis-tris HCl, pH 5.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX300-HS' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-06-10 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si (1 1 1)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 54.99 _reflns.entry_id 5K5J _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.287 _reflns.d_resolution_low 27.867 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 14269 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 10.8 _reflns.pdbx_Rmerge_I_obs 0.080 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 28.271 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.906 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.39 _reflns_shell.d_res_low 2.48 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.700 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.965 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 11 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5K5J _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.287 _refine.ls_d_res_low 27.867 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 14269 _refine.ls_number_reflns_R_free 715 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.58 _refine.ls_percent_reflns_R_free 5.01 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2102 _refine.ls_R_factor_R_free 0.2539 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2079 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5K5I _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 29.57 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.28 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 938 _refine_hist.pdbx_number_atoms_nucleic_acid 527 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 29 _refine_hist.number_atoms_total 1507 _refine_hist.d_res_high 2.287 _refine_hist.d_res_low 27.867 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? 1604 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.500 ? 2253 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 19.402 ? 853 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.035 ? 240 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.003 ? 193 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.2871 2.4636 . . 141 2684 100.00 5 . . 0.3671 . 0.2934 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4636 2.7113 . . 141 2673 100.00 5 . . 0.3017 . 0.2796 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7113 3.1032 . . 144 2713 100.00 5 . . 0.3291 . 0.2875 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1032 3.9080 . . 139 2655 97.00 5 . . 0.2731 . 0.2191 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.9080 27.867 . . 150 2829 97.00 5 . . 0.2034 . 0.1592 . . . . . . . . . . # _struct.entry_id 5K5J _struct.title 'Homo sapiens CCCTC-binding factor (CTCF) ZnF5-8 and DNA complex structure in space group P41212' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5K5J _struct_keywords.text 'CCCTC-binding factor, CTCF, zinc finger, TRANSCRIPTION-DNA complex' _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 5 ? I N N 6 ? J N N 7 ? K N N 7 ? L N N 7 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 18 ? GLY A 31 ? ASP A 390 GLY A 403 1 ? 14 HELX_P HELX_P2 AA2 GLN A 46 ? THR A 59 ? GLN A 418 THR A 431 1 ? 14 HELX_P HELX_P3 AA3 ARG A 76 ? HIS A 88 ? ARG A 448 HIS A 460 1 ? 13 HELX_P HELX_P4 AA4 GLU A 106 ? HIS A 117 ? GLU A 478 HIS A 489 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 9 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 381 A ZN 501 1_555 ? ? ? ? ? ? ? 2.316 ? ? metalc2 metalc ? ? A CYS 12 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 384 A ZN 501 1_555 ? ? ? ? ? ? ? 2.291 ? ? metalc3 metalc ? ? A HIS 25 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 397 A ZN 501 1_555 ? ? ? ? ? ? ? 2.053 ? ? metalc4 metalc ? ? A HIS 29 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 401 A ZN 501 1_555 ? ? ? ? ? ? ? 2.006 ? ? metalc5 metalc ? ? A CYS 37 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 409 A ZN 502 1_555 ? ? ? ? ? ? ? 2.302 ? ? metalc6 metalc ? ? A CYS 40 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 412 A ZN 502 1_555 ? ? ? ? ? ? ? 2.267 ? ? metalc7 metalc ? ? A HIS 53 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 425 A ZN 502 1_555 ? ? ? ? ? ? ? 2.047 ? ? metalc8 metalc ? ? A HIS 58 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 430 A ZN 502 1_555 ? ? ? ? ? ? ? 2.018 ? ? metalc9 metalc ? ? A CYS 67 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 439 A ZN 503 1_555 ? ? ? ? ? ? ? 2.288 ? ? metalc10 metalc ? ? A CYS 70 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 442 A ZN 503 1_555 ? ? ? ? ? ? ? 2.238 ? ? metalc11 metalc ? ? A HIS 83 NE2 ? ? ? 1_555 F ZN . ZN ? ? A HIS 455 A ZN 503 1_555 ? ? ? ? ? ? ? 2.039 ? ? metalc12 metalc ? ? A HIS 88 NE2 ? ? ? 1_555 F ZN . ZN ? ? A HIS 460 A ZN 503 1_555 ? ? ? ? ? ? ? 2.010 ? ? metalc13 metalc ? ? A CYS 97 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 469 A ZN 504 1_555 ? ? ? ? ? ? ? 2.337 ? ? metalc14 metalc ? ? A CYS 100 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 472 A ZN 504 1_555 ? ? ? ? ? ? ? 2.247 ? ? metalc15 metalc ? ? A HIS 113 NE2 ? ? ? 1_555 G ZN . ZN ? ? A HIS 485 A ZN 504 1_555 ? ? ? ? ? ? ? 2.051 ? ? metalc16 metalc ? ? A HIS 117 NE2 ? ? ? 1_555 G ZN . ZN ? ? A HIS 489 A ZN 504 1_555 ? ? ? ? ? ? ? 2.037 ? ? hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 C DG 12 N1 ? ? B DC 1 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 C DG 12 O6 ? ? B DC 1 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 C DG 12 N2 ? ? B DC 1 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 2 N3 ? ? ? 1_555 C DG 11 N1 ? ? B DC 2 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 2 N4 ? ? ? 1_555 C DG 11 O6 ? ? B DC 2 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 2 O2 ? ? ? 