data_5O6F # _entry.id 5O6F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5O6F pdb_00005o6f 10.2210/pdb5o6f/pdb WWPDB D_1200005113 ? ? BMRB 26802 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details . _pdbx_database_related.db_id 26802 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5O6F _pdbx_database_status.recvd_initial_deposition_date 2017-06-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Caruso, I.P.' 1 ? 'Panwalkar, V.' 2 ? 'Coronado, M.A.' 3 ? 'Dingley, A.J.' 4 ? 'Cornelio, M.L.' 5 ? 'Willbold, D.' 6 ? 'Arni, R.K.' 7 ? 'Eberle, R.J.' 8 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'FEBS J.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1742-4658 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 285 _citation.language ? _citation.page_first 372 _citation.page_last 390 _citation.title 'Structure and interaction of Corynebacterium pseudotuberculosis cold shock protein A with Y-box single-stranded DNA fragment.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1111/febs.14350 _citation.pdbx_database_id_PubMed 29197185 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Caruso, I.P.' 1 ? primary 'Panwalkar, V.' 2 ? primary 'Coronado, M.A.' 3 ? primary 'Dingley, A.J.' 4 ? primary 'Cornelio, M.L.' 5 ? primary 'Willbold, D.' 6 ? primary 'Arni, R.K.' 7 ? primary 'Eberle, R.J.' 8 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5O6F _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.000 _cell.length_a_esd ? _cell.length_b 1.000 _cell.length_b_esd ? _cell.length_c 1.000 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5O6F _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Cold-shock protein' _entity.formula_weight 9129.919 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAQGTVKWFNAEKGFGFIAPDDGSADVFVHYSEIQGNGFRTLEENQKVEFEIGEGAKGPQAQQVHALGGENLYFQGHHHH HH ; _entity_poly.pdbx_seq_one_letter_code_can ;MAQGTVKWFNAEKGFGFIAPDDGSADVFVHYSEIQGNGFRTLEENQKVEFEIGEGAKGPQAQQVHALGGENLYFQGHHHH HH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 GLN n 1 4 GLY n 1 5 THR n 1 6 VAL n 1 7 LYS n 1 8 TRP n 1 9 PHE n 1 10 ASN n 1 11 ALA n 1 12 GLU n 1 13 LYS n 1 14 GLY n 1 15 PHE n 1 16 GLY n 1 17 PHE n 1 18 ILE n 1 19 ALA n 1 20 PRO n 1 21 ASP n 1 22 ASP n 1 23 GLY n 1 24 SER n 1 25 ALA n 1 26 ASP n 1 27 VAL n 1 28 PHE n 1 29 VAL n 1 30 HIS n 1 31 TYR n 1 32 SER n 1 33 GLU n 1 34 ILE n 1 35 GLN n 1 36 GLY n 1 37 ASN n 1 38 GLY n 1 39 PHE n 1 40 ARG n 1 41 THR n 1 42 LEU n 1 43 GLU n 1 44 GLU n 1 45 ASN n 1 46 GLN n 1 47 LYS n 1 48 VAL n 1 49 GLU n 1 50 PHE n 1 51 GLU n 1 52 ILE n 1 53 GLY n 1 54 GLU n 1 55 GLY n 1 56 ALA n 1 57 LYS n 1 58 GLY n 1 59 PRO n 1 60 GLN n 1 61 ALA n 1 62 GLN n 1 63 GLN n 1 64 VAL n 1 65 HIS n 1 66 ALA n 1 67 LEU n 1 68 GLY n 1 69 GLY n 1 70 GLU n 1 71 ASN n 1 72 LEU n 1 73 TYR n 1 74 PHE n 1 75 GLN n 1 76 GLY n 1 77 HIS n 1 78 HIS n 1 79 HIS n 1 80 HIS n 1 81 HIS n 1 82 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 82 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'cspA, Cp29156_0227, CpMEX31_0248' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Corynebacterium pseudotuberculosis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1719 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A1L6CY17_CORPS _struct_ref.pdbx_db_accession A0A1L6CY17 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MAQGTVKWFNAEKGFGFIAPDDGSADVFVHYSEIQGNGFRTLEENQKVEFEIGEGAKGPQAQQVHAL _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5O6F _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 67 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A1L6CY17 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 67 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 67 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5O6F GLY A 68 ? UNP A0A1L6CY17 ? ? 