data_5MXY # _entry.id 5MXY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.350 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5MXY pdb_00005mxy 10.2210/pdb5mxy/pdb WWPDB D_1200003203 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5MXY _pdbx_database_status.recvd_initial_deposition_date 2017-01-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Mohd, A.' 1 ? 'Barends, T.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acs Omega' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2470-1343 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 6 _citation.language ? _citation.page_first 21457 _citation.page_last 21464 _citation.title 'Specificity of Small c -Type Cytochromes in Anaerobic Ammonium Oxidation.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acsomega.1c02275 _citation.pdbx_database_id_PubMed 34471748 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Akram, M.' 1 ? primary 'Bock, J.' 2 ? primary 'Dietl, A.' 3 ? primary 'Barends, T.R.M.' 4 0000-0002-9488-3005 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5MXY _cell.details ? _cell.formula_units_Z ? _cell.length_a 47.820 _cell.length_a_esd ? _cell.length_b 47.820 _cell.length_b_esd ? _cell.length_c 99.930 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MXY _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cytochrome c-552 Ks_3358' 9518.926 1 ? ? ? ? 2 non-polymer syn 'HEME C' 618.503 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 10 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 5 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 6 water nat water 18.015 69 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Similar to cytochrome c6' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SNIDGMKLYLQHCKTCHGVDGNPTDLGEGLGARKFADAEWQAKTSDERIIEQINEGTPEMMMPFKEKLTPEEVKALVPVV RGFKK ; _entity_poly.pdbx_seq_one_letter_code_can ;SNIDGMKLYLQHCKTCHGVDGNPTDLGEGLGARKFADAEWQAKTSDERIIEQINEGTPEMMMPFKEKLTPEEVKALVPVV RGFKK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ILE n 1 4 ASP n 1 5 GLY n 1 6 MET n 1 7 LYS n 1 8 LEU n 1 9 TYR n 1 10 LEU n 1 11 GLN n 1 12 HIS n 1 13 CYS n 1 14 LYS n 1 15 THR n 1 16 CYS n 1 17 HIS n 1 18 GLY n 1 19 VAL n 1 20 ASP n 1 21 GLY n 1 22 ASN n 1 23 PRO n 1 24 THR n 1 25 ASP n 1 26 LEU n 1 27 GLY n 1 28 GLU n 1 29 GLY n 1 30 LEU n 1 31 GLY n 1 32 ALA n 1 33 ARG n 1 34 LYS n 1 35 PHE n 1 36 ALA n 1 37 ASP n 1 38 ALA n 1 39 GLU n 1 40 TRP n 1 41 GLN n 1 42 ALA n 1 43 LYS n 1 44 THR n 1 45 SER n 1 46 ASP n 1 47 GLU n 1 48 ARG n 1 49 ILE n 1 50 ILE n 1 51 GLU n 1 52 GLN n 1 53 ILE n 1 54 ASN n 1 55 GLU n 1 56 GLY n 1 57 THR n 1 58 PRO n 1 59 GLU n 1 60 MET n 1 61 MET n 1 62 MET n 1 63 PRO n 1 64 PHE n 1 65 LYS n 1 66 GLU n 1 67 LYS n 1 68 LEU n 1 69 THR n 1 70 PRO n 1 71 GLU n 1 72 GLU n 1 73 VAL n 1 74 LYS n 1 75 ALA n 1 76 LEU n 1 77 VAL n 1 78 PRO n 1 79 VAL n 1 80 VAL n 1 81 ARG n 1 82 GLY n 1 83 PHE n 1 84 LYS n 1 85 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 85 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene kustc0563 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Candidatus Kuenenia stuttgartiensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 174633 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Shewanella oneidensis MR-1' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 211586 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q30JB5_9BACT _struct_ref.pdbx_db_accession Q30JB5 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SNIDGMKLYLQHCKTCHGVDGNPTDLGEGLGARKFADAEWQAKTSDERIIEQINEGTPEMMMPFKEKLTPEEVKALVPVV RGFKK ; _struct_ref.pdbx_align_begin 31 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5MXY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 85 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q30JB5 _struct_ref_seq.db_align_beg 31 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 115 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 31 _struct_ref_seq.pdbx_auth_seq_align_end 115 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEC non-polymer . 