data_5N2Q # _entry.id 5N2Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.315 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5N2Q WWPDB D_1200003440 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5N2Q _pdbx_database_status.recvd_initial_deposition_date 2017-02-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Russi, S.' 1 ? 'Boer, D.R.' 2 ? 'Coll, M.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Proc. Natl. Acad. Sci. U.S.A.' _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 114 _citation.language ? _citation.page_first E6526 _citation.page_last E6535 _citation.title 'Structural basis of a histidine-DNA nicking/joining mechanism for gene transfer and promiscuous spread of antibiotic resistance.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.1702971114 _citation.pdbx_database_id_PubMed 28739894 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pluta, R.' 1 ? primary 'Boer, D.R.' 2 ? primary 'Lorenzo-Diaz, F.' 3 ? primary 'Russi, S.' 4 ? primary 'Gomez, H.' 5 ? primary 'Fernandez-Lopez, C.' 6 ? primary 'Perez-Luque, R.' 7 ? primary 'Orozco, M.' 8 ? primary 'Espinosa, M.' 9 ? primary 'Coll, M.' 10 ? # _cell.entry_id 5N2Q _cell.length_a 43.576 _cell.length_b 52.853 _cell.length_c 56.035 _cell.angle_alpha 90.00 _cell.angle_beta 95.88 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5N2Q _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Plasmid recombination enzyme' 23590.971 1 ? ? ? ? 2 polymer man 'DNA (26-MER)' 8377.456 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 7 water nat water 18.015 155 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Mobilization protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;SY(MSE)VAR(MSE)QK(MSE)KAGNLGGAFKHNERVFETHSNKDINPSRSHLNYELTDRDRSVSYEKQIKDYVNENKVS NRAIRKDAVLCDEWIITSDKDFFEKLDEEQTRTFFETAKNYFAENYGESNIAYASVHLDESTPH(MSE)H(MSE)GVVPF ENGKLSSKA(MSE)FDREELKHIQEDLPRY(MSE)SDHGFELERGKLNSEAKHKTVAEFKRA(MSE)AD(MSE) ; ;SYMVARMQKMKAGNLGGAFKHNERVFETHSNKDINPSRSHLNYELTDRDRSVSYEKQIKDYVNENKVSNRAIRKDAVLCD EWIITSDKDFFEKLDEEQTRTFFETAKNYFAENYGESNIAYASVHLDESTPHMHMGVVPFENGKLSSKAMFDREELKHIQ EDLPRYMSDHGFELERGKLNSEAKHKTVAEFKRAMADM ; A ? 2 polydeoxyribonucleotide no no ;(DA)(DC)(DT)(DT)(DT)(DA)(DT)(DG)(DA)(DA)(DA)(DA)(DT)(DA)(DA)(DA)(DG)(DT)(DA)(DT) (DA)(DG)(DT)(DG)(DT)(DG)(DT) ; ACTTTATGAAAATAAAGTATAGTGTGT B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 TYR n 1 3 MSE n 1 4 VAL n 1 5 ALA n 1 6 ARG n 1 7 MSE n 1 8 GLN n 1 9 LYS n 1 10 MSE n 1 11 LYS n 1 12 ALA n 1 13 GLY n 1 14 ASN n 1 15 LEU n 1 16 GLY n 1 17 GLY n 1 18 ALA n 1 19 PHE n 1 20 LYS n 1 21 HIS n 1 22 ASN n 1 23 GLU n 1 24 ARG n 1 25 VAL n 1 26 PHE n 1 27 GLU n 1 28 THR n 1 29 HIS n 1 30 SER n 1 31 ASN n 1 32 LYS n 1 33 ASP n 1 34 ILE n 1 35 ASN n 1 36 PRO n 1 37 SER n 1 38 ARG n 1 39 SER n 1 40 HIS n 1 41 LEU n 1 42 ASN n 1 43 TYR n 1 44 GLU n 1 45 LEU n 1 46 THR n 1 47 ASP n 1 48 ARG n 1 49 ASP n 1 50 ARG n 1 51 SER n 1 52 VAL n 1 53 SER n 1 54 TYR n 1 55 GLU n 1 56 LYS n 1 57 GLN n 1 58 ILE n 1 59 LYS n 1 60 ASP n 1 61 TYR n 1 62 VAL n 1 63 ASN n 1 64 GLU n 1 65 ASN n 1 66 LYS n 1 67 VAL n 1 68 SER n 1 69 ASN n 1 70 ARG n 1 71 ALA n 1 72 ILE n 1 73 ARG n 1 74 LYS n 1 75 ASP n 1 76 ALA n 1 77 VAL n 1 78 LEU n 1 79 CYS n 1 80 ASP n 1 81 GLU n 1 82 TRP n 1 83 ILE n 1 84 ILE n 1 85 THR n 1 86 SER n 1 87 ASP n 1 88 LYS n 1 89 ASP n 1 90 PHE n 1 91 PHE n 1 92 GLU n 1 93 LYS n 1 94 LEU n 1 95 ASP n 1 96 GLU n 1 97 GLU n 1 98 GLN n 1 99 THR n 1 100 ARG n 1 101 THR n 1 102 PHE n 1 103 PHE n 1 104 GLU n 1 105 THR n 1 106 ALA n 1 107 LYS n 1 108 ASN n 1 109 TYR n 1 110 PHE n 1 111 ALA n 1 112 GLU n 1 113 ASN n 1 114 TYR n 1 115 GLY n 1 116 GLU n 1 117 SER n 1 118 ASN n 1 119 ILE n 1 120 ALA n 1 121 TYR n 1 122 ALA n 1 123 SER n 1 124 VAL n 1 125 HIS n 1 126 LEU n 1 127 ASP n 1 128 GLU n 1 129 SER n 1 130 THR n 1 131 PRO n 1 132 HIS n 1 133 MSE n 1 134 HIS n 1 135 MSE n 1 136 GLY n 1 137 VAL n 1 138 VAL n 1 139 PRO n 1 140 PHE n 1 141 GLU n 1 142 ASN n 1 143 GLY n 1 144 LYS n 1 145 LEU n 1 146 SER n 1 147 SER n 1 148 LYS n 1 149 ALA n 1 150 MSE n 1 151 PHE n 1 152 ASP n 1 153 ARG n 1 154 GLU n 1 155 GLU n 1 156 LEU n 1 157 LYS n 1 158 HIS n 1 159 ILE n 1 160 GLN n 1 161 GLU n 1 162 ASP n 1 163 LEU n 1 164 PRO n 1 165 ARG n 1 166 TYR n 1 167 MSE n 1 168 SER n 1 169 ASP n 1 170 HIS n 1 171 GLY n 1 172 PHE n 1 173 GLU n 1 174 LEU n 1 175 GLU n 1 176 ARG n 1 177 GLY n 1 178 LYS n 1 179 LEU n 1 180 ASN n 1 181 SER n 1 182 GLU n 1 183 ALA n 1 184 LYS n 1 185 HIS n 1 186 LYS n 1 187 THR n 1 188 VAL n 1 189 ALA n 1 190 GLU n 1 191 PHE n 1 192 LYS n 1 193 ARG n 1 194 ALA n 1 195 MSE n 1 196 ALA n 1 197 ASP n 1 198 MSE n 2 1 DA n 2 2 DC n 2 3 DT n 2 4 DT n 2 5 DT n 2 6 DA n 2 7 DT n 2 8 DG n 2 9 DA n 2 10 DA n 2 11 DA n 2 12 DA n 2 13 DT n 2 14 DA n 2 15 DA n 2 16 DA n 2 17 DG n 2 18 DT n 2 19 DA n 2 20 DT n 2 21 DA n 2 22 DG n 2 23 DT n 2 24 DG n 2 25 DT n 2 26 DG n 2 27 DT n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 198 ? ? 