data_5WZY # _entry.id 5WZY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5WZY WWPDB D_1300002663 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5WZY _pdbx_database_status.recvd_initial_deposition_date 2017-01-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kasuya, G.' 1 ? 'Hattori, M.' 2 ? 'Nureki, O.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Sci Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2045-2322 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 7 _citation.language ? _citation.page_first 45208 _citation.page_last 45208 _citation.title 'Structural insights into the nucleotide base specificity of P2X receptors' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/srep45208 _citation.pdbx_database_id_PubMed 28332633 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kasuya, G.' 1 ? primary 'Fujiwara, Y.' 2 ? primary 'Tsukamoto, H.' 3 ? primary 'Morinaga, S.' 4 ? primary 'Ryu, S.' 5 ? primary 'Touhara, K.' 6 ? primary 'Ishitani, R.' 7 ? primary 'Furutani, Y.' 8 ? primary 'Hattori, M.' 9 ? primary 'Nureki, O.' 10 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 5WZY _cell.details ? _cell.formula_units_Z ? _cell.length_a 129.242 _cell.length_a_esd ? _cell.length_b 129.242 _cell.length_b_esd ? _cell.length_c 251.825 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 18 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WZY _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'p2X purinoceptor' 38117.625 1 ? ? 'UNP residues 28-365' ? 2 branched man ;alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 1072.964 1 ? ? ? ? 3 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 5 non-polymer syn "CYTIDINE-5'-TRIPHOSPHATE" 483.156 1 ? ? ? ? 6 water nat water 18.015 72 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSKKVGTLNRFTQALVIAYVIGYVCVYNKGYQDTDTVLSSVTTKVKGIALTKTSELGERIWDVADYIIPPQEDGSFFVL TNMIITTNQTQSKCAENPTPASTCTSHRDCKRGFNDARGDGVRTGRCVSYSASVKTCEVLSWCPLEKIVDPPNPPLLADA ERFTVLIKNNIRYPKFNFNKRNILPNINSSYLTHCVFSRKTDPDCPIFRLGDIVGEAEEDFQIMAVRGGVMGVQIRWDCD LDMPQSWCVPRYTFRRLDNKDPDNNVAPGYNFRFAKYYKNSDGTETRTLIKGYGIRFDVMVFGQAGKFNIIPTLLNIGAG LALLGLVNVICDWIVLTFMK ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSKKVGTLNRFTQALVIAYVIGYVCVYNKGYQDTDTVLSSVTTKVKGIALTKTSELGERIWDVADYIIPPQEDGSFFVL TNMIITTNQTQSKCAENPTPASTCTSHRDCKRGFNDARGDGVRTGRCVSYSASVKTCEVLSWCPLEKIVDPPNPPLLADA ERFTVLIKNNIRYPKFNFNKRNILPNINSSYLTHCVFSRKTDPDCPIFRLGDIVGEAEEDFQIMAVRGGVMGVQIRWDCD LDMPQSWCVPRYTFRRLDNKDPDNNVAPGYNFRFAKYYKNSDGTETRTLIKGYGIRFDVMVFGQAGKFNIIPTLLNIGAG LALLGLVNVICDWIVLTFMK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 LYS n 1 5 LYS n 1 6 VAL n 1 7 GLY n 1 8 THR n 1 9 LEU n 1 10 ASN n 1 11 ARG n 1 12 PHE n 1 13 THR n 1 14 GLN n 1 15 ALA n 1 16 LEU n 1 17 VAL n 1 18 ILE n 1 19 ALA n 1 20 TYR n 1 21 VAL n 1 22 ILE n 1 23 GLY n 1 24 TYR n 1 25 VAL n 1 26 CYS n 1 27 VAL n 1 28 TYR n 1 29 ASN n 1 30 LYS n 1 31 GLY n 1 32 TYR n 1 33 GLN n 1 34 ASP n 1 35 THR n 1 36 ASP n 1 37 THR n 1 38 VAL n 1 39 LEU n 1 40 SER n 1 41 SER n 1 42 VAL n 1 43 THR n 1 44 THR n 1 45 LYS n 1 46 VAL n 1 47 LYS n 1 48 GLY n 1 49 ILE n 1 50 ALA n 1 51 LEU n 1 52 THR n 1 53 LYS n 1 54 THR n 1 55 SER n 1 56 GLU n 1 57 LEU n 1 58 GLY n 1 59 GLU n 1 60 ARG n 1 61 ILE n 1 62 TRP n 1 63 ASP n 1 64 VAL n 1 65 ALA n 1 66 ASP n 1 67 TYR n 1 68 ILE n 1 69 ILE n 1 70 PRO n 1 71 PRO n 1 72 GLN n 1 73 GLU n 1 74 ASP n 1 75 GLY n 1 76 SER n 1 77 PHE n 1 78 PHE n 1 79 VAL n 1 80 LEU n 1 81 THR n 1 82 ASN n 1 83 MET n 1 84 ILE n 1 85 ILE n 1 86 THR n 1 87 THR n 1 88 ASN n 1 89 GLN n 1 90 THR n 1 91 GLN n 1 92 SER n 1 93 LYS n 1 94 CYS n 1 95 ALA n 1 96 GLU n 1 97 ASN n 1 98 PRO n 1 99 THR n 1 100 PRO n 1 101 ALA n 1 102 SER n 1 103 THR n 1 104 CYS n 1 105 THR n 1 106 SER n 1 107 HIS n 1 108 ARG n 1 109 ASP n 1 110 CYS n 1 111 LYS n 1 112 ARG n 1 113 GLY n 1 114 PHE n 1 115 ASN n 1 116 ASP n 1 117 ALA n 1 118 ARG n 1 119 GLY n 1 120 ASP n 1 121 GLY n 1 122 VAL n 1 123 ARG n 1 124 THR n 1 125 GLY n 1 126 ARG n 1 127 CYS n 1 128 VAL n 1 129 SER n 1 130 TYR n 1 131 SER n 1 132 ALA n 1 133 SER n 1 134 VAL n 1 135 LYS n 1 136 THR n 1 137 CYS n 1 138 GLU n 1 139 VAL n 1 140 LEU n 1 141 SER n 1 142 TRP n 1 143 CYS n 1 144 PRO n 1 145 LEU n 1 146 GLU n 1 147 LYS n 1 148 ILE n 1 149 VAL n 1 150 ASP n 1 151 PRO n 1 152 PRO n 1 153 ASN n 1 154 PRO n 1 155 PRO n 1 156 LEU n 1 157 LEU n 1 158 ALA n 1 159 ASP n 1 160 ALA n 1 161 GLU n 1 162 ARG n 1 163 PHE n 1 164 THR n 1 165 VAL n 1 166 LEU n 1 167 ILE n 1 168 LYS n 1 169 ASN n 1 170 ASN n 1 171 ILE n 1 172 ARG n 1 173 TYR n 1 174 PRO n 1 175 LYS n 1 176 PHE n 1 177 ASN n 1 178 PHE n 1 179 ASN n 1 180 LYS n 1 181 ARG n 1 182 ASN n 1 183 ILE n 1 184 LEU n 1 185 PRO n 1 186 ASN n 1 187 ILE n 1 188 ASN n 1 189 SER n 1 190 SER n 1 191 TYR n 1 192 LEU n 1 193 THR n 1 194 HIS n 1 195 CYS n 1 196 VAL n 1 197 PHE n 1 198 SER n 1 199 ARG n 1 200 LYS n 1 201 THR n 1 202 ASP n 1 203 PRO n 1 204 ASP n 1 205 CYS n 1 206 PRO n 1 207 ILE n 1 208 PHE n 1 209 ARG n 1 210 LEU n 1 211 GLY n 1 212 ASP n 1 213 ILE n 1 214 VAL n 1 215 GLY n 1 216 GLU n 1 217 ALA n 1 218 GLU n 1 219 GLU n 1 220 ASP n 1 221 PHE n 1 222 GLN n 1 223 ILE n 1 224 MET n 1 225 ALA n 1 226 VAL n 1 227 ARG n 1 228 GLY n 1 229 GLY n 1 230 VAL n 1 231 MET n 1 232 GLY n 1 233 VAL n 1 234 GLN n 1 235 ILE n 1 236 ARG n 1 237 TRP n 1 238 ASP n 1 239 CYS n 1 240 ASP n 1 241 LEU n 1 242 ASP n 1 243 MET n 1 244 PRO n 1 245 GLN n 1 246 SER n 1 247 TRP n 1 248 CYS n 1 249 VAL n 1 250 PRO n 1 251 ARG n 1 252 