'HEME C' ? 'C34 H34 Fe N4 O4' 618.503 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5MXY _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.00 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 59.01 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M Zn-acetate, 0.1 M MES pH 6.0, 10% w/v PEG 8000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-01-02 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si 111' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5MXY _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.9 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 9541 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.9 _reflns_shell.d_res_low 2.0 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.54 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1329 _reflns_shell.percent_possible_all 98.7 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 6.9 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.823 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 16.66 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] 16.66 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] -33.32 _refine.B_iso_max ? _refine.B_iso_mean 49.073 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.970 _refine.correlation_coeff_Fo_to_Fc_free 0.961 _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5MXY _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.90 _refine.ls_d_res_low 43.14 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 9040 _refine.ls_number_reflns_R_free 489 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.14 _refine.ls_percent_reflns_R_free 5.1 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.20041 _refine.ls_R_factor_R_free 0.22978 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.19870 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.030 _refine.pdbx_overall_ESU_R_Free 0.028 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 2.520 _refine.overall_SU_ML 0.078 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 643 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 61 _refine_hist.number_atoms_solvent 69 _refine_hist.number_atoms_total 773 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 43.14 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 0.019 715 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.289 2.070 968 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 4.691 5.000 82 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 32.342 25.517 29 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 15.166 15.000 122 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 14.622 15.000 3 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.089 0.200 95 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.021 542 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 1.832 4.687 332 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.932 7.001 412 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 2.273 4.818 383 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 6.379 64.563 1141 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.900 _refine_ls_shell.d_res_low 1.950 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 36 _refine_ls_shell.number_reflns_R_work 657 _refine_ls_shell.percent_reflns_obs 99.14 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.331 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.339 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5MXY _struct.title 'KustC0563 c-type cytochrome' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5MXY _struct_keywords.text 'cytochrome, anammox, electron transport' _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 4 ? N N N 5 ? O N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 4 ? CYS A 13 ? ASP A 34 CYS A 43 1 ? 10 HELX_P HELX_P2 AA2 CYS A 13 ? GLY A 18 ? CYS A 43 GLY A 48 1 ? 6 HELX_P HELX_P3 AA3 THR A 24 ? GLY A 31 ? THR A 54 GLY A 61 1 ? 8 HELX_P HELX_P4 AA4 ASP A 37 ? THR A 44 ? ASP A 67 THR A 74 1 ? 8 HELX_P HELX_P5 AA5 SER A 45 ? GLY A 56 ? SER A 75 GLY A 86 1 ? 