'pre, mob' ? ? ? ? ? ? 'Streptococcus agalactiae' 1311 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 27 ? ? ? ? ? ? ? ? ? 'Plasmid pMV158' 2606 ? ? ? ? ? ? ? ? 'synthetic construct' 32630 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP PRE_STRAG P13925 ? 1 ;SYMVARMQKMKAGNLGGAFKHNERVFETHSNKDINPSRSHLNYELTDRDRSVSYEKQIKDYVNENKVSNRAIRKDAVLCD EWIITSDKDFFEKLDEEQTRTFFETAKNYFAENYGESNIAYASVHLDESTPHMHMGVVPFENGKLSSKAMFDREELKHIQ EDLPRYMSDHGFELERGKLNSEAKHKTVAEFKRAMAD ; 2 2 PDB 5N2Q 5N2Q ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5N2Q A 1 ? 197 ? P13925 2 ? 198 ? 2 198 2 2 5N2Q B 1 ? 27 ? 5N2Q 1 ? 27 ? 1 27 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 5N2Q _struct_ref_seq_dif.mon_id MSE _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 198 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P13925 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 199 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5N2Q _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.96 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 37.17 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'BATCH MODE' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM NaAc, pH 4.6 and 10% PEG 6000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2008-05-01 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8726 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID23-2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.8726 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID23-2 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5N2Q _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.00 _reflns.d_resolution_low 55.73 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 16179 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5N2Q _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 16179 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 55.73 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 98.63 _refine.ls_R_factor_obs 0.16975 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.16624 _refine.ls_R_factor_R_free 0.23843 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 862 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.922 _refine.B_iso_mean 31.718 _refine.aniso_B[1][1] 2.77 _refine.aniso_B[2][2] -0.76 _refine.aniso_B[3][3] -2.35 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -1.65 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.193 _refine.pdbx_overall_ESU_R_Free 0.183 _refine.overall_SU_ML 0.125 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.546 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 1429 _refine_hist.pdbx_number_atoms_nucleic_acid 537 _refine_hist.pdbx_number_atoms_ligand 9 _refine_hist.number_atoms_solvent 155 _refine_hist.number_atoms_total 2130 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 55.73 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.022 0.021 ? 2235 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.135 2.256 ? 3147 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.793 5.000 ? 209 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.513 24.787 ? 94 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.388 15.000 ? 312 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.969 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.130 0.200 ? 332 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.020 ? 1556 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.169 1.500 ? 961 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.096 2.000 ? 1556 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.964 3.000 ? 1274 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 4.267 4.500 ? 1577 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.000 _refine_ls_shell.d_res_low 2.052 _refine_ls_shell.number_reflns_R_work 1025 _refine_ls_shell.R_factor_R_work 0.274 _refine_ls_shell.percent_reflns_obs 85.98 _refine_ls_shell.R_factor_R_free 0.331 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 48 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 5N2Q _struct.title 'MobM Relaxase Domain (MOBV; Mob_Pre) bound to 26nt pMV158 oriT DNA' _struct.pdbx_descriptor 'Plasmid recombination enzyme/DNA Complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5N2Q _struct_keywords.text 'relaxase, nuclease, conjugation, DNA binding protein' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 7 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 14 ? ASN A 22 ? ASN A 15 ASN A 23 1 ? 