data_5N35 # _entry.id 5N35 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5N35 WWPDB D_1200001999 # _pdbx_database_related.content_type unspecified _pdbx_database_related.db_id 5N41 _pdbx_database_related.db_name PDB _pdbx_database_related.details 'native structure at 1.35 Ang' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5N35 _pdbx_database_status.recvd_initial_deposition_date 2017-02-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.identifier_ORCID _audit_author.name _audit_author.pdbx_ordinal ? 'Yan, J.' 1 ? 'Beattie, T.R.' 2 ? 'Rojas, A.L.' 3 ? 'Schermerhorn, K.' 4 ? 'Gristwood, T.' 5 ? 'Trinidad, J.C.' 6 ? 'Albers, S.V.' 7 ? 'Roversi, P.' 8 ? 'Gardner, A.F.' 9 ? 'Abrescia, N.G.A.' 10 ? 'Bell, S.D.' 11 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 8 _citation.language ? _citation.page_first 15075 _citation.page_last 15075 _citation.title 'Identification and characterization of a heterotrimeric archaeal DNA polymerase holoenzyme.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/ncomms15075 _citation.pdbx_database_id_PubMed 28462924 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Yan, J.' 1 primary 'Beattie, T.R.' 2 primary 'Rojas, A.L.' 3 primary 'Schermerhorn, K.' 4 primary 'Gristwood, T.' 5 primary 'Trinidad, J.C.' 6 primary 'Albers, S.V.' 7 primary 'Roversi, P.' 8 primary 'Gardner, A.F.' 9 primary 'Abrescia, N.G.A.' 10 primary 'Bell, S.D.' 11 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 5N35 _cell.details ? _cell.formula_units_Z ? _cell.length_a 62.150 _cell.length_a_esd ? _cell.length_b 62.150 _cell.length_b_esd ? _cell.length_c 35.680 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5N35 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PolB1 Binding Protein 2 (PBP2)' 8688.045 1 ? ? ? ? 2 non-polymer syn 'GADOLINIUM ATOM' 157.250 2 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 3 ? ? ? ? 4 non-polymer syn 'NITRATE ION' 62.005 1 ? ? ? ? 5 water nat water 18.015 30 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MSVNQKEIEIAIEYFKNYISVGEIVATMDLKARGISNPQAVISKLIEMGIIEKGEGCYNLVRKSTDKKLEHHHHHH _entity_poly.pdbx_seq_one_letter_code_can MSVNQKEIEIAIEYFKNYISVGEIVATMDLKARGISNPQAVISKLIEMGIIEKGEGCYNLVRKSTDKKLEHHHHHH _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 VAL n 1 4 ASN n 1 5 GLN n 1 6 LYS n 1 7 GLU n 1 8 ILE n 1 9 GLU n 1 10 ILE n 1 11 ALA n 1 12 ILE n 1 13 GLU n 1 14 TYR n 1 15 PHE n 1 16 LYS n 1 17 ASN n 1 18 TYR n 1 19 ILE n 1 20 SER n 1 21 VAL n 1 22 GLY n 1 23 GLU n 1 24 ILE n 1 25 VAL n 1 26 ALA n 1 27 THR n 1 28 MET n 1 29 ASP n 1 30 LEU n 1 31 LYS n 1 32 ALA n 1 33 ARG n 1 34 GLY n 1 35 ILE n 1 36 SER n 1 37 ASN n 1 38 PRO n 1 39 GLN n 1 40 ALA n 1 41 VAL n 1 42 ILE n 1 43 SER n 1 44 LYS n 1 45 LEU n 1 46 ILE n 1 47 GLU n 1 48 MET n 1 49 GLY n 1 50 ILE n 1 51 ILE n 1 52 GLU n 1 53 LYS n 1 54 GLY n 1 55 GLU n 1 56 GLY n 1 57 CYS n 1 58 TYR n 1 59 ASN n 1 60 LEU n 1 61 VAL n 1 62 ARG n 1 63 LYS n 1 64 SER n 1 65 THR n 1 66 ASP n 1 67 LYS n 1 68 LYS n 1 69 LEU n 1 70 GLU n 1 71 HIS n 1 72 HIS n 1 73 HIS n 1 74 HIS n 1 75 HIS n 1 76 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 76 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'SSOP1_0579, SULA_1676, SULB_1677, SULC_1675' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sulfolobus