12 HELX_P HELX_P6 AA6 THR A 69 ? GLY A 82 ? THR A 99 GLY A 112 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale none ? A CYS 13 SG ? ? ? 1_555 B HEC . CAB ? ? A CYS 43 A HEC 200 1_555 ? ? ? ? ? ? ? 1.789 ? ? covale2 covale none ? A CYS 16 SG ? ? ? 1_555 B HEC . CAC ? ? A CYS 46 A HEC 200 1_555 ? ? ? ? ? ? ? 1.818 ? ? metalc1 metalc ? ? A HIS 12 ND1 ? ? ? 1_555 I ZN . ZN ? ? A HIS 42 A ZN 207 1_555 ? ? ? ? ? ? ? 2.326 ? ? metalc2 metalc ? ? A HIS 12 NE2 ? ? ? 1_555 J ZN . ZN ? ? A HIS 42 A ZN 208 1_555 ? ? ? ? ? ? ? 2.356 ? ? metalc3 metalc ? ? A HIS 17 NE2 ? ? ? 1_555 B HEC . FE ? ? A HIS 47 A HEC 200 1_555 ? ? ? ? ? ? ? 2.080 ? ? metalc4 metalc ? ? A ASP 25 OD1 ? ? ? 1_555 L ZN . ZN ? ? A ASP 55 A ZN 210 7_555 ? ? ? ? ? ? ? 2.448 ? ? metalc5 metalc ? ? A GLU 28 OE2 ? ? ? 1_555 G ZN . ZN ? ? A GLU 58 A ZN 205 5_444 ? ? ? ? ? ? ? 2.559 ? ? metalc6 metalc ? ? A ASP 37 OD1 ? ? ? 1_555 D ZN . ZN ? ? A ASP 67 A ZN 202 1_555 ? ? ? ? ? ? ? 2.666 ? ? metalc7 metalc ? ? A ASP 46 OD2 ? ? ? 1_555 F ZN . ZN ? ? A ASP 76 A ZN 204 1_555 ? ? ? ? ? ? ? 2.056 ? ? metalc8 metalc ? ? A ASP 46 OD2 ? ? ? 1_555 F ZN . ZN ? ? A ASP 76 A ZN 204 8_554 ? ? ? ? ? ? ? 1.921 ? ? metalc9 metalc ? ? A GLU 47 OE1 ? ? ? 1_555 E ZN . ZN ? ? A GLU 77 A ZN 203 3_454 ? ? ? ? ? ? ? 2.061 ? ? metalc10 metalc ? ? A GLU 51 OE1 ? ? ? 1_555 G ZN . ZN ? ? A GLU 81 A ZN 205 1_555 ? ? ? ? ? ? ? 2.203 ? ? metalc11 metalc ? ? A GLU 51 OE2 ? ? ? 1_555 H ZN . ZN ? ? A GLU 81 A ZN 206 1_555 ? ? ? ? ? ? ? 2.328 ? ? metalc12 metalc ? ? A GLU 55 OE1 ? ? ? 1_555 G ZN . ZN ? ? A GLU 85 A ZN 205 1_555 ? ? ? ? ? ? ? 2.135 ? ? metalc13 metalc ? ? A GLU 59 OE2 ? ? ? 1_555 E ZN . ZN ? ? A GLU 89 A ZN 203 1_555 ? ? ? ? ? ? ? 2.210 ? ? metalc14 metalc ? ? A MET 61 SD ? ? ? 1_555 B HEC . FE ? ? A MET 91 A HEC 200 1_555 ? ? ? ? ? ? ? 2.146 ? ? metalc15 metalc ? ? A GLU 66 OE2 ? ? ? 1_555 D ZN . ZN ? ? A GLU 96 A ZN 202 5_454 ? ? ? ? ? ? ? 2.054 ? ? metalc16 metalc ? ? A GLU 71 OE1 ? ? ? 1_555 C ZN . ZN ? ? A GLU 101 A ZN 201 5_454 ? ? ? ? ? ? ? 2.090 ? ? metalc17 metalc ? ? A GLU 71 OE2 ? ? ? 1_555 C ZN . ZN ? ? A GLU 101 A ZN 201 5_454 ? ? ? ? ? ? ? 2.605 ? ? metalc18 metalc ? ? B HEC . O1D ? ? ? 1_555 C ZN . ZN ? ? A HEC 200 A ZN 201 1_555 ? ? ? ? ? ? ? 2.149 ? ? metalc19 metalc ? ? C ZN . ZN ? ? ? 1_555 O HOH . O ? ? A ZN 201 A HOH 302 1_555 ? ? ? ? ? ? ? 2.156 ? ? metalc20 metalc ? ? C ZN . ZN ? ? ? 1_555 O HOH . O ? ? A ZN 201 A HOH 326 1_555 ? ? ? ? ? ? ? 2.056 ? ? metalc21 metalc ? ? C ZN . ZN ? ? ? 1_555 O HOH . O ? ? A ZN 201 A HOH 333 5_444 ? ? ? ? ? ? ? 2.008 ? ? metalc22 metalc ? ? E ZN . ZN ? ? ? 1_555 O HOH . O ? ? A ZN 203 A HOH 309 7_555 ? ? ? ? ? ? ? 2.370 ? ? metalc23 metalc ? ? E ZN . ZN ? ? ? 1_555 O HOH . O ? ? A ZN 203 A HOH 311 7_555 ? ? ? ? ? ? ? 2.356 ? ? metalc24 metalc ? ? F ZN . ZN ? ? ? 1_555 N ACT . O ? ? A ZN 204 A ACT 212 1_555 ? ? ? ? ? ? ? 2.251 ? ? metalc25 metalc ? ? F ZN . ZN ? ? ? 1_555 N ACT . O ? ? A ZN 204 A ACT 212 8_554 ? ? ? ? ? ? ? 1.838 ? ? metalc26 metalc ? ? G ZN . ZN ? ? ? 1_555 O HOH . O ? ? A ZN 205 A HOH 357 5_454 ? ? ? ? ? ? ? 2.180 ? ? metalc27 metalc ? ? H ZN . ZN ? ? ? 1_555 O HOH . O ? ? A ZN 206 A HOH 342 1_555 ? ? ? ? ? ? ? 2.072 ? ? metalc28 metalc ? ? H ZN . ZN ? ? ? 1_555 O HOH . O ? ? A ZN 206 A HOH 346 1_555 ? ? ? ? ? ? ? 2.054 ? ? metalc29 metalc ? ? I ZN . ZN ? ? ? 1_555 O HOH . O ? ? A ZN 207 A HOH 351 1_555 ? ? ? ? ? ? ? 2.357 ? ? metalc30 metalc ? ? J ZN . ZN ? ? ? 1_555 O HOH . O ? ? A ZN 208 A HOH 348 1_555 ? ? ? ? ? ? ? 2.307 ? ? metalc31 metalc ? ? L ZN . ZN ? ? ? 1_555 O HOH . O ? ? A ZN 210 A HOH 301 4_445 ? ? ? ? ? ? ? 2.027 ? ? metalc32 metalc ? ? L ZN . ZN ? ? ? 1_555 O HOH . O ? ? A ZN 210 A HOH 309 7_555 ? ? ? ? ? ? ? 2.641 ? ? metalc33 metalc ? ? L ZN . ZN ? ? ? 1_555 O HOH . O ? ? A ZN 210 A HOH 315 7_555 ? ? ? ? ? ? ? 2.505 ? ? metalc34 metalc ? ? L ZN . ZN ? ? ? 1_555 O HOH . O ? ? A ZN 210 A HOH 344 1_555 ? ? ? ? ? ? ? 2.162 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A HEC 200 ? 