data_5Y8Y # _entry.id 5Y8Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5Y8Y pdb_00005y8y 10.2210/pdb5y8y/pdb WWPDB D_1300004850 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-06-13 2 'Structure model' 1 1 2019-12-04 3 'Structure model' 1 2 2024-03-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' reflns_shell 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5Y8Y _pdbx_database_status.recvd_initial_deposition_date 2017-08-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Xu, Y.' 1 ? 'Zhang, Y.' 2 ? 'Song, M.' 3 ? 'Wang, C.' 4 ? # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? US ? ? primary 'J. Med. Chem.' JMCMAR 0151 1520-4804 ? ? 61 ? 3037 3058 ;Structure-Based Discovery and Optimization of Benzo[ d]isoxazole Derivatives as Potent and Selective BET Inhibitors for Potential Treatment of Castration-Resistant Prostate Cancer (CRPC) ; 2018 ? 10.1021/acs.jmedchem.8b00103 29566488 ? ? ? ? ? ? ? ? ? ? ? 1 'To Be Published' ? 0353 ? ? ? ? ? ? ? 'Crystal structure of the first bromodomain of human BRD4 in complex with Benzo[d]isoxazole derivatives' ? ? ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, M.' 1 ? primary 'Zhang, Y.' 2 ? primary 'Song, M.' 3 ? primary 'Xue, X.' 4 ? primary 'Wang, J.' 5 ? primary 'Wang, C.' 6 ? primary 'Zhang, C.' 7 ? primary 'Li, C.' 8 ? primary 'Xiang, Q.' 9 ? primary 'Zou, L.' 10 ? primary 'Wu, X.' 11 ? primary 'Wu, C.' 12 ? primary 'Dong, B.' 13 ? primary 'Xue, W.' 14 ? primary 'Zhou, Y.' 15 ? primary 'Chen, H.' 16 ? primary 'Wu, D.' 17 ? primary 'Ding, K.' 18 ? primary 'Xu, Y.' 19 ? 1 'Xu, Y.' 20 ? 1 'Zhang, Y.' 21 ? 1 'Song, M.' 22 ? 1 'Wang, C.' 23 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bromodomain-containing protein 4' 16767.326 1 ? ? 'UNP residues 44-168' ? 2 non-polymer syn 'NITRATE ION' 62.005 3 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 4 non-polymer syn '5-bromanyl-2-methoxy-N-(6-methoxy-3-methyl-1,2-benzoxazol-5-yl)benzenesulfonamide' 427.270 1 ? ? ? ? 5 water nat water 18.015 46 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Protein HUNK1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKKGHHHHHHLVPRGSNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDM GTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _entity_poly.pdbx_seq_one_letter_code_can ;MKKGHHHHHHLVPRGSNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDM GTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NITRATE ION' NO3 3 1,2-ETHANEDIOL EDO 4 '5-bromanyl-2-methoxy-N-(6-methoxy-3-methyl-1,2-benzoxazol-5-yl)benzenesulfonamide' 8PX 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 LYS n 1 4 GLY n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 LEU n 1 12 VAL n 1 13 PRO n 1 14 ARG n 1 15 GLY n 1 16 SER n 1 17 ASN n 1 18 PRO n 1 19 PRO n 1 20 PRO n 1 21 PRO n 1 22 GLU n 1 23 THR n 1 24 SER n 1 25 ASN n 1 26 PRO n 1 27 ASN n 1 28 LYS n 1 29 PRO n 1 30 LYS n 1 31 ARG n 1 32 GLN n 1 33 THR n 1 34 ASN n 1 35 GLN n 1 36 LEU n 1 37 GLN n 1 38 TYR n 1 39 LEU n 1 40 LEU n 1 41 ARG n 1 42 VAL n 1 43 VAL n 1 44 LEU n 1 45 LYS n 1 46 THR n 1 47 LEU n 1 48 TRP n 1 49 LYS n 1 50 HIS n 1 51 GLN n 1 52 PHE n 1 53 ALA n 1 54 TRP n 1 55 PRO n 1 56 PHE n 1 57 GLN n 1 58 GLN n 1 59 PRO n 1 60 VAL n 1 61 ASP n 1 62 ALA n 1 63 VAL n 1 64 LYS n 1 65 LEU n 1 66 ASN n 1 67 LEU n 1 68 PRO n 1 69 ASP n 1 70 TYR n 1 71 TYR n 1 72 LYS n 1 73 ILE n 1 74 ILE n 1 75 LYS n 1 76 THR n 1 77 PRO n 1 78 MET n 1 79 ASP n 1 80 MET n 1 81 GLY n 1 82 THR n 1 83 ILE n 1 84 LYS n 1 85 LYS n 1 86 ARG n 1 87 LEU n 1 88 GLU n 1 89 ASN n 1 90 ASN n 1 91 TYR n 1 92 TYR n 1 93 TRP n 1 94 ASN n 1 95 ALA n 1 96 GLN n 1 97 GLU n 1 98 CYS n 1 99 ILE n 1 100 GLN n 1 101 ASP n 1 102 PHE n 1 103 ASN n 1 104 THR n 1 105 MET n 1 106 PHE n 1 107 THR n 1 108 ASN n 1 109 CYS n 1 110 TYR n 1 111 ILE n 1 112 TYR n 1 113 ASN n 1 114 LYS n 1 115 PRO n 1 116 GLY n 1 117 ASP n 1 118 ASP n 1 119 ILE n 1 120 VAL n 1 121 LEU n 1 122 MET n 1 123 ALA n 1 124 GLU n 1 125 ALA n 1 126 LEU n 1 127 GLU n 1 128 LYS n 1 129 LEU n 1 130 PHE n 1 131 LEU n 1 132 GLN n 1 133 LYS n 1 134 ILE n 1 135 ASN n 1 136 GLU n 1 137 LEU n 1 138 PRO n 1 139 THR n 1 140 GLU n 1 141 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 141 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BRD4, HUNK1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8PX non-polymer . '5-bromanyl-2-methoxy-N-(6-methoxy-3-methyl-1,2-benzoxazol-5-yl)benzenesulfonamide' ? 