1_555 C DG 11 N2 ? ? B DC 2 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 3 N3 ? ? ? 1_555 C DG 10 N1 ? ? B DC 3 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 3 N4 ? ? ? 1_555 C DG 10 O6 ? ? B DC 3 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 3 O2 ? ? ? 1_555 C DG 10 N2 ? ? B DC 3 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 9 N1 ? ? B DT 4 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 9 N6 ? ? B DT 4 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DG 5 N1 ? ? ? 1_555 C DC 8 N3 ? ? B DG 5 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 5 N2 ? ? ? 1_555 C DC 8 O2 ? ? B DG 5 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DG 5 O6 ? ? ? 1_555 C DC 8 N4 ? ? B DG 5 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 6 N3 ? ? ? 1_555 C DG 7 N1 ? ? B DC 6 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 6 N4 ? ? ? 1_555 C DG 7 O6 ? ? B DC 6 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 6 O2 ? ? ? 1_555 C DG 7 N2 ? ? B DC 6 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 6 N1 ? ? B DT 7 C DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 6 N6 ? ? B DT 7 C DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 5 N3 ? ? B DG 8 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 5 O2 ? ? B DG 8 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 5 N4 ? ? B DG 8 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DG 9 N1 ? ? ? 1_555 C DC 4 N3 ? ? B DG 9 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DG 9 N2 ? ? ? 1_555 C DC 4 O2 ? ? B DG 9 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DG 9 O6 ? ? ? 1_555 C DC 4 N4 ? ? B DG 9 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DC 10 N3 ? ? ? 1_555 C DG 3 N1 ? ? B DC 10 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DC 10 N4 ? ? ? 1_555 C DG 3 O6 ? ? B DC 10 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DC 10 O2 ? ? ? 1_555 C DG 3 N2 ? ? B DC 10 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DA 11 N1 ? ? ? 1_555 C DT 2 N3 ? ? B DA 11 C DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DA 11 N6 ? ? ? 1_555 C DT 2 O4 ? ? B DA 11 C DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DA 12 N1 ? ? ? 1_555 C DT 1 N3 ? ? B DA 12 C DT 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DA 12 N6 ? ? ? 1_555 C DT 1 O4 ? ? B DA 12 C DT 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 7 ? GLN A 8 ? PHE A 379 GLN A 380 AA1 2 ALA A 15 ? SER A 16 ? ALA A 387 SER A 388 AA2 1 TYR A 35 ? GLU A 36 ? TYR A 407 GLU A 408 AA2 2 ARG A 43 ? PHE A 44 ? ARG A 415 PHE A 416 AA3 1 PHE A 65 ? HIS A 66 ? PHE A 437 HIS A 438 AA3 2 VAL A 73 ? ILE A 74 ? VAL A 445 ILE A 446 AA4 1 LYS A 95 ? LYS A 96 ? LYS A 467 LYS A 468 AA4 2 VAL A 103 ? PHE A 104 ? VAL A 475 PHE A 476 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE A 7 ? N PHE A 379 O SER A 16 ? O SER A 388 AA2 1 2 N TYR A 35 ? N TYR A 407 O PHE A 44 ? O PHE A 416 AA3 1 2 N PHE A 65 ? N PHE A 437 O ILE A 74 ? O ILE A 446 AA4 1 2 N LYS A 95 ? N LYS A 467 O PHE A 104 ? O PHE A 476 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 501 ? 4 'binding site for residue ZN A 501' AC2 Software A ZN 502 ? 4 'binding site for residue ZN A 502' AC3 Software A ZN 503 ? 4 'binding site for residue ZN A 503' AC4 Software A ZN 504 ? 4 'binding site for residue ZN A 504' AC5 Software A SO4 505 ? 6 'binding site for residue SO4 A 505' AC6 Software A ACT 506 ? 3 'binding site for residue ACT A 506' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 9 ? CYS A 381 . ? 1_555 ? 2 AC1 4 CYS A 12 ? CYS A 384 . ? 1_555 ? 3 AC1 4 HIS A 25 ? HIS A 397 . ? 1_555 ? 4 AC1 4 HIS A 29 ? HIS A 401 . ? 1_555 ? 5 AC2 4 CYS A 37 ? CYS A 409 . ? 1_555 ? 6 AC2 4 CYS A 40 ? CYS A 412 . ? 1_555 ? 7 AC2 4 HIS A 53 ? HIS A 425 . ? 1_555 ? 8 AC2 4 HIS A 58 ? HIS A 430 . ? 1_555 ? 9 AC3 4 CYS A 67 ? CYS A 439 . ? 1_555 ? 10 AC3 4 CYS A 70 ? CYS A 442 . ? 1_555 ? 11 AC3 4 HIS A 83 ? HIS A 455 . ? 1_555 ? 12 AC3 4 HIS A 88 ? HIS A 460 . ? 1_555 ? 13 AC4 4 CYS A 97 ? CYS A 469 . ? 1_555 ? 14 AC4 4 CYS A 100 ? CYS A 472 . ? 1_555 ? 15 AC4 4 HIS A 113 ? HIS A 485 . ? 1_555 ? 16 AC4 4 HIS A 117 ? HIS A 489 . ? 1_555 ? 17 AC5 6 TYR A 20 ? TYR A 392 . ? 1_555 ? 18 AC5 6 ARG A 24 ? ARG A 396 . ? 1_555 ? 19 AC5 6 ARG A 27 ? ARG A 399 . ? 1_555 ? 20 AC5 6 TYR A 35 ? TYR A 407 . ? 1_555 ? 21 AC5 6 GLN A 46 ? GLN A 418 . ? 1_555 ? 22 AC5 6 SER A 47 ? SER A 419 . ? 1_555 ? 23 AC6 3 ARG A 107 ? ARG A 479 . ? 1_555 ? 24 AC6 3 GLN A 114 ? GLN A 486 . ? 1_555 ? 25 AC6 3 HOH J . ? HOH A 606 . ? 1_555 ? # _atom_sites.entry_id 5K5J _atom_sites.fract_transf_matrix[1][1] 0.016977 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016977 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005805 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 373 ? ? ? A . n A 1 2 PRO 2 374 ? ? ? A . n A 1 3 LEU 3 375 ? ? ? A . n A 1 4 GLY 4 376 376 GLY GLY A . n A 1 5 SER 5 377 377 SER SER A . n A 1 6 PRO 6 378 378 PRO PRO A . n A 1 7 PHE 7 379 379 PHE PHE A . n A 1 8 GLN 8 380 380 GLN GLN A . n A 1 9 CYS 9 381 381 CYS CYS A . n A 1 10 SER 10 382 382 SER SER A . n A 1 11 LEU 11 383 383 LEU LEU A . n A 1 12 CYS 12 384 384 CYS CYS A . n A 1 13 SER 13 385 385 SER SER A . n A 1 14 TYR 14 386 386 TYR TYR A . n A 1 15 ALA 15 387 387 ALA ALA A . n A 1 16 SER 16 388 388 SER SER A . n A 1 17 ARG 17 389 389 ARG ARG A . n A 1 18 ASP 18 390 390 ASP ASP A . n A 1 19 THR 19 391 391 THR THR A . n A 1 20 TYR 20 392 392 TYR TYR A . n A 1 21 LYS 21 393 393 LYS LYS A . n A 1 22 LEU 22 394 394 LEU LEU A . n A 1 23 LYS 23 395 395 LYS LYS A . n A 1 24 ARG 24 396 396 ARG ARG A . n A 1 25 HIS 25 397 397 HIS HIS A . n A 1 26 MET 26 398 398 MET MET A . n A 1 27 ARG 27 399 399 ARG ARG A . n A 1 28 THR 28 400 400 THR THR A . n A 1 29 HIS 29 401 401 HIS HIS A . n A 1 30 