24 'binding site for residue HEC A 200' AC2 Software A ZN 201 ? 5 'binding site for residue ZN A 201' AC3 Software A ZN 202 ? 2 'binding site for residue ZN A 202' AC4 Software A ZN 203 ? 7 'binding site for residue ZN A 203' AC5 Software A ZN 204 ? 4 'binding site for residue ZN A 204' AC6 Software A ZN 205 ? 4 'binding site for residue ZN A 205' AC7 Software A ZN 206 ? 5 'binding site for residue ZN A 206' AC8 Software A ZN 207 ? 2 'binding site for residue ZN A 207' AC9 Software A ZN 208 ? 3 'binding site for residue ZN A 208' AD1 Software A ZN 209 ? 3 'binding site for residue ZN A 209' AD2 Software A ZN 210 ? 8 'binding site for residue ZN A 210' AD3 Software A EDO 211 ? 5 'binding site for residue EDO A 211' AD4 Software A ACT 212 ? 7 'binding site for residue ACT A 212' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 24 HIS A 12 ? HIS A 42 . ? 1_555 ? 2 AC1 24 CYS A 13 ? CYS A 43 . ? 1_555 ? 3 AC1 24 CYS A 16 ? CYS A 46 . ? 1_555 ? 4 AC1 24 HIS A 17 ? HIS A 47 . ? 1_555 ? 5 AC1 24 LEU A 30 ? LEU A 60 . ? 1_555 ? 6 AC1 24 GLY A 31 ? GLY A 61 . ? 1_555 ? 7 AC1 24 ALA A 32 ? ALA A 62 . ? 1_555 ? 8 AC1 24 PHE A 35 ? PHE A 65 . ? 1_555 ? 9 AC1 24 TRP A 40 ? TRP A 70 . ? 1_555 ? 10 AC1 24 ARG A 48 ? ARG A 78 . ? 1_555 ? 11 AC1 24 GLN A 52 ? GLN A 82 . ? 1_555 ? 12 AC1 24 ILE A 53 ? ILE A 83 . ? 1_555 ? 13 AC1 24 THR A 57 ? THR A 87 . ? 1_555 ? 14 AC1 24 MET A 60 ? MET A 90 . ? 1_555 ? 15 AC1 24 MET A 61 ? MET A 91 . ? 1_555 ? 16 AC1 24 MET A 62 ? MET A 92 . ? 1_555 ? 17 AC1 24 PHE A 64 ? PHE A 94 . ? 1_555 ? 18 AC1 24 PRO A 70 ? PRO A 100 . ? 5_444 ? 19 AC1 24 GLU A 71 ? GLU A 101 . ? 5_444 ? 20 AC1 24 ZN C . ? ZN A 201 . ? 1_555 ? 21 AC1 24 HOH O . ? HOH A 317 . ? 1_555 ? 22 AC1 24 HOH O . ? HOH A 318 . ? 1_555 ? 23 AC1 24 HOH O . ? HOH A 323 . ? 1_555 ? 24 AC1 24 HOH O . ? HOH A 326 . ? 1_555 ? 25 AC2 5 GLU A 71 ? GLU A 101 . ? 5_444 ? 26 AC2 5 HEC B . ? HEC A 200 . ? 1_555 ? 27 AC2 5 HOH O . ? HOH A 302 . ? 1_555 ? 28 AC2 5 HOH O . ? HOH A 326 . ? 1_555 ? 29 AC2 5 HOH O . ? HOH A 333 . ? 5_444 ? 30 AC3 2 ASP A 37 ? ASP A 67 . ? 1_555 ? 31 AC3 2 GLU A 66 ? GLU A 96 . ? 5_444 ? 32 AC4 7 ASP A 25 ? ASP A 55 . ? 7_555 ? 33 AC4 7 GLU A 47 ? GLU A 77 . ? 4_445 ? 34 AC4 7 GLU A 59 ? GLU A 89 . ? 1_555 ? 35 AC4 7 ZN L . ? ZN A 210 . ? 1_555 ? 36 AC4 7 HOH O . ? HOH A 301 . ? 4_445 ? 37 AC4 7 HOH O . ? HOH A 309 . ? 7_555 ? 38 AC4 7 HOH O . ? HOH A 311 . ? 7_555 ? 39 AC5 4 ASP A 46 ? ASP A 76 . ? 1_555 ? 40 AC5 4 ASP A 46 ? ASP A 76 . ? 8_554 ? 41 AC5 4 ACT N . ? ACT A 212 . ? 1_555 ? 42 AC5 4 ACT N . ? ACT A 212 . ? 8_554 ? 43 AC6 4 GLU A 28 ? GLU A 58 . ? 5_454 ? 44 AC6 4 GLU A 51 ? GLU A 81 . ? 1_555 ? 45 AC6 4 GLU A 55 ? GLU A 85 . ? 1_555 ? 46 AC6 4 HOH O . ? HOH A 357 . ? 5_454 ? 47 AC7 5 GLU A 51 ? GLU A 81 . ? 1_555 ? 48 AC7 5 HOH O . ? HOH A 339 . ? 1_555 ? 49 AC7 5 HOH O . ? HOH A 342 . ? 1_555 ? 50 AC7 5 HOH O . ? HOH A 346 . ? 1_555 ? 51 AC7 5 HOH O . ? HOH A 347 . ? 1_555 ? 52 AC8 2 HIS A 12 ? HIS A 42 . ? 1_555 ? 53 AC8 2 HOH O . ? HOH A 351 . ? 1_555 ? 54 AC9 3 GLN A 11 ? GLN A 41 . ? 1_555 ? 55 AC9 3 HIS A 12 ? HIS A 42 . ? 1_555 ? 56 AC9 3 HOH O . ? HOH A 348 . ? 1_555 ? 57 AD1 3 ARG A 48 ? ARG A 78 . ? 1_555 ? 58 AD1 3 GLN A 52 ? GLN A 82 . ? 1_555 ? 59 AD1 3 GLY A 56 ? GLY A 86 . ? 1_555 ? 60 AD2 8 ASP A 25 ? ASP A 55 . ? 7_555 ? 61 AD2 8 GLU A 59 ? GLU A 89 . ? 1_555 ? 62 AD2 8 ZN E . ? ZN A 203 . ? 1_555 ? 63 AD2 8 HOH O . ? HOH A 301 . ? 4_445 ? 64 AD2 8 HOH O . ? HOH A 309 . ? 7_555 ? 65 AD2 8 HOH O . ? HOH A 315 . ? 7_555 ? 66 AD2 8 HOH O . ? HOH A 343 . ? 1_555 ? 67 AD2 8 HOH O . ? HOH A 344 . ? 1_555 ? 68 AD3 5 GLN A 41 ? GLN A 71 . ? 8_554 ? 69 AD3 5 ALA A 42 ? ALA A 72 . ? 8_554 ? 70 AD3 5 THR A 44 ? THR A 74 . ? 8_554 ? 71 AD3 5 SER A 45 ? SER A 75 . ? 8_554 ? 72 AD3 5 ACT N . ? ACT A 212 . ? 1_555 ? 73 AD4 7 ASP A 46 ? ASP A 76 . ? 8_554 ? 74 AD4 7 ASP A 46 ? ASP A 76 . ? 1_555 ? 75 AD4 7 ARG A 81 ? ARG A 111 . ? 8_554 ? 76 AD4 7 ZN F . ? ZN A 204 . ? 1_555 ? 77 AD4 7 ZN F . ? ZN A 204 . ? 8_554 ? 78 AD4 7 EDO M . ? EDO A 211 . ? 1_555 ? 