9 HELX_P HELX_P2 AA2 SER A 53 ? LYS A 66 ? SER A 54 LYS A 67 1 ? 14 HELX_P HELX_P3 AA3 ASP A 87 ? LYS A 93 ? ASP A 88 LYS A 94 1 ? 7 HELX_P HELX_P4 AA4 ASP A 95 ? GLY A 115 ? ASP A 96 GLY A 116 1 ? 21 HELX_P HELX_P5 AA5 SER A 146 ? PHE A 151 ? SER A 147 PHE A 152 1 ? 6 HELX_P HELX_P6 AA6 ASP A 152 ? HIS A 170 ? ASP A 153 HIS A 171 1 ? 19 HELX_P HELX_P7 AA7 THR A 187 ? LYS A 192 ? THR A 188 LYS A 193 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A TYR 2 C A ? ? 1_555 A MSE 3 N A ? A TYR 3 A MSE 4 1_555 ? ? ? ? ? ? ? 1.326 ? covale2 covale both ? A TYR 2 C B ? ? 1_555 A MSE 3 N B ? A TYR 3 A MSE 4 1_555 ? ? ? ? ? ? ? 1.319 ? covale3 covale both ? A MSE 3 C A ? ? 1_555 A VAL 4 N A ? A MSE 4 A VAL 5 1_555 ? ? ? ? ? ? ? 1.338 ? covale4 covale both ? A MSE 3 C B ? ? 1_555 A VAL 4 N B ? A MSE 4 A VAL 5 1_555 ? ? ? ? ? ? ? 1.332 ? covale5 covale both ? A ARG 6 C ? ? ? 1_555 A MSE 7 N ? ? A ARG 7 A MSE 8 1_555 ? ? ? ? ? ? ? 1.332 ? covale6 covale both ? A MSE 7 C ? ? ? 1_555 A GLN 8 N ? ? A MSE 8 A GLN 9 1_555 ? ? ? ? ? ? ? 1.331 ? covale7 covale both ? A LYS 9 C ? ? ? 1_555 A MSE 10 N ? ? A LYS 10 A MSE 11 1_555 ? ? ? ? ? ? ? 1.320 ? covale8 covale both ? A MSE 10 C ? ? ? 1_555 A LYS 11 N ? ? A MSE 11 A LYS 12 1_555 ? ? ? ? ? ? ? 1.332 ? metalc1 metalc ? ? A PHE 91 O ? ? ? 1_555 D MG . MG ? ? A PHE 92 A MG 202 1_555 ? ? ? ? ? ? ? 2.387 ? metalc2 metalc ? ? A LEU 94 O ? ? ? 1_555 D MG . MG ? ? A LEU 95 A MG 202 1_555 ? ? ? ? ? ? ? 2.337 ? covale9 covale both ? A HIS 132 C ? ? ? 1_555 A MSE 133 N ? ? A HIS 133 A MSE 134 1_555 ? ? ? ? ? ? ? 1.333 ? covale10 covale both ? A MSE 133 C ? ? ? 1_555 A HIS 134 N ? ? A MSE 134 A HIS 135 1_555 ? ? ? ? ? ? ? 1.324 ? covale11 covale both ? A HIS 134 C ? ? ? 1_555 A MSE 135 N ? ? A HIS 135 A MSE 136 1_555 ? ? ? ? ? ? ? 1.329 ? covale12 covale both ? A MSE 135 C ? ? ? 1_555 A GLY 136 N ? ? A MSE 136 A GLY 137 1_555 ? ? ? ? ? ? ? 1.313 ? covale13 covale both ? A ALA 149 C ? ? ? 1_555 A MSE 150 N ? ? A ALA 150 A MSE 151 1_555 ? ? ? ? ? ? ? 1.341 ? covale14 covale both ? A MSE 150 C ? ? ? 1_555 A PHE 151 N ? ? A MSE 151 A PHE 152 1_555 ? ? ? ? ? ? ? 1.340 ? covale15 covale both ? A TYR 166 C ? ? ? 1_555 A MSE 167 N ? ? A TYR 167 A MSE 168 1_555 ? ? ? ? ? ? ? 1.323 ? covale16 covale both ? A MSE 167 C ? ? ? 1_555 A SER 168 N ? ? A MSE 168 A SER 169 1_555 ? ? ? ? ? ? ? 1.332 ? metalc3 metalc ? ? B DC 2 OP2 ? ? ? 1_555 F NA . NA ? ? B DC 2 B NA 102 1_555 ? ? ? ? ? ? ? 2.149 ? metalc4 metalc ? ? D MG . MG ? ? ? 1_555 G HOH . O ? ? A MG 202 A HOH 326 1_555 ? ? ? ? ? ? ? 2.132 ? metalc5 metalc ? ? F NA . NA ? ? ? 1_555 H HOH . O ? ? B NA 102 B HOH 210 1_555 ? ? ? ? ? ? ? 3.102 ? metalc6 metalc ? ? F NA . NA ? ? ? 1_555 H HOH . O ? ? B NA 102 B HOH 255 1_555 ? ? ? ? ? ? ? 2.738 ? hydrog1 hydrog ? ? B DA 1 N1 ? ? ? 1_555 B DT 18 N3 ? ? B DA 1 B DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? B DA 1 N6 ? ? ? 1_555 B DT 18 O4 ? ? B DA 1 B DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? B DC 2 N3 ? ? ? 1_555 B DG 17 N1 ? ? B DC 2 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? B DC 2 N4 ? ? ? 1_555 B DG 17 O6 ? ? B DC 2 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? B DC 2 O2 ? ? ? 1_555 B DG 17 N2 ? ? B DC 2 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? B DT 3 N3 ? ? ? 1_555 B DA 16 N1 ? ? B DT 3 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? B DT 3 O4 ? ? ? 1_555 B DA 16 N6 ? ? B DT 3 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? B DT 4 N3 ? ? ? 1_555 B DA 15 N1 ? ? B DT 4 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? B DT 4 O4 ? ? ? 1_555 B DA 15 N6 ? ? B DT 4 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? B DT 5 N3 ? ? ? 1_555 B DA 14 N1 ? ? B DT 5 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? B DT 5 O4 ? ? ? 1_555 B DA 14 N6 ? ? B DT 5 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? B DA 6 N1 ? ? ? 1_555 B DT 13 N3 ? ? B DA 6 B DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? B DA 6 N6 ? ? ? 1_555 B DT 13 O4 ? ? B DA 6 B DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? B DT 7 N3 ? ? ? 1_555 B DA 12 N1 ? ? B DT 7 B DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? B DT 7 O4 ? ? ? 