SER 30 402 402 SER SER A . n A 1 31 GLY 31 403 403 GLY GLY A . n A 1 32 GLU 32 404 404 GLU GLU A . n A 1 33 LYS 33 405 405 LYS LYS A . n A 1 34 PRO 34 406 406 PRO PRO A . n A 1 35 TYR 35 407 407 TYR TYR A . n A 1 36 GLU 36 408 408 GLU GLU A . n A 1 37 CYS 37 409 409 CYS CYS A . n A 1 38 TYR 38 410 410 TYR TYR A . n A 1 39 ILE 39 411 411 ILE ILE A . n A 1 40 CYS 40 412 412 CYS CYS A . n A 1 41 HIS 41 413 413 HIS HIS A . n A 1 42 ALA 42 414 414 ALA ALA A . n A 1 43 ARG 43 415 415 ARG ARG A . n A 1 44 PHE 44 416 416 PHE PHE A . n A 1 45 THR 45 417 417 THR THR A . n A 1 46 GLN 46 418 418 GLN GLN A . n A 1 47 SER 47 419 419 SER SER A . n A 1 48 GLY 48 420 420 GLY GLY A . n A 1 49 THR 49 421 421 THR THR A . n A 1 50 MET 50 422 422 MET MET A . n A 1 51 LYS 51 423 423 LYS LYS A . n A 1 52 MET 52 424 424 MET MET A . n A 1 53 HIS 53 425 425 HIS HIS A . n A 1 54 ILE 54 426 426 ILE ILE A . n A 1 55 LEU 55 427 427 LEU LEU A . n A 1 56 GLN 56 428 428 GLN GLN A . n A 1 57 LYS 57 429 429 LYS LYS A . n A 1 58 HIS 58 430 430 HIS HIS A . n A 1 59 THR 59 431 431 THR THR A . n A 1 60 GLU 60 432 432 GLU GLU A . n A 1 61 ASN 61 433 433 ASN ASN A . n A 1 62 VAL 62 434 434 VAL VAL A . n A 1 63 ALA 63 435 435 ALA ALA A . n A 1 64 LYS 64 436 436 LYS LYS A . n A 1 65 PHE 65 437 437 PHE PHE A . n A 1 66 HIS 66 438 438 HIS HIS A . n A 1 67 CYS 67 439 439 CYS CYS A . n A 1 68 PRO 68 440 440 PRO PRO A . n A 1 69 HIS 69 441 441 HIS HIS A . n A 1 70 CYS 70 442 442 CYS CYS A . n A 1 71 ASP 71 443 443 ASP ASP A . n A 1 72 THR 72 444 444 THR THR A . n A 1 73 VAL 73 445 445 VAL VAL A . n A 1 74 ILE 74 446 446 ILE ILE A . n A 1 75 ALA 75 447 447 ALA ALA A . n A 1 76 ARG 76 448 448 ARG ARG A . n A 1 77 LYS 77 449 449 LYS LYS A . n A 1 78 SER 78 450 450 SER SER A . n A 1 79 ASP 79 451 451 ASP ASP A . n A 1 80 LEU 80 452 452 LEU LEU A . n A 1 81 GLY 81 453 453 GLY GLY A . n A 1 82 VAL 82 454 454 VAL VAL A . n A 1 83 HIS 83 455 455 HIS HIS A . n A 1 84 LEU 84 456 456 LEU LEU A . n A 1 85 ARG 85 457 457 ARG ARG A . n A 1 86 LYS 86 458 458 LYS LYS A . n A 1 87 GLN 87 459 459 GLN GLN A . n A 1 88 HIS 88 460 460 HIS HIS A . n A 1 89 SER 89 461 461 SER SER A . n A 1 90 TYR 90 462 462 TYR TYR A . n A 1 91 ILE 91 463 463 ILE ILE A . n A 1 92 GLU 92 464 464 GLU GLU A . n A 1 93 GLN 93 465 465 GLN GLN A . n A 1 94 GLY 94 466 466 GLY GLY A . n A 1 95 LYS 95 467 467 LYS LYS A . n A 1 96 LYS 96 468 468 LYS LYS A . n A 1 97 CYS 97 469 469 CYS CYS A . n A 1 98 ARG 98 470 470 ARG ARG A . n A 1 99 TYR 99 471 471 TYR TYR A . n A 1 100 CYS 100 472 472 CYS CYS A . n A 1 101 ASP 101 473 473 ASP ASP A . n A 1 102 ALA 102 474 474 ALA ALA A . n A 1 103 VAL 103 475 475 VAL VAL A . n A 1 104 PHE 104 476 476 PHE PHE A . n A 1 105 HIS 105 477 477 HIS HIS A . n A 1 106 GLU 106 478 478 GLU GLU A . n A 1 107 ARG 107 479 479 ARG ARG A . n A 1 108 TYR 108 480 480 TYR TYR A . n A 1 109 ALA 109 481 481 ALA ALA A . n A 1 110 LEU 110 482 482 LEU LEU A . n A 1 111 ILE 111 483 483 ILE ILE A . n A 1 112 GLN 112 484 484 GLN GLN A . n A 1 113 HIS 113 485 485 HIS HIS A . n A 1 114 GLN 114 486 486 GLN GLN A . n A 1 115 LYS 115 487 487 LYS LYS A . n A 1 116 SER 116 488 488 SER SER A . n A 1 117 HIS 117 489 489 HIS HIS A . n B 2 1 DC 1 1 1 DC DC B . n B 2 2 DC 2 2 2 DC DC B . n B 2 3 DC 3 3 3 DC DC B . n B 2 4 DT 4 4 4 DT DT B . n B 2 5 DG 5 5 5 DG DG B . n B 2 6 DC 6 6 6 DC DC B . n B 2 7 DT 7 7 7 DT DT B . n B 2 8 DG 8 8 8 DG DG B . n B 2 9 DG 9 9 9 DG DG B . n B 2 10 DC 10 10 10 DC DC B . n B 2 11 DA 11 11 11 DA DA B . n B 2 12 DA 12 12 12 DA DA B . n B 2 13 DC 13 13 13 DC DC B . n C 3 1 DT 1 1 1 DT DT C . n C 3 2 DT 2 2 2 DT DT C . n C 3 3 DG 3 3 3 DG DG C . n C 3 4 DC 4 4 4 DC DC C . n C 3 5 DC 5 5 5 DC DC C . n C 3 6 DA 6 6 6 DA DA C . n C 3 7 DG 7 7 7 DG DG C . n C 3 8 DC 8 8 8 DC DC C . n C 3 9 DA 9 9 9 DA DA C . n C 3 10 DG 10 10 10 DG DG C . n C 3 11 DG 11 11 11 DG DG C . n C 3 12 DG 12 12 12 DG DG C . n C 3 13 DG 13 13 13 DG DG C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN 1 501 1 ZN ZN A . E 4 ZN 1 502 2 ZN ZN A . F 4 ZN 1 503 3 ZN ZN A . G 4 ZN 1 504 4 ZN ZN A . H 5 SO4 1 505 5 SO4 SO4 A . I 6 ACT 1 506 6 ACT ACT A . J 7 HOH 1 601 31 HOH HOH A . J 7 HOH 2 602 26 HOH HOH A . J 7 HOH 3 603 27 HOH HOH A . J 7 HOH 4 604 32 HOH HOH A . J 7 HOH 5 605 19 HOH HOH A . J 7 HOH 6 606 33 HOH HOH A . J 7 HOH 7 607 3 HOH HOH A . J 7 HOH 8 608 18 HOH HOH A . J 7 HOH 9 609 6 HOH HOH A . J 7 HOH 10 610 12 HOH HOH A . J 7 HOH 11 611 35 HOH HOH A . J 7 HOH 12 612 21 HOH HOH A . J 7 HOH 13 613 29 HOH HOH A . J 7 HOH 14 614 13 HOH HOH A . K 7 HOH 1 101 5 HOH HOH B . K 7 HOH 2 102 4 HOH HOH B . K 7 HOH 3 103 1 HOH HOH B . K 7 HOH 4 104 10 HOH HOH B . K 7 HOH 5 105 34 HOH HOH B . K 7 HOH 6 106 8 HOH HOH B . K 7 HOH 7 107 17 HOH HOH B . K 7 HOH 8 108 11 HOH HOH B . L 7 HOH 1 101 23 HOH HOH C . L 7 HOH 2 102 2 HOH HOH C . L 7 HOH 3 103 16 HOH HOH C . L 7 HOH 4 104 9 HOH HOH C . L 7 HOH 5 105 24 HOH HOH C . L 7 HOH 6 106 25 HOH HOH C . L 7 HOH 7 107 14 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4160 ? 1 MORE -48 ? 1 'SSA (A^2)' 11090 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 9 ? A CYS 381 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 SG ? A CYS 12 ? A CYS 384 ? 1_555 120.6 ? 2 SG ? A CYS 9 ? A CYS 381 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 25 ? A HIS 397 ? 1_555 104.2 ? 3 SG ? A CYS 12 ? A CYS 384 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 25 ? A HIS 397 ? 1_555 98.2 ? 4 SG ? A CYS 9 ? A CYS 381 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 29 ? A HIS 401 ? 1_555 112.2 ? 5 SG ? A CYS 12 ? A CYS 384 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 29 ? A HIS 401 ? 1_555 119.7 ? 6 NE2 ? A HIS 25 ? A HIS 397 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 29 ? A HIS 401 ? 1_555 95.1 ? 7 SG ? A CYS 37 ? A CYS 409 ? 