'expression tag' 68 1 1 5O6F GLY A 69 ? UNP A0A1L6CY17 ? ? 'expression tag' 69 2 1 5O6F GLU A 70 ? UNP A0A1L6CY17 ? ? 'expression tag' 70 3 1 5O6F ASN A 71 ? UNP A0A1L6CY17 ? ? 'expression tag' 71 4 1 5O6F LEU A 72 ? UNP A0A1L6CY17 ? ? 'expression tag' 72 5 1 5O6F TYR A 73 ? UNP A0A1L6CY17 ? ? 'expression tag' 73 6 1 5O6F PHE A 74 ? UNP A0A1L6CY17 ? ? 'expression tag' 74 7 1 5O6F GLN A 75 ? UNP A0A1L6CY17 ? ? 'expression tag' 75 8 1 5O6F GLY A 76 ? UNP A0A1L6CY17 ? ? 'expression tag' 76 9 1 5O6F HIS A 77 ? UNP A0A1L6CY17 ? ? 'expression tag' 77 10 1 5O6F HIS A 78 ? UNP A0A1L6CY17 ? ? 'expression tag' 78 11 1 5O6F HIS A 79 ? UNP A0A1L6CY17 ? ? 'expression tag' 79 12 1 5O6F HIS A 80 ? UNP A0A1L6CY17 ? ? 'expression tag' 80 13 1 5O6F HIS A 81 ? UNP A0A1L6CY17 ? ? 'expression tag' 81 14 1 5O6F HIS A 82 ? UNP A0A1L6CY17 ? ? 'expression tag' 82 15 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '3D 1H-13C NOESY' 2 anisotropic 2 1 1 '3D 1H-15N NOESY' 2 anisotropic 3 1 1 '3D 1H-13C NOESY aromatic' 2 anisotropic 4 1 1 '3D HNCA' 1 anisotropic 5 1 1 '3D HNCO' 1 anisotropic 6 1 1 '3D CC(CO)NH' 1 anisotropic 7 1 1 '3D H(CCO)NH' 1 anisotropic 8 1 1 '3D HCCH-COSY' 1 anisotropic 9 1 1 '2D 1H-15N HSQC' 1 anisotropic 10 1 1 '2D 1H-13C HSQC' 1 anisotropic 11 1 1 '2D (HB)CB(CGCD)HD' 1 anisotropic 12 1 1 '2D (HB)CB(CGCDCE)HE' 1 anisotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 50 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label '[13C,15N]Cp-CspA' _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents ;0.8 mM [U-99% 13C; U-99% 15N] Cold shock protein A, 50 mM potassium phosphate, 50 mM sodium chloride, 0.1 % sodium azide, 1 mM DSS, 93% H2O/7% D2O ; _pdbx_nmr_sample_details.solvent_system '93% H2O/7% D2O' _pdbx_nmr_sample_details.label '[13C,15N]Cp-CspA' _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ;50 mM potassium phosphate, 50 mM NaCl, 0.1% (w/v) NaN3, 1 mM DSS, 0.8 mM [U-99% 13C; U-99% 15N] Corynebacterium pseudotuberculosis cold shock protein A, 93% H2O/7% D2O ; # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 AVANCE ? Bruker 600 ? 2 INOVA ? Varian 900 ? # _pdbx_nmr_refine.entry_id 5O6F _pdbx_nmr_refine.method 'semi-autometed noe assignment, simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 4 # _pdbx_nmr_ensemble.entry_id 5O6F _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5O6F _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 2 'data analysis' 'CcpNmr Analysis' ? 'Vranken, Boucher, Stevens, Fogh, Pajon, Llinas, Ulrich, Markley, Ionides, Laue' 3 'structure calculation' ARIA 2.3.1 'Rieping, Habeck, Bardiaux, Bernard, Malliavin, Nilges' 4 refinement CNS 1.21 Brunger # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5O6F _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5O6F _struct.title 'NMR structure of cold shock protein A from Corynebacterium pseudotuberculosis' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5O6F _struct_keywords.text 'cold shock protein, beta-barrel, DNA