1_555 B DA 12 N6 ? ? B DT 7 B DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 4 ? MSE A 10 ? VAL A 5 MSE A 11 AA1 2 CYS A 79 ? THR A 85 ? CYS A 80 THR A 86 AA1 3 HIS A 132 ? VAL A 137 ? HIS A 133 VAL A 138 AA1 4 ILE A 119 ? HIS A 125 ? ILE A 120 HIS A 126 AA1 5 TYR A 43 ? GLU A 44 ? TYR A 44 GLU A 45 AA2 1 PHE A 140 ? GLU A 141 ? PHE A 141 GLU A 142 AA2 2 LYS A 144 ? LEU A 145 ? LYS A 145 LEU A 146 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ARG A 6 ? N ARG A 7 O ILE A 83 ? O ILE A 84 AA1 2 3 N ASP A 80 ? N ASP A 81 O VAL A 137 ? O VAL A 138 AA1 3 4 O HIS A 134 ? O HIS A 135 N SER A 123 ? N SER A 124 AA1 4 5 O VAL A 124 ? O VAL A 125 N TYR A 43 ? N TYR A 44 AA2 1 2 N GLU A 141 ? N GLU A 142 O LYS A 144 ? O LYS A 145 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 201 ? 2 'binding site for residue CL A 201' AC2 Software A MG 202 ? 3 'binding site for residue MG A 202' AC3 Software B GOL 101 ? 2 'binding site for residue GOL B 101' AC4 Software B NA 102 ? 5 'binding site for residue NA B 102' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 ALA A 12 ? ALA A 13 . ? 1_555 ? 2 AC1 2 GLY A 13 ? GLY A 14 . ? 1_555 ? 3 AC2 3 PHE A 91 ? PHE A 92 . ? 1_555 ? 4 AC2 3 LEU A 94 ? LEU A 95 . ? 1_555 ? 5 AC2 3 HOH G . ? HOH A 326 . ? 1_555 ? 6 AC3 2 PHE A 191 ? PHE A 192 . ? 1_555 ? 7 AC3 2 DG B 24 ? DG B 24 . ? 1_555 ? 8 AC4 5 GLU A 96 ? GLU A 97 . ? 1_556 ? 9 AC4 5 GLU A 97 ? GLU A 98 . ? 1_556 ? 10 AC4 5 DA B 1 ? DA B 1 . ? 1_555 ? 11 AC4 5 DC B 2 ? DC B 2 . ? 1_555 ? 12 AC4 5 HOH H . ? HOH B 255 . ? 1_555 ? # _atom_sites.entry_id 5N2Q _atom_sites.fract_transf_matrix[1][1] 0.022949 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002363 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018920 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017940 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL MG N NA O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 2 2 SER SER A . n A 1 2 TYR 2 3 3 TYR TYR A . n A 1 3 MSE 3 4 4 MSE MSE A . n A 1 4 VAL 4 5 5 VAL VAL A . n A 1 5 ALA 5 6 6 ALA ALA A . n A 1 6 ARG 6 7 7 ARG ARG A . n A 1 7 MSE 7 8 8 MSE MSE A . n A 1 8 GLN 8 9 9 GLN GLN A . n A 1 9 LYS 9 10 10 LYS LYS A . n A 1 10 MSE 10 11 11 MSE MSE A . n A 1 11 LYS 11 12 12 LYS LYS A . n A 1 12 ALA 12 13 13 ALA ALA A . n A 1 13 GLY 13 14 14 GLY GLY A . n A 1 14 ASN 14 15 15 ASN ASN A . n A 1 15 LEU 15 16 16 LEU LEU A . n A 1 16 GLY 16 17 17 GLY GLY A . n A 1 17 GLY 17 18 18 GLY GLY A . n A 1 18 ALA 18 19 19 ALA ALA A . n A 1 19 PHE 19 20 20 PHE PHE A . n A 1 20 LYS 20 21 21 LYS LYS A . n A 1 21 HIS 21 22 22 HIS HIS A . n A 1 22 ASN 22 23 23 ASN ASN A . n A 1 23 GLU 23 24 24 GLU GLU A . n A 1 24 ARG 24 25 ? ? ? A . n A 1 25 VAL 25 26 ? ? ? A . n A 1 26 PHE 26 27 ? ? ? A . n A 1 27 GLU 27 28 ? ? ? A . n A 1 28 THR 28 29 ? ? ? A . n A 1 29 HIS 29 30 ? ? ? A . n A 1 30 SER 30 31 ? ? ? A . n A 1 31 ASN 31 32 ? ? ? A . n A 1 32 LYS 32 33 ? ? ? A . n A 1 33 ASP 33 34 ? ? ? A . n A 1 34 ILE 34 35 ? ? ? A . n A 1 35 ASN 35 36 ? ? ? A . n A 1 36 PRO 36 37 ? ? ? A . n A 1 37 SER 37 38 ? ? ? A . n A 1 38 ARG 38 39 ? ? ? A . n A 1 39 SER 39 40 ? ? ? A . n A 1 40 HIS 40 41 ? ? ? A . n A 1 41 LEU 41 42 ? ? ? A . n A 1 42 ASN 42 43 43 ASN ASN A . n A 1 43 TYR 43 44 44 TYR TYR A . n A 1 44 GLU 44 45 45 GLU GLU A . n A 1 45 LEU 45 46 46 LEU LEU A . n A 1 46 THR 46 47 47 THR THR A . n A 1 47 ASP 47 48 48 ASP ASP A . n A 1 48 ARG 48 49 49 ARG ARG A . n A 1 49 ASP 49 50 50 ASP ASP A . n A 1 50 ARG 50 51 51 ARG ARG A . n A 1 51 SER 51 52 52 SER SER A . n A 1 52 VAL 52 53 53 VAL VAL A . n A 1 53 SER 53 54 54 SER SER A . n A 1 54 TYR 54 55 55 TYR TYR A . n A 1 55 GLU 55 56 56 GLU GLU A . n A 1 56 LYS 56 57 57 LYS LYS A . n A 1 57 GLN 57 58 58 GLN GLN A . n A 1 58 ILE 58 59 59 ILE ILE A . n A 1 59 LYS 59 60 60 LYS LYS A . n A 1 60 ASP 60 61 61 ASP ASP A . n A 1 61 TYR 61 62 62 TYR TYR A . n A 1 62 VAL 62 63 63 VAL VAL A . n A 1 63 ASN 63 64 64 ASN ASN A . n A 1 64 GLU 64 65 65 GLU GLU A . n A 1 65 ASN 65 66 66 ASN ASN A . n A 1 66 LYS 66 67 67 LYS LYS A . n A 1 67 VAL 67 68 68 VAL VAL A . n A 1 68 SER 68 69 69 SER SER A . n A 1 69 ASN 69 70 70 ASN ASN A . n A 1 70 ARG 70 71 71 ARG ARG A . n A 1 71 ALA 71 72 72 ALA ALA A . n A 1 72 ILE 72 73 73 ILE ILE A . n A 1 73 ARG 73 74 74 ARG ARG A . n A 1 74 LYS 74 75 75 LYS LYS A . n A 1 75 ASP 75 76 76 ASP ASP A . n A 1 76 ALA 76 77 77 ALA ALA A . n A 1 77 VAL 77 78 78 VAL VAL A . n A 1 78 LEU 78 79 79 LEU LEU A . n A 1 79 CYS 79 80 80 CYS CYS A . n A 1 80 ASP 80 81 81 ASP ASP A . n A 1 81 GLU 81 82 82 GLU GLU A . n A 1 82 TRP 82 83 83 TRP TRP A . n A 1 83 ILE 83 84 84 ILE ILE A . n A 1 84 ILE 84 85 85 ILE ILE A . n A 1 85 THR 85 86 86 THR THR A . n A 1 86 SER 