solfataricus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant Rosetta _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A0E3GTJ4_SULSF _struct_ref.pdbx_db_accession A0A0E3GTJ4 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MSVNQKEIEIAIEYFKNYISVGEIVATMDLKARGISNPQAVISKLIEMGIIEKGEGCYNLVRKSTDKK _struct_ref.pdbx_align_begin 9 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5N35 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 68 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A0E3GTJ4 _struct_ref_seq.db_align_beg 9 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 76 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 9 _struct_ref_seq.pdbx_auth_seq_align_end 76 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5N35 LEU A 69 ? UNP A0A0E3GTJ4 ? ? 'expression tag' 77 1 1 5N35 GLU A 70 ? UNP A0A0E3GTJ4 ? ? 'expression tag' 78 2 1 5N35 HIS A 71 ? UNP A0A0E3GTJ4 ? ? 'expression tag' 79 3 1 5N35 HIS A 72 ? UNP A0A0E3GTJ4 ? ? 'expression tag' 80 4 1 5N35 HIS A 73 ? UNP A0A0E3GTJ4 ? ? 'expression tag' 81 5 1 5N35 HIS A 74 ? UNP A0A0E3GTJ4 ? ? 'expression tag' 82 6 1 5N35 HIS A 75 ? UNP A0A0E3GTJ4 ? ? 'expression tag' 83 7 1 5N35 HIS A 76 ? UNP A0A0E3GTJ4 ? ? 'expression tag' 84 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GD non-polymer . 'GADOLINIUM ATOM' ? Gd 157.250 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NO3 non-polymer . 'NITRATE ION' ? 'N O3 -1' 62.005 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5N35 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.29 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.28 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation 'FOR ANALYSIS, PLEASE, USE THE NATIVE HIGH-RESOLUTION 1.35 Ang STRUCTURE: PDB 5N41' _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 294.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;Protein: 42.7 mg/ml in 20 mM Hepes pH 7.5, 0.3 M NaCl, 1mM MgCl2 and 1mM b-ME. Crystallization buffer: 0.2 M NaNO3, 20% PEG 3350 ; _exptl_crystal_grow.pdbx_pH_range ? # loop_ _diffrn.ambient_environment _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.ambient_temp_esd _diffrn.crystal_id _diffrn.crystal_support _diffrn.crystal_treatment _diffrn.details _diffrn.id _diffrn.ambient_pressure _diffrn.ambient_pressure_esd _diffrn.ambient_pressure_gt _diffrn.ambient_pressure_lt _diffrn.ambient_temp_gt _diffrn.ambient_temp_lt ? 100 ? ? 1 ? ? ? 1 ? ? ? ? ? ? ? 100 ? ? 1 ? ? ? 2 ? ? ? ? ? ? ? 100 ? ? 1 ? ? ? 3 ? ? ? ? ? ? # loop_ _diffrn_detector.details _diffrn_detector.detector _diffrn_detector.diffrn_id _diffrn_detector.type _diffrn_detector.area_resol_mean _diffrn_detector.dtime _diffrn_detector.pdbx_frames_total _diffrn_detector.pdbx_collection_time_total _diffrn_detector.pdbx_collection_date ? PIXEL 1 'DECTRIS PILATUS 6M' ? ? ? ? 2012-11-22 ? PIXEL 2 'DECTRIS PILATUS 6M' ? ? ? ? 2012-11-22 ? PIXEL 3 'DECTRIS PILATUS 6M' ? ? ? ? 