binding, DNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 2 ? ASN A 10 ? ALA A 2 ASN A 10 AA1 2 PHE A 15 ? PRO A 20 ? PHE A 15 PRO A 20 AA1 3 VAL A 27 ? HIS A 30 ? VAL A 27 HIS A 30 AA1 4 GLY A 58 ? GLY A 68 ? GLY A 58 GLY A 68 AA1 5 GLN A 46 ? GLY A 55 ? GLN A 46 GLY A 55 AA1 6 ALA A 2 ? ASN A 10 ? ALA A 2 ASN A 10 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 5 ? N THR A 5 O ALA A 19 ? O ALA A 19 AA1 2 3 N GLY A 16 ? N GLY A 16 O VAL A 29 ? O VAL A 29 AA1 3 4 N PHE A 28 ? N PHE A 28 O PRO A 59 ? O PRO A 59 AA1 4 5 O GLN A 62 ? O GLN A 62 N GLU A 51 ? N GLU A 51 AA1 5 6 O PHE A 50 ? O PHE A 50 N ALA A 2 ? N ALA A 2 # _database_PDB_matrix.entry_id 5O6F _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 5O6F _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 TRP 8 8 8 TRP TRP A . n A 1 9 PHE 9 9 9 PHE PHE A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 PHE 17 17 17 PHE PHE A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 PHE 28 28 28 PHE PHE A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 HIS 30 30 30 HIS HIS A . n A 1 31 TYR 31 31 31 TYR TYR A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 PHE 39 39 39 PHE PHE A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 THR 41 41 41 THR THR A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 ASN 45 45 45 ASN ASN A . n A 1 46 GLN 46 46 46 GLN GLN A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 PRO 59 59 59 PRO PRO A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 GLN 63 63 63 GLN GLN A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 HIS 65 65 65 HIS HIS A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 PHE 74 74 74 PHE PHE A . n A 1 75 GLN 75 75 75 GLN GLN A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 HIS 77 77 77 HIS HIS A . n A 1 78 HIS 78 78 78 HIS HIS A . n A 1 79 HIS 79 79 79 HIS HIS A . n A 1 80 HIS 80 80 80 HIS HIS A . n A 1 81 HIS 81 81 81 HIS HIS A . n A 1 82 HIS 82 82 82 HIS HIS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 5860 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-07-19 2 'Structure model' 1 1 2017-12-13 3 'Structure model' 1 2 2018-01-31 4 'Structure model' 1 3 2019-05-08 5 'Structure model' 1 4 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 4 'Structure model' pdbx_nmr_software 5 5 'Structure model' database_2 6 5 'Structure model' pdbx_database_status 7 5 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.pdbx_database_id_DOI' 6 2 'Structure model' '_citation.pdbx_database_id_PubMed' 7 2 'Structure model' '_citation.title' 8 2 'Structure model' '_citation.year' 9 2 'Structure model' '_citation_author.name' 10 3 'Structure model' '_citation.journal_volume' 11 3 'Structure model' '_citation.page_first' 12 3 'Structure model' '_citation.page_last' 13 3 'Structure model' '_citation.year' 14 4 'Structure model' '_pdbx_nmr_software.name' 15 5 'Structure model' '_database_2.pdbx_DOI' 16 5 'Structure model' '_database_2.pdbx_database_accession' 17 5 'Structure model' '_pdbx_database_status.status_code_nmr_data' 18 5 'Structure model' '_pdbx_nmr_spectrometer.model' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'Cold shock protein A' 0.8 ? mM '[U-99% 13C; U-99% 15N]' 1 'potassium phosphate' 50 ? mM 'natural abundance' 1 'sodium chloride' 50 ? mM 'natural abundance' 1 'sodium azide' 0.1 ? % 'natural abundance' 1 DSS 1 ? mM 'natural abundance' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HZ3 A LYS 7 ? ? OD2 A ASP 26 ? ? 