86 87 87 SER SER A . n A 1 87 ASP 87 88 88 ASP ASP A . n A 1 88 LYS 88 89 89 LYS LYS A . n A 1 89 ASP 89 90 90 ASP ASP A . n A 1 90 PHE 90 91 91 PHE PHE A . n A 1 91 PHE 91 92 92 PHE PHE A . n A 1 92 GLU 92 93 93 GLU GLU A . n A 1 93 LYS 93 94 94 LYS LYS A . n A 1 94 LEU 94 95 95 LEU LEU A . n A 1 95 ASP 95 96 96 ASP ASP A . n A 1 96 GLU 96 97 97 GLU GLU A . n A 1 97 GLU 97 98 98 GLU GLU A . n A 1 98 GLN 98 99 99 GLN GLN A . n A 1 99 THR 99 100 100 THR THR A . n A 1 100 ARG 100 101 101 ARG ARG A . n A 1 101 THR 101 102 102 THR THR A . n A 1 102 PHE 102 103 103 PHE PHE A . n A 1 103 PHE 103 104 104 PHE PHE A . n A 1 104 GLU 104 105 105 GLU GLU A . n A 1 105 THR 105 106 106 THR THR A . n A 1 106 ALA 106 107 107 ALA ALA A . n A 1 107 LYS 107 108 108 LYS LYS A . n A 1 108 ASN 108 109 109 ASN ASN A . n A 1 109 TYR 109 110 110 TYR TYR A . n A 1 110 PHE 110 111 111 PHE PHE A . n A 1 111 ALA 111 112 112 ALA ALA A . n A 1 112 GLU 112 113 113 GLU GLU A . n A 1 113 ASN 113 114 114 ASN ASN A . n A 1 114 TYR 114 115 115 TYR TYR A . n A 1 115 GLY 115 116 116 GLY GLY A . n A 1 116 GLU 116 117 117 GLU GLU A . n A 1 117 SER 117 118 118 SER SER A . n A 1 118 ASN 118 119 119 ASN ASN A . n A 1 119 ILE 119 120 120 ILE ILE A . n A 1 120 ALA 120 121 121 ALA ALA A . n A 1 121 TYR 121 122 122 TYR TYR A . n A 1 122 ALA 122 123 123 ALA ALA A . n A 1 123 SER 123 124 124 SER SER A . n A 1 124 VAL 124 125 125 VAL VAL A . n A 1 125 HIS 125 126 126 HIS HIS A . n A 1 126 LEU 126 127 127 LEU LEU A . n A 1 127 ASP 127 128 128 ASP ASP A . n A 1 128 GLU 128 129 129 GLU GLU A . n A 1 129 SER 129 130 130 SER SER A . n A 1 130 THR 130 131 131 THR THR A . n A 1 131 PRO 131 132 132 PRO PRO A . n A 1 132 HIS 132 133 133 HIS HIS A . n A 1 133 MSE 133 134 134 MSE MSE A . n A 1 134 HIS 134 135 135 HIS HIS A . n A 1 135 MSE 135 136 136 MSE MSE A . n A 1 136 GLY 136 137 137 GLY GLY A . n A 1 137 VAL 137 138 138 VAL VAL A . n A 1 138 VAL 138 139 139 VAL VAL A . n A 1 139 PRO 139 140 140 PRO PRO A . n A 1 140 PHE 140 141 141 PHE PHE A . n A 1 141 GLU 141 142 142 GLU GLU A . n A 1 142 ASN 142 143 143 ASN ASN A . n A 1 143 GLY 143 144 144 GLY GLY A . n A 1 144 LYS 144 145 145 LYS LYS A . n A 1 145 LEU 145 146 146 LEU LEU A . n A 1 146 SER 146 147 147 SER SER A . n A 1 147 SER 147 148 148 SER SER A . n A 1 148 LYS 148 149 149 LYS LYS A . n A 1 149 ALA 149 150 150 ALA ALA A . n A 1 150 MSE 150 151 151 MSE MSE A . n A 1 151 PHE 151 152 152 PHE PHE A . n A 1 152 ASP 152 153 153 ASP ASP A . n A 1 153 ARG 153 154 154 ARG ARG A . n A 1 154 GLU 154 155 155 GLU GLU A . n A 1 155 GLU 155 156 156 GLU GLU A . n A 1 156 LEU 156 157 157 LEU LEU A . n A 1 157 LYS 157 158 158 LYS LYS A . n A 1 158 HIS 158 159 159 HIS HIS A . n A 1 159 ILE 159 160 160 ILE ILE A . n A 1 160 GLN 160 161 161 GLN GLN A . n A 1 161 GLU 161 162 162 GLU GLU A . n A 1 162 ASP 162 163 163 ASP ASP A . n A 1 163 LEU 163 164 164 LEU LEU A . n A 1 164 PRO 164 165 165 PRO PRO A . n A 1 165 ARG 165 166 166 ARG ARG A . n A 1 166 TYR 166 167 167 TYR TYR A . n A 1 167 MSE 167 168 168 MSE MSE A . n A 1 168 SER 168 169 169 SER SER A . n A 1 169 ASP 169 170 170 ASP ASP A . n A 1 170 HIS 170 171 171 HIS HIS A . n A 1 171 GLY 171 172 172 GLY GLY A . n A 1 172 PHE 172 173 173 PHE PHE A . n A 1 173 GLU 173 174 174 GLU GLU A . n A 1 174 LEU 174 175 175 LEU LEU A . n A 1 175 GLU 175 176 176 GLU GLU A . n A 1 176 ARG 176 177 177 ARG ARG A . n A 1 177 GLY 177 178 178 GLY GLY A . n A 1 178 LYS 178 179 179 LYS LYS A . n A 1 179 LEU 179 180 180 LEU LEU A . n A 1 180 ASN 180 181 181 ASN ASN A . n A 1 181 SER 181 182 182 SER SER A . n A 1 182 GLU 182 183 183 GLU GLU A . n A 1 183 ALA 183 184 184 ALA ALA A . n A 1 184 LYS 184 185 185 LYS LYS A . n A 1 185 HIS 185 186 186 HIS HIS A . n A 1 186 LYS 186 187 187 LYS LYS A . n A 1 187 THR 187 188 188 THR THR A . n A 1 188 VAL 188 189 189 VAL VAL A . n A 1 189 ALA 189 190 190 ALA ALA A . n A 1 190 GLU 190 191 191 GLU GLU A . n A 1 191 PHE 191 192 192 PHE PHE A . n A 1 192 LYS 192 193 193 LYS LYS A . n A 1 193 ARG 193 194 ? ? ? A . n A 1 194 ALA 194 195 ? ? ? A . n A 1 195 MSE 195 196 ? ? ? A . n A 1 196 ALA 196 197 ? ? ? A . n A 1 197 ASP 197 198 ? ? ? A . n A 1 198 MSE 198 199 ? ? ? A . n B 2 1 DA 1 1 1 DA DA B . n B 2 2 DC 2 2 2 DC DC B . n B 2 3 DT 3 3 3 DT DT B . n B 2 4 DT 4 4 4 DT DT B . n B 2 5 DT 5 5 5 DT DT B . n B 2 6 DA 6 6 6 DA DA B . n B 2 7 DT 7 7 7 DT DT B . n B 2 8 DG 8 8 8 DG DG B . n B 2 9 DA 9 9 9 DA DA B . n B 2 10 DA 10 10 10 DA DA B . n B 2 11 DA 11 11 11 DA DA B . n B 2 12 DA 12 12 12 DA DA B . n B 2 13 DT 13 13 13 DT DT B . n B 2 14 DA 14 