2016-11-22 # loop_ _diffrn_radiation.collimation _diffrn_radiation.diffrn_id _diffrn_radiation.filter_edge _diffrn_radiation.inhomogeneity _diffrn_radiation.monochromator _diffrn_radiation.polarisn_norm _diffrn_radiation.polarisn_ratio _diffrn_radiation.probe _diffrn_radiation.type _diffrn_radiation.xray_symbol _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_wavelength_list _diffrn_radiation.pdbx_wavelength _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_analyzer _diffrn_radiation.pdbx_scattering_type ? 1 ? ? ? ? ? ? ? ? 1 M ? ? MAD ? x-ray ? 2 ? ? ? ? ? ? ? ? 2 M ? ? MAD ? x-ray ? 3 ? ? ? ? ? ? ? ? 3 M ? ? MAD ? x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.71076 1.0 2 1.71145 1.0 3 1.70371 1.0 # loop_ _diffrn_source.current _diffrn_source.details _diffrn_source.diffrn_id _diffrn_source.power _diffrn_source.size _diffrn_source.source _diffrn_source.target _diffrn_source.type _diffrn_source.voltage _diffrn_source.take-off_angle _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_synchrotron_site ? ? 1 ? ? SYNCHROTRON ? 'ESRF BEAMLINE ID29' ? ? 1.71076 ? ID29 ESRF ? ? 2 ? ? SYNCHROTRON ? 'ESRF BEAMLINE ID29' ? ? 1.71145 ? ID29 ESRF ? ? 3 ? ? SYNCHROTRON ? 'ESRF BEAMLINE ID29' ? ? 1.70371 ? ID29 ESRF # _reflns.B_iso_Wilson_estimate 30.9 _reflns.entry_id 5N35 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.2 _reflns.d_resolution_low 31.1 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 3963 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 17 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 31.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.2 _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.3 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 90.7 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.07 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 8.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -1.6342 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] -1.6342 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 3.2683 _refine.B_iso_max ? _refine.B_iso_mean 37.15 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.9153 _refine.correlation_coeff_Fo_to_Fc_free 0.8809 _refine.details 'The refinement was carried out with the data from remote 1.' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5N35 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.24 _refine.ls_d_res_low 31.08 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 3740 _refine.ls_number_reflns_R_free 171 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 93.62 _refine.ls_percent_reflns_R_free 4.57 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2294 _refine.ls_R_factor_R_free 0.2748 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2271 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.235 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.240 _refine.pdbx_overall_SU_R_Blow_DPI 0.317 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 3 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 0.304 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 5N35 _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.401 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 468 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 24 _refine_hist.number_atoms_solvent 30 _refine_hist.number_atoms_total 522 _refine_hist.d_res_high 2.24 _refine_hist.d_res_low 31.08 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 ? 