TYR n 1 253 THR n 1 254 PHE n 1 255 ARG n 1 256 ARG n 1 257 LEU n 1 258 ASP n 1 259 ASN n 1 260 LYS n 1 261 ASP n 1 262 PRO n 1 263 ASP n 1 264 ASN n 1 265 ASN n 1 266 VAL n 1 267 ALA n 1 268 PRO n 1 269 GLY n 1 270 TYR n 1 271 ASN n 1 272 PHE n 1 273 ARG n 1 274 PHE n 1 275 ALA n 1 276 LYS n 1 277 TYR n 1 278 TYR n 1 279 LYS n 1 280 ASN n 1 281 SER n 1 282 ASP n 1 283 GLY n 1 284 THR n 1 285 GLU n 1 286 THR n 1 287 ARG n 1 288 THR n 1 289 LEU n 1 290 ILE n 1 291 LYS n 1 292 GLY n 1 293 TYR n 1 294 GLY n 1 295 ILE n 1 296 ARG n 1 297 PHE n 1 298 ASP n 1 299 VAL n 1 300 MET n 1 301 VAL n 1 302 PHE n 1 303 GLY n 1 304 GLN n 1 305 ALA n 1 306 GLY n 1 307 LYS n 1 308 PHE n 1 309 ASN n 1 310 ILE n 1 311 ILE n 1 312 PRO n 1 313 THR n 1 314 LEU n 1 315 LEU n 1 316 ASN n 1 317 ILE n 1 318 GLY n 1 319 ALA n 1 320 GLY n 1 321 LEU n 1 322 ALA n 1 323 LEU n 1 324 LEU n 1 325 GLY n 1 326 LEU n 1 327 VAL n 1 328 ASN n 1 329 VAL n 1 330 ILE n 1 331 CYS n 1 332 ASP n 1 333 TRP n 1 334 ILE n 1 335 VAL n 1 336 LEU n 1 337 THR n 1 338 PHE n 1 339 MET n 1 340 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 340 _entity_src_gen.gene_src_common_name Zebrafish _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene p2rx4a _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Danio rerio' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7955 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'fall armyworm' _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q6NYR1_DANRE _struct_ref.pdbx_db_accession Q6NYR1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SKKVGTLNRFTQALVIAYVIGYVCVYNKGYQDTDTVLSSVTTKVKGIALTNTSELGERIWDVADYIIPPQEDGSFFVLTN MIITTNQTQSKCAENPTPASTCTSHRDCKRGFNDARGDGVRTGRCVSYSASVKTCEVLSWCPLEKIVDPPNPPLLADAEN FTVLIKNNIRYPKFNFNKRNILPNINSSYLTHCVFSRKTDPDCPIFRLGDIVGEAEEDFQIMAVHGGVMGVQIRWDCDLD MPQSWCVPRYTFRRLDNKDPDNNVAPGYNFRFAKYYKNSDGTETRTLIKGYGIRFDVMVFGQAGKFNIIPTLLNIGAGLA LLGLVNVICDWIVLTFMK ; _struct_ref.pdbx_align_begin 28 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5WZY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 340 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q6NYR1 _struct_ref_seq.db_align_beg 28 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 365 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 28 _struct_ref_seq.pdbx_auth_seq_align_end 365 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5WZY GLY A 1 ? UNP Q6NYR1 ? ? 'expression tag' 26 1 1 5WZY SER A 2 ? UNP Q6NYR1 ? ? 'expression tag' 27 2 1 5WZY LYS A 53 ? UNP Q6NYR1 ASN 78 conflict 78 3 1 5WZY ARG A 162 ? UNP Q6NYR1 ASN 187 conflict 187 4 1 5WZY ARG A 227 ? UNP Q6NYR1 HIS 252 conflict 252 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose ? 'C6 H12 O6' 180.156 CTP non-polymer . "CYTIDINE-5'-TRIPHOSPHATE" ? 'C9 H16 N3 O14 P3' 483.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose ? 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5WZY _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 5.31 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 76.83 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '3 mM CTP, 20-26% PEG 2000, 300 mM Mg(NO3)2, 100 mM Tris' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX225HE' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-05-17 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL41XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate 67.950 _reflns.entry_id 5WZY _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.7990 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 20237 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.800 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.800 _reflns.pdbx_Rmerge_I_obs 0.119 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.400 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.854 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.800 2.850 ? ? ? ? ? ? ? 98.800 ? ? ? ? 0.938 ? ? ? ? ? ? ? ? 5.200 ? 1.063 ? ? ? ? ? 1 1 ? ? 2.850 2.900 ? ? ? ? ? ? ? 99.800 ? ? ? ? 0.842 ? ? ? ? ? ? ? ? 6.000 ? 1.043 ? ? ? ? ? 2 1 ? ? 2.900 2.960 ? ? ? ? ? ? ? 99.900 ? ? ? ? 0.784 ? ? ? ? ? ? ? ? 6.600 ? 1.032 ? ? ? ? ? 3 1 ? ? 2.960 3.020 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.667 ? ? ? ? ? ? ? ? 7.100 ? 1.086 ? ? ? ? ? 4 1 ? ? 3.020 3.080 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.563 ? ? ? ? ? ? ? ? 7.300 ? 1.177 ? ? ? ? ? 5 1 ? ? 3.080 3.150 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.523 ? ? ? ? ? ? ? ? 7.400 ? 1.161 ? ? ? ? ? 6 1 ? ? 3.150 3.230 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.427 ? ? ? ? ? ? ? ? 7.600 ? 1.207 ? ? ? ? ? 7 1 ? ? 3.230 3.320 ? ? ? ? ? ? ? 99.900 ? ? ? ? 0.355 ? ? ? ? ? ? ? ? 7.800 ? 1.261 ? ? ? ? ? 8 1 ? ? 3.320 3.420 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.293 ? ? ? ? ? ? ? ? 7.900 ? 1.311 ? ? ? ? ? 9 1 ? ? 3.420 3.530 ? ? ? ? ? ? ? 99.900 ? ? ? ? 0.232 ? ? ? ? ? ? ? ? 8.200 ? 1.424 ? ? ? ? ? 10 1 ? ? 3.530 3.650 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.193 ? ? ? ? ? ? ? ? 8.200 ? 1.486 ? ? ? ? ? 11 1 ? ? 3.650 3.800 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.158 ? ? ? ? ? ? ? ? 8.400 ? 1.557 ? ? ? ? ? 12 1 ? ? 3.800 3.970 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.129 ? ? ? ? ? ? ? ? 8.400 ? 1.596 ? ? ? ? ? 13 1 ? ? 3.970 4.180 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.107 ? ? ? ? ? ? ? ? 8.500 ? 1.758 ? ? ? ? ? 14 1 ? ? 4.180 4.440 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.086 ? ? ? ? ? ? ? ? 8.700 ? 