14 14 DA DA B . n B 2 15 DA 15 15 15 DA DA B . n B 2 16 DA 16 16 16 DA DA B . n B 2 17 DG 17 17 17 DG DG B . n B 2 18 DT 18 18 18 DT DT B . n B 2 19 DA 19 19 19 DA DA B . n B 2 20 DT 20 20 20 DT DT B . n B 2 21 DA 21 21 21 DA DA B . n B 2 22 DG 22 22 22 DG DG B . n B 2 23 DT 23 23 23 DT DT B . n B 2 24 DG 24 24 24 DG DG B . n B 2 25 DT 25 25 25 DT DT B . n B 2 26 DG 26 26 26 DG DG B . n B 2 27 DT 27 27 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CL 1 201 1 CL CL A . D 4 MG 1 202 1 MG MG A . E 5 GOL 1 101 1 GOL GOL B . F 6 NA 1 102 1 NA NA B . G 7 HOH 1 301 90 HOH HOH A . G 7 HOH 2 302 157 HOH HOH A . G 7 HOH 3 303 59 HOH HOH A . G 7 HOH 4 304 124 HOH HOH A . G 7 HOH 5 305 100 HOH HOH A . G 7 HOH 6 306 88 HOH HOH A . G 7 HOH 7 307 91 HOH HOH A . G 7 HOH 8 308 180 HOH HOH A . G 7 HOH 9 309 68 HOH HOH A . G 7 HOH 10 310 161 HOH HOH A . G 7 HOH 11 311 117 HOH HOH A . G 7 HOH 12 312 181 HOH HOH A . G 7 HOH 13 313 126 HOH HOH A . G 7 HOH 14 314 25 HOH HOH A . G 7 HOH 15 315 136 HOH HOH A . G 7 HOH 16 316 12 HOH HOH A . G 7 HOH 17 317 192 HOH HOH A . G 7 HOH 18 318 170 HOH HOH A . G 7 HOH 19 319 51 HOH HOH A . G 7 HOH 20 320 118 HOH HOH A . G 7 HOH 21 321 114 HOH HOH A . G 7 HOH 22 322 101 HOH HOH A . G 7 HOH 23 323 8 HOH HOH A . G 7 HOH 24 324 104 HOH HOH A . G 7 HOH 25 325 190 HOH HOH A . G 7 HOH 26 326 175 HOH HOH A . G 7 HOH 27 327 27 HOH HOH A . G 7 HOH 28 328 33 HOH HOH A . G 7 HOH 29 329 40 HOH HOH A . G 7 HOH 30 330 35 HOH HOH A . G 7 HOH 31 331 166 HOH HOH A . G 7 HOH 32 332 121 HOH HOH A . G 7 HOH 33 333 7 HOH HOH A . G 7 HOH 34 334 52 HOH HOH A . G 7 HOH 35 335 10 HOH HOH A . G 7 HOH 36 336 182 HOH HOH A . G 7 HOH 37 337 73 HOH HOH A . G 7 HOH 38 338 151 HOH HOH A . G 7 HOH 39 339 54 HOH HOH A . G 7 HOH 40 340 103 HOH HOH A . G 7 HOH 41 341 176 HOH HOH A . G 7 HOH 42 342 164 HOH HOH A . G 7 HOH 43 343 58 HOH HOH A . G 7 HOH 44 344 193 HOH HOH A . G 7 HOH 45 345 16 HOH HOH A . G 7 HOH 46 346 188 HOH HOH A . G 7 HOH 47 347 70 HOH HOH A . G 7 HOH 48 348 53 HOH HOH A . G 7 HOH 49 349 26 HOH HOH A . G 7 HOH 50 350 57 HOH HOH A . G 7 HOH 51 351 31 HOH HOH A . G 7 HOH 52 352 13 HOH HOH A . G 7 HOH 53 353 3 HOH HOH A . G 7 HOH 54 354 6 HOH HOH A . G 7 HOH 55 355 196 HOH HOH A . G 7 HOH 56 356 150 HOH HOH A . G 7 HOH 57 357 123 HOH HOH A . G 7 HOH 58 358 152 HOH HOH A . G 7 HOH 59 359 76 HOH HOH A . G 7 HOH 60 360 102 HOH HOH A . G 7 HOH 61 361 195 HOH HOH A . G 7 HOH 62 362 78 HOH HOH A . G 7 HOH 63 363 14 HOH HOH A . G 7 HOH 64 364 168 HOH HOH A . G 7 HOH 65 365 130 HOH HOH A . G 7 HOH 66 366 120 HOH HOH A . G 7 HOH 67 367 113 HOH HOH A . G 7 HOH 68 368 127 HOH HOH A . G 7 HOH 69 369 171 HOH HOH A . G 7 HOH 70 370 106 HOH HOH A . G 7 HOH 71 371 65 HOH HOH A . G 7 HOH 72 372 62 HOH HOH A . G 7 HOH 73 373 147 HOH HOH A . G 7 HOH 74 374 128 HOH HOH A . G 7 HOH 75 375 110 HOH HOH A . G 7 HOH 76 376 111 HOH HOH A . G 7 HOH 77 377 169 HOH HOH A . G 7 HOH 78 378 160 HOH HOH A . G 7 HOH 79 379 41 HOH HOH A . G 7 HOH 80 380 167 HOH HOH A . G 7 HOH 81 381 105 HOH HOH A . G 7 HOH 82 382 109 HOH HOH A . G 7 HOH 83 383 95 HOH HOH A . G 7 HOH 84 384 30 HOH HOH A . G 7 HOH 85 385 179 HOH HOH A . G 7 HOH 86 386 63 HOH HOH A . G 7 HOH 87 387 191 HOH HOH A . G 7 HOH 88 388 187 HOH HOH A . G 7 HOH 89 389 99 HOH HOH A . G 7 HOH 90 390 137 HOH HOH A . G 7 HOH 91 391 116 HOH HOH A . G 7 HOH 92 392 19 HOH HOH A . G 7 HOH 93 393 148 HOH HOH A . G 7 HOH 94 394 69 HOH HOH A . G 7 HOH 95 395 153 HOH HOH A . G 7 HOH 96 396 94 HOH HOH A . H 7 HOH 1 201 140 HOH HOH B . H 7 HOH 2 202 156 HOH HOH B . H 7 HOH 3 203 183 HOH HOH B . H 7 HOH 4 204 2 HOH HOH B . H 7 HOH 5 205 21 HOH HOH B . H 7 HOH 6 206 112 HOH HOH B . H 7 HOH 7 207 66 HOH HOH B . H 7 HOH 8 208 119 HOH HOH B . H 7 HOH 9 209 29 HOH HOH B . H 7 HOH 10 210 133 HOH HOH B . H 7 HOH 11 211 165 HOH HOH B . H 7 HOH 12 212 141 HOH HOH B . H 7 HOH 13 213 72 HOH HOH B . H 7 HOH 14 214 172 HOH HOH B . H 7 HOH 15 215 138 HOH HOH B . H 7 HOH 16 216 145 HOH HOH B . H 7 HOH 17 217 115 HOH HOH B . H 7 HOH 18 218 32 HOH HOH B . H 7 HOH 19 219 146 HOH HOH B . H 7 HOH 20 220 82 HOH HOH B . H 7 HOH 21 221 43 HOH HOH B . H 7 HOH 22 222 45 HOH HOH B . H 7 HOH 23 223 55 HOH HOH B . H 7 HOH 24 224 184 HOH HOH B . H 7 HOH 25 225 15 HOH HOH B . H 7 HOH 26 226 9 HOH HOH B . H 7 HOH 27 227 71 HOH HOH B . H 7 HOH 28 228 39 HOH HOH B . H 7 HOH 29 229 34 HOH HOH B . H 7 HOH 30 230 4 HOH HOH B . H 7 HOH 31 231 125 HOH HOH B . H 7 HOH 32 232 56 HOH HOH B . H 7 HOH 33 233 155 HOH HOH B . H 7 HOH 34 234 174 HOH HOH B . H 7 HOH 35 235 67 HOH HOH B . H 7 HOH 36 236 24 HOH HOH B . H 7 HOH 