79 AD4 7 HOH O . ? HOH A 325 . ? 1_555 ? # _atom_sites.entry_id 5MXY _atom_sites.fract_transf_matrix[1][1] 0.020912 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020912 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010007 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 31 ? ? ? A . n A 1 2 ASN 2 32 ? ? ? A . n A 1 3 ILE 3 33 34 ILE ILE A . n A 1 4 ASP 4 34 35 ASP ASP A . n A 1 5 GLY 5 35 36 GLY GLY A . n A 1 6 MET 6 36 37 MET MET A . n A 1 7 LYS 7 37 38 LYS LYS A . n A 1 8 LEU 8 38 39 LEU LEU A . n A 1 9 TYR 9 39 40 TYR TYR A . n A 1 10 LEU 10 40 41 LEU LEU A . n A 1 11 GLN 11 41 42 GLN GLN A . n A 1 12 HIS 12 42 43 HIS HIS A . n A 1 13 CYS 13 43 44 CYS CYS A . n A 1 14 LYS 14 44 45 LYS LYS A . n A 1 15 THR 15 45 46 THR THR A . n A 1 16 CYS 16 46 47 CYS CYS A . n A 1 17 HIS 17 47 48 HIS HIS A . n A 1 18 GLY 18 48 49 GLY GLY A . n A 1 19 VAL 19 49 50 VAL VAL A . n A 1 20 ASP 20 50 51 ASP ASP A . n A 1 21 GLY 21 51 52 GLY GLY A . n A 1 22 ASN 22 52 53 ASN ASN A . n A 1 23 PRO 23 53 54 PRO PRO A . n A 1 24 THR 24 54 55 THR THR A . n A 1 25 ASP 25 55 56 ASP ASP A . n A 1 26 LEU 26 56 57 LEU LEU A . n A 1 27 GLY 27 57 58 GLY GLY A . n A 1 28 GLU 28 58 59 GLU GLU A . n A 1 29 GLY 29 59 60 GLY GLY A . n A 1 30 LEU 30 60 61 LEU LEU A . n A 1 31 GLY 31 61 62 GLY GLY A . n A 1 32 ALA 32 62 63 ALA ALA A . n A 1 33 ARG 33 63 64 ARG ARG A . n A 1 34 LYS 34 64 65 LYS LYS A . n A 1 35 PHE 35 65 66 PHE PHE A . n A 1 36 ALA 36 66 67 ALA ALA A . n A 1 37 ASP 37 67 68 ASP ASP A . n A 1 38 ALA 38 68 69 ALA ALA A . n A 1 39 GLU 39 69 70 GLU GLU A . n A 1 40 TRP 40 70 71 TRP TRP A . n A 1 41 GLN 41 71 72 GLN GLN A . n A 1 42 ALA 42 72 73 ALA ALA A . n A 1 43 LYS 43 73 74 LYS LYS A . n A 1 44 THR 44 74 75 THR THR A . n A 1 45 SER 45 75 76 SER SER A . n A 1 46 ASP 46 76 77 ASP ASP A . n A 1 47 GLU 47 77 78 GLU GLU A . n A 1 48 ARG 48 78 79 ARG ARG A . n A 1 49 ILE 49 79 80 ILE ILE A . n A 1 50 ILE 50 80 81 ILE ILE A . n A 1 51 GLU 51 81 82 GLU GLU A . n A 1 52 GLN 52 82 83 GLN GLN A . n A 1 53 ILE 53 83 84 ILE ILE A . n A 1 54 ASN 54 84 85 ASN ASN A . n A 1 55 GLU 55 85 86 GLU GLU A . n A 1 56 GLY 56 86 87 GLY GLY A . n A 1 57 THR 57 87 88 THR THR A . n A 1 58 PRO 58 88 89 PRO PRO A . n A 1 59 GLU 59 89 90 GLU GLU A . n A 1 60 MET 60 90 91 MET MET A . n A 1 61 MET 61 91 92 MET MET A . n A 1 62 MET 62 92 93 MET MET A . n A 1 63 PRO 63 93 94 PRO PRO A . n A 1 64 PHE 64 94 95 PHE PHE A . n A 1 65 LYS 65 95 96 LYS LYS A . n A 1 66 GLU 66 96 97 GLU GLU A . n A 1 67 LYS 67 97 98 LYS LYS A . n A 1 68 LEU 68 98 99 LEU LEU A . n A 1 69 THR 69 99 100 THR THR A . n A 1 70 PRO 70 100 101 PRO PRO A . n A 1 71 GLU 71 101 102 GLU GLU A . n A 1 72 GLU 72 102 103 GLU GLU A . n A 1 73 VAL 73 103 104 VAL VAL A . n A 1 74 LYS 74 104 105 LYS LYS A . n A 1 75 ALA 75 105 106 ALA ALA A . n A 1 76 LEU 76 106 107 LEU LEU A . n A 1 77 VAL 77 107 108 VAL VAL A . n A 1 78 PRO 78 108 109 PRO PRO A . n A 1 79 VAL 79 109 110 VAL VAL A . n A 1 80 VAL 80 110 111 VAL VAL A . n A 1 81 ARG 81 111 112 ARG ARG A . n A 1 82 GLY 82 112 113 GLY GLY A . n A 1 83 PHE 83 113 114 PHE PHE A . n A 1 84 LYS 84 114 115 LYS LYS A . n A 1 85 LYS 85 115 116 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEC 1 200 200 HEC H99 A . C 3 ZN 1 201 201 ZN ZN A . D 3 ZN 1 202 202 ZN ZN A . E 3 ZN 1 203 203 ZN ZN A . F 3 ZN 1 204 204 ZN ZN A . G 3 ZN 1 205 205 ZN ZN A . H 3 ZN 1 206 206 ZN ZN A . I 3 ZN 1 207 207 ZN ZN A . J 3 ZN 1 208 208 ZN ZN A . K 3 ZN 1 209 209 ZN ZN A . L 3 ZN 1 210 210 ZN ZN A . M 4 EDO 1 211 211 EDO EDO A . N 5 ACT 1 212 212 ACT ACT A . O 6 HOH 1 301 244 HOH HOH A . O 6 HOH 2 302 231 HOH HOH A . O 6 HOH 3 303 286 HOH HOH A . O 6 HOH 4 304 240 HOH HOH A . O 6 HOH 5 305 241 HOH HOH A . O 6 HOH 6 306 270 HOH HOH A . O 6 HOH 7 307 224 HOH HOH A . O 6 HOH 8 308 251 HOH HOH A . O 6 HOH 9 309 246 HOH HOH A . O 6 HOH 10 310 223 HOH HOH A . O 6 HOH 11 311 278 HOH HOH A . O 6 HOH 12 312 259 HOH HOH A . O 6 HOH 13 313 250 HOH HOH A . O 6 HOH 14 314 258 HOH HOH A . O 6 HOH 15 315 285 HOH HOH A . O 6 HOH 