521 ? t_bond_d 2.00 HARMONIC 'X-RAY DIFFRACTION' ? 1.29 ? 710 ? t_angle_deg 2.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 195 ? t_dihedral_angle_d 2.00 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? ? ? t_incorr_chiral_ct ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_pseud_angle ? ? 'X-RAY DIFFRACTION' ? ? ? 15 ? t_trig_c_planes 2.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 68 ? t_gen_planes 5.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 521 ? t_it 20.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 0 ? t_nbd 5.00 SEMIHARMONIC 'X-RAY DIFFRACTION' ? 2.42 ? ? ? t_omega_torsion ? ? 'X-RAY DIFFRACTION' ? 19.55 ? ? ? t_other_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_improper_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 67 ? t_chiral_improper_torsion 5.00 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_sum_occupancies ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_distance ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_angle ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 674 ? t_ideal_dist_contact 4.00 SEMIHARMONIC # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.24 _refine_ls_shell.d_res_low 2.50 _refine_ls_shell.number_reflns_all 874 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 42 _refine_ls_shell.number_reflns_R_work 832 _refine_ls_shell.percent_reflns_obs 93.62 _refine_ls_shell.percent_reflns_R_free 4.81 _refine_ls_shell.R_factor_all 0.3776 _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3961 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.3766 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 5 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5N35 _struct.title 'Gadolinium phased PBP2 (SSO6202) at 2.2 Ang' _struct.pdbx_descriptor 'Polymerase Binding Protein 2 (PBP2)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5N35 _struct_keywords.text 'PolB1 binding protein 2, Archaeal DNA Polymerase Holoenzyme, Protein binding, Polymerase Binding Protein' _struct_keywords.pdbx_keywords 'POLYMERASE BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 3 ? G N N 3 ? H N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 4 ? TYR A 18 ? ASN A 12 TYR A 26 1 ? 15 HELX_P HELX_P2 AA2 GLU A 23 ? ARG A 33 ? GLU A 31 ARG A 41 1 ? 11 HELX_P HELX_P3 AA3 ASN A 37 ? MET A 48 ? ASN A 45 MET A 56 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 57 SG ? ? ? 1_555 A CYS 57 SG ? ? A CYS 65 A CYS 65 5_676 ? ? ? ? ? ? ? 2.042 ? metalc1 metalc ? ? A GLU 52 OE1 ? ? ? 1_555 B GD . GD ? ? A GLU 60 A GD 100 1_555 ? ? ? ? ? ? ? 2.255 ? metalc2 metalc ? ? A LYS 53 O ? ? ? 1_555 C GD . GD ? ? A LYS 61 A GD 101 1_555 ? ? ? ? ? ? ? 2.621 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 20 ? GLY A 22 ? SER A 28 GLY A 30 AA1 2 CYS A 57 ? LEU A 60 ? CYS A 65 LEU A 68 AA1 3 ILE A 51 ? LYS A 53 ? ILE A 59 LYS A 61 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 21 ? N VAL A 29 O TYR A 58 ? O TYR A 66 AA1 2 3 O ASN A 59 ? O ASN A 67 N GLU A 52 ? N GLU A 60 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GD 100 ? 1 'binding site for residue GD A 100' AC2 Software A GD 101 ? 2 'binding site for residue GD A 101' AC3 Software A GOL 102 ? 