2.028 ? ? ? ? ? 15 1 ? ? 4.440 4.790 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.077 ? ? ? ? ? ? ? ? 8.700 ? 2.258 ? ? ? ? ? 16 1 ? ? 4.790 5.270 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.083 ? ? ? ? ? ? ? ? 8.600 ? 2.945 ? ? ? ? ? 17 1 ? ? 5.270 6.030 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.088 ? ? ? ? ? ? ? ? 8.400 ? 3.436 ? ? ? ? ? 18 1 ? ? 6.030 7.590 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.076 ? ? ? ? ? ? ? ? 8.500 ? 3.308 ? ? ? ? ? 19 1 ? ? 7.590 50.000 ? ? ? ? ? ? ? 98.100 ? ? ? ? 0.053 ? ? ? ? ? ? ? ? 8.100 ? 3.359 ? ? ? ? ? 20 1 ? ? # _refine.aniso_B[1][1] -5.6797 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][2] -5.6797 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 11.3593 _refine.B_iso_max 195.080 _refine.B_iso_mean 78.5943 _refine.B_iso_min 37.640 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5WZY _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.7990 _refine.ls_d_res_low 40.1010 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 20230 _refine.ls_number_reflns_R_free 2000 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.8000 _refine.ls_percent_reflns_R_free 9.8900 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2165 _refine.ls_R_factor_R_free 0.2486 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2130 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol 41.9320 _refine.solvent_model_param_ksol 0.2770 _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.0000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.7300 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 25.0700 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.7200 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.7990 _refine_hist.d_res_low 40.1010 _refine_hist.pdbx_number_atoms_ligand 127 _refine_hist.number_atoms_solvent 72 _refine_hist.number_atoms_total 2652 _refine_hist.pdbx_number_residues_total 324 _refine_hist.pdbx_B_iso_mean_ligand 85.87 _refine_hist.pdbx_B_iso_mean_solvent 61.99 _refine_hist.pdbx_number_atoms_protein 2453 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 ? 2645 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.568 ? 3613 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.100 ? 427 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 454 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 23.660 ? 976 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.7992 2.8691 1421 . 140 1281 99.0000 . . . 0.4355 0.0000 0.3952 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.8691 2.9467 1426 . 141 1285 100.0000 . . . 0.4205 0.0000 0.3418 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.9467 3.0334 1408 . 139 1269 100.0000 . . . 0.3310 0.0000 0.2881 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 3.0334 3.1312 1433 . 142 1291 100.0000 . . . 0.2904 0.0000 0.2490 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 3.1312 3.2431 1433 . 142 1291 100.0000 . . . 0.2718 0.0000 0.2308 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 3.2431 3.3729 1423 . 141 1282 100.0000 . . . 0.2979 0.0000 0.2310 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 3.3729 3.5263 1449 . 142 1307 100.0000 . . . 0.2439 0.0000 0.2118 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 3.5263 3.7121 1433 . 142 1291 100.0000 . . . 0.2479 0.0000 0.2009 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 3.7121 3.9445 1430 . 142 1288 100.0000 . . . 0.2401 0.0000 0.1811 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 3.9445 4.2487 1455 . 144 1311 100.0000 . . . 0.1827 0.0000 0.1721 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 4.2487 4.6757 1464 . 144 1320 100.0000 . . . 0.1772 0.0000 0.1373 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 4.6757 5.3509 1464 . 144 1320 100.0000 . . . 0.1653 0.0000 0.1470 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 5.3509 6.7364 1469 . 146 1323 100.0000 . . . 0.2572 0.0000 0.2019 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 6.7364 40.1056 1522 . 151 1371 98.0000 . . . 0.2899 0.0000 0.2761 . . . . . . 14 . . . # _struct.entry_id 5WZY _struct.title 'Crystal structure of the P2X4 receptor from zebrafish in the presence of CTP at 2.8 Angstroms' _struct.pdbx_descriptor 'p2X purinoceptor' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5WZY _struct_keywords.text 'membrane protein' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG A 11 ? TYR A 24 ? ARG A 36 TYR A 49 1 ? 14 HELX_P HELX_P2 AA2 ASP A 63 ? ILE A 68 ? ASP A 88 ILE A 93 1 ? 6 HELX_P HELX_P3 AA3 SER A 106 ? CYS A 110 ? SER A 131 CYS A 135 5 ? 5 HELX_P HELX_P4 AA4 LEU A 157 ? ARG A 162 ? LEU A 182 ARG A 187 5 ? 6 HELX_P HELX_P5 AA5 PRO A 174 ? ASN A 177 ? PRO A 199 ASN A 202 5 ? 4 HELX_P HELX_P6 AA6 ASN A 188 ? CYS A 195 ? ASN A 213 CYS A 220 1 ? 8 HELX_P HELX_P7 AA7 LEU A 210 ? ALA A 217 ? LEU A 235 ALA A 242 1 ? 8 HELX_P HELX_P8 AA8 ASP A 220 ? GLY A 228 ? ASP A 245 GLY A 253 1 ? 9 HELX_P HELX_P9 AA9 ASN A 309 ? ILE A 334 ? ASN A 334 ILE A 359 1 ? 26 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 94 SG ? ? ? 1_555 A CYS 143 SG ? ? A CYS 119 A CYS 168 1_555 ? ? ? ? ? ? ? 2.057 ? ? disulf2 disulf ? ? A CYS 104 SG ? ? ? 1_555 A CYS 127 SG ? ? A CYS 129 A CYS 152 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf3 disulf ? ? A CYS 110 SG ? ? ? 1_555 A CYS 137 SG ? ? A CYS 135 A CYS 162 1_555 ? ? ? ? ? ? ? 2.045 ? ? disulf4 disulf ? ? A CYS 195 SG ? ? ? 1_555 A CYS 205 SG ? ? A CYS 220 A CYS 230 1_555 ? ? ? ? ? ? ? 