1_555 ZN ? E ZN . ? A ZN 502 ? 1_555 SG ? A CYS 40 ? A CYS 412 ? 1_555 115.5 ? 8 SG ? A CYS 37 ? A CYS 409 ? 1_555 ZN ? E ZN . ? A ZN 502 ? 1_555 NE2 ? A HIS 53 ? A HIS 425 ? 1_555 117.8 ? 9 SG ? A CYS 40 ? A CYS 412 ? 1_555 ZN ? E ZN . ? A ZN 502 ? 1_555 NE2 ? A HIS 53 ? A HIS 425 ? 1_555 98.5 ? 10 SG ? A CYS 37 ? A CYS 409 ? 1_555 ZN ? E ZN . ? A ZN 502 ? 1_555 NE2 ? A HIS 58 ? A HIS 430 ? 1_555 112.5 ? 11 SG ? A CYS 40 ? A CYS 412 ? 1_555 ZN ? E ZN . ? A ZN 502 ? 1_555 NE2 ? A HIS 58 ? A HIS 430 ? 1_555 110.0 ? 12 NE2 ? A HIS 53 ? A HIS 425 ? 1_555 ZN ? E ZN . ? A ZN 502 ? 1_555 NE2 ? A HIS 58 ? A HIS 430 ? 1_555 100.8 ? 13 SG ? A CYS 67 ? A CYS 439 ? 1_555 ZN ? F ZN . ? A ZN 503 ? 1_555 SG ? A CYS 70 ? A CYS 442 ? 1_555 117.0 ? 14 SG ? A CYS 67 ? A CYS 439 ? 1_555 ZN ? F ZN . ? A ZN 503 ? 1_555 NE2 ? A HIS 83 ? A HIS 455 ? 1_555 107.9 ? 15 SG ? A CYS 70 ? A CYS 442 ? 1_555 ZN ? F ZN . ? A ZN 503 ? 1_555 NE2 ? A HIS 83 ? A HIS 455 ? 1_555 103.8 ? 16 SG ? A CYS 67 ? A CYS 439 ? 1_555 ZN ? F ZN . ? A ZN 503 ? 1_555 NE2 ? A HIS 88 ? A HIS 460 ? 1_555 101.7 ? 17 SG ? A CYS 70 ? A CYS 442 ? 1_555 ZN ? F ZN . ? A ZN 503 ? 1_555 NE2 ? A HIS 88 ? A HIS 460 ? 1_555 125.7 ? 18 NE2 ? A HIS 83 ? A HIS 455 ? 1_555 ZN ? F ZN . ? A ZN 503 ? 1_555 NE2 ? A HIS 88 ? A HIS 460 ? 1_555 98.3 ? 19 SG ? A CYS 97 ? A CYS 469 ? 1_555 ZN ? G ZN . ? A ZN 504 ? 1_555 SG ? A CYS 100 ? A CYS 472 ? 1_555 118.5 ? 20 SG ? A CYS 97 ? A CYS 469 ? 1_555 ZN ? G ZN . ? A ZN 504 ? 1_555 NE2 ? A HIS 113 ? A HIS 485 ? 1_555 107.0 ? 21 SG ? A CYS 100 ? A CYS 472 ? 1_555 ZN ? G ZN . ? A ZN 504 ? 1_555 NE2 ? A HIS 113 ? A HIS 485 ? 1_555 101.1 ? 22 SG ? A CYS 97 ? A CYS 469 ? 1_555 ZN ? G ZN . ? A ZN 504 ? 1_555 NE2 ? A HIS 117 ? A HIS 489 ? 1_555 104.6 ? 23 SG ? A CYS 100 ? A CYS 472 ? 1_555 ZN ? G ZN . ? A ZN 504 ? 1_555 NE2 ? A HIS 117 ? A HIS 489 ? 1_555 118.5 ? 24 NE2 ? A HIS 113 ? A HIS 485 ? 1_555 ZN ? G ZN . ? A ZN 504 ? 1_555 NE2 ? A HIS 117 ? A HIS 489 ? 1_555 105.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-05-24 2 'Structure model' 1 1 2017-06-07 3 'Structure model' 1 2 2017-06-14 4 'Structure model' 1 3 2017-09-20 5 'Structure model' 1 4 2019-12-25 6 'Structure model' 1 5 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 5 'Structure model' 'Author supporting evidence' 5 6 'Structure model' 'Data collection' 6 6 'Structure model' 'Database references' 7 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 4 'Structure model' pdbx_audit_support 3 5 'Structure model' pdbx_audit_support 4 6 'Structure model' chem_comp_atom 5 6 'Structure model' chem_comp_bond 6 6 'Structure model' database_2 7 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.country' 2 3 'Structure model' '_citation.journal_id_ASTM' 3 3 'Structure model' '_citation.journal_id_CSD' 4 3 'Structure model' '_citation.journal_volume' 5 3 'Structure model' '_citation.page_first' 6 3 'Structure model' '_citation.page_last' 7 4 'Structure model' '_pdbx_audit_support.funding_organization' 8 5 'Structure model' '_pdbx_audit_support.funding_organization' 9 6 'Structure model' '_database_2.pdbx_DOI' 10 6 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -13.3194 21.4347 0.9945 0.7518 0.9735 0.6397 -0.0025 -0.1662 -0.0778 2.2254 3.3421 3.0571 2.1262 1.9529 2.8667 0.0878 -0.6284 1.0885 -1.5331 -0.3328 -1.2384 2.2222 -0.3692 0.5347 'X-RAY DIFFRACTION' 2 ? refined -4.2888 33.9109 -10.9454 0.5867 0.3787 0.4981 -0.0575 0.0225 -0.1444 7.3289 1.8805 3.6535 2.6013 -2.0846 0.0800 0.2752 0.0227 -0.2655 -0.4431 0.6791 -0.0449 0.0772 -0.7835 0.3193 'X-RAY DIFFRACTION' 3 ? refined 13.0239 39.1051 -23.4448 0.9765 0.7554 0.9241 -0.3161 0.1597 -0.0067 6.2880 5.8099 6.9665 -5.6598 4.0000 -1.8271 0.2854 0.0270 -0.0638 1.3693 3.1014 -1.5074 -0.7157 -0.7356 1.8553 'X-RAY DIFFRACTION' 4 ? refined 7.5452 15.9622 -30.4513 0.3831 0.4706 0.4669 -0.0242 0.0010 -0.0662 0.5892 6.4599 5.3407 0.7267 1.2091 4.7485 0.0547 0.1810 -0.2733 0.0732 0.2178 -0.2110 -0.0166 -0.2951 0.2039 'X-RAY DIFFRACTION' 5 ? refined 5.3410 7.7305 -41.3454 0.3987 0.4207 0.4176 0.0329 0.0096 -0.0598 5.5629 6.3165 7.3759 2.1142 2.4377 3.0396 -0.0516 0.0472 0.0069 -0.1070 0.4240 -0.1774 -0.6860 -0.7977 0.1739 'X-RAY DIFFRACTION' 6 ? refined 7.4315 11.1625 -47.7739 0.6538 0.5439 0.6180 -0.1465 0.0313 0.1314 2.2219 4.8126 2.0995 -0.2627 -0.0702 0.3660 -0.2892 -0.2644 0.6343 0.8797 0.7681 -1.6213 -0.9052 -1.1132 0.3389 'X-RAY DIFFRACTION' 7 ? refined 5.7636 26.9261 -9.1865 0.6104 0.7426 0.4962 0.0681 -0.0139 -0.1359 2.3579 4.1778 2.1419 2.5187 -0.9511 -0.3681 0.6734 0.4260 -1.3555 0.6744 0.0437 -0.2035 0.0298 -0.3292 0.2561 'X-RAY DIFFRACTION' 8 ? refined -4.2213 22.9303 -23.2797 0.5450 0.5720 0.4508 -0.0880 -0.0049 -0.1140 4.9111 8.3716 6.9884 -4.8045 2.9703 -5.8102 0.3776 -0.1972 -0.3091 0.1960 -0.0016 0.0873 -0.8625 0.0676 0.3210 'X-RAY DIFFRACTION' 9 ? refined -0.7295 31.6392 -36.6285 1.0043 0.7273 0.5901 -0.1601 0.0953 0.0078 3.3152 2.7805 2.4904 2.5928 -2.6157 -1.4767 -0.2090 1.1602 -1.0065 1.4307 0.7926 -0.2784 -1.8000 -0.5766 -0.9979 'X-RAY DIFFRACTION' 10 ? refined 1.6822 24.4071 -33.1117 0.7363 0.6161 0.5353 -0.0750 0.0564 -0.0479 2.2797 3.3547 5.7416 -2.4187 2.1425 -3.6656 0.5086 0.0998 -0.5254 0.4075 -0.7622 0.2856 0.0797 0.3484 -0.0420 'X-RAY DIFFRACTION' 11 ? refined -2.8081 29.5876 -18.0488 0.6301 0.5562 0.4668 -0.0212 0.0224 -0.0829 5.4113 5.5148 6.5775 0.7001 -2.4793 -1.9359 0.0643 0.2593 -0.3041 0.0678 0.6845 0.2167 0.1572 -0.7389 0.3309 'X-RAY DIFFRACTION' 12 ? refined 3.0264 21.6384 -3.5851 0.6870 1.0103 0.5231 0.0386 -0.0333 -0.2307 2.4861 9.8430 2.6743 0.6756 2.5586 0.1263 0.2629 1.0879 -1.4189 -0.9947 -0.4923 -0.5235 0.9603 -0.0241 1.2464 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 376 A 380 '( CHAIN A AND RESID 376:380 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 