'C16 H15 Br N2 O5 S' 427.270 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NO3 non-polymer . 'NITRATE ION' ? 'N O3 -1' 62.005 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 28 ? ? ? A . n A 1 2 LYS 2 29 ? ? ? A . n A 1 3 LYS 3 30 ? ? ? A . n A 1 4 GLY 4 31 ? ? ? A . n A 1 5 HIS 5 32 ? ? ? A . n A 1 6 HIS 6 33 33 HIS HIS A . n A 1 7 HIS 7 34 34 HIS HIS A . n A 1 8 HIS 8 35 35 HIS HIS A . n A 1 9 HIS 9 36 36 HIS HIS A . n A 1 10 HIS 10 37 37 HIS HIS A . n A 1 11 LEU 11 38 38 LEU LEU A . n A 1 12 VAL 12 39 39 VAL VAL A . n A 1 13 PRO 13 40 40 PRO PRO A . n A 1 14 ARG 14 41 41 ARG ARG A . n A 1 15 GLY 15 42 42 GLY GLY A . n A 1 16 SER 16 43 43 SER SER A . n A 1 17 ASN 17 44 44 ASN ASN A . n A 1 18 PRO 18 45 45 PRO PRO A . n A 1 19 PRO 19 46 46 PRO PRO A . n A 1 20 PRO 20 47 47 PRO PRO A . n A 1 21 PRO 21 48 48 PRO PRO A . n A 1 22 GLU 22 49 49 GLU GLU A . n A 1 23 THR 23 50 50 THR THR A . n A 1 24 SER 24 51 51 SER SER A . n A 1 25 ASN 25 52 52 ASN ASN A . n A 1 26 PRO 26 53 53 PRO PRO A . n A 1 27 ASN 27 54 54 ASN ASN A . n A 1 28 LYS 28 55 55 LYS LYS A . n A 1 29 PRO 29 56 56 PRO PRO A . n A 1 30 LYS 30 57 57 LYS LYS A . n A 1 31 ARG 31 58 58 ARG ARG A . n A 1 32 GLN 32 59 59 GLN GLN A . n A 1 33 THR 33 60 60 THR THR A . n A 1 34 ASN 34 61 61 ASN ASN A . n A 1 35 GLN 35 62 62 GLN GLN A . n A 1 36 LEU 36 63 63 LEU LEU A . n A 1 37 GLN 37 64 64 GLN GLN A . n A 1 38 TYR 38 65 65 TYR TYR A . n A 1 39 LEU 39 66 66 LEU LEU A . n A 1 40 LEU 40 67 67 LEU LEU A . n A 1 41 ARG 41 68 68 ARG ARG A . n A 1 42 VAL 42 69 69 VAL VAL A . n A 1 43 VAL 43 70 70 VAL VAL A . n A 1 44 LEU 44 71 71 LEU LEU A . n A 1 45 LYS 45 72 72 LYS LYS A . n A 1 46 THR 46 73 73 THR THR A . n A 1 47 LEU 47 74 74 LEU LEU A . n A 1 48 TRP 48 75 75 TRP TRP A . n A 1 49 LYS 49 76 76 LYS LYS A . n A 1 50 HIS 50 77 77 HIS HIS A . n A 1 51 GLN 51 78 78 GLN GLN A . n A 1 52 PHE 52 79 79 PHE PHE A . n A 1 53 ALA 53 80 80 ALA ALA A . n A 1 54 TRP 54 81 81 TRP TRP A . n A 1 55 PRO 55 82 82 PRO PRO A . n A 1 56 PHE 56 83 83 PHE PHE A . n A 1 57 GLN 57 84 84 GLN GLN A . n A 1 58 GLN 58 85 85 GLN GLN A . n A 1 59 PRO 59 86 86 PRO PRO A . n A 1 60 VAL 60 87 87 VAL VAL A . n A 1 61 ASP 61 88 88 ASP ASP A . n A 1 62 ALA 62 89 89 ALA ALA A . n A 1 63 VAL 63 90 90 VAL VAL A . n A 1 64 LYS 64 91 91 LYS LYS A . n A 1 65 LEU 65 92 92 LEU LEU A . n A 1 66 ASN 66 93 93 ASN ASN A . n A 1 67 LEU 67 94 94 LEU LEU A . n A 1 68 PRO 68 95 95 PRO PRO A . n A 1 69 ASP 69 96 96 ASP ASP A . n A 1 70 TYR 70 97 97 TYR TYR A . n A 1 71 TYR 71 98 98 TYR TYR A . n A 1 72 LYS 72 99 99 LYS LYS A . n A 1 73 ILE 73 100 100 ILE ILE A . n A 1 74 ILE 74 101 101 ILE ILE A . n A 1 75 LYS 75 102 102 LYS LYS A . n A 1 76 THR 76 103 103 THR THR A . n A 1 77 PRO 77 104 104 PRO PRO A . n A 1 78 MET 78 105 105 MET MET A . n A 1 79 ASP 79 106 106 ASP ASP A . n A 1 80 MET 80 107 107 MET MET A . n A 1 81 GLY 81 108 108 GLY GLY A . n A 1 82 THR 82 109 109 THR THR A . n A 1 83 ILE 83 110 110 ILE ILE A . n A 1 84 LYS 84 111 111 LYS LYS A . n A 1 85 LYS 85 112 112 LYS LYS A . n A 1 86 ARG 86 113 113 ARG ARG A . n A 1 87 LEU 87 114 114 LEU LEU A . n A 1 88 GLU 88 115 115 GLU GLU A . n A 1 89 ASN 89 116 116 ASN ASN A . n A 1 90 ASN 90 117 117 ASN ASN A . n A 1 91 TYR 91 118 118 TYR TYR A . n A 1 92 TYR 92 119 119 TYR TYR A . n A 1 93 TRP 93 120 120 TRP TRP A . n A 1 94 ASN 94 121 121 ASN ASN A . n A 1 95 ALA 95 122 122 ALA ALA A . n A 1 96 GLN 96 123 123 GLN