2.048 ? ? disulf5 disulf ? ? A CYS 239 SG ? ? ? 1_555 A CYS 248 SG ? ? A CYS 264 A CYS 273 1_555 ? ? ? ? ? ? ? 2.052 ? ? covale1 covale one ? A ASN 88 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 113 A NAG 507 1_555 ? ? ? ? ? ? ? 1.433 ? N-Glycosylation covale2 covale one ? A ASN 188 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 213 B NAG 1 1_555 ? ? ? ? ? ? ? 1.453 ? N-Glycosylation covale3 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.443 ? ? covale4 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.458 ? ? covale5 covale one ? B BMA . O3 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 4 1_555 ? ? ? ? ? ? ? 1.462 ? ? covale6 covale one ? B BMA . O6 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 6 1_555 ? ? ? ? ? ? ? 1.442 ? ? covale7 covale one ? B MAN . O3 ? ? ? 1_555 B MAN . C1 ? ? B MAN 4 B MAN 5 1_555 ? ? ? ? ? ? ? 1.448 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 55 A . ? SER 80 A GLU 56 A ? GLU 81 A 1 -10.75 2 ILE 69 A . ? ILE 94 A PRO 70 A ? PRO 95 A 1 -7.93 3 THR 124 A . ? THR 149 A GLY 125 A ? GLY 150 A 1 -27.07 4 CYS 143 A . ? CYS 168 A PRO 144 A ? PRO 169 A 1 4.45 5 ASN 153 A . ? ASN 178 A PRO 154 A ? PRO 179 A 1 5.85 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 3 ? AA3 ? 3 ? AA4 ? 2 ? AA5 ? 6 ? AA6 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? parallel AA5 5 6 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 33 ? THR A 37 ? GLN A 58 THR A 62 AA1 2 GLN A 304 ? PHE A 308 ? GLN A 329 PHE A 333 AA1 3 CYS A 239 ? ASP A 240 ? CYS A 264 ASP A 265 AA2 1 LEU A 39 ? LYS A 47 ? LEU A 64 LYS A 72 AA2 2 THR A 164 ? TYR A 173 ? THR A 189 TYR A 198 AA2 3 PHE A 178 ? ARG A 181 ? PHE A 203 ARG A 206 AA3 1 LEU A 39 ? LYS A 47 ? LEU A 64 LYS A 72 AA3 2 THR A 164 ? TYR A 173 ? THR A 189 TYR A 198 AA3 3 ILE A 207 ? ARG A 209 ? ILE A 232 ARG A 234 AA4 1 ALA A 50 ? THR A 54 ? ALA A 75 THR A 79 AA4 2 GLY A 58 ? TRP A 62 ? GLY A 83 TRP A 87 AA5 1 VAL A 122 ? SER A 129 ? VAL A 147 SER A 154 AA5 2 LYS A 135 ? CYS A 143 ? LYS A 160 CYS A 168 AA5 3 SER A 76 ? ALA A 95 ? SER A 101 ALA A 120 AA5 4 GLU A 285 ? PHE A 302 ? GLU A 310 PHE A 327 AA5 5 GLY A 229 ? ARG A 236 ? GLY A 254 ARG A 261 AA5 6 ARG A 251 ? ARG A 256 ? ARG A 276 ARG A 281 AA6 1 VAL A 122 ? SER A 129 ? VAL A 147 SER A 154 AA6 2 LYS A 135 ? CYS A 143 ? LYS A 160 CYS A 168 AA6 3 SER A 76 ? ALA A 95 ? SER A 101 ALA A 120 AA6 4 GLU A 285 ? PHE A 302 ? GLU A 310 PHE A 327 AA6 5 ASN A 271 ? LYS A 279 ? ASN A 296 LYS A 304 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASP A 36 ? N ASP A 61 O ALA A 305 ? O ALA A 330 AA1 2 3 O GLN A 304 ? O GLN A 329 N CYS A 239 ? N CYS A 264 AA2 1 2 N THR A 43 ? N THR A 68 O LYS A 168 ? O LYS A 193 AA2 2 3 N TYR A 173 ? N TYR A 198 O PHE A 178 ? O PHE A 203 AA3 1 2 N THR A 43 ? N THR A 68 O LYS A 168 ? O LYS A 193 AA3 2 3 N VAL A 165 ? N VAL A 190 O PHE A 208 ? O PHE A 233 AA4 1 2 N THR A 52 ? N THR A 77 O ARG A 60 ? O ARG A 85 AA5 1 2 N VAL A 122 ? N VAL A 147 O LEU A 140 ? O LEU A 165 AA5 2 3 O VAL A 139 ? O VAL A 164 N CYS A 94 ? N CYS A 119 AA5 3 4 N PHE A 77 ? N PHE A 102 O PHE A 297 ? O PHE A 322 AA5 4 5 O ASP A 298 ? O ASP A 323 N VAL A 233 ? N VAL A 258 AA5 5 6 N GLY A 232 ? N GLY A 257 O ARG A 255 ? O ARG A 280 AA6 1 2 N VAL A 122 ? N VAL A 147 O LEU A 140 ? O LEU A 165 AA6 2 3 O VAL A 139 ? O VAL A 164 N CYS A 94 ? N CYS A 119 AA6 3 4 N PHE A 77 ? N PHE A 102 O PHE A 297 ? O PHE A 322 AA6 4 5 O ILE A 290 ? O ILE A 315 N PHE A 274 ? N PHE A 299 # _atom_sites.entry_id 5WZY _atom_sites.fract_transf_matrix[1][1] 0.007737 _atom_sites.fract_transf_matrix[1][2] 0.004467 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008934 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003971 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 26 ? ? ? A . n A 1 2 SER 2 27 ? ? ? A . n A 1 3 SER 3 28 ? ? ? A . n A 1 4 LYS 4 29 ? ? ? A . n A 1 5 LYS 5 30 ? ? ? A . n A 1 6 VAL 6 31 ? ? ? A . n A 1 7 GLY 7 32 ? ? ? A . n A 1 8 THR 8 33 ? ? ? A . n A 1 9 LEU 9 34 ? ? ? A . n A 1 10 ASN 10 35 ? ? ? A . n A 1 11 ARG 11 36 36 ARG ARG A . n A 1 12 PHE 12 37 37 PHE PHE A . n A 1 13 THR 13 38 38 THR THR A . n A 1 14 GLN 14 39 39 GLN GLN A . n A 1 15 ALA 15 40 40 ALA ALA A . n A 1 16 LEU 16 41 41 LEU LEU A . n A 1 17 VAL 17 42 42 VAL VAL A . n A 1 18 ILE 18 43 43 ILE ILE A . n A 1 19 ALA 19 44 44 ALA ALA A . n A 1 20 TYR 20 45 45 TYR TYR A . n A 1 21 VAL 21 46 46 VAL VAL A . n A 1 22 ILE 22 47 47 ILE ILE A . n A 1 23 GLY 23 48 48 GLY GLY A . n A 1 24 TYR 24 49 49 TYR TYR A . n A 1 25 VAL 25 50 50 VAL VAL A . n A 1 26 CYS 26 51 51 CYS CYS A . n A 1 27 VAL 27 52 52 VAL VAL A . n A 1 28 TYR 28 53 53 TYR TYR A . n A 1 29 ASN 29 54 54 ASN ASN A . n A 1 30 LYS 30 55 55 LYS LYS A . n A 1 31 GLY 31 56 56 GLY GLY A . n A 1 32 TYR 32 57 57 TYR TYR A . n A 1 33 GLN 33 58 58 GLN GLN A . n A 1 34 ASP 34 59 59 ASP ASP A . n A 1 35 THR 35 60 60 THR THR A . n A 1 36 ASP 36 61 61 ASP ASP A . n A 1 37 THR 37 62 62 THR THR A . n A 1 38 VAL 38 63 63 VAL VAL A . n A 1 39 LEU 39 64 64 LEU LEU A . n A 1 40 SER 40 65 65 SER SER A . n A 1 41 SER 41 66 66 SER SER A . n A 1 42 VAL 42 67 67 VAL VAL A . n A 1 43 THR 43 68 68 THR THR A . n A 1 44 THR 44 69 69 THR THR A . n A 1 45 LYS 45 70 70 LYS LYS A . n A 1 46 VAL 46 71 71 VAL VAL A . n A 1 47 LYS 47 72 72 LYS LYS A . n A 1 48 GLY 48 73 73 GLY GLY A . n A 1 49 ILE 49 74 74 ILE ILE A . n A 1 50 ALA 50 75 75 ALA ALA A . n A 1 51 LEU 51 76 76 LEU LEU A . n A 1 52 THR 52 77 77 THR THR A . n A 1 53 LYS 