381 A 428 '( CHAIN A AND RESID 381:428 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 429 A 433 '( CHAIN A AND RESID 429:433 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 434 A 470 '( CHAIN A AND RESID 434:470 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 471 A 484 '( CHAIN A AND RESID 471:484 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 485 A 489 '( CHAIN A AND RESID 485:489 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 7 7 B 1 B 5 '( CHAIN B AND RESID 1:5 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 8 8 B 6 B 9 '( CHAIN B AND RESID 6:9 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 9 9 B 10 B 13 '( CHAIN B AND RESID 10:13 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 10 10 C 1 C 4 '( CHAIN C AND RESID 1:4 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 11 11 C 5 C 9 '( CHAIN C AND RESID 5:9 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 12 12 C 10 C 13 '( CHAIN C AND RESID 10:13 )' ? ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(dev_2400: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 384 ? ? -125.99 -168.83 2 1 ILE A 411 ? ? -102.15 -62.81 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 373 ? A GLY 1 2 1 Y 1 A PRO 374 ? A PRO 2 3 1 Y 1 A LEU 375 ? A LEU 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACT C C N N 1 ACT O O N N 2 ACT OXT O N N 3 ACT CH3 C N N 4 ACT H1 H N N 5 ACT H2 H N N 6 ACT H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 CYS N N N N 81 CYS CA C N R 82 CYS C C N N 83 CYS O O N N 84 CYS CB C N N 85 CYS SG S N N 86 CYS OXT O N N 87 CYS H H N N 88 CYS H2 H N N 89 CYS HA H N N 90 CYS HB2 H N N 91 CYS HB3 H N N 92 CYS HG H N N 93 CYS HXT H N N 94 DA OP3 O N N 95 DA P P N N 96 DA OP1 O N N 97 DA OP2 O N N 98 DA "O5'" O N N 99 DA "C5'" C N N 100 DA "C4'" C N R 101 DA "O4'" O N N 102 DA "C3'" C N S 103 DA "O3'" O N N 104 DA "C2'" C N N 105 DA "C1'" C N R 106 DA N9 N Y N 107 DA C8 C Y N 108 DA N7 N Y N 109 DA C5 C Y N 110 DA C6 C Y N 111 DA N6 N N N 112 DA N1 N Y N 113 DA C2 C Y N 114 DA N3 N Y N 115 DA C4 C Y N 116 DA HOP3 H N N 117 DA HOP2 H N N 118 DA "H5'" H N N 119 DA "H5''" H N N 120 DA "H4'" H N N 121 DA "H3'" H N N 122 DA "HO3'" H N N 123 DA "H2'" H N N 124 DA "H2''" H N N 125 DA "H1'" H N N 126 DA H8 H N N 127 DA H61 H N N 128 DA H62 H N N 129 DA H2 H N N 130 DC OP3 O N N 131 DC P P N N 132 DC OP1 O N N 133 DC OP2 O N N 134 DC "O5'" O N N 135 DC "C5'" C N N 136 DC "C4'" C N R 137 DC "O4'" O N N 138 DC "C3'" C N S 139 DC "O3'" O N N 140 DC "C2'" C N N 141 DC "C1'" C N R 142 DC N1 N N N 143 DC C2 C N N 144 DC O2 O N N 145 DC N3 N N N 146 DC C4 C N N 147 DC N4 N N N 148 DC C5 C N N 149 DC C6 C N N 150 DC HOP3 H N N 151 DC HOP2 H N N 152 DC "H5'" H N N 153 DC "H5''" H N N 154 DC "H4'" H N N 155 DC "H3'" H N N 156 DC "HO3'" H N N 157 DC "H2'" H N N 158 DC "H2''" H N N 159 DC "H1'" H N N 160 DC H41 H N N 161 DC H42 H N N 162 DC H5 H N N 163 DC H6 H N N 164 DG OP3 O N N 165 DG P P N N 166 DG OP1 O N N 167 DG OP2 O N N 168 DG "O5'" O N N 169 DG "C5'" C N N 170 DG "C4'" C N R 171 DG "O4'" O N N 172 DG "C3'" C N S 173 DG "O3'" O N N 174 DG "C2'" C N N 175 DG "C1'" C N R 176 DG N9 N Y N 177 DG C8 C Y N 178 DG N7 N Y N 179 DG C5 C Y N 180 DG C6 C N N 181 DG O6 O N N 182 DG N1 N N N 183 DG C2 C N N 184 DG N2 N N N 185 DG N3 N N N 186 DG C4 C Y N 187 DG HOP3 H N N 188 DG HOP2 H N N 189 DG "H5'" H N N 190 DG "H5''" H N N 191 DG "H4'" H N N 192 DG "H3'" H N N 193 DG "HO3'" H N N 194 DG "H2'" H N N 195 DG "H2''" H N N 196 DG "H1'" H N N 197 DG H8 H N N 198 DG H1 H N N 199 DG H21 H N N 200 DG H22 H N N 201 DT OP3 O N N 202 DT P P N N 203 DT OP1 O N N 204 DT OP2 O N N 205 DT "O5'" O N N 206 DT "C5'" C N N 207 DT "C4'" C N R 208 DT "O4'" O N N 209 DT "C3'" C N S 210 DT "O3'" O N N 211 DT "C2'" C N N 212 DT "C1'" C N R 213 DT N1 N N N 214 DT C2 C N N 215 DT O2 O N N 216 DT N3 N N N 217 DT C4 C N N 218 DT O4 O N N 219 DT C5 C N N 220 DT C7 C N N 221 DT C6 C N N 222 DT HOP3 H N N 223 DT HOP2 H N N 224 DT "H5'" H N N 225 DT "H5''" H N N 226 DT "H4'" H N N 227 DT "H3'" H N N 228 DT "HO3'" H N N 229 DT "H2'" H N N 230 DT "H2''" H N N 231 DT "H1'" H N N 232 DT H3 H N N 233 DT H71 H N N 234 DT H72 H N N 235 DT H73 H N N 236 DT H6 H N N 237 GLN N N N N 238 GLN CA C N S 239 GLN C C N N 240 GLN O O N N 241 GLN CB C N N 242 GLN CG C N N 243 GLN CD C N N 244 GLN OE1 O N N 245 GLN NE2 N N N 246 GLN OXT O N N 247 GLN H H N N 248 GLN H2 H N N 249 GLN HA H N N 250 GLN HB2 H N N 251 GLN HB3 H N N 252 GLN HG2 H N N 253 GLN HG3 H N N 254 GLN HE21 H N N 255 GLN HE22 H N N 256 GLN HXT H N N 257 GLU N N N N 258 GLU CA C N S 259 GLU C C N N 260 GLU O O N N 261 GLU CB C N N 262 GLU CG C N N 263 GLU CD C N N 264 GLU OE1 O N N 265 GLU OE2 O N N 266 GLU OXT O N N 267 GLU H H N N 268 GLU H2 H N N 269 GLU HA H N N 270 GLU HB2 H N N 271 GLU HB3 H N N 272 GLU HG2 H N N 273 GLU HG3 H N N 274 GLU HE2 H N N 275 GLU HXT H N N 276 GLY N N N N 277 GLY CA C N N 278 GLY C C N N 279 GLY O O N N 280 GLY OXT O N N 281 GLY H H N N 282 GLY H2 H N N 283 GLY HA2 H N N 284 GLY HA3 H N N 285 GLY HXT H N N 286 HIS N N N N 287 HIS CA C N S 288 HIS C C N N 289 HIS O O N N 290 HIS CB C N N 291 HIS CG C Y N 292 HIS ND1 N Y N 293 HIS CD2 C Y N 294 HIS CE1 C Y N 295 HIS NE2 N Y N 296 HIS OXT O N N 297 HIS H H N N 298 HIS H2 H N N 299 HIS HA H N N 300 HIS HB2 H N N 301 HIS HB3 H N N 302 HIS HD1 H N N 303 HIS HD2 H N N 304 HIS HE1 H N N 305 HIS HE2 H N N 306 HIS HXT H N N 307 HOH O O N N 308 HOH H1 H N N 309 HOH H2 H N N 310 ILE N N N N 311 ILE CA C N S 312 ILE C C N N 313 ILE O O N N 314 ILE CB C N S 315 ILE CG1 C N N 316 ILE CG2 C N N 317 ILE CD1 C N N 318 ILE OXT O N N 319 ILE H H N N 320 ILE H2 H N N 321 ILE HA H N N 322 ILE HB H N N 323 ILE HG12 H N N 324 ILE HG13 H N N 325 ILE HG21 H N N 326 ILE HG22 H N N 327 ILE HG23 H N