GLN A . n A 1 97 GLU 97 124 124 GLU GLU A . n A 1 98 CYS 98 125 125 CYS CYS A . n A 1 99 ILE 99 126 126 ILE ILE A . n A 1 100 GLN 100 127 127 GLN GLN A . n A 1 101 ASP 101 128 128 ASP ASP A . n A 1 102 PHE 102 129 129 PHE PHE A . n A 1 103 ASN 103 130 130 ASN ASN A . n A 1 104 THR 104 131 131 THR THR A . n A 1 105 MET 105 132 132 MET MET A . n A 1 106 PHE 106 133 133 PHE PHE A . n A 1 107 THR 107 134 134 THR THR A . n A 1 108 ASN 108 135 135 ASN ASN A . n A 1 109 CYS 109 136 136 CYS CYS A . n A 1 110 TYR 110 137 137 TYR TYR A . n A 1 111 ILE 111 138 138 ILE ILE A . n A 1 112 TYR 112 139 139 TYR TYR A . n A 1 113 ASN 113 140 140 ASN ASN A . n A 1 114 LYS 114 141 141 LYS LYS A . n A 1 115 PRO 115 142 142 PRO PRO A . n A 1 116 GLY 116 143 143 GLY GLY A . n A 1 117 ASP 117 144 144 ASP ASP A . n A 1 118 ASP 118 145 145 ASP ASP A . n A 1 119 ILE 119 146 146 ILE ILE A . n A 1 120 VAL 120 147 147 VAL VAL A . n A 1 121 LEU 121 148 148 LEU LEU A . n A 1 122 MET 122 149 149 MET MET A . n A 1 123 ALA 123 150 150 ALA ALA A . n A 1 124 GLU 124 151 151 GLU GLU A . n A 1 125 ALA 125 152 152 ALA ALA A . n A 1 126 LEU 126 153 153 LEU LEU A . n A 1 127 GLU 127 154 154 GLU GLU A . n A 1 128 LYS 128 155 155 LYS LYS A . n A 1 129 LEU 129 156 156 LEU LEU A . n A 1 130 PHE 130 157 157 PHE PHE A . n A 1 131 LEU 131 158 158 LEU LEU A . n A 1 132 GLN 132 159 159 GLN GLN A . n A 1 133 LYS 133 160 160 LYS LYS A . n A 1 134 ILE 134 161 161 ILE ILE A . n A 1 135 ASN 135 162 162 ASN ASN A . n A 1 136 GLU 136 163 163 GLU GLU A . n A 1 137 LEU 137 164 164 LEU LEU A . n A 1 138 PRO 138 165 165 PRO PRO A . n A 1 139 THR 139 166 ? ? ? A . n A 1 140 GLU 140 167 ? ? ? A . n A 1 141 GLU 141 168 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 1 201 1 NO3 NO3 A . C 2 NO3 1 202 2 NO3 NO3 A . D 2 NO3 1 203 3 NO3 NO3 A . E 3 EDO 1 204 1 EDO EDO A . F 3 EDO 1 205 2 EDO EDO A . G 4 8PX 1 206 1 8PX E0G A . H 5 HOH 1 301 46 HOH HOH A . H 5 HOH 2 302 16 HOH HOH A . H 5 HOH 3 303 13 HOH HOH A . H 5 HOH 4 304 12 HOH HOH A . H 5 HOH 5 305 37 HOH HOH A . H 5 HOH 6 306 42 HOH HOH A . H 5 HOH 7 307 24 HOH HOH A . H 5 HOH 8 308 1 HOH HOH A . H 5 HOH 9 309 30 HOH HOH A . H 5 HOH 10 310 48 HOH HOH A . H 5 HOH 11 311 7 HOH HOH A . H 5 HOH 12 312 26 HOH HOH A . H 5 HOH 13 313 2 HOH HOH A . H 5 HOH 14 314 5 HOH HOH A . H 5 HOH 15 315 27 HOH HOH A . H 5 HOH 16 316 23 HOH HOH A . H 5 HOH 17 317 41 HOH HOH A . H 5 HOH 18 318 3 HOH HOH A . H 5 HOH 19 319 14 HOH HOH A . H 5 HOH 20 320 29 HOH HOH A . H 5 HOH 21 321 44 HOH HOH A . H 5 HOH 22 322 32 HOH HOH A . H 5 HOH 23 323 18 HOH HOH A . H 5 HOH 24 324 15 HOH HOH A . H 5 HOH 25 325 21 HOH HOH A . H 5 HOH 26 326 9 HOH HOH A . H 5 HOH 27 327 22 HOH HOH A . H 5 HOH 28 328 49 HOH HOH A . H 5 HOH 29 329 8 HOH HOH A . H 5 HOH 30 330 25 HOH HOH A . H 5 HOH 31 331 33 HOH HOH A . H 5 HOH 32 332 45 HOH HOH A . H 5 HOH 33 333 31 HOH HOH A . H 5 HOH 34 334 17 HOH HOH A . H 5 HOH 35 335 35 HOH HOH A . H 5 HOH 36 336 47 HOH HOH A . H 5 HOH 37 337 20 HOH HOH A . H 5 HOH 38 338 19 HOH HOH A . H 5 HOH 39 339 11 HOH HOH A . H 5 HOH 40 340 40 HOH HOH A . H 5 HOH 41 341 6 HOH HOH A . H 5 HOH 42 342 36 HOH HOH A . H 5 HOH 43 343 4 HOH HOH A . H 5 HOH 44 344 10 HOH HOH A . H 5 HOH 45 345 34 HOH HOH A . H 5 HOH 46 346 28 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0135 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.17 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5Y8Y _cell.details ? _cell.formula_units_Z ? _cell.length_a 34.620 _cell.length_a_esd ? _cell.length_b 47.230 _cell.length_b_esd ? _cell.length_c 78.510 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Y8Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5Y8Y _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.91 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 35.74 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20% PEG3350, 0.2M NaNO3, 0.1M HEPES, 10% EtGhly,pH7' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 