53 78 78 LYS LYS A . n A 1 54 THR 54 79 79 THR THR A . n A 1 55 SER 55 80 80 SER SER A . n A 1 56 GLU 56 81 81 GLU GLU A . n A 1 57 LEU 57 82 82 LEU LEU A . n A 1 58 GLY 58 83 83 GLY GLY A . n A 1 59 GLU 59 84 84 GLU GLU A . n A 1 60 ARG 60 85 85 ARG ARG A . n A 1 61 ILE 61 86 86 ILE ILE A . n A 1 62 TRP 62 87 87 TRP TRP A . n A 1 63 ASP 63 88 88 ASP ASP A . n A 1 64 VAL 64 89 89 VAL VAL A . n A 1 65 ALA 65 90 90 ALA ALA A . n A 1 66 ASP 66 91 91 ASP ASP A . n A 1 67 TYR 67 92 92 TYR TYR A . n A 1 68 ILE 68 93 93 ILE ILE A . n A 1 69 ILE 69 94 94 ILE ILE A . n A 1 70 PRO 70 95 95 PRO PRO A . n A 1 71 PRO 71 96 96 PRO PRO A . n A 1 72 GLN 72 97 97 GLN GLN A . n A 1 73 GLU 73 98 98 GLU GLU A . n A 1 74 ASP 74 99 99 ASP ASP A . n A 1 75 GLY 75 100 100 GLY GLY A . n A 1 76 SER 76 101 101 SER SER A . n A 1 77 PHE 77 102 102 PHE PHE A . n A 1 78 PHE 78 103 103 PHE PHE A . n A 1 79 VAL 79 104 104 VAL VAL A . n A 1 80 LEU 80 105 105 LEU LEU A . n A 1 81 THR 81 106 106 THR THR A . n A 1 82 ASN 82 107 107 ASN ASN A . n A 1 83 MET 83 108 108 MET MET A . n A 1 84 ILE 84 109 109 ILE ILE A . n A 1 85 ILE 85 110 110 ILE ILE A . n A 1 86 THR 86 111 111 THR THR A . n A 1 87 THR 87 112 112 THR THR A . n A 1 88 ASN 88 113 113 ASN ASN A . n A 1 89 GLN 89 114 114 GLN GLN A . n A 1 90 THR 90 115 115 THR THR A . n A 1 91 GLN 91 116 116 GLN GLN A . n A 1 92 SER 92 117 117 SER SER A . n A 1 93 LYS 93 118 118 LYS LYS A . n A 1 94 CYS 94 119 119 CYS CYS A . n A 1 95 ALA 95 120 120 ALA ALA A . n A 1 96 GLU 96 121 121 GLU GLU A . n A 1 97 ASN 97 122 122 ASN ASN A . n A 1 98 PRO 98 123 123 PRO PRO A . n A 1 99 THR 99 124 124 THR THR A . n A 1 100 PRO 100 125 125 PRO PRO A . n A 1 101 ALA 101 126 126 ALA ALA A . n A 1 102 SER 102 127 127 SER SER A . n A 1 103 THR 103 128 128 THR THR A . n A 1 104 CYS 104 129 129 CYS CYS A . n A 1 105 THR 105 130 130 THR THR A . n A 1 106 SER 106 131 131 SER SER A . n A 1 107 HIS 107 132 132 HIS HIS A . n A 1 108 ARG 108 133 133 ARG ARG A . n A 1 109 ASP 109 134 134 ASP ASP A . n A 1 110 CYS 110 135 135 CYS CYS A . n A 1 111 LYS 111 136 136 LYS LYS A . n A 1 112 ARG 112 137 137 ARG ARG A . n A 1 113 GLY 113 138 138 GLY GLY A . n A 1 114 PHE 114 139 139 PHE PHE A . n A 1 115 ASN 115 140 140 ASN ASN A . n A 1 116 ASP 116 141 141 ASP ASP A . n A 1 117 ALA 117 142 142 ALA ALA A . n A 1 118 ARG 118 143 143 ARG ARG A . n A 1 119 GLY 119 144 144 GLY GLY A . n A 1 120 ASP 120 145 145 ASP ASP A . n A 1 121 GLY 121 146 146 GLY GLY A . n A 1 122 VAL 122 147 147 VAL VAL A . n A 1 123 ARG 123 148 148 ARG ARG A . n A 1 124 THR 124 149 149 THR THR A . n A 1 125 GLY 125 150 150 GLY GLY A . n A 1 126 ARG 126 151 151 ARG ARG A . n A 1 127 CYS 127 152 152 CYS CYS A . n A 1 128 VAL 128 153 153 VAL VAL A . n A 1 129 SER 129 154 154 SER SER A . n A 1 130 TYR 130 155 155 TYR TYR A . n A 1 131 SER 131 156 156 SER SER A . n A 1 132 ALA 132 157 157 ALA ALA A . n A 1 133 SER 133 158 158 SER SER A . n A 1 134 VAL 134 159 159 VAL VAL A . n A 1 135 LYS 135 160 160 LYS LYS A . n A 1 136 THR 136 161 161 THR THR A . n A 1 137 CYS 137 162 162 CYS CYS A . n A 1 138 GLU 138 163 163 GLU GLU A . n A 1 139 VAL 139 164 164 VAL VAL A . n A 1 140 LEU 140 165 165 LEU LEU A . n A 1 141 SER 141 166 166 SER SER A . n A 1 142 TRP 142 167 167 TRP TRP A . n A 1 143 CYS 143 168 168 CYS CYS A . n A 1 144 PRO 144 169 169 PRO PRO A . n A 1 145 LEU 145 170 170 LEU LEU A . n A 1 146 GLU 146 171 171 GLU GLU A . n A 1 147 LYS 147 172 172 LYS LYS A . n A 1 148 ILE 148 173 173 ILE ILE A . n A 1 149 VAL 149 174 174 VAL VAL A . n A 1 150 ASP 150 175 175 ASP ASP A . n A 1 151 PRO 151 176 176 PRO PRO A . n A 1 152 PRO 152 177 177 PRO PRO A . n A 1 153 ASN 153 178 178 ASN ASN A . n A 1 154 PRO 154 179 179 PRO PRO A . n A 1 155 PRO 155 180 180 PRO PRO A . n A 1 156 LEU 156 181 181 LEU LEU A . n A 1 157 LEU 157 182 182 LEU LEU A . n A 1 158 ALA 158 183 183 ALA ALA A . n A 1 159 ASP 159 184 184 ASP ASP A . n A 1 160 ALA 160 185 185 ALA ALA A . n A 1 161 GLU 161 186 186 GLU GLU A . n A 1 162 ARG 162 187 187 ARG ARG A . n A 1 163 PHE 163 188 188 PHE PHE A . n A 1 164 THR 164 189 189 THR THR A . n A 1 165 VAL 165 190 190 VAL VAL A . n A 1 166 LEU 166 191 191 LEU LEU A . n A 1 167 ILE 167 192 192 ILE ILE A . n A 1 168 LYS 168 193 193 LYS LYS A . n A 1 169 ASN 169 194 194 ASN ASN A . n A 1 170 ASN 170 195 195 ASN ASN A . n A 1 171 ILE 171 196 196 ILE ILE A . n A 1 172 ARG 172 197 197 ARG ARG A . n A 1 173 TYR 173 198 198 TYR TYR A . n A 1 174 PRO 174 199 199 PRO PRO A . n A 1 175 LYS 175 200 200 LYS LYS A . n A 1 176 PHE 176 201 201 PHE PHE A . n A 1 177 ASN 177 202 202 ASN ASN A . n A 1 178 PHE 178 203 203 PHE PHE A . n A 1 179 ASN 179 204 204 ASN ASN A . n A 1 180 LYS 180 205 205 LYS LYS A . n A 1 181 ARG 181 206 206 ARG ARG A . n A 1 182 ASN 182 207 207 ASN ASN A . n A 1 183 ILE 183 208 208 ILE ILE A . n A 1 184 LEU 184 209 209 LEU LEU A . n A 1 185 PRO 185 210 210 PRO PRO A . n A 1 186 ASN 186 211 211 ASN ASN A . n A 1 187 ILE 187 212 212 ILE ILE A . n A 1 188 ASN 188 213 213 ASN ASN A . n A 1 189 SER 189 214 214 SER SER A . n A 1 190 SER 190 215 215 SER SER A . n A 1 191 TYR 191 216 216 TYR TYR A . n A 1 192 LEU 192 217 217 LEU LEU A . n A 1 193 THR 193 218 218 THR THR A . n A 1 194 HIS 194 219 219 HIS HIS A . n A 1 195 CYS 195 220 220 CYS CYS A . n A 1 196 VAL 196 221 221 VAL VAL A . n A 1 197 PHE 197 222 222 PHE PHE A . n A 1 198 SER 198 223 223 SER SER A . n A 1 199 ARG 199 224 224 ARG ARG A . n A 1 200 LYS 200 225 225 LYS