N 328 ILE HD11 H N N 329 ILE HD12 H N N 330 ILE HD13 H N N 331 ILE HXT H N N 332 LEU N N N N 333 LEU CA C N S 334 LEU C C N N 335 LEU O O N N 336 LEU CB C N N 337 LEU CG C N N 338 LEU CD1 C N N 339 LEU CD2 C N N 340 LEU OXT O N N 341 LEU H H N N 342 LEU H2 H N N 343 LEU HA H N N 344 LEU HB2 H N N 345 LEU HB3 H N N 346 LEU HG H N N 347 LEU HD11 H N N 348 LEU HD12 H N N 349 LEU HD13 H N N 350 LEU HD21 H N N 351 LEU HD22 H N N 352 LEU HD23 H N N 353 LEU HXT H N N 354 LYS N N N N 355 LYS CA C N S 356 LYS C C N N 357 LYS O O N N 358 LYS CB C N N 359 LYS CG C N N 360 LYS CD C N N 361 LYS CE C N N 362 LYS NZ N N N 363 LYS OXT O N N 364 LYS H H N N 365 LYS H2 H N N 366 LYS HA H N N 367 LYS HB2 H N N 368 LYS HB3 H N N 369 LYS HG2 H N N 370 LYS HG3 H N N 371 LYS HD2 H N N 372 LYS HD3 H N N 373 LYS HE2 H N N 374 LYS HE3 H N N 375 LYS HZ1 H N N 376 LYS HZ2 H N N 377 LYS HZ3 H N N 378 LYS HXT H N N 379 MET N N N N 380 MET CA C N S 381 MET C C N N 382 MET O O N N 383 MET CB C N N 384 MET CG C N N 385 MET SD S N N 386 MET CE C N N 387 MET OXT O N N 388 MET H H N N 389 MET H2 H N N 390 MET HA H N N 391 MET HB2 H N N 392 MET HB3 H N N 393 MET HG2 H N N 394 MET HG3 H N N 395 MET HE1 H N N 396 MET HE2 H N N 397 MET HE3 H N N 398 MET HXT H N N 399 PHE N N N N 400 PHE CA C N S 401 PHE C C N N 402 PHE O O N N 403 PHE CB C N N 404 PHE CG C Y N 405 PHE CD1 C Y N 406 PHE CD2 C Y N 407 PHE CE1 C Y N 408 PHE CE2 C Y N 409 PHE CZ C Y N 410 PHE OXT O N N 411 PHE H H N N 412 PHE H2 H N N 413 PHE HA H N N 414 PHE HB2 H N N 415 PHE HB3 H N N 416 PHE HD1 H N N 417 PHE HD2 H N N 418 PHE HE1 H N N 419 PHE HE2 H N N 420 PHE HZ H N N 421 PHE HXT H N N 422 PRO N N N N 423 PRO CA C N S 424 PRO C C N N 425 PRO O O N N 426 PRO CB C N N 427 PRO CG C N N 428 PRO CD C N N 429 PRO OXT O N N 430 PRO H H N N 431 PRO HA H N N 432 PRO HB2 H N N 433 PRO HB3 H N N 434 PRO HG2 H N N 435 PRO HG3 H N N 436 PRO HD2 H N N 437 PRO HD3 H N N 438 PRO HXT H N N 439 SER N N N N 440 SER CA C N S 441 SER C C N N 442 SER O O N N 443 SER CB C N N 444 SER OG O N N 445 SER OXT O N N 446 SER H H N N 447 SER H2 H N N 448 SER HA H N N 449 SER HB2 H N N 450 SER HB3 H N N 451 SER HG H N N 452 SER HXT H N N 453 SO4 S S N N 454 SO4 O1 O N N 455 SO4 O2 O N N 456 SO4 O3 O N N 457 SO4 O4 O N N 458 THR N N N N 459 THR CA C N S 460 THR C C N N 461 THR O O N N 462 THR CB C N R 463 THR OG1 O N N 464 THR CG2 C N N 465 THR OXT O N N 466 THR H H N N 467 THR H2 H N N 468 THR HA H N N 469 THR HB H N N 470 THR HG1 H N N 471 THR HG21 H N N 472 THR HG22 H N N 473 THR HG23 H N N 474 THR HXT H N N 475 TYR N N N N 476 TYR CA C N S 477 TYR C C N N 478 TYR O O N N 479 TYR CB C N N 480 TYR CG C Y N 481 TYR CD1 C Y N 482 TYR CD2 C Y N 483 TYR CE1 C Y N 484 TYR CE2 C Y N 485 TYR CZ C Y N 486 TYR OH O N N 487 TYR OXT O N N 488 TYR H H N N 489 TYR H2 H N N 490 TYR HA H N N 491 TYR HB2 H N N 492 TYR HB3 H N N 493 TYR HD1 H N N 494 TYR HD2 H N N 495 TYR HE1 H N N 496 TYR HE2 H N N 497 TYR HH H N N 498 TYR HXT H N N 499 VAL N N N N 500 VAL CA C N S 501 VAL C C N N 502 VAL O O N N 503 VAL CB C N N 504 VAL CG1 C N N 505 VAL CG2 C N N 506 VAL OXT O N N 507 VAL H H N N 508 VAL H2 H N N 509 VAL HA H N N 510 VAL HB H N N 511 VAL HG11 H N N 512 VAL HG12 H N N 513 VAL HG13 H N N 514 VAL HG21 H N N 515 VAL HG22 H N N 516 VAL HG23 H N N 517 VAL HXT H N N 518 ZN ZN ZN N N 519 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACT C O doub N N 1 ACT C OXT sing N N 2 ACT C CH3 sing N N 3 ACT CH3 H1 sing N N 4 ACT CH3 H2 sing N N 5 ACT CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 CYS N CA sing N N 76 CYS N H sing N N 77 CYS N H2 sing N N 78 CYS CA C sing N N 79 CYS CA CB sing N N 80 CYS CA HA sing N N 81 CYS C O doub N N 82 CYS C OXT sing N N 83 CYS CB SG sing N N 84 CYS CB HB2 sing N N 85 CYS CB HB3 sing N N 86 CYS SG HG sing N N 87 CYS OXT HXT sing N N 88 DA OP3 P sing N N 89 DA OP3 HOP3 sing N N 90 DA P OP1 doub N N 91 DA P OP2 sing N N 92 DA P "O5'" sing N N 93 DA OP2 HOP2 sing N N 94 DA "O5'" "C5'" sing N N 95 DA "C5'" "C4'" sing N N 96 DA "C5'" "H5'" sing N N 97 DA "C5'" "H5''" sing N N 98 DA "C4'" "O4'" sing N N 99 DA "C4'" "C3'" sing N N 100 DA "C4'" "H4'" sing N N 101 DA "O4'" "C1'" sing N N 102 DA "C3'" "O3'" sing N N 103 DA "C3'" "C2'" sing N N 104 DA "C3'" "H3'" sing N N 105 DA "O3'" "HO3'" sing N N 106 DA "C2'" "C1'" sing N N 107 DA "C2'" "H2'" sing N N 108 DA "C2'" "H2''" sing N N 109 DA "C1'" N9 sing N N 110 DA "C1'" "H1'" sing N N 111 DA N9 C8 sing Y N 112 DA N9 C4 sing Y N 113 DA C8 N7 doub Y N 114 DA C8 H8 sing N N 115 DA N7 C5 sing Y N 116 DA C5 C6 sing Y N 117 DA C5 C4 doub Y N 118 DA C6 N6 sing N N 119 DA C6 N1 doub Y N 120 DA N6 H61 sing N N 121 DA N6 H62 sing N N 122 DA N1 C2 sing Y N 123 DA C2 N3 doub Y N 124 DA C2 H2 sing N N 125 DA N3 C4 sing Y N 126 DC OP3 P sing N N 127 DC OP3 HOP3 sing N N 128 DC P OP1 doub N N 129 DC P OP2 sing N N 130 DC P "O5'" sing N N 131 DC OP2 HOP2 sing N N 132 DC "O5'" "C5'" sing N N 133 DC "C5'" "C4'" sing N N 134 DC "C5'" "H5'" sing N N 135 DC "C5'" "H5''" sing N N 136 DC "C4'" "O4'" sing N N 137 DC "C4'" "C3'" sing N N 138 DC "C4'" "H4'" sing N N 139 DC "O4'" "C1'" sing N N 140 DC "C3'" "O3'" sing N N 141 DC "C3'" "C2'" sing N N 142 DC "C3'" "H3'" sing N N 143 DC "O3'" "HO3'" sing N N 144 DC "C2'" "C1'" sing N N 145 DC "C2'" "H2'" sing N N 146 DC "C2'" "H2''" sing N N 147 DC "C1'" N1 sing N N 148 DC "C1'" "H1'" sing N N 149 DC N1 C2 sing N N 150 DC N1 C6 sing N N 151 DC C2 O2 doub N N 152 DC C2 N3 sing N N 153 DC N3 C4 doub N N 154 DC C4 N4 sing N N 155 DC C4 C5 sing N N 156 DC N4 H41 sing N N 157 DC N4 H42 sing N N 158 DC C5 C6 doub N N 159 DC C5 H5 sing N N 160 DC C6 H6 sing N N 161 DG OP3 P sing N N 162 DG OP3 HOP3 sing N N 163 DG P OP1 doub N N 164 DG P OP2 sing N N 165 DG P "O5'" sing N N 166 DG OP2 HOP2 sing N N 167 DG "O5'" "C5'" sing