9 'binding site for residue GOL A 102' AC4 Software A NO3 103 ? 5 'binding site for residue NO3 A 103' AC5 Software A GOL 104 ? 4 'binding site for residue GOL A 104' AC6 Software A GOL 105 ? 4 'binding site for residue GOL A 105' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 GLU A 52 ? GLU A 60 . ? 1_555 ? 2 AC2 2 LYS A 53 ? LYS A 61 . ? 1_555 ? 3 AC2 2 GLY A 54 ? GLY A 62 . ? 1_555 ? 4 AC3 9 GLY A 22 ? GLY A 30 . ? 1_555 ? 5 AC3 9 GLY A 22 ? GLY A 30 . ? 5_676 ? 6 AC3 9 GLU A 23 ? GLU A 31 . ? 5_676 ? 7 AC3 9 ILE A 24 ? ILE A 32 . ? 1_555 ? 8 AC3 9 ILE A 24 ? ILE A 32 . ? 5_676 ? 9 AC3 9 VAL A 25 ? VAL A 33 . ? 1_555 ? 10 AC3 9 VAL A 25 ? VAL A 33 . ? 5_676 ? 11 AC3 9 GLY A 56 ? GLY A 64 . ? 1_555 ? 12 AC3 9 GLY A 56 ? GLY A 64 . ? 5_676 ? 13 AC4 5 ILE A 12 ? ILE A 20 . ? 3_565 ? 14 AC4 5 LYS A 16 ? LYS A 24 . ? 3_565 ? 15 AC4 5 ASP A 29 ? ASP A 37 . ? 1_555 ? 16 AC4 5 ARG A 33 ? ARG A 41 . ? 1_555 ? 17 AC4 5 ILE A 50 ? ILE A 58 . ? 3_565 ? 18 AC5 4 LYS A 53 ? LYS A 61 . ? 1_555 ? 19 AC5 4 GLY A 54 ? GLY A 62 . ? 1_555 ? 20 AC5 4 GLU A 55 ? GLU A 63 . ? 1_555 ? 21 AC5 4 GLY A 56 ? GLY A 64 . ? 1_555 ? 22 AC6 4 ASN A 37 ? ASN A 45 . ? 1_555 ? 23 AC6 4 GLN A 39 ? GLN A 47 . ? 1_555 ? 24 AC6 4 ALA A 40 ? ALA A 48 . ? 1_555 ? 25 AC6 4 SER A 43 ? SER A 51 . ? 1_555 ? # _atom_sites.entry_id 5N35 _atom_sites.fract_transf_matrix[1][1] 0.016090 _atom_sites.fract_transf_matrix[1][2] 0.009290 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018579 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.028027 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C GD H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 9 ? ? ? A . n A 1 2 SER 2 10 ? ? ? A . n A 1 3 VAL 3 11 11 VAL VAL A . n A 1 4 ASN 4 12 12 ASN ASN A . n A 1 5 GLN 5 13 13 GLN GLN A . n A 1 6 LYS 6 14 14 LYS LYS A . n A 1 7 GLU 7 15 15 GLU GLU A . n A 1 8 ILE 8 16 16 ILE ILE A . n A 1 9 GLU 9 17 17 GLU GLU A . n A 1 10 ILE 10 18 18 ILE ILE A . n A 1 11 ALA 11 19 19 ALA ALA A . n A 1 12 ILE 12 20 20 ILE ILE A . n A 1 13 GLU 13 21 21 GLU GLU A . n A 1 14 TYR 14 22 22 TYR TYR A . n A 1 15 PHE 15 23 23 PHE PHE A . n A 1 16 LYS 16 24 24 LYS LYS A . n A 1 17 ASN 17 25 25 ASN ASN A . n A 1 18 TYR 18 26 26 TYR TYR A . n A 1 19 ILE 19 27 27 ILE ILE A . n A 1 20 SER 20 28 28 SER SER A . n A 1 21 VAL 21 29 29 VAL VAL A . n A 1 22 GLY 22 30 30 GLY GLY A . n A 1 23 GLU 23 31 31 GLU GLU A . n A 1 24 ILE 24 32 32 ILE ILE A . n A 1 25 VAL 25 33 33 VAL VAL A . n A 1 26 ALA 26 34 34 ALA ALA A . n A 1 27 THR 27 35 35 THR THR A . n A 1 28 MET 28 36 36 MET MET A . n A 1 29 ASP 29 37 37 ASP ASP A . n A 1 30 LEU 30 38 38 LEU LEU A . n A 1 31 LYS 31 39 39 LYS LYS A . n A 1 32 ALA 32 40 40 ALA ALA A . n A 1 33 ARG 33 41 41 ARG ARG A . n A 1 34 GLY 34 42 42 GLY GLY A . n A 1 35 ILE 35 43 43 ILE ILE A . n A 1 36 SER 36 44 44 SER SER A . n A 1 37 ASN 37 45 45 ASN ASN A . n A 1 38 PRO 38 46 46 PRO PRO A . n A 1 39 GLN 39 47 47 GLN GLN A . n A 1 40 ALA 40 48 48 ALA ALA A . n A 1 41 VAL 41 49 49 VAL VAL A . n A 1 42 ILE 42 50 50 ILE ILE A . n A 1 43 SER 43 51 51 SER SER A . n A 1 44 LYS 44 52 52 LYS LYS A . n A 1 45 LEU 45 53 53 LEU LEU A . n A 1 46 ILE 46 54 54 ILE ILE A . n A 1 47 GLU 47 55 55 GLU GLU A . n A 1 