LYS A . n A 1 201 THR 201 226 226 THR THR A . n A 1 202 ASP 202 227 227 ASP ASP A . n A 1 203 PRO 203 228 228 PRO PRO A . n A 1 204 ASP 204 229 229 ASP ASP A . n A 1 205 CYS 205 230 230 CYS CYS A . n A 1 206 PRO 206 231 231 PRO PRO A . n A 1 207 ILE 207 232 232 ILE ILE A . n A 1 208 PHE 208 233 233 PHE PHE A . n A 1 209 ARG 209 234 234 ARG ARG A . n A 1 210 LEU 210 235 235 LEU LEU A . n A 1 211 GLY 211 236 236 GLY GLY A . n A 1 212 ASP 212 237 237 ASP ASP A . n A 1 213 ILE 213 238 238 ILE ILE A . n A 1 214 VAL 214 239 239 VAL VAL A . n A 1 215 GLY 215 240 240 GLY GLY A . n A 1 216 GLU 216 241 241 GLU GLU A . n A 1 217 ALA 217 242 242 ALA ALA A . n A 1 218 GLU 218 243 243 GLU GLU A . n A 1 219 GLU 219 244 244 GLU GLU A . n A 1 220 ASP 220 245 245 ASP ASP A . n A 1 221 PHE 221 246 246 PHE PHE A . n A 1 222 GLN 222 247 247 GLN GLN A . n A 1 223 ILE 223 248 248 ILE ILE A . n A 1 224 MET 224 249 249 MET MET A . n A 1 225 ALA 225 250 250 ALA ALA A . n A 1 226 VAL 226 251 251 VAL VAL A . n A 1 227 ARG 227 252 252 ARG ARG A . n A 1 228 GLY 228 253 253 GLY GLY A . n A 1 229 GLY 229 254 254 GLY GLY A . n A 1 230 VAL 230 255 255 VAL VAL A . n A 1 231 MET 231 256 256 MET MET A . n A 1 232 GLY 232 257 257 GLY GLY A . n A 1 233 VAL 233 258 258 VAL VAL A . n A 1 234 GLN 234 259 259 GLN GLN A . n A 1 235 ILE 235 260 260 ILE ILE A . n A 1 236 ARG 236 261 261 ARG ARG A . n A 1 237 TRP 237 262 262 TRP TRP A . n A 1 238 ASP 238 263 263 ASP ASP A . n A 1 239 CYS 239 264 264 CYS CYS A . n A 1 240 ASP 240 265 265 ASP ASP A . n A 1 241 LEU 241 266 266 LEU LEU A . n A 1 242 ASP 242 267 267 ASP ASP A . n A 1 243 MET 243 268 268 MET MET A . n A 1 244 PRO 244 269 269 PRO PRO A . n A 1 245 GLN 245 270 270 GLN GLN A . n A 1 246 SER 246 271 271 SER SER A . n A 1 247 TRP 247 272 272 TRP TRP A . n A 1 248 CYS 248 273 273 CYS CYS A . n A 1 249 VAL 249 274 274 VAL VAL A . n A 1 250 PRO 250 275 275 PRO PRO A . n A 1 251 ARG 251 276 276 ARG ARG A . n A 1 252 TYR 252 277 277 TYR TYR A . n A 1 253 THR 253 278 278 THR THR A . n A 1 254 PHE 254 279 279 PHE PHE A . n A 1 255 ARG 255 280 280 ARG ARG A . n A 1 256 ARG 256 281 281 ARG ARG A . n A 1 257 LEU 257 282 282 LEU LEU A . n A 1 258 ASP 258 283 283 ASP ASP A . n A 1 259 ASN 259 284 284 ASN ASN A . n A 1 260 LYS 260 285 285 LYS LYS A . n A 1 261 ASP 261 286 286 ASP ASP A . n A 1 262 PRO 262 287 287 PRO PRO A . n A 1 263 ASP 263 288 288 ASP ASP A . n A 1 264 ASN 264 289 289 ASN ASN A . n A 1 265 ASN 265 290 290 ASN ASN A . n A 1 266 VAL 266 291 291 VAL VAL A . n A 1 267 ALA 267 292 292 ALA ALA A . n A 1 268 PRO 268 293 293 PRO PRO A . n A 1 269 GLY 269 294 294 GLY GLY A . n A 1 270 TYR 270 295 295 TYR TYR A . n A 1 271 ASN 271 296 296 ASN ASN A . n A 1 272 PHE 272 297 297 PHE PHE A . n A 1 273 ARG 273 298 298 ARG ARG A . n A 1 274 PHE 274 299 299 PHE PHE A . n A 1 275 ALA 275 300 300 ALA ALA A . n A 1 276 LYS 276 301 301 LYS LYS A . n A 1 277 TYR 277 302 302 TYR TYR A . n A 1 278 TYR 278 303 303 TYR TYR A . n A 1 279 LYS 279 304 304 LYS LYS A . n A 1 280 ASN 280 305 305 ASN ASN A . n A 1 281 SER 281 306 306 SER SER A . n A 1 282 ASP 282 307 307 ASP ASP A . n A 1 283 GLY 283 308 308 GLY GLY A . n A 1 284 THR 284 309 309 THR THR A . n A 1 285 GLU 285 310 310 GLU GLU A . n A 1 286 THR 286 311 311 THR THR A . n A 1 287 ARG 287 312 312 ARG ARG A . n A 1 288 THR 288 313 313 THR THR A . n A 1 289 LEU 289 314 314 LEU LEU A . n A 1 290 ILE 290 315 315 ILE ILE A . n A 1 291 LYS 291 316 316 LYS LYS A . n A 1 292 GLY 292 317 317 GLY GLY A . n A 1 293 TYR 293 318 318 TYR TYR A . n A 1 294 GLY 294 319 319 GLY GLY A . n A 1 295 ILE 295 320 320 ILE ILE A . n A 1 296 ARG 296 321 321 ARG ARG A . n A 1 297 PHE 297 322 322 PHE PHE A . n A 1 298 ASP 298 323 323 ASP ASP A . n A 1 299 VAL 299 324 324 VAL VAL A . n A 1 300 MET 300 325 325 MET MET A . n A 1 301 VAL 301 326 326 VAL VAL A . n A 1 302 PHE 302 327 327 PHE PHE A . n A 1 303 GLY 303 328 328 GLY GLY A . n A 1 304 GLN 304 329 329 GLN GLN A . n A 1 305 ALA 305 330 330 ALA ALA A . n A 1 306 GLY 306 331 331 GLY GLY A . n A 1 307 LYS 307 332 332 LYS LYS A . n A 1 308 PHE 308 333 333 PHE PHE A . n A 1 309 ASN 309 334 334 ASN ASN A . n A 1 310 ILE 310 335 335 ILE ILE A . n A 1 311 ILE 311 336 336 ILE ILE A . n A 1 312 PRO 312 337 337 PRO PRO A . n A 1 313 THR 313 338 338 THR THR A . n A 1 314 LEU 314 339 339 LEU LEU A . n A 1 315 LEU 315 340 340 LEU LEU A . n A 1 316 ASN 316 341 341 ASN ASN A . n A 1 317 ILE 317 342 342 ILE ILE A . n A 1 318 GLY 318 343 343 GLY GLY A . n A 1 319 ALA 319 344 344 ALA ALA A . n A 1 320 GLY 320 345 345 GLY GLY A . n A 1 321 LEU 321 346 346 LEU LEU A . n A 1 322 ALA 322 347 347 ALA ALA A . n A 1 323 LEU 323 348 348 LEU LEU A . n A 1 324 LEU 324 349 349 LEU LEU A . n A 1 325 GLY 325 350 350 GLY GLY A . n A 1 326 LEU 326 351 351 LEU LEU A . n A 1 327 VAL 327 352 352 VAL VAL A . n A 1 328 ASN 328 353 353 ASN ASN A . n A 1 329 VAL 329 354 354 VAL VAL A . n A 1 330 ILE 330 355 355 ILE ILE A . n A 1 331 CYS 331 356 356 CYS CYS A . n A 1 332 ASP 332 357 357 ASP ASP A . n A 1 333 TRP 333 358 358 TRP TRP A . n A 1 334 ILE 334 359 359 ILE ILE A . n A 1 335 VAL 335 360 ? ? ? A . n A 1 336 LEU 336 361 ? ? ? A . n A 1 337 THR 337 362 ? ? ? A . n A 1 338 PHE 338 363 ? ? ? A . n A 1 339 MET 339 364 ? ? ? A . n A 1 340 LYS 340 365 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG 1 507 507 NAG NAG A . D 4 GOL 1 508 509 GOL GOL A . E 4 GOL 1 509 510 GOL GOL A . F 5 CTP 1 510 1 CTP CTP A . G 6 HOH 1 601 29 