1.58 2 4 HZ2 A LYS 7 ? ? OD1 A ASP 26 ? ? 1.58 3 5 HZ1 A LYS 7 ? ? OD1 A ASP 26 ? ? 1.58 4 14 HZ2 A LYS 7 ? ? OD1 A ASP 26 ? ? 1.60 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 24 ? ? 51.02 91.80 2 1 ASP A 26 ? ? 59.73 83.96 3 1 ASN A 37 ? ? -91.66 40.84 4 1 ARG A 40 ? ? -107.02 42.57 5 1 GLU A 70 ? ? -69.53 99.98 6 1 LEU A 72 ? ? -100.10 55.50 7 1 HIS A 77 ? ? 71.75 -58.79 8 1 HIS A 79 ? ? 59.88 75.97 9 1 HIS A 81 ? ? -174.74 136.62 10 2 ASP A 22 ? ? -78.64 24.90 11 2 ARG A 40 ? ? -84.49 48.80 12 2 ASN A 45 ? ? 72.60 33.28 13 2 GLU A 70 ? ? 71.13 -54.68 14 2 PHE A 74 ? ? -167.23 -44.16 15 3 TRP A 8 ? ? -171.08 149.21 16 3 SER A 24 ? ? 49.02 85.61 17 3 ASP A 26 ? ? 57.87 73.48 18 3 ASN A 37 ? ? -79.25 43.07 19 3 ASN A 45 ? ? 70.75 31.65 20 3 GLU A 70 ? ? 53.76 75.50 21 3 ASN A 71 ? ? 73.89 -62.00 22 3 LEU A 72 ? ? 67.37 -76.29 23 3 TYR A 73 ? ? -102.87 78.13 24 3 HIS A 79 ? ? -80.97 39.70 25 3 HIS A 80 ? ? -164.49 47.53 26 3 HIS A 81 ? ? -153.12 -46.25 27 4 ASP A 22 ? ? -78.07 24.75 28 4 SER A 24 ? ? 44.87 86.37 29 4 ASP A 26 ? ? 60.10 89.37 30 4 LEU A 67 ? ? -101.16 -170.00 31 4 HIS A 80 ? ? 53.44 72.50 32 5 ASP A 26 ? ? -36.57 106.97 33 5 ASN A 37 ? ? -88.07 44.00 34 5 ARG A 40 ? ? -108.63 44.28 35 5 LEU A 67 ? ? -94.98 52.25 36 6 SER A 24 ? ? 48.33 87.77 37 6 ASP A 26 ? ? 59.48 80.39 38 6 ASN A 37 ? ? -81.94 43.75 39 6 ASN A 71 ? ? 63.99 85.05 40 6 TYR A 73 ? ? -110.65 -167.13 41 6 HIS A 77 ? ? 63.31 63.93 42 6 HIS A 78 ? ? -156.53 36.98 43 7 ASP A 22 ? ? -75.68 22.76 44 7 SER A 24 ? ? 57.85 88.79 45 7 ASP A 26 ? ? 55.47 77.56 46 7 ASN A 37 ? ? -100.97 42.94 47 7 ARG A 40 ? ? -107.59 49.82 48 7 GLU A 70 ? ? -100.95 76.22 49 7 LEU A 72 ? ? 58.41 78.69 50 7 TYR A 73 ? ? -80.57 36.30 51 7 HIS A 78 ? ? 67.86 -81.73 52 7 HIS A 79 ? ? -98.86 -69.45 53 7 HIS A 80 ? ? -162.87 9.57 54 7 HIS A 81 ? ? -170.02 121.66 55 8 SER A 24 ? ? 63.10 69.54 56 8 ASP A 26 ? ? -35.85 105.13 57 8 ASN A 37 ? ? -88.27 42.86 58 8 ARG A 40 ? ? -91.06 59.90 59 9 ASP A 22 ? ? -79.91 23.42 60 9 ASP A 26 ? ? -39.45 113.81 61 9 ARG A 40 ? ? -107.59 55.65 62 9 GLU A 70 ? ? -113.73 51.98 63 9 HIS A 79 ? ? -112.91 69.80 64 9 HIS A 80 ? ? -165.57 -63.15 65 9 HIS A 81 ? ? 69.35 130.83 66 10 TRP A 8 ? ? -171.37 149.57 67 10 ASP A 22 ? ? -79.07 23.26 68 10 SER A 24 ? ? 39.89 80.58 69 10 ASP A 26 ? ? 57.82 88.47 70 10 ASN A 37 ? ? -96.66 42.00 71 10 HIS A 79 ? ? 63.87 71.53 72 11 ASP A 22 ? ? -76.81 25.16 73 11 SER A 24 ? ? 34.55 76.18 74 11 ASP A 26 ? ? 55.43 89.18 75 11 LEU A 67 ? ? -108.76 48.45 76 11 HIS A 78 ? ? 65.84 111.09 77 12 SER A 24 ? ? 47.95 82.72 78 12 ASP A 26 ? ? 57.04 83.41 79 12 ASN A 37 ? ? -104.16 41.99 80 12 HIS A 77 ? ? -111.44 58.56 81 13 ASP A 22 ? ? -75.30 24.52 82 13 ASP A 26 ? ? -39.52 108.57 83 13 ASN A 37 ? ? -88.54 40.27 84 13 TYR A 73 ? ? 58.22 75.01 85 13 GLN A 75 ? ? -92.66 45.79 86 13 HIS A 81 ? ? -148.58 13.50 87 14 SER A 24 ? ? 48.83 79.83 88 14 ASP A 26 ? ? 63.35 96.13 89 14 ASN A 37 ? ? -94.95 41.10 90 14 ARG A 40 ? ? -107.66 47.78 91 14 LEU A 72 ? ? -84.94 49.44 92 14 HIS A 78 ? ? 72.93 -86.12 93 14 HIS A 80 ? ? -146.86 -41.82 94 15 TRP A 8 ? ? -172.52 148.09 95 15 SER A 24 ? ? 54.10 81.07 96 15 ASP A 26 ? ? 57.03 77.14 97 15 ASN A 37 ? ? -99.60 41.92 98 15 LEU A 67 ? ? -99.07 38.49 # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'gel filtration' monomer 2 1 'native gel electrophoresis' monomer #