80 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-06-22 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97853 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97853 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5Y8Y _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.870 _reflns.d_resolution_low 39.250 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11017 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.900 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.200 _reflns.pdbx_Rmerge_I_obs 0.162 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.100 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects 63 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.173 _reflns.pdbx_Rpim_I_all 0.061 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 79296 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.991 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.870 _reflns_shell.d_res_low 1.910 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 698 _reflns_shell.percent_possible_all 99.600 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.659 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 7.700 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.705 _reflns_shell.pdbx_Rpim_I_all 0.245 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.902 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 4.2700 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] -1.0200 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -3.2500 _refine.B_iso_max 62.120 _refine.B_iso_mean 25.1830 _refine.B_iso_min 13.460 _refine.correlation_coeff_Fo_to_Fc 0.9480 _refine.correlation_coeff_Fo_to_Fc_free 0.9210 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5Y8Y _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.8700 _refine.ls_d_res_low 39.250 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10443 _refine.ls_number_reflns_R_free 537 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.4400 _refine.ls_percent_reflns_R_free 4.9000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1927 _refine.ls_R_factor_R_free 0.2470 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1898 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1700 _refine.pdbx_overall_ESU_R_Free 0.1620 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 4.3810 _refine.overall_SU_ML 0.1280 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.8700 _refine_hist.d_res_low 39.250 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 46 _refine_hist.number_atoms_total 1206 _refine_hist.pdbx_number_residues_total 133 _refine_hist.pdbx_B_iso_mean_ligand 30.43 _refine_hist.pdbx_B_iso_mean_solvent 29.39 _refine_hist.pdbx_number_atoms_protein 1115 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.016 0.020 1212 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 1141 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.797 1.982 1647 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.016 3.004 2631 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.089 5.000 136 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 32.903 25.085 59 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 14.659 15.000 205 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 11.915 15.000 4 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.115 0.200 167 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.011 0.021 1354 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 284 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.8700 _refine_ls_shell.d_res_low 1.9190 _refine_ls_shell.number_reflns_all 787 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 41 _refine_ls_shell.number_reflns_R_work 746 _refine_ls_shell.percent_reflns_obs 99.3700 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2570 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2780 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5Y8Y _struct.title 