48 MET 48 56 56 MET MET A . n A 1 49 GLY 49 57 57 GLY GLY A . n A 1 50 ILE 50 58 58 ILE ILE A . n A 1 51 ILE 51 59 59 ILE ILE A . n A 1 52 GLU 52 60 60 GLU GLU A . n A 1 53 LYS 53 61 61 LYS LYS A . n A 1 54 GLY 54 62 62 GLY GLY A . n A 1 55 GLU 55 63 63 GLU GLU A . n A 1 56 GLY 56 64 64 GLY GLY A . n A 1 57 CYS 57 65 65 CYS CYS A . n A 1 58 TYR 58 66 66 TYR TYR A . n A 1 59 ASN 59 67 67 ASN ASN A . n A 1 60 LEU 60 68 68 LEU LEU A . n A 1 61 VAL 61 69 69 VAL VAL A . n A 1 62 ARG 62 70 70 ARG ARG A . n A 1 63 LYS 63 71 ? ? ? A . n A 1 64 SER 64 72 ? ? ? A . n A 1 65 THR 65 73 ? ? ? A . n A 1 66 ASP 66 74 ? ? ? A . n A 1 67 LYS 67 75 ? ? ? A . n A 1 68 LYS 68 76 ? ? ? A . n A 1 69 LEU 69 77 ? ? ? A . n A 1 70 GLU 70 78 ? ? ? A . n A 1 71 HIS 71 79 ? ? ? A . n A 1 72 HIS 72 80 ? ? ? A . n A 1 73 HIS 73 81 ? ? ? A . n A 1 74 HIS 74 82 ? ? ? A . n A 1 75 HIS 75 83 ? ? ? A . n A 1 76 HIS 76 84 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GD 1 100 100 GD GD A . C 2 GD 1 101 101 GD GD A . D 3 GOL 1 102 102 GOL GOL A . E 4 NO3 1 103 103 NO3 NO3 A . F 3 GOL 1 104 104 GOL GOL A . G 3 GOL 1 105 105 GOL GOL A . H 5 HOH 1 201 37 HOH HOH A . H 5 HOH 2 202 13 HOH HOH A . H 5 HOH 3 203 42 HOH HOH A . H 5 HOH 4 204 39 HOH HOH A . H 5 HOH 5 205 14 HOH HOH A . H 5 HOH 6 206 16 HOH HOH A . H 5 HOH 7 207 19 HOH HOH A . H 5 HOH 8 208 46 HOH HOH A . H 5 HOH 9 209 52 HOH HOH A . H 5 HOH 10 210 33 HOH HOH A . H 5 HOH 11 211 22 HOH HOH A . H 5 HOH 12 212 6 HOH HOH A . H 5 HOH 13 213 5 HOH HOH A . H 5 HOH 14 214 40 HOH HOH A . H 5 HOH 15 215 12 HOH HOH A . H 5 HOH 16 216 49 HOH HOH A . H 5 HOH 17 217 48 HOH HOH A . H 5 HOH 18 218 47 HOH HOH A . H 5 HOH 19 219 18 HOH HOH A . H 5 HOH 20 220 50 HOH HOH A . H 5 HOH 21 221 11 HOH HOH A . H 5 HOH 22 222 51 HOH HOH A . H 5 HOH 23 223 44 HOH HOH A . H 5 HOH 24 224 35 HOH HOH A . H 5 HOH 25 225 38 HOH HOH A . H 5 HOH 26 226 43 HOH HOH A . H 5 HOH 27 227 41 HOH HOH A . H 5 HOH 28 228 32 HOH HOH A . H 5 HOH 29 229 34 HOH HOH A . H 5 HOH 30 230 45 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1070 ? 1 MORE -15 ? 1 'SSA (A^2)' 3940 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-05-17 2 'Structure model' 1 1 2017-12-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Structure summary' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category audit_author # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.11.2 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHARP ? ? ? . 4 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 9 ? A MET 1 2 1 Y 1 A SER 10 ? A SER 2 3 1 Y 1 A LYS 71 ? A LYS 63 4 1 Y 1 A SER 72 ? A SER 64 5 1 Y 1 A THR 73 ? A THR 65 6 1 Y 1 A ASP 74 ? A ASP 66 7 1 Y 1 A LYS 75 ? A LYS 67 8 1 Y 1 A LYS 76 ? A LYS 68 9 1 Y 1 A LEU 77 ? A LEU 69 10 1 Y 1 A GLU 78 ? A GLU 70 11 1 Y 1 A HIS 79 ? A HIS 71 12 1 Y 1 A HIS 80 ? A HIS 72 13 1 Y 1 A HIS 81 ? A HIS 73 14 1 Y 1 A HIS 82 ? A HIS 74 15 1 Y 1 A HIS 83 ? A HIS 75 16 1 Y 1 A HIS 84 ? A HIS 76 # _pdbx_audit_support.funding_organization MINECO _pdbx_audit_support.country Spain _pdbx_audit_support.grant_number BFU2015-64541-R _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'GADOLINIUM ATOM' GD 3 GLYCEROL GOL 4 'NITRATE ION' NO3 5 water HOH #