16 316 268 HOH HOH A . O 6 HOH 17 317 237 HOH HOH A . O 6 HOH 18 318 287 HOH HOH A . O 6 HOH 19 319 220 HOH HOH A . O 6 HOH 20 320 242 HOH HOH A . O 6 HOH 21 321 273 HOH HOH A . O 6 HOH 22 322 254 HOH HOH A . O 6 HOH 23 323 238 HOH HOH A . O 6 HOH 24 324 234 HOH HOH A . O 6 HOH 25 325 263 HOH HOH A . O 6 HOH 26 326 230 HOH HOH A . O 6 HOH 27 327 221 HOH HOH A . O 6 HOH 28 328 260 HOH HOH A . O 6 HOH 29 329 272 HOH HOH A . O 6 HOH 30 330 249 HOH HOH A . O 6 HOH 31 331 253 HOH HOH A . O 6 HOH 32 332 227 HOH HOH A . O 6 HOH 33 333 229 HOH HOH A . O 6 HOH 34 334 289 HOH HOH A . O 6 HOH 35 335 243 HOH HOH A . O 6 HOH 36 336 276 HOH HOH A . O 6 HOH 37 337 255 HOH HOH A . O 6 HOH 38 338 283 HOH HOH A . O 6 HOH 39 339 235 HOH HOH A . O 6 HOH 40 340 226 HOH HOH A . O 6 HOH 41 341 222 HOH HOH A . O 6 HOH 42 342 266 HOH HOH A . O 6 HOH 43 343 245 HOH HOH A . O 6 HOH 44 344 277 HOH HOH A . O 6 HOH 45 345 265 HOH HOH A . O 6 HOH 46 346 232 HOH HOH A . O 6 HOH 47 347 233 HOH HOH A . O 6 HOH 48 348 281 HOH HOH A . O 6 HOH 49 349 228 HOH HOH A . O 6 HOH 50 350 284 HOH HOH A . O 6 HOH 51 351 279 HOH HOH A . O 6 HOH 52 352 288 HOH HOH A . O 6 HOH 53 353 280 HOH HOH A . O 6 HOH 54 354 247 HOH HOH A . O 6 HOH 55 355 269 HOH HOH A . O 6 HOH 56 356 271 HOH HOH A . O 6 HOH 57 357 274 HOH HOH A . O 6 HOH 58 358 282 HOH HOH A . O 6 HOH 59 359 236 HOH HOH A . O 6 HOH 60 360 252 HOH HOH A . O 6 HOH 61 361 248 HOH HOH A . O 6 HOH 62 362 262 HOH HOH A . O 6 HOH 63 363 264 HOH HOH A . O 6 HOH 64 364 261 HOH HOH A . O 6 HOH 65 365 275 HOH HOH A . O 6 HOH 66 366 225 HOH HOH A . O 6 HOH 67 367 257 HOH HOH A . O 6 HOH 68 368 267 HOH HOH A . O 6 HOH 69 369 256 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2280 ? 1 MORE -256 ? 1 'SSA (A^2)' 5460 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 ND1 ? A HIS 12 ? A HIS 42 ? 1_555 ZN ? I ZN . ? A ZN 207 ? 1_555 O ? O HOH . ? A HOH 351 ? 1_555 87.9 ? 2 NE2 ? A HIS 12 ? A HIS 42 ? 1_555 ZN ? J ZN . ? A ZN 208 ? 1_555 O ? O HOH . ? A HOH 348 ? 1_555 83.2 ? 3 NE2 ? A HIS 17 ? A HIS 47 ? 1_555 FE ? B HEC . ? A HEC 200 ? 1_555 NA ? B HEC . ? A HEC 200 ? 1_555 88.6 ? 4 NE2 ? A HIS 17 ? A HIS 47 ? 1_555 FE ? B HEC . ? A HEC 200 ? 1_555 NB ? B HEC . ? A HEC 200 ? 1_555 89.7 ? 5 NA ? B HEC . ? A HEC 200 ? 1_555 FE ? B HEC . ? A HEC 200 ? 1_555 NB ? B HEC . ? A HEC 200 ? 1_555 90.5 ? 6 NE2 ? A HIS 17 ? A HIS 47 ? 1_555 FE ? B HEC . ? A HEC 200 ? 1_555 NC ? B HEC . ? A HEC 200 ? 1_555 90.1 ? 7 NA ? B HEC . ? A HEC 200 ? 1_555 FE ? B HEC . ? A HEC 200 ? 1_555 NC ? B HEC . ? A HEC 200 ? 1_555 178.8 ? 8 NB ? B HEC . ? A HEC 200 ? 1_555 FE ? B HEC . ? A HEC 200 ? 1_555 NC ? B HEC . ? A HEC 200 ? 1_555 89.6 ? 9 NE2 ? A HIS 17 ? A HIS 47 ? 1_555 FE ? B HEC . ? A HEC 200 ? 1_555 ND ? B HEC . ? A HEC 200 ? 1_555 89.3 ? 10 NA ? B HEC . ? A HEC 200 ? 1_555 FE ? B HEC . ? A HEC 200 ? 1_555 ND ? B HEC . ? A HEC 200 ? 1_555 89.2 ? 11 NB ? B HEC . ? A HEC 200 ? 1_555 FE ? B HEC . ? A HEC 200 ? 1_555 ND ? B HEC . ? A HEC 200 ? 1_555 179.0 ? 12 NC ? B HEC . ? A HEC 200 ? 1_555 FE ? B HEC . ? A HEC 200 ? 1_555 ND ? B HEC . ? A HEC 200 ? 1_555 90.7 ? 13 NE2 ? A HIS 17 ? A HIS 47 ? 1_555 FE ? B HEC . ? A HEC 200 ? 1_555 SD ? A MET 61 ? A MET 91 ? 1_555 176.1 ? 14 NA ? B HEC . ? A HEC 200 ? 1_555 FE ? B HEC . ? A HEC 200 ? 1_555 SD ? A MET 61 ? A MET 91 ? 1_555 88.3 ? 15 NB ? B HEC . ? A HEC 200 ? 1_555 FE ? B HEC . ? A HEC 200 ? 1_555 SD ? A MET 61 ? A MET 91 ? 1_555 92.8 ? 16 NC ? B HEC . ? A HEC 200 ? 1_555 FE ? B HEC . ? A HEC 200 ? 1_555 SD ? A MET 61 ? A MET 91 ? 1_555 93.0 ? 17 ND ? B HEC . ? A HEC 200 ? 1_555 FE ? B HEC . ? A HEC 200 ? 1_555 SD ? A MET 61 ? A MET 91 ? 1_555 88.2 ? 18 OD1 ? A ASP 25 ? A ASP 55 ? 1_555 ZN ? L ZN . ? A ZN 210 ? 7_555 O ? O HOH . ? A HOH 301 ? 4_445 71.5 ? 19 OD1 ? A ASP 25 ? A ASP 55 ? 1_555 ZN ? L ZN . ? A ZN 210 ? 7_555 O ? O HOH . ? A HOH 309 ? 7_555 63.6 ? 20 O ? O HOH . ? A HOH 301 ? 4_445 ZN ? L ZN . ? A ZN 210 ? 7_555 O ? O HOH . ? A HOH 309 ? 7_555 8.8 ? 21 OD1 ? A ASP 25 ? A ASP 55 ? 1_555 ZN ? L ZN . ? A ZN 210 ? 