'Crystal Structure Analysis of the BRD4' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5Y8Y _struct_keywords.text 'BRD4(1), Bromodomain, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BRD4_HUMAN _struct_ref.pdbx_db_accession O60885 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQ ECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _struct_ref.pdbx_align_begin 44 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5Y8Y _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 17 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 141 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O60885 _struct_ref_seq.db_align_beg 44 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 168 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 44 _struct_ref_seq.pdbx_auth_seq_align_end 168 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5Y8Y MET A 1 ? UNP O60885 ? ? 'expression tag' 28 1 1 5Y8Y LYS A 2 ? UNP O60885 ? ? 'expression tag' 29 2 1 5Y8Y LYS A 3 ? UNP O60885 ? ? 'expression tag' 30 3 1 5Y8Y GLY A 4 ? UNP O60885 ? ? 'expression tag' 31 4 1 5Y8Y HIS A 5 ? UNP O60885 ? ? 'expression tag' 32 5 1 5Y8Y HIS A 6 ? UNP O60885 ? ? 'expression tag' 33 6 1 5Y8Y HIS A 7 ? UNP O60885 ? ? 'expression tag' 34 7 1 5Y8Y HIS A 8 ? UNP O60885 ? ? 'expression tag' 35 8 1 5Y8Y HIS A 9 ? UNP O60885 ? ? 'expression tag' 36 9 1 5Y8Y HIS A 10 ? UNP O60885 ? ? 'expression tag' 37 10 1 5Y8Y LEU A 11 ? UNP O60885 ? ? 'expression tag' 38 11 1 5Y8Y VAL A 12 ? UNP O60885 ? ? 'expression tag' 39 12 1 5Y8Y PRO A 13 ? UNP O60885 ? ? 'expression tag' 40 13 1 5Y8Y ARG A 14 ? UNP O60885 ? ? 'expression tag' 41 14 1 5Y8Y GLY A 15 ? UNP O60885 ? ? 'expression tag' 42 15 1 5Y8Y SER A 16 ? UNP O60885 ? ? 'expression tag' 43 16 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 140 ? 1 MORE 1 ? 1 'SSA (A^2)' 8560 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 33 ? VAL A 42 ? THR A 60 VAL A 69 1 ? 10 HELX_P HELX_P2 AA2 VAL A 42 ? HIS A 50 ? VAL A 69 HIS A 77 1 ? 9 HELX_P HELX_P3 AA3 ALA A 53 ? GLN A 57 ? ALA A 80 GLN A 84 5 ? 5 HELX_P HELX_P4 AA4 ASP A 69 ? ILE A 74 ? ASP A 96 ILE A 101 1 ? 6 HELX_P HELX_P5 AA5 ASP A 79 ? ASN A 89 ? ASP A 106 ASN A 116 1 ? 11 HELX_P HELX_P6 AA6 ASN A 94 ? ASN A 113 ? ASN A 121 ASN A 140 1 ? 20 HELX_P HELX_P7 AA7 ASP A 117 ? ASN A 135 ? ASP A 144 ASN A 162 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id VAL _struct_mon_prot_cis.label_seq_id 12 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id VAL _struct_mon_prot_cis.auth_seq_id 39 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 13 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 40 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -6.42 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NO3 201 ? 5 'binding site for residue NO3 A 201' AC2 Software A NO3 202 ? 8 'binding site for residue NO3 A 202' AC3 Software A NO3 203 ? 4 'binding site for residue NO3 A 203' AC4 Software A EDO 204 ? 5 'binding site for residue EDO A 204' AC5 Software A EDO 205 ? 5 'binding site for residue EDO A 205' AC6 Software A 8PX 206 ? 11 'binding site for residue 8PX A 206' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 LYS A 30 ? LYS A 57 . ? 1_555 ? 2 AC1 5 TYR A 71 ? TYR A 98 . ? 3_644 ? 3 AC1 5 LYS A 72 ? LYS A 99 . ? 3_644 ? 4 AC1 5 LYS A 75 ? LYS A 102 . ? 3_644 ? 5 AC1 5 ASP A 118 ? ASP A 145 . ? 2_554 ? 6 AC2 8 HIS A 8 ? HIS A 35 . ? 1_555 ? 7 AC2 8 HIS A 9 ? HIS A 36 . ? 1_555 ? 8 AC2 8 HIS A 10 ? HIS A 37 . ? 1_555 ? 9 AC2 8 LEU A 11 ? LEU A 38 . ? 1_555 ? 10 AC2 8 VAL A 12 ? VAL A 39 . ? 1_555 ? 11 AC2 8 GLN A 96 ? GLN A 123 . ? 1_565 ? 12 AC2 8 ILE A 99 ? ILE A 126 . ? 1_565 ? 13 AC2 8 ASN A 103 ? ASN A 130 . ? 1_565 ? 14 AC3 4 PRO A 19 ? PRO A 46 . ? 1_555 ? 15 AC3 4 TRP A 93 ? TRP A 120 . ? 3_654 ? 16 AC3 4 ASN A 94 ? ASN A 121 . ? 3_654 ? 17 AC3 4 HOH H . ? HOH A 314 . ? 1_555 ? 18 AC4 5 ILE A 73 ? ILE A 100 . ? 1_555 ? 19 AC4 5 ILE A 74 ? ILE A 101 . ? 