N N 168 DG "C5'" "C4'" sing N N 169 DG "C5'" "H5'" sing N N 170 DG "C5'" "H5''" sing N N 171 DG "C4'" "O4'" sing N N 172 DG "C4'" "C3'" sing N N 173 DG "C4'" "H4'" sing N N 174 DG "O4'" "C1'" sing N N 175 DG "C3'" "O3'" sing N N 176 DG "C3'" "C2'" sing N N 177 DG "C3'" "H3'" sing N N 178 DG "O3'" "HO3'" sing N N 179 DG "C2'" "C1'" sing N N 180 DG "C2'" "H2'" sing N N 181 DG "C2'" "H2''" sing N N 182 DG "C1'" N9 sing N N 183 DG "C1'" "H1'" sing N N 184 DG N9 C8 sing Y N 185 DG N9 C4 sing Y N 186 DG C8 N7 doub Y N 187 DG C8 H8 sing N N 188 DG N7 C5 sing Y N 189 DG C5 C6 sing N N 190 DG C5 C4 doub Y N 191 DG C6 O6 doub N N 192 DG C6 N1 sing N N 193 DG N1 C2 sing N N 194 DG N1 H1 sing N N 195 DG C2 N2 sing N N 196 DG C2 N3 doub N N 197 DG N2 H21 sing N N 198 DG N2 H22 sing N N 199 DG N3 C4 sing N N 200 DT OP3 P sing N N 201 DT OP3 HOP3 sing N N 202 DT P OP1 doub N N 203 DT P OP2 sing N N 204 DT P "O5'" sing N N 205 DT OP2 HOP2 sing N N 206 DT "O5'" "C5'" sing N N 207 DT "C5'" "C4'" sing N N 208 DT "C5'" "H5'" sing N N 209 DT "C5'" "H5''" sing N N 210 DT "C4'" "O4'" sing N N 211 DT "C4'" "C3'" sing N N 212 DT "C4'" "H4'" sing N N 213 DT "O4'" "C1'" sing N N 214 DT "C3'" "O3'" sing N N 215 DT "C3'" "C2'" sing N N 216 DT "C3'" "H3'" sing N N 217 DT "O3'" "HO3'" sing N N 218 DT "C2'" "C1'" sing N N 219 DT "C2'" "H2'" sing N N 220 DT "C2'" "H2''" sing N N 221 DT "C1'" N1 sing N N 222 DT "C1'" "H1'" sing N N 223 DT N1 C2 sing N N 224 DT N1 C6 sing N N 225 DT C2 O2 doub N N 226 DT C2 N3 sing N N 227 DT N3 C4 sing N N 228 DT N3 H3 sing N N 229 DT C4 O4 doub N N 230 DT C4 C5 sing N N 231 DT C5 C7 sing N N 232 DT C5 C6 doub N N 233 DT C7 H71 sing N N 234 DT C7 H72 sing N N 235 DT C7 H73 sing N N 236 DT C6 H6 sing N N 237 GLN N CA sing N N 238 GLN N H sing N N 239 GLN N H2 sing N N 240 GLN CA C sing N N 241 GLN CA CB sing N N 242 GLN CA HA sing N N 243 GLN C O doub N N 244 GLN C OXT sing N N 245 GLN CB CG sing N N 246 GLN CB HB2 sing N N 247 GLN CB HB3 sing N N 248 GLN CG CD sing N N 249 GLN CG HG2 sing N N 250 GLN CG HG3 sing N N 251 GLN CD OE1 doub N N 252 GLN CD NE2 sing N N 253 GLN NE2 HE21 sing N N 254 GLN NE2 HE22 sing N N 255 GLN OXT HXT sing N N 256 GLU N CA sing N N 257 GLU N H sing N N 258 GLU N H2 sing N N 259 GLU CA C sing N N 260 GLU CA CB sing N N 261 GLU CA HA sing N N 262 GLU C O doub N N 263 GLU C OXT sing N N 264 GLU CB CG sing N N 265 GLU CB HB2 sing N N 266 GLU CB HB3 sing N N 267 GLU CG CD sing N N 268 GLU CG HG2 sing N N 269 GLU CG HG3 sing N N 270 GLU CD OE1 doub N N 271 GLU CD OE2 sing N N 272 GLU OE2 HE2 sing N N 273 GLU OXT HXT sing N N 274 GLY N CA sing N N 275 GLY N H sing N N 276 GLY N H2 sing N N 277 GLY CA C sing N N 278 GLY CA HA2 sing N N 279 GLY CA HA3 sing N N 280 GLY C O doub N N 281 GLY C OXT sing N N 282 GLY OXT HXT sing N N 283 HIS N CA sing N N 284 HIS N H sing N N 285 HIS N H2 sing N N 286 HIS CA C sing N N 287 HIS CA CB sing N N 288 HIS CA HA sing N N 289 HIS C O doub N N 290 HIS C OXT sing N N 291 HIS CB CG sing N N 292 HIS CB HB2 sing N N 293 HIS CB HB3 sing N N 294 HIS CG ND1 sing Y N 295 HIS CG CD2 doub Y N 296 HIS ND1 CE1 doub Y N 297 HIS ND1 HD1 sing N N 298 HIS CD2 NE2 sing Y N 299 HIS CD2 HD2 sing N N 300 HIS CE1 NE2 sing Y N 301 HIS CE1 HE1 sing N N 302 HIS NE2 HE2 sing N N 303 HIS OXT HXT sing N N 304 HOH O H1 sing N N 305 HOH O H2 sing N N 306 ILE N CA sing N N 307 ILE N H sing N N 308 ILE N H2 sing N N 309 ILE CA C sing N N 310 ILE CA CB sing N N 311 ILE CA HA sing N N 312 ILE C O doub N N 313 ILE C OXT sing N N 314 ILE CB CG1 sing N N 315 ILE CB CG2 sing N N 316 ILE CB HB sing N N 317 ILE CG1 CD1 sing N N 318 ILE CG1 HG12 sing N N 319 ILE CG1 HG13 sing N N 320 ILE CG2 HG21 sing N N 321 ILE CG2 HG22 sing N N 322 ILE CG2 HG23 sing N N 323 ILE CD1 HD11 sing N N 324 ILE CD1 HD12 sing N N 325 ILE CD1 HD13 sing N N 326 ILE OXT HXT sing N N 327 LEU N CA sing N N 328 LEU N H sing N N 329 LEU N H2 sing N N 330 LEU CA C sing N N 331 LEU CA CB sing N N 332 LEU CA HA sing N N 333 LEU C O doub N N 334 LEU C OXT sing N N 335 LEU CB CG sing N N 336 LEU CB HB2 sing N N 337 LEU CB HB3 sing N N 338 LEU CG CD1 sing N N 339 LEU CG CD2 sing N N 340 LEU CG HG sing N N 341 LEU CD1 HD11 sing N N 342 LEU CD1 HD12 sing N N 343 LEU CD1 HD13 sing N N 344 LEU CD2 HD21 sing N N 345 LEU CD2 HD22 sing N N 346 LEU CD2 HD23 sing N N 347 LEU OXT HXT sing N N 348 LYS N CA sing N N 349 LYS N H sing N N 350 LYS N H2 sing N N 351 LYS CA C sing N N 352 LYS CA CB sing N N 353 LYS CA HA sing N N 354 LYS C O doub N N 355 LYS C OXT sing N N 356 LYS CB CG sing N N 357 LYS CB HB2 sing N N 358 LYS CB HB3 sing N N 359 LYS CG CD sing N N 360 LYS CG HG2 sing N N 361 LYS CG HG3 sing N N 362 LYS CD CE sing N N 363 LYS CD HD2 sing N N 364 LYS CD HD3 sing N N 365 LYS CE NZ sing N N 366 LYS CE HE2 sing N N 367 LYS CE HE3 sing N N 368 LYS NZ HZ1 sing N N 369 LYS NZ HZ2 sing N N 370 LYS NZ HZ3 sing N N 371 LYS OXT HXT sing N N 372 MET N CA sing N N 373 MET N H sing N N 374 MET N H2 sing N N 375 MET CA C sing N N 376 MET CA CB sing N N 377 MET CA HA sing N N 378 MET C O doub N N 379 MET C OXT sing N N 380 MET CB CG sing N N 381 MET CB HB2 sing N N 382 MET CB HB3 sing N N 383 MET CG SD sing N N 384 MET CG HG2 sing N N 385 MET CG HG3 sing N N 386 MET SD CE sing N N 387 MET CE HE1 sing N N 388 MET CE HE2 sing N N 389 MET CE HE3 sing N N 390 MET OXT HXT sing N N 391 PHE N CA sing N N 392 PHE N H sing N N 393 PHE N H2 sing N N 394 PHE CA C sing N N 395 PHE CA CB sing N N 396 PHE CA HA sing N N 397 PHE C O doub N N 398 PHE C OXT sing N N 399 PHE CB CG sing N N 400 PHE CB HB2 sing N N 401 PHE CB HB3 sing N N 402 PHE CG CD1 doub Y N 403 PHE CG CD2 sing Y N 404 PHE CD1 CE1 sing Y N 405 PHE CD1 HD1 sing N N 406 PHE CD2 CE2 doub Y N 407 PHE CD2 HD2 sing N N 408 PHE CE1 CZ doub Y N 409 PHE CE1 HE1 sing N N 410 PHE