37 237 83 HOH HOH B . H 7 HOH 38 238 47 HOH HOH B . H 7 HOH 39 239 5 HOH HOH B . H 7 HOH 40 240 189 HOH HOH B . H 7 HOH 41 241 122 HOH HOH B . H 7 HOH 42 242 144 HOH HOH B . H 7 HOH 43 243 143 HOH HOH B . H 7 HOH 44 244 11 HOH HOH B . H 7 HOH 45 245 18 HOH HOH B . H 7 HOH 46 246 142 HOH HOH B . H 7 HOH 47 247 46 HOH HOH B . H 7 HOH 48 248 186 HOH HOH B . H 7 HOH 49 249 154 HOH HOH B . H 7 HOH 50 250 131 HOH HOH B . H 7 HOH 51 251 93 HOH HOH B . H 7 HOH 52 252 108 HOH HOH B . H 7 HOH 53 253 139 HOH HOH B . H 7 HOH 54 254 159 HOH HOH B . H 7 HOH 55 255 185 HOH HOH B . H 7 HOH 56 256 107 HOH HOH B . H 7 HOH 57 257 194 HOH HOH B . H 7 HOH 58 258 149 HOH HOH B . H 7 HOH 59 259 158 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 3 A MSE 4 ? MET 'modified residue' 2 A MSE 7 A MSE 8 ? MET 'modified residue' 3 A MSE 10 A MSE 11 ? MET 'modified residue' 4 A MSE 133 A MSE 134 ? MET 'modified residue' 5 A MSE 135 A MSE 136 ? MET 'modified residue' 6 A MSE 150 A MSE 151 ? MET 'modified residue' 7 A MSE 167 A MSE 168 ? MET 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3920 ? 1 MORE -35 ? 1 'SSA (A^2)' 13310 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A PHE 91 ? A PHE 92 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? A LEU 94 ? A LEU 95 ? 1_555 83.3 ? 2 O ? A PHE 91 ? A PHE 92 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? G HOH . ? A HOH 326 ? 1_555 83.1 ? 3 O ? A LEU 94 ? A LEU 95 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? G HOH . ? A HOH 326 ? 1_555 107.1 ? 4 OP2 ? B DC 2 ? B DC 2 ? 1_555 NA ? F NA . ? B NA 102 ? 1_555 O ? H HOH . ? B HOH 210 ? 1_555 116.3 ? 5 OP2 ? B DC 2 ? B DC 2 ? 1_555 NA ? F NA . ? B NA 102 ? 1_555 O ? H HOH . ? B HOH 255 ? 1_555 109.6 ? 6 O ? H HOH . ? B HOH 210 ? 1_555 NA ? F NA . ? B NA 102 ? 1_555 O ? H HOH . ? B HOH 255 ? 1_555 113.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-04-12 2 'Structure model' 1 1 2017-09-27 3 'Structure model' 1 2 2019-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' reflns_shell # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.5.0102 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C4 B DC 2 ? ? C5 B DC 2 ? ? 1.476 1.425 0.051 0.008 N 2 1 C6 B DT 3 ? ? N1 B DT 3 ? ? 1.432 1.378 0.054 0.007 N 3 1 C5 B DT 3 ? ? C7 B DT 3 ? ? 1.533 1.496 0.037 0.006 N 4 1 "O3'" B DT 4 ? ? "C3'" B DT 4 ? ? 1.341 1.419 -0.078 0.006 N 5 1 C5 B DT 4 ? ? C7 B DT 4 ? ? 1.533 1.496 0.037 0.006 N 6 1 C5 B DT 5 ? ? C7 B DT 5 ? ? 1.537 1.496 0.041 0.006 N 7 1 C5 B DA 12 ? ? N7 B DA 12 ? ? 1.426 1.388 0.038 0.006 N 8 1 N7 B DG 17 ? ? C8 B DG 17 ? ? 1.353 1.305 0.048 0.006 N 9 1 N9 B DA 21 ? ? C4 B DA 21 ? ? 1.428 1.374 0.054 0.006 N 10 1 C6 B DA 21 ? ? N6 B DA 21 ? ? 1.383 1.335 0.048 0.008 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 101 ? ? CZ A ARG 101 ? ? NH1 A ARG 101 ? ? 117.09 120.30 -3.21 0.50 N 2 1 C6 B DA 1 ? ? N1 B DA 1 ? ? C2 B DA 1 ? ? 122.23 118.60 3.63 0.60 N 3 1 N1 B DA 1 ? ? C2 B DA 1 ? ? N3 B DA 1 ? ? 124.63 129.30 -4.67 0.50 N 4 1 "C1'" B DC 2 ? ? "O4'" B DC 2 ? ? "C4'" B DC 2 ? ? 103.68 110.10 -6.42 1.00 N 5 1 "O4'" B DC 2 ? ? "C1'" B DC 2 ? ? N1 B DC 2 ? ? 112.52 108.30 4.22 0.30 N 6 1 N1 B DC 2 ? ? C2 B DC 2 ? ? O2 B DC 2 ? ? 123.66 118.90 4.76 0.60 N 7 1 N3 B DC 2 ? ? C4 B DC 2 ? ? N4 B DC 2 ? ? 113.11 118.00 -4.89 0.70 N 8 1 C5 B DC 2 ? ? C4 B DC 2 ? ? N4 B DC 2 ? ? 125.39 120.20 5.19 0.70 N 9 1 OP1 B DT 3 ? ? P B DT 3 ? ? OP2 B DT 3 ? ? 130.96 119.60 11.36 1.50 N 10 1 C4 B DT 4 ? ? C5 B DT 4 ? ? C7 B DT 4 ? ? 122.60 119.00 3.60 0.60 N 11 1 "C4'" B DT 5 ? ? "C3'" B DT 5 ? ? "C2'" B DT 5 ? ? 108.69 103.10 5.59 0.90 N 12 1 C4 B DT 5 ? ? C5 B DT 5 ? ? C7 B DT 5 ? ? 123.93 119.00 4.93 0.60 N 13 1 N1 B DA 6 ? ? C2 B DA 6 ? ? N3 B DA 6 ? ? 125.96 129.30 -3.34 0.50 N 14 1 N1 B DA 6 ? ? C6 B DA 6 ? ? N6 B DA 6 ? ? 122.59 118.60 3.99 0.60 N 15 1 "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 111.29 108.30 2.99 0.30 N 16 1 "O4'" B DG 8 ? ? "C1'" B DG 8 ? ? N9 B DG 8 ? ? 102.19 108.00 -5.81 0.70 N 17 1 "O5'" B DA 9 ? ? P B DA 9 ? ? OP1 B DA 9 ? ? 96.44 105.70 -9.26 0.90 N 18 1 "O5'" B DA 9 ? ? P B DA 9 ? ? OP2 B DA 9 ? ? 120.52 110.70 9.82 1.20 N 19 1 N1 B DA 9 ? ? C2 B DA 9 ? ? N3 B DA 9 ? ? 125.91 129.30 -3.39 0.50 N 20 1 "O4'" B DA 10 ? ? "C1'" B DA 10 ? ? N9 B DA 10 ? ? 112.25 108.30 3.95 0.30 N 21 1 C5 B DA 10 ? ? N7 B DA 10 ? ? C8 B DA 10 ? ? 100.68 103.90 -3.22 0.50 N 22 1 "C3'" B DA 11 ? ? "C2'" B DA 11 ? ? "C1'" B DA 11 ? ? 97.51 102.40 -4.89 0.80 N 23 1 "O4'" B DA 11 ? ? "C1'" B DA 11 ? ? N9 B DA 11 ? ? 111.14 108.30 2.84 0.30 N 24 1 OP1 B DA 15 ? ? P B DA 15 ? ? OP2 B DA 15 ? ? 