1_555 ? 20 AC4 5 LYS A 75 ? LYS A 102 . ? 1_555 ? 21 AC4 5 THR A 76 ? THR A 103 . ? 1_555 ? 22 AC4 5 ASN A 108 ? ASN A 135 . ? 1_555 ? 23 AC5 5 ASN A 89 ? ASN A 116 . ? 2_555 ? 24 AC5 5 ASN A 90 ? ASN A 117 . ? 2_555 ? 25 AC5 5 ASP A 117 ? ASP A 144 . ? 1_555 ? 26 AC5 5 ASP A 118 ? ASP A 145 . ? 1_555 ? 27 AC5 5 HOH H . ? HOH A 328 . ? 1_555 ? 28 AC6 11 TRP A 54 ? TRP A 81 . ? 1_555 ? 29 AC6 11 PRO A 55 ? PRO A 82 . ? 1_555 ? 30 AC6 11 VAL A 60 ? VAL A 87 . ? 1_555 ? 31 AC6 11 LEU A 65 ? LEU A 92 . ? 1_555 ? 32 AC6 11 LEU A 67 ? LEU A 94 . ? 1_555 ? 33 AC6 11 LYS A 72 ? LYS A 99 . ? 4_455 ? 34 AC6 11 ASN A 113 ? ASN A 140 . ? 1_555 ? 35 AC6 11 MET A 122 ? MET A 149 . ? 1_555 ? 36 AC6 11 HOH H . ? HOH A 315 . ? 1_555 ? 37 AC6 11 HOH H . ? HOH A 316 . ? 1_555 ? 38 AC6 11 HOH H . ? HOH A 320 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 306 ? ? O A HOH 340 ? ? 1.39 2 1 NZ A LYS 160 ? ? O A HOH 301 ? ? 2.15 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LEU _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 94 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -119.45 _pdbx_validate_torsion.psi 65.88 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 28 ? A MET 1 2 1 Y 1 A LYS 29 ? A LYS 2 3 1 Y 1 A LYS 30 ? A LYS 3 4 1 Y 1 A GLY 31 ? A GLY 4 5 1 Y 1 A HIS 32 ? A HIS 5 6 1 Y 1 A THR 166 ? A THR 139 7 1 Y 1 A GLU 167 ? A GLU 140 8 1 Y 1 A GLU 168 ? A GLU 141 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8PX CAY C N N 1 8PX OAI O N N 2 8PX CAD C Y N 3 8PX CAE C Y N 4 8PX CAF C Y N 5 8PX OAG O Y N 6 8PX NAL N Y N 7 8PX CAJ C Y N 8 8PX CAK C N N 9 8PX CAA C Y N 10 8PX CAB C Y N 11 8PX CAC C Y N 12 8PX NAH N N N 13 8PX SAM S N N 14 8PX OAN O N N 15 8PX OAO O N N 16 8PX CAP C Y N 17 8PX CAU C Y N 18 8PX CAT C Y N 19 8PX BRAX BR N N 20 8PX CAS C Y N 21 8PX CAR C Y N 22 8PX CAQ C Y N 23 8PX OAV O N N 24 8PX CAW C N N 25 8PX H1 H N N 26 8PX H2 H N N 27 8PX H3 H N N 28 8PX H4 H N N 29 8PX H5 H N N 30 8PX H6 H N N 31 8PX H7 H N N 32 8PX H8 H N N 33 8PX H9 H N N 34 8PX H10 H N N 35 8PX H11 H N N 36 8PX H12 H N N 37 8PX H13 H N N 38 8PX H14 H N N 39 8PX H15 H N N 40 ALA N N N N 41 ALA CA C N S 42 ALA C C N N 43 ALA O O N N 44 ALA CB C N N 45 ALA OXT O N N 46 ALA H H N N 47 ALA H2 H N N 48 ALA HA H N N 49 ALA HB1 H N N 50 ALA HB2 H N N 51 ALA HB3 H N N 52 ALA HXT H N N 53 ARG N N N N 54 ARG CA C N S 55 ARG C C N N 56 ARG O O N N 57 ARG CB C N N 58 ARG CG C N N 59 ARG CD C N N 60 ARG NE N N N 61 ARG CZ C N N 62 ARG NH1 N N N 63 ARG NH2 N N N 64 ARG OXT O N N 65 ARG H H N N 66 ARG H2 H N N 67 ARG HA H N N 68 ARG HB2 H N N 69 ARG HB3 H N N 70 ARG HG2 H N N 71 ARG HG3 H N N 72 ARG HD2 H N N 73 ARG HD3 H N N 74 ARG HE H N N 75 ARG HH11 H N N 76 ARG HH12 H N N 77 ARG HH21 H N N 78 ARG HH22 H N N 79 ARG HXT H N N 80 ASN N N N N 81 ASN CA C N S 82 ASN C C N N 83 ASN O O N N 84 ASN CB C N N 85 ASN CG C N N 86 ASN OD1 O N N 87 ASN ND2 N N N 88 ASN OXT O N N 89 ASN H H N N 90 ASN H2 H N N 91 ASN HA H N N 92 ASN HB2 H N N 93 ASN HB3 H N N 94 ASN HD21 H N N 95 ASN HD22 H N N 96 ASN HXT H N N 97 ASP N N N N 98 ASP CA C N S 99 ASP C C N N 100 ASP O O N N 101 ASP CB C N N 102 ASP CG C N N 103 ASP OD1 O N N 104 ASP OD2 O N N 105 ASP OXT O N N 106 ASP H H N N 107 ASP H2 H N N 108 ASP HA H N N 109 ASP HB2 H N N 110 ASP HB3 H N N 111 ASP HD2 H N N 112 ASP HXT H N N 113 CYS N N N N 114 CYS CA C N R 115 CYS C C N N 116 CYS O O N N 117 CYS CB C N N 118 CYS SG S N N 119 CYS OXT O N N 120 CYS H H N N 121 CYS H2 H N N 122 CYS HA H N N 123 CYS HB2 H N N 124 CYS HB3 H N N 125 CYS HG H N N 126 CYS HXT H N N 127 EDO C1 C N N 128 EDO O1 O N N 129 EDO C2 C N N 130 EDO O2 O N N 131 EDO H11 H N N 132 EDO H12 H N N 133 EDO HO1 H N N 134 EDO H21 H N N 135 EDO H22 H N N 136 EDO HO2 H N N 137 GLN N N N N 138 GLN CA C N S 139 GLN C C N N 140 GLN O O N N 141 GLN CB C N N 142 GLN CG C N N 143 GLN CD C N N 144 GLN OE1 O N N 145 GLN NE2 N N N 146 GLN OXT O N N 147 GLN H H N N 148 GLN H2 H N N 