7_555 O ? O HOH . ? A HOH 315 ? 7_555 71.4 ? 22 O ? O HOH . ? A HOH 301 ? 4_445 ZN ? L ZN . ? A ZN 210 ? 7_555 O ? O HOH . ? A HOH 315 ? 7_555 6.4 ? 23 O ? O HOH . ? A HOH 309 ? 7_555 ZN ? L ZN . ? A ZN 210 ? 7_555 O ? O HOH . ? A HOH 315 ? 7_555 8.1 ? 24 OD1 ? A ASP 25 ? A ASP 55 ? 1_555 ZN ? L ZN . ? A ZN 210 ? 7_555 O ? O HOH . ? A HOH 344 ? 1_555 64.8 ? 25 O ? O HOH . ? A HOH 301 ? 4_445 ZN ? L ZN . ? A ZN 210 ? 7_555 O ? O HOH . ? A HOH 344 ? 1_555 7.0 ? 26 O ? O HOH . ? A HOH 309 ? 7_555 ZN ? L ZN . ? A ZN 210 ? 7_555 O ? O HOH . ? A HOH 344 ? 1_555 5.6 ? 27 O ? O HOH . ? A HOH 315 ? 7_555 ZN ? L ZN . ? A ZN 210 ? 7_555 O ? O HOH . ? A HOH 344 ? 1_555 10.4 ? 28 OE2 ? A GLU 28 ? A GLU 58 ? 1_555 ZN ? G ZN . ? A ZN 205 ? 5_444 OE1 ? A GLU 51 ? A GLU 81 ? 1_555 74.3 ? 29 OE2 ? A GLU 28 ? A GLU 58 ? 1_555 ZN ? G ZN . ? A ZN 205 ? 5_444 OE1 ? A GLU 55 ? A GLU 85 ? 1_555 67.0 ? 30 OE1 ? A GLU 51 ? A GLU 81 ? 1_555 ZN ? G ZN . ? A ZN 205 ? 5_444 OE1 ? A GLU 55 ? A GLU 85 ? 1_555 7.5 ? 31 OE2 ? A GLU 28 ? A GLU 58 ? 1_555 ZN ? G ZN . ? A ZN 205 ? 5_444 O ? O HOH . ? A HOH 357 ? 5_454 70.4 ? 32 OE1 ? A GLU 51 ? A GLU 81 ? 1_555 ZN ? G ZN . ? A ZN 205 ? 5_444 O ? O HOH . ? A HOH 357 ? 5_454 5.4 ? 33 OE1 ? A GLU 55 ? A GLU 85 ? 1_555 ZN ? G ZN . ? A ZN 205 ? 5_444 O ? O HOH . ? A HOH 357 ? 5_454 6.7 ? 34 OD1 ? A ASP 37 ? A ASP 67 ? 1_555 ZN ? D ZN . ? A ZN 202 ? 1_555 OE2 ? A GLU 66 ? A GLU 96 ? 1_555 26.9 ? 35 OD2 ? A ASP 46 ? A ASP 76 ? 1_555 ZN ? F ZN . ? A ZN 204 ? 1_555 OD2 ? A ASP 46 ? A ASP 76 ? 1_555 0.0 ? 36 OD2 ? A ASP 46 ? A ASP 76 ? 1_555 ZN ? F ZN . ? A ZN 204 ? 1_555 O ? N ACT . ? A ACT 212 ? 1_555 103.4 ? 37 OD2 ? A ASP 46 ? A ASP 76 ? 1_555 ZN ? F ZN . ? A ZN 204 ? 1_555 O ? N ACT . ? A ACT 212 ? 1_555 103.4 ? 38 OD2 ? A ASP 46 ? A ASP 76 ? 1_555 ZN ? F ZN . ? A ZN 204 ? 1_555 O ? N ACT . ? A ACT 212 ? 8_554 128.7 ? 39 OD2 ? A ASP 46 ? A ASP 76 ? 1_555 ZN ? F ZN . ? A ZN 204 ? 1_555 O ? N ACT . ? A ACT 212 ? 8_554 128.7 ? 40 O ? N ACT . ? A ACT 212 ? 1_555 ZN ? F ZN . ? A ZN 204 ? 1_555 O ? N ACT . ? A ACT 212 ? 8_554 85.2 ? 41 OE1 ? A GLU 47 ? A GLU 77 ? 1_555 ZN ? E ZN . ? A ZN 203 ? 3_454 OE2 ? A GLU 59 ? A GLU 89 ? 1_555 59.1 ? 42 OE1 ? A GLU 47 ? A GLU 77 ? 1_555 ZN ? E ZN . ? A ZN 203 ? 3_454 O ? O HOH . ? A HOH 309 ? 7_555 55.2 ? 43 OE2 ? A GLU 59 ? A GLU 89 ? 1_555 ZN ? E ZN . ? A ZN 203 ? 3_454 O ? O HOH . ? A HOH 309 ? 7_555 6.5 ? 44 OE1 ? A GLU 47 ? A GLU 77 ? 1_555 ZN ? E ZN . ? A ZN 203 ? 3_454 O ? O HOH . ? A HOH 311 ? 7_555 56.5 ? 45 OE2 ? A GLU 59 ? A GLU 89 ? 1_555 ZN ? E ZN . ? A ZN 203 ? 3_454 O ? O HOH . ? A HOH 311 ? 7_555 6.8 ? 46 O ? O HOH . ? A HOH 309 ? 7_555 ZN ? E ZN . ? A ZN 203 ? 3_454 O ? O HOH . ? A HOH 311 ? 7_555 1.6 ? 47 OE2 ? A GLU 51 ? A GLU 81 ? 1_555 ZN ? H ZN . ? A ZN 206 ? 1_555 O ? O HOH . ? A HOH 342 ? 1_555 93.8 ? 48 OE2 ? A GLU 51 ? A GLU 81 ? 1_555 ZN ? H ZN . ? A ZN 206 ? 1_555 O ? O HOH . ? A HOH 346 ? 1_555 87.6 ? 49 O ? O HOH . ? A HOH 342 ? 1_555 ZN ? H ZN . ? A ZN 206 ? 1_555 O ? O HOH . ? A HOH 346 ? 1_555 160.4 ? 50 OE1 ? A GLU 71 ? A GLU 101 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 5_454 OE2 ? A GLU 71 ? A GLU 101 ? 1_555 54.3 ? 51 OE1 ? A GLU 71 ? A GLU 101 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 5_454 O1D ? B HEC . ? A HEC 200 ? 1_555 91.2 ? 52 OE2 ? A GLU 71 ? A GLU 101 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 5_454 O1D ? B HEC . ? A HEC 200 ? 1_555 39.7 ? 53 OE1 ? A GLU 71 ? A GLU 101 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 5_454 O ? O HOH . ? A HOH 302 ? 1_555 93.5 ? 54 OE2 ? A GLU 71 ? A GLU 101 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 5_454 O ? O HOH . ? A HOH 302 ? 1_555 44.0 ? 55 O1D ? B HEC . ? A HEC 200 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 5_454 O ? O HOH . ? A HOH 302 ? 1_555 6.0 ? 56 OE1 ? A GLU 71 ? A GLU 101 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 5_454 O ? O HOH . ? A HOH 326 ? 1_555 87.6 ? 57 OE2 ? A GLU 71 ? A GLU 101 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 5_454 O ? O HOH . ? A HOH 326 ? 