129.25 119.60 9.65 1.50 N 25 1 "O5'" B DA 15 ? ? P B DA 15 ? ? OP1 B DA 15 ? ? 99.71 105.70 -5.99 0.90 N 26 1 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 103.22 108.00 -4.78 0.70 N 27 1 "O4'" B DA 16 ? ? "C1'" B DA 16 ? ? N9 B DA 16 ? ? 115.30 108.30 7.00 0.30 N 28 1 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 102.95 108.00 -5.05 0.70 N 29 1 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? N1 B DT 18 ? ? 110.62 108.30 2.32 0.30 N 30 1 N3 B DT 18 ? ? C4 B DT 18 ? ? O4 B DT 18 ? ? 124.17 119.90 4.27 0.60 N 31 1 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 99.96 105.90 -5.94 0.80 N 32 1 N1 B DA 21 ? ? C6 B DA 21 ? ? N6 B DA 21 ? ? 122.46 118.60 3.86 0.60 N 33 1 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 112.76 108.30 4.46 0.30 N 34 1 C5 B DG 22 ? ? C6 B DG 22 ? ? N1 B DG 22 ? ? 115.57 111.50 4.07 0.50 N 35 1 C5 B DG 22 ? ? C6 B DG 22 ? ? O6 B DG 22 ? ? 124.77 128.60 -3.83 0.60 N 36 1 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 102.97 108.00 -5.03 0.70 N 37 1 N3 B DG 24 ? ? C4 B DG 24 ? ? C5 B DG 24 ? ? 125.37 128.60 -3.23 0.50 N 38 1 "O4'" B DG 26 ? ? "C1'" B DG 26 ? ? N9 B DG 26 ? ? 103.73 108.00 -4.27 0.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 23 ? A -86.07 35.86 2 1 ASN A 23 ? B -97.52 34.17 3 1 THR A 86 ? ? -167.58 -162.96 4 1 SER A 87 ? ? -162.73 -157.89 5 1 SER A 87 ? ? -162.73 -159.24 6 1 ALA A 123 ? ? -150.02 82.44 7 1 LEU A 127 ? A -140.87 59.72 8 1 ASP A 128 ? A -141.39 -121.44 9 1 ASP A 128 ? B -131.69 -51.38 10 1 GLU A 129 ? B -159.64 -21.27 11 1 SER A 182 ? ? -37.96 134.25 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 25 ? A ARG 24 2 1 Y 1 A VAL 26 ? A VAL 25 3 1 Y 1 A PHE 27 ? A PHE 26 4 1 Y 1 A GLU 28 ? A GLU 27 5 1 Y 1 A THR 29 ? A THR 28 6 1 Y 1 A HIS 30 ? A HIS 29 7 1 Y 1 A SER 31 ? A SER 30 8 1 Y 1 A ASN 32 ? A ASN 31 9 1 Y 1 A LYS 33 ? A LYS 32 10 1 Y 1 A ASP 34 ? A ASP 33 11 1 Y 1 A ILE 35 ? A ILE 34 12 1 Y 1 A ASN 36 ? A ASN 35 13 1 Y 1 A PRO 37 ? A PRO 36 14 1 Y 1 A SER 38 ? A SER 37 15 1 Y 1 A ARG 39 ? A ARG 38 16 1 Y 1 A SER 40 ? A SER 39 17 1 Y 1 A HIS 41 ? A HIS 40 18 1 Y 1 A LEU 42 ? A LEU 41 19 1 Y 1 A ARG 194 ? A ARG 193 20 1 Y 1 A ALA 195 ? A ALA 194 21 1 Y 1 A MSE 196 ? A MSE 195 22 1 Y 1 A ALA 197 ? A ALA 196 23 1 Y 1 A ASP 198 ? A ASP 197 24 1 Y 1 A MSE 199 ? A MSE 198 25 1 Y 1 B DT 27 ? B DT 27 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5N2Q 'double helix' 5N2Q 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DA 1 1_555 B DT 18 1_555 0.201 -0.088 0.129 10.312 -2.335 -0.158 1 B_DA1:DT18_B B 1 ? B 18 ? 20 1 1 B DC 2 1_555 B DG 17 1_555 0.401 -0.061 0.162 12.779 -20.294 1.416 2 B_DC2:DG17_B B 2 ? B 17 ? 19 1 1 B DT 3 1_555 B DA 16 1_555 -0.265 -0.083 0.224 -15.695 -16.247 0.288 3 B_DT3:DA16_B B 3 ? B 16 ? 20 1 1 B DT 4 1_555 B DA 15 1_555 0.013 -0.103 -0.306 -10.947 -19.591 -1.386 4 B_DT4:DA15_B B 4 ? B 15 ? 20 1 1 B DT 5 1_555 B DA 14 1_555 0.166 -0.137 -0.005 -13.263 -15.651 4.887 5 B_DT5:DA14_B B 5 ? B 14 ? 20 1 1 B DA 6 1_555 B DT 13 1_555 -0.145 -0.120 -0.209 -2.842 -6.585 1.580 6 B_DA6:DT13_B B 6 ? B 13 ? 20 1 1 B DT 7 1_555 B DA 12 1_555 -0.227 -0.104 -0.063 8.276 -5.315 -0.456 7 B_DT7:DA12_B B 7 ? B 12 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DA 1 1_555 B DT 18 1_555 B DC 2 1_555 B DG 17 1_555 0.465 -0.964 3.292 -2.513 5.439 29.871 -2.895 -1.375 3.024 10.419 4.814 30.453 1 BB_DA1DC2:DG17DT18_BB B 1 ? B 18 ? B 2 ? B 17 ? 1 B DC 2 1_555 B DG 17 1_555 B DT 3 1_555 B DA 16 1_555 0.280 -0.899 3.721 6.045 4.901 40.914 -1.850 0.328 3.598 6.935 -8.555 41.616 2 BB_DC2DT3:DA16DG17_BB B 2 ? B 17 ? B 3 ? B 16 ? 1 B DT 3 1_555 B DA 16 1_555 B DT 4 1_555 B DA 15 1_555 -0.736 -0.007 3.053 1.960 -3.676 36.515 0.455 1.416 2.998 -5.844 -3.116 36.744 3 BB_DT3DT4:DA15DA16_BB B 3 ? B 16 ? B 4 ? B 15 ? 1 B DT 4 1_555 B DA 15 1_555 B DT 5 1_555 B DA 14 1_555 0.593 0.327 3.286 -1.150 4.332 36.764 -0.071 -1.089 3.282 6.838 1.815 37.027 4 BB_DT4DT5:DA14DA15_BB B 4 ? B 15 ? B 5 ? B 14 ? 1 B DT 5 1_555 B DA 14 1_555 B DA 6 1_555 B DT 13 1_555 -0.138 0.948 3.201 -0.420 7.202 31.851 0.423 0.173 3.331 12.918 0.753 32.637 5 BB_DT5DA6:DT13DA14_BB B 5 ? B 14 ? B 6 ? B 13 ? 1 B DA 6 1_555 B DT 13 1_555 B DT 7 1_555 B DA 12 1_555 0.542 -0.271 3.031 -0.717 1.564 27.090 -0.941 -1.321 2.996 3.336 1.528 27.143 6 BB_DA6DT7:DA12DT13_BB B 6 ? B 13 ? B 7 ? B 12 ? # _pdbx_audit_support.funding_organization ? _pdbx_audit_support.country Spain _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CHLORIDE ION' CL 4 'MAGNESIUM ION' MG 5 GLYCEROL GOL 6 'SODIUM ION' NA 7 water HOH #