149 GLN HA H N N 150 GLN HB2 H N N 151 GLN HB3 H N N 152 GLN HG2 H N N 153 GLN HG3 H N N 154 GLN HE21 H N N 155 GLN HE22 H N N 156 GLN HXT H N N 157 GLU N N N N 158 GLU CA C N S 159 GLU C C N N 160 GLU O O N N 161 GLU CB C N N 162 GLU CG C N N 163 GLU CD C N N 164 GLU OE1 O N N 165 GLU OE2 O N N 166 GLU OXT O N N 167 GLU H H N N 168 GLU H2 H N N 169 GLU HA H N N 170 GLU HB2 H N N 171 GLU HB3 H N N 172 GLU HG2 H N N 173 GLU HG3 H N N 174 GLU HE2 H N N 175 GLU HXT H N N 176 GLY N N N N 177 GLY CA C N N 178 GLY C C N N 179 GLY O O N N 180 GLY OXT O N N 181 GLY H H N N 182 GLY H2 H N N 183 GLY HA2 H N N 184 GLY HA3 H N N 185 GLY HXT H N N 186 HIS N N N N 187 HIS CA C N S 188 HIS C C N N 189 HIS O O N N 190 HIS CB C N N 191 HIS CG C Y N 192 HIS ND1 N Y N 193 HIS CD2 C Y N 194 HIS CE1 C Y N 195 HIS NE2 N Y N 196 HIS OXT O N N 197 HIS H H N N 198 HIS H2 H N N 199 HIS HA H N N 200 HIS HB2 H N N 201 HIS HB3 H N N 202 HIS HD1 H N N 203 HIS HD2 H N N 204 HIS HE1 H N N 205 HIS HE2 H N N 206 HIS HXT H N N 207 HOH O O N N 208 HOH H1 H N N 209 HOH H2 H N N 210 ILE N N N N 211 ILE CA C N S 212 ILE C C N N 213 ILE O O N N 214 ILE CB C N S 215 ILE CG1 C N N 216 ILE CG2 C N N 217 ILE CD1 C N N 218 ILE OXT O N N 219 ILE H H N N 220 ILE H2 H N N 221 ILE HA H N N 222 ILE HB H N N 223 ILE HG12 H N N 224 ILE HG13 H N N 225 ILE HG21 H N N 226 ILE HG22 H N N 227 ILE HG23 H N N 228 ILE HD11 H N N 229 ILE HD12 H N N 230 ILE HD13 H N N 231 ILE HXT H N N 232 LEU N N N N 233 LEU CA C N S 234 LEU C C N N 235 LEU O O N N 236 LEU CB C N N 237 LEU CG C N N 238 LEU CD1 C N N 239 LEU CD2 C N N 240 LEU OXT O N N 241 LEU H H N N 242 LEU H2 H N N 243 LEU HA H N N 244 LEU HB2 H N N 245 LEU HB3 H N N 246 LEU HG H N N 247 LEU HD11 H N N 248 LEU HD12 H N N 249 LEU HD13 H N N 250 LEU HD21 H N N 251 LEU HD22 H N N 252 LEU HD23 H N N 253 LEU HXT H N N 254 LYS N N N N 255 LYS CA C N S 256 LYS C C N N 257 LYS O O N N 258 LYS CB C N N 259 LYS CG C N N 260 LYS CD C N N 261 LYS CE C N N 262 LYS NZ N N N 263 LYS OXT O N N 264 LYS H H N N 265 LYS H2 H N N 266 LYS HA H N N 267 LYS HB2 H N N 268 LYS HB3 H N N 269 LYS HG2 H N N 270 LYS HG3 H N N 271 LYS HD2 H N N 272 LYS HD3 H N N 273 LYS HE2 H N N 274 LYS HE3 H N N 275 LYS HZ1 H N N 276 LYS HZ2 H N N 277 LYS HZ3 H N N 278 LYS HXT H N N 279 MET N N N N 280 MET CA C N S 281 MET C C N N 282 MET O O N N 283 MET CB C N N 284 MET CG C N N 285 MET SD S N N 286 MET CE C N N 287 MET OXT O N N 288 MET H H N N 289 MET H2 H N N 290 MET HA H N N 291 MET HB2 H N N 292 MET HB3 H N N 293 MET HG2 H N N 294 MET HG3 H N N 295 MET HE1 H N N 296 MET HE2 H N N 297 MET HE3 H N N 298 MET HXT H N N 299 NO3 N N N N 300 NO3 O1 O N N 301 NO3 O2 O N N 302 NO3 O3 O N N 303 PHE N N N N 304 PHE CA C N S 305 PHE C C N N 306 PHE O O N N 307 PHE CB C N N 308 PHE CG C Y N 309 PHE CD1 C Y N 310 PHE CD2 C Y N 311 PHE CE1 C Y N 312 PHE CE2 C Y N 313 PHE CZ C Y N 314 PHE OXT O N N 315 PHE H H N N 316 PHE H2 H N N 317 PHE HA H N N 318 PHE HB2 H N N 319 PHE HB3 H N N 320 PHE HD1 H N N 321 PHE HD2 H N N 322 PHE HE1 H N N 323 PHE HE2 H N N 324 PHE HZ H N N 325 PHE HXT H N N 326 PRO N N N N 327 PRO CA C N S 328 PRO C C N N 329 PRO O O N N 330 PRO CB C N N 331 PRO CG C N N 332 PRO CD C N N 333 PRO OXT O N N 334 PRO H H N N 335 PRO HA H N N 336 PRO HB2 H N N 337 PRO HB3 H N N 338 PRO HG2 H N N 339 PRO HG3 H N N 340 PRO HD2 H N N 341 PRO HD3 H N N 342 PRO HXT H N N 343 SER N N N N 344 SER CA C N S 345 SER C C N N 346 SER O O N N 347 SER CB C N N 348 SER OG O N N 349 SER OXT O N N 350 SER H H N N 351 SER H2 H N N 352 SER HA H N N 353 SER HB2 H N N 354 SER HB3 H N N 355 SER HG H N N 356 SER HXT H N N 357 THR N N N N 358 THR CA C N S 359 THR C C N N 360 THR O O N N 361 THR CB C N R 362 THR OG1 O N N 363 THR CG2 C N N 364 THR OXT O N N 365 THR H H N N 366 THR H2 H N N 367 THR HA H N N 368 THR HB H N N 369 THR HG1 H N N 370 THR HG21 H N N 371 THR HG22 H N N 372 THR HG23 H N N 373 THR HXT H N N 374 TRP N N N N 375 TRP