1_555 38.7 ? 58 O1D ? B HEC . ? A HEC 200 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 5_454 O ? O HOH . ? A HOH 326 ? 1_555 6.6 ? 59 O ? O HOH . ? A HOH 302 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 5_454 O ? O HOH . ? A HOH 326 ? 1_555 5.9 ? 60 OE1 ? A GLU 71 ? A GLU 101 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 5_454 O ? O HOH . ? A HOH 333 ? 5_444 92.4 ? 61 OE2 ? A GLU 71 ? A GLU 101 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 5_454 O ? O HOH . ? A HOH 333 ? 5_444 44.6 ? 62 O1D ? B HEC . ? A HEC 200 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 5_454 O ? O HOH . ? A HOH 333 ? 5_444 9.1 ? 63 O ? O HOH . ? A HOH 302 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 5_454 O ? O HOH . ? A HOH 333 ? 5_444 3.7 ? 64 O ? O HOH . ? A HOH 326 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 5_454 O ? O HOH . ? A HOH 333 ? 5_444 6.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-02-14 2 'Structure model' 1 1 2021-10-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_database_proc 5 2 'Structure model' pdbx_struct_conn_angle 6 2 'Structure model' struct_conn 7 2 'Structure model' struct_conn_type # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_database_2.pdbx_DOI' 13 2 'Structure model' '_database_2.pdbx_database_accession' 14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 15 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 16 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 17 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 18 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 19 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 20 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 21 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 22 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 23 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_symmetry' 24 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 25 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 26 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 27 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 28 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 29 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 30 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 31 2 'Structure model' '_pdbx_struct_conn_angle.value' 32 2 'Structure model' '_struct_conn.conn_type_id' 33 2 'Structure model' '_struct_conn.id' 34 2 'Structure model' '_struct_conn.pdbx_dist_value' 35 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 36 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 37 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 38 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 39 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 40 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 41 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 42 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 43 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 44 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 45 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 46 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 47 2 'Structure model' '_struct_conn.ptnr2_symmetry' 48 2 'Structure model' '_struct_conn_type.id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0158 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? autoSHARP ? ? ? . 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 90 ? ? -125.07 -54.66 2 1 LYS A 114 ? ? -36.86 132.82 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 73 ? CD ? A LYS 43 CD 2 1 Y 1 A LYS 73 ? CE ? A LYS 43 CE 3 1 Y 1 A LYS 73 ? NZ ? A LYS 43 NZ 4 1 Y 1 A LYS 115 ? CD ? A LYS 85 CD 5 1 Y 1 A LYS 115 ? CE ? A LYS 85 CE 6 1 Y 1 A LYS 115 ? NZ ? A LYS 85 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 31 ? A SER 1 2 1 Y 1 A ASN 32 ? A ASN 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'HEME C' HEC 3 'ZINC ION' ZN 4 1,2-ETHANEDIOL EDO 5 'ACETATE ION' ACT 6 water HOH #