CE2 CZ sing Y N 411 PHE CE2 HE2 sing N N 412 PHE CZ HZ sing N N 413 PHE OXT HXT sing N N 414 PRO N CA sing N N 415 PRO N CD sing N N 416 PRO N H sing N N 417 PRO CA C sing N N 418 PRO CA CB sing N N 419 PRO CA HA sing N N 420 PRO C O doub N N 421 PRO C OXT sing N N 422 PRO CB CG sing N N 423 PRO CB HB2 sing N N 424 PRO CB HB3 sing N N 425 PRO CG CD sing N N 426 PRO CG HG2 sing N N 427 PRO CG HG3 sing N N 428 PRO CD HD2 sing N N 429 PRO CD HD3 sing N N 430 PRO OXT HXT sing N N 431 SER N CA sing N N 432 SER N H sing N N 433 SER N H2 sing N N 434 SER CA C sing N N 435 SER CA CB sing N N 436 SER CA HA sing N N 437 SER C O doub N N 438 SER C OXT sing N N 439 SER CB OG sing N N 440 SER CB HB2 sing N N 441 SER CB HB3 sing N N 442 SER OG HG sing N N 443 SER OXT HXT sing N N 444 SO4 S O1 doub N N 445 SO4 S O2 doub N N 446 SO4 S O3 sing N N 447 SO4 S O4 sing N N 448 THR N CA sing N N 449 THR N H sing N N 450 THR N H2 sing N N 451 THR CA C sing N N 452 THR CA CB sing N N 453 THR CA HA sing N N 454 THR C O doub N N 455 THR C OXT sing N N 456 THR CB OG1 sing N N 457 THR CB CG2 sing N N 458 THR CB HB sing N N 459 THR OG1 HG1 sing N N 460 THR CG2 HG21 sing N N 461 THR CG2 HG22 sing N N 462 THR CG2 HG23 sing N N 463 THR OXT HXT sing N N 464 TYR N CA sing N N 465 TYR N H sing N N 466 TYR N H2 sing N N 467 TYR CA C sing N N 468 TYR CA CB sing N N 469 TYR CA HA sing N N 470 TYR C O doub N N 471 TYR C OXT sing N N 472 TYR CB CG sing N N 473 TYR CB HB2 sing N N 474 TYR CB HB3 sing N N 475 TYR CG CD1 doub Y N 476 TYR CG CD2 sing Y N 477 TYR CD1 CE1 sing Y N 478 TYR CD1 HD1 sing N N 479 TYR CD2 CE2 doub Y N 480 TYR CD2 HD2 sing N N 481 TYR CE1 CZ doub Y N 482 TYR CE1 HE1 sing N N 483 TYR CE2 CZ sing Y N 484 TYR CE2 HE2 sing N N 485 TYR CZ OH sing N N 486 TYR OH HH sing N N 487 TYR OXT HXT sing N N 488 VAL N CA sing N N 489 VAL N H sing N N 490 VAL N H2 sing N N 491 VAL CA C sing N N 492 VAL CA CB sing N N 493 VAL CA HA sing N N 494 VAL C O doub N N 495 VAL C OXT sing N N 496 VAL CB CG1 sing N N 497 VAL CB CG2 sing N N 498 VAL CB HB sing N N 499 VAL CG1 HG11 sing N N 500 VAL CG1 HG12 sing N N 501 VAL CG1 HG13 sing N N 502 VAL CG2 HG21 sing N N 503 VAL CG2 HG22 sing N N 504 VAL CG2 HG23 sing N N 505 VAL OXT HXT sing N N 506 # _ndb_struct_conf_na.entry_id 5K5J _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 C DG 12 1_555 -0.213 -0.245 0.303 -5.499 -10.705 -2.942 1 B_DC1:DG12_C B 1 ? C 12 ? 19 1 1 B DC 2 1_555 C DG 11 1_555 0.276 -0.132 0.095 2.470 -14.665 3.821 2 B_DC2:DG11_C B 2 ? C 11 ? 19 1 1 B DC 3 1_555 C DG 10 1_555 0.261 -0.107 0.275 -3.596 -14.701 -0.428 3 B_DC3:DG10_C B 3 ? C 10 ? 19 1 1 B DT 4 1_555 C DA 9 1_555 -0.127 -0.105 0.307 -4.190 -7.623 -0.151 4 B_DT4:DA9_C B 4 ? C 9 ? 20 1 1 B DG 5 1_555 C DC 8 1_555 -0.328 0.038 0.182 6.977 -5.875 3.974 5 B_DG5:DC8_C B 5 ? C 8 ? 19 1 1 B DC 6 1_555 C DG 7 1_555 0.065 0.008 0.172 1.217 -16.143 2.629 6 B_DC6:DG7_C B 6 ? C 7 ? 19 1 1 B DT 7 1_555 C DA 6 1_555 -0.151 -0.079 0.263 -8.780 -15.658 1.419 7 B_DT7:DA6_C B 7 ? C 6 ? 20 1 1 B DG 8 1_555 C DC 5 1_555 -0.187 -0.051 0.276 13.906 -5.327 1.930 8 B_DG8:DC5_C B 8 ? C 5 ? 19 1 1 B DG 9 1_555 C DC 4 1_555 -0.245 -0.073 0.585 12.137 -12.882 -0.546 9 B_DG9:DC4_C B 9 ? C 4 ? 19 1 1 B DC 10 1_555 C DG 3 1_555 0.329 -0.176 0.250 3.501 -16.766 -0.550 10 B_DC10:DG3_C B 10 ? C 3 ? 19 1 1 B DA 11 1_555 C DT 2 1_555 -0.226 0.035 0.355 -1.193 -11.220 2.221 11 B_DA11:DT2_C B 11 ? C 2 ? 20 1 1 B DA 12 1_555 C DT 1 1_555 0.223 -0.221 0.459 12.830 -19.229 6.032 12 B_DA12:DT1_C B 12 ? C 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 C DG 12 1_555 B DC 2 1_555 C DG 11 1_555 0.536 -0.142 3.235 6.440 0.463 36.009 -0.290 0.035 3.277 0.741 -10.315 36.565 1 BB_DC1DC2:DG11DG12_CC B 1 ? C 12 ? B 2 ? C 11 ? 1 B DC 2 1_555 C DG 11 1_555 B DC 3 1_555 C DG 10 1_555 -0.412 -0.163 3.480 -1.097 2.448 34.364 -0.679 0.514 3.471 4.135 1.854 34.465 2 BB_DC2DC3:DG10DG11_CC B 2 ? C 11 ? B 3 ? C 10 ? 1 B DC 3 1_555 C DG 10 1_555 B DT 4 1_555 C DA 9 1_555 0.692 -0.444 3.334 1.378 -0.954 33.961 -0.603 -0.957 3.370 -1.632 -2.357 34.001 3 BB_DC3DT4:DA9DG10_CC B 3 ? C 10 ? B 4 ? C 9 ? 1 B DT 4 1_555 C DA 9 1_555 B DG 5 1_555 C DC 8 1_555 0.549 0.126 3.185 1.098 6.424 30.060 -0.997 -0.824 3.161 12.205 -2.086 30.743 4 BB_DT4DG5:DC8DA9_CC B 4 ? C 9 ? B 5 ? C 8 ? 1 B DG 5 1_555 C DC 8 1_555 B DC 6 1_555 C DG 7 1_555 -0.693 -0.732 3.398 -0.037 4.143 33.141 -1.977 1.199 3.286 7.228 0.064 33.392 5 BB_DG5DC6:DG7DC8_CC B 5 ? C 8 ? B 6 ? C 7 ? 1 B DC 6 1_555 C DG 7 1_555 B DT 7 1_555 C DA 6 1_555 -0.097 -0.550 3.486 1.211 1.095 36.377 -1.041 0.334 3.464 1.752 -1.939 36.412 6 BB_DC6DT7:DA6DG7_CC B 6 ? C 7 ? B 7 ? C 6 ? 1 B DT 7 1_555 C DA 6 1_555 B DG 8 1_555 C DC 5 1_555 0.368 1.336 2.903 -0.788 5.082 30.980 1.593 -0.817 3.068 9.433 1.463 31.393 7 BB_DT7DG8:DC5DA6_CC B 7 ? C 6 ? B 8 ? C 5 ? 1 B DG 8 1_555 C DC 5 1_555 B DG 9 1_555 C DC 4 1_555 -0.969 -0.086 3.258 -4.817 3.340 35.927 -0.610 0.872 3.334 5.371 7.745 36.387 8 BB_DG8DG9:DC4DC5_CC B 8 ? C 5 ? B 9 ? C 4 ? 1 B DG 9 1_555 C DC 4 1_555 B DC 10 1_555 C DG 3 1_555 0.528 -0.357 3.434 4.968 0.615 38.353 -0.620 -0.151 3.467 0.931 -7.523 38.666 9 BB_DG9DC10:DG3DC4_CC B 9 ? C 4 ? B 10 ? C 3 ? 1 B DC 10 1_555 C DG 3 1_555 B DA 11 1_555 C DT 2 1_555 0.381 1.437 3.494 1.214 -7.077 40.705 2.823 -0.406 3.220 -10.079 -1.728 41.307 10 BB_DC10DA11:DT2DG3_CC B 10 ? C 3 ? B 11 ? C 2 ? 1 B DA 11 1_555 C DT 2 1_555 B DA 12 1_555 C DT 1 1_555 0.198 0.148 3.067 -2.563 9.430 35.503 -0.976 -0.643 2.987 15.115 4.108 36.782 11 BB_DA11DA12:DT1DT2_CC B 11 ? C 2 ? B 12 ? C 1 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM049245 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 'SULFATE ION' SO4 6 'ACETATE ION' ACT 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5K5I _pdbx_initial_refinement_model.details ? #