HOH HOH A . G 6 HOH 2 602 39 HOH HOH A . G 6 HOH 3 603 56 HOH HOH A . G 6 HOH 4 604 69 HOH HOH A . G 6 HOH 5 605 16 HOH HOH A . G 6 HOH 6 606 3 HOH HOH A . G 6 HOH 7 607 38 HOH HOH A . G 6 HOH 8 608 41 HOH HOH A . G 6 HOH 9 609 59 HOH HOH A . G 6 HOH 10 610 71 HOH HOH A . G 6 HOH 11 611 9 HOH HOH A . G 6 HOH 12 612 70 HOH HOH A . G 6 HOH 13 613 62 HOH HOH A . G 6 HOH 14 614 26 HOH HOH A . G 6 HOH 15 615 45 HOH HOH A . G 6 HOH 16 616 7 HOH HOH A . G 6 HOH 17 617 60 HOH HOH A . G 6 HOH 18 618 53 HOH HOH A . G 6 HOH 19 619 65 HOH HOH A . G 6 HOH 20 620 18 HOH HOH A . G 6 HOH 21 621 28 HOH HOH A . G 6 HOH 22 622 57 HOH HOH A . G 6 HOH 23 623 21 HOH HOH A . G 6 HOH 24 624 52 HOH HOH A . G 6 HOH 25 625 63 HOH HOH A . G 6 HOH 26 626 12 HOH HOH A . G 6 HOH 27 627 4 HOH HOH A . G 6 HOH 28 628 27 HOH HOH A . G 6 HOH 29 629 5 HOH HOH A . G 6 HOH 30 630 35 HOH HOH A . G 6 HOH 31 631 33 HOH HOH A . G 6 HOH 32 632 11 HOH HOH A . G 6 HOH 33 633 58 HOH HOH A . G 6 HOH 34 634 23 HOH HOH A . G 6 HOH 35 635 6 HOH HOH A . G 6 HOH 36 636 32 HOH HOH A . G 6 HOH 37 637 14 HOH HOH A . G 6 HOH 38 638 64 HOH HOH A . G 6 HOH 39 639 25 HOH HOH A . G 6 HOH 40 640 13 HOH HOH A . G 6 HOH 41 641 68 HOH HOH A . G 6 HOH 42 642 43 HOH HOH A . G 6 HOH 43 643 49 HOH HOH A . G 6 HOH 44 644 54 HOH HOH A . G 6 HOH 45 645 55 HOH HOH A . G 6 HOH 46 646 36 HOH HOH A . G 6 HOH 47 647 34 HOH HOH A . G 6 HOH 48 648 48 HOH HOH A . G 6 HOH 49 649 22 HOH HOH A . G 6 HOH 50 650 8 HOH HOH A . G 6 HOH 51 651 30 HOH HOH A . G 6 HOH 52 652 20 HOH HOH A . G 6 HOH 53 653 17 HOH HOH A . G 6 HOH 54 654 2 HOH HOH A . G 6 HOH 55 655 67 HOH HOH A . G 6 HOH 56 656 37 HOH HOH A . G 6 HOH 57 657 66 HOH HOH A . G 6 HOH 58 658 10 HOH HOH A . G 6 HOH 59 659 15 HOH HOH A . G 6 HOH 60 660 42 HOH HOH A . G 6 HOH 61 661 72 HOH HOH A . G 6 HOH 62 662 61 HOH HOH A . G 6 HOH 63 663 19 HOH HOH A . G 6 HOH 64 664 46 HOH HOH A . G 6 HOH 65 665 40 HOH HOH A . G 6 HOH 66 666 47 HOH HOH A . G 6 HOH 67 667 51 HOH HOH A . G 6 HOH 68 668 50 HOH HOH A . G 6 HOH 69 669 31 HOH HOH A . G 6 HOH 70 670 1 HOH HOH A . G 6 HOH 71 671 24 HOH HOH A . G 6 HOH 72 672 44 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 19250 ? 1 MORE 43 ? 1 'SSA (A^2)' 45100 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5000000000 -0.8660254038 0.0000000000 64.6210000000 0.8660254038 -0.5000000000 0.0000000000 -111.9268552359 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5000000000 0.8660254038 0.0000000000 129.2420000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 652 ? G HOH . 2 1 A HOH 670 ? G HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-04-05 2 'Structure model' 1 1 2020-02-26 3 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp 2 2 'Structure model' diffrn_source 3 3 'Structure model' atom_site 4 3 'Structure model' chem_comp 5 3 'Structure model' entity 6 3 'Structure model' pdbx_branch_scheme 7 3 'Structure model' pdbx_chem_comp_identifier 8 3 'Structure model' pdbx_entity_branch 9 3 'Structure model' pdbx_entity_branch_descriptor 10 3 'Structure model' pdbx_entity_branch_link 11 3 'Structure model' pdbx_entity_branch_list 12 3 'Structure model' pdbx_entity_nonpoly 13 3 'Structure model' pdbx_nonpoly_scheme 14 3 'Structure model' pdbx_struct_assembly_gen 15 3 'Structure model' pdbx_struct_special_symmetry 16 3 'Structure model' struct_asym 17 3 'Structure model' struct_conn 18 3 'Structure model' struct_site 19 3 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_chem_comp.type' 2 2 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 3 3 'Structure model' '_atom_site.B_iso_or_equiv' 4 3 'Structure model' '_atom_site.Cartn_x' 5 3 'Structure model' '_atom_site.Cartn_y' 6 3 'Structure model' '_atom_site.Cartn_z' 7 3 'Structure model' '_atom_site.auth_asym_id' 8 3 'Structure model' '_atom_site.auth_seq_id' 9 3 'Structure model' '_atom_site.label_asym_id' 10 3 'Structure model' '_atom_site.label_entity_id' 11 3 'Structure model' '_chem_comp.name' 12 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 13 3 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id' 14 3 'Structure model' '_struct_conn.pdbx_role' 15 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 16 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 17 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 18 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 19 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 20 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.7.2_869 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL ? ? ? . 6 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 ND2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 113 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 C2 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 NAG _pdbx_validate_close_contact.auth_seq_id_2 507 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.92 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 47 ? ? -103.77 -61.36 2 1 TYR A 49 ? ? -61.50 -71.79 3 1 VAL A 52 ? ? -92.93 -61.46 4 1 SER A 117 ? ? -170.90 -178.37 5 1 LYS A 225 ? ? -74.23 -71.82 6 1 PRO A 231 ? ? -90.84 43.37 7 1 TRP A 272 ? ? -75.03 -167.62 8 1 CYS A 273 ? ? 63.39 68.59 9 1 ASP A 286 ? ? -117.17 74.75 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 36 ? CG ? A ARG 11 CG 2 1 Y 1 A ARG 36 ? CD ? A ARG 11 CD 3 1 Y 1 A ARG 36 ? NE ? A ARG 11 NE 4 1 Y 1 A ARG 36 ? CZ ? A ARG 11 CZ 5 1 Y 1 A ARG 36 ? NH1 ? A ARG 11 NH1 6 1 Y 1 A ARG 36 ? NH2 ? A ARG 11 NH2 7 1 Y 1 A PHE 37 ? CG ? A PHE 12 CG 8 1 Y 1 A PHE 37 ? CD1 ? A PHE 12 CD1 9 1 Y 1 A PHE 37 ? CD2 ? A PHE 12 CD2 10 1 Y 1 A PHE 37 ? CE1 ? A PHE 12 CE1 11 1 Y 1 A PHE 37 ? CE2 ? A PHE 12 CE2 12 1 Y 1 A PHE 37 ? CZ ? A PHE 12 CZ 13 1 Y 1 A TYR 49 ? CG ? A TYR 24 CG 14 1 Y 1 A TYR 49 ? CD1 ? A TYR 24 CD1 15 1 Y 1 A TYR 49 ? CD2 ? A TYR 24 CD2 16 1 Y 1 A TYR 49 ? CE1 ? A TYR 24 CE1 17 1 Y 1 A TYR 49 ? CE2 ? A TYR 24 CE2 18 1 Y 1 A TYR 49 ? CZ ? A TYR 24 CZ 19 1 Y 1 A TYR 49 ? OH ? A TYR 24 OH 20 1 Y 1 A ASN 54 ? CG ? A ASN 29 CG 21 1 Y 1 A ASN 54 ? OD1 ? A ASN 29 OD1 22 1 Y 1 A ASN 54 ? ND2 ? A ASN 29 ND2 23 1 Y 1 A LYS 55 ? CG ? A LYS 30 CG 24 1 Y 1 A LYS 55 ? CD ? A LYS 30 CD 25 1 Y 1 A LYS 55 ? CE ? A LYS 30 CE 26 1 Y 1 A LYS 55 ? NZ ? A LYS 30 NZ 27 1 Y 1 A LYS 78 ? CG ? A LYS 53 CG 28 1 Y 1 A LYS 78 ? CD ? A LYS 53 CD 29 1 Y 1 A LYS 78 ? CE ? A LYS 53 CE 30 1 Y 1 A LYS 78 ? NZ ? A LYS 53 NZ 31 1 Y 1 A THR 79 ? OG1 ? A THR 54 OG1 32 1 Y 1 A THR 79 ? CG2 ? A THR 54 CG2 33 1 Y 1 A SER 80 ? OG ? A SER 55 OG 34 1 Y 1 A LEU 82 ? CG ? A LEU 57 CG 35 1 Y 1 A LEU 82 ? CD1 ? A LEU 57 CD1 36 1 Y 1 A LEU 82 ? CD2 ? A LEU 57 CD2 37 1 Y 1 A LYS 136 ? CG ? A LYS 111 CG 38 1 Y 1 A LYS 136 ? CD ? A LYS 111 CD 39 1 Y 1 A LYS 136 ? CE ? A LYS 111 CE 40 1 Y 1 A LYS 136 ? NZ ? A LYS 111 NZ 41 1 Y 1 A ARG 151 ? CZ ? A ARG 126 CZ 42 1 Y 1 A ARG 151 ? NH1 ? A ARG 126 NH1 43 1 Y 1 A ARG 151 ? NH2 ? A ARG 126 NH2 44 1 Y 1 A LYS 172 ? CG ? A LYS 147 CG 45 1 Y 1 A LYS 172 ? CD ? A LYS 147 CD 46 1 Y 1 A LYS 172 ? CE ? A LYS 147 CE 47 1 Y 1 A LYS 172 ? NZ ? A LYS 147 NZ 48 1 Y 1 A ARG 187 ? CZ ? A ARG 162 CZ 49 1 Y 1 A ARG 187 ? NH1 ? A ARG 162 NH1 50 1 Y 1 A ARG 187 ? NH2 ? A ARG 162 NH2 51 1 Y 1 A ASN 202 ? CG ? A ASN 177 CG 52 1 Y 1 A ASN 202 ? OD1 ? A ASN 177 OD1 53 1 Y 1 A ASN 202 ? ND2 ? A ASN 177 ND2 54 1 Y 1 A LYS 225 ? CG ? A LYS 200 CG 55 1 Y 1 A LYS 225 ? CD ? A LYS 200 CD 56 1 Y 1 A LYS 225 ? CE ? A LYS 200 CE 57 1 Y 1 A LYS 225 ? NZ ? A LYS 200 NZ 58 1 Y 1 A ARG 280 ? CG ? A ARG 255 CG 59 1 Y 1 A ARG 280 ? CD ? A ARG 255 CD 60 1 Y 1 A ARG 280 ? NE ? A ARG 255 NE 61 1 Y 1 A ARG 280 ? CZ ? A ARG 255 CZ 62 1 Y 1 A ARG 280 ? NH1 ? A ARG 255 NH1 63 1 Y 1 A ARG 280 ? NH2 ? A ARG 255 NH2 64 1 Y 1 A LYS 285 ? CG ? A LYS 260 CG 65 1 Y 1 A LYS 285 ? CD ? A LYS 260 CD 66 1 Y 1 A LYS 285 ? CE ? A LYS 260 CE 67 1 Y 1 A LYS 285 ? NZ ? A LYS 260 NZ 68 1 Y 1 A ASP 286 ? CG ? A ASP 261 CG 69 1 Y 1 A ASP 286 ? OD1 ? A ASP 261 OD1 70 1 Y 1 A ASP 286 ? OD2 ? A ASP 261 OD2 71 1 Y 1 A ASN 290 ? CG ? A ASN 265 CG 72 1 Y 1 A ASN 290 ? OD1 ? A ASN 265 OD1 73 1 Y 1 A ASN 290 ? ND2 ? A ASN 265 ND2 74 1 Y 1 A ASP 307 ? CG ? A ASP 282 CG 75 1 Y 1 A ASP 307 ? OD1 ? A ASP 282 OD1 76 1 Y 1 A ASP 307 ? OD2 ? A ASP 282 OD2 77 1 Y 1 A LYS 332 ? CG ? A LYS 307 CG 78 1 Y 1 A LYS 332 ? CD ? A LYS 307 CD 79 1 Y 1 A LYS 332 ? CE ? A LYS 307 CE 80 1 Y 1 A LYS 332 ? NZ ? A LYS 307 NZ 81 1 Y 1 A LEU 348 ? CG ? A LEU 323 CG 82 1 Y 1 A LEU 348 ? CD1 ? A LEU 323 CD1 83 1 Y 1 A LEU 348 ? CD2 ? A LEU 323 CD2 84 1 Y 1 A LEU 349 ? CG ? A LEU 324 CG 85 1 Y 1 A LEU 349 ? CD1 ? A LEU 324 CD1 86 1 Y 1 A LEU 349 ? CD2 ? A LEU 324 CD2 87 1 Y 1 A VAL 352 ? CG1 ? A VAL 327 CG1 88 1 Y 1 A VAL 352 ? CG2 ? A VAL 327 CG2 89 1 Y 1 A VAL 354 ? CG1 ? A VAL 329 CG1 90 1 Y 1 A VAL 354 ? CG2 ? A VAL 329 CG2 91 1 Y 1 A CYS 356 ? SG ? A CYS 331 SG 92 1 Y 1 A TRP 358 ? CG ? A TRP 333 CG 93 1 Y 1 A TRP 358 ? CD1 ? A TRP 333 CD1 94 1 Y 1 A TRP 358 ? CD2 ? A TRP 333 CD2 95 1 Y 1 A TRP 358 ? NE1 ? A TRP 333 NE1 96 1 Y 1 A TRP 358 ? CE2 ? A TRP 333 CE2 97 1 Y 1 A TRP 358 ? CE3 ? A TRP 333 CE3 98 1 Y 1 A TRP 358 ? CZ2 ? A TRP 333 CZ2 99 1 Y 1 A TRP 358 ? CZ3 ? A TRP 333 CZ3 100 1 Y 1 A TRP 358 ? CH2 ? A TRP 333 CH2 101 1 Y 1 A ILE 359 ? CG1 ? A ILE 334 CG1 102 1 Y 1 A ILE 359 ? CG2 ? A ILE 334 CG2 103 1 Y 1 A ILE 359 ? CD1 ? A ILE 334 CD1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 26 ? A GLY 1 2 1 Y 1 A SER 27 ? A SER 2 3 1 Y 1 A SER 28 ? A SER 3 4 1 Y 1 A LYS 29 ? A LYS 4 5 1 Y 1 A LYS 30 ? A LYS 5 6 1 Y 1 A VAL 31 ? A VAL 6 7 1 Y 1 A GLY 32 ? A GLY 7 8 1 Y 1 A THR 33 ? A THR 8 9 1 Y 1 A LEU 34 ? A LEU 9 10 1 Y 1 A ASN 35 ? A ASN 10 11 1 Y 1 A VAL 360 ? A VAL 335 12 1 Y 1 A LEU 361 ? A LEU 336 13 1 Y 1 A THR 362 ? A THR 337 14 1 Y 1 A PHE 363 ? A PHE 338 15 1 Y 1 A MET 364 ? A MET 339 16 1 Y 1 A LYS 365 ? A LYS 340 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science' Japan 24227004 1 'National Natural Science Foundation of China' China 31650110469 2 'National Natural Science Foundation of China' China 31570838 3 'Ministry of Science and Technology of China' China 2016YFA0502800 4 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 501 n B 2 NAG 2 B NAG 2 A NAG 502 n B 2 BMA 3 B BMA 3 A BMA 503 n B 2 MAN 4 B MAN 4 A MAN 505 n B 2 MAN 5 B MAN 5 A MAN 506 n B 2 MAN 6 B MAN 6 A MAN 504 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'DManpa1-3DManpa1-3[DManpa1-6]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,6,5/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-3-3/a4-b1_b4-c1_c3-d1_c6-f1_d3-e1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{[(3+1)][a-D-Manp]{}}[(6+1)][a-D-Manp]{}}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 2 4 MAN C1 O1 3 BMA O3 HO3 sing ? 4 2 5 MAN C1 O1 4 MAN O3 HO3 sing ? 5 2 6 MAN C1 O1 3 BMA O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 2 MAN 4 n 2 MAN 5 n 2 MAN 6 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 4 GLYCEROL GOL 5 "CYTIDINE-5'-TRIPHOSPHATE" CTP 6 water HOH #