CA C N S 376 TRP C C N N 377 TRP O O N N 378 TRP CB C N N 379 TRP CG C Y N 380 TRP CD1 C Y N 381 TRP CD2 C Y N 382 TRP NE1 N Y N 383 TRP CE2 C Y N 384 TRP CE3 C Y N 385 TRP CZ2 C Y N 386 TRP CZ3 C Y N 387 TRP CH2 C Y N 388 TRP OXT O N N 389 TRP H H N N 390 TRP H2 H N N 391 TRP HA H N N 392 TRP HB2 H N N 393 TRP HB3 H N N 394 TRP HD1 H N N 395 TRP HE1 H N N 396 TRP HE3 H N N 397 TRP HZ2 H N N 398 TRP HZ3 H N N 399 TRP HH2 H N N 400 TRP HXT H N N 401 TYR N N N N 402 TYR CA C N S 403 TYR C C N N 404 TYR O O N N 405 TYR CB C N N 406 TYR CG C Y N 407 TYR CD1 C Y N 408 TYR CD2 C Y N 409 TYR CE1 C Y N 410 TYR CE2 C Y N 411 TYR CZ C Y N 412 TYR OH O N N 413 TYR OXT O N N 414 TYR H H N N 415 TYR H2 H N N 416 TYR HA H N N 417 TYR HB2 H N N 418 TYR HB3 H N N 419 TYR HD1 H N N 420 TYR HD2 H N N 421 TYR HE1 H N N 422 TYR HE2 H N N 423 TYR HH H N N 424 TYR HXT H N N 425 VAL N N N N 426 VAL CA C N S 427 VAL C C N N 428 VAL O O N N 429 VAL CB C N N 430 VAL CG1 C N N 431 VAL CG2 C N N 432 VAL OXT O N N 433 VAL H H N N 434 VAL H2 H N N 435 VAL HA H N N 436 VAL HB H N N 437 VAL HG11 H N N 438 VAL HG12 H N N 439 VAL HG13 H N N 440 VAL HG21 H N N 441 VAL HG22 H N N 442 VAL HG23 H N N 443 VAL HXT H N N 444 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8PX CAK CAJ sing N N 1 8PX CAJ NAL doub Y N 2 8PX CAJ CAA sing Y N 3 8PX NAL OAG sing Y N 4 8PX CAA CAB doub Y N 5 8PX CAA CAF sing Y N 6 8PX OAG CAF sing Y N 7 8PX CAB CAC sing Y N 8 8PX CAF CAE doub Y N 9 8PX OAN SAM doub N N 10 8PX CAC NAH sing N N 11 8PX CAC CAD doub Y N 12 8PX CAE CAD sing Y N 13 8PX NAH SAM sing N N 14 8PX CAD OAI sing N N 15 8PX SAM OAO doub N N 16 8PX SAM CAP sing N N 17 8PX OAI CAY sing N N 18 8PX CAP CAU sing Y N 19 8PX CAP CAQ doub Y N 20 8PX CAU CAT doub Y N 21 8PX OAV CAQ sing N N 22 8PX OAV CAW sing N N 23 8PX CAQ CAR sing Y N 24 8PX CAT BRAX sing N N 25 8PX CAT CAS sing Y N 26 8PX CAR CAS doub Y N 27 8PX CAY H1 sing N N 28 8PX CAY H2 sing N N 29 8PX CAY H3 sing N N 30 8PX CAE H4 sing N N 31 8PX CAK H5 sing N N 32 8PX CAK H6 sing N N 33 8PX CAK H7 sing N N 34 8PX CAB H8 sing N N 35 8PX NAH H9 sing N N 36 8PX CAU H10 sing N N 37 8PX CAS H11 sing N N 38 8PX CAR H12 sing N N 39 8PX CAW H13 sing N N 40 8PX CAW H14 sing N N 41 8PX CAW H15 sing N N 42 ALA N CA sing N N 43 ALA N H sing N N 44 ALA N H2 sing N N 45 ALA CA C sing N N 46 ALA CA CB sing N N 47 ALA CA HA sing N N 48 ALA C O doub N N 49 ALA C OXT sing N N 50 ALA CB HB1 sing N N 51 ALA CB HB2 sing N N 52 ALA CB HB3 sing N N 53 ALA OXT HXT sing N N 54 ARG N CA sing N N 55 ARG N H sing N N 56 ARG N H2 sing N N 57 ARG CA C sing N N 58 ARG CA CB sing N N 59 ARG CA HA sing N N 60 ARG C O doub N N 61 ARG C OXT sing N N 62 ARG CB CG sing N N 63 ARG CB HB2 sing N N 64 ARG CB HB3 sing N N 65 ARG CG CD sing N N 66 ARG CG HG2 sing N N 67 ARG CG HG3 sing N N 68 ARG CD NE sing N N 69 ARG CD HD2 sing N N 70 ARG CD HD3 sing N N 71 ARG NE CZ sing N N 72 ARG NE HE sing N N 73 ARG CZ NH1 sing N N 74 ARG CZ NH2 doub N N 75 ARG NH1 HH11 sing N N 76 ARG NH1 HH12 sing N N 77 ARG NH2 HH21 sing N N 78 ARG NH2 HH22 sing N N 79 ARG OXT HXT sing N N 80 ASN N CA sing N N 81 ASN N H sing N N 82 ASN N H2 sing N N 83 ASN CA C sing N N 84 ASN CA CB sing N N 85 ASN CA HA sing N N 86 ASN C O doub N N 87 ASN C OXT sing N N 88 ASN CB CG sing N N 89 ASN CB HB2 sing N N 90 ASN CB HB3 sing N N 91 ASN CG OD1 doub N N 92 ASN CG ND2 sing N N 93 ASN ND2 HD21 sing N N 94 ASN ND2 HD22 sing N N 95 ASN OXT HXT sing N N 96 ASP N CA sing N N 97 ASP N H sing N N 98 ASP N H2 sing N N 99 ASP CA C sing N N 100 ASP CA CB sing N N 101 ASP CA HA sing N N 102 ASP C O doub N N 103 ASP C OXT sing N N 104 ASP CB CG sing N N 105 ASP CB HB2 sing N N 106 ASP CB HB3 sing N N 107 ASP CG OD1 doub N N 108 ASP CG OD2 sing N N 109 ASP OD2 HD2 sing N N 110 ASP OXT HXT sing N N 111 CYS N CA sing N N 112 CYS N H sing N N 113 CYS N H2 sing N N 114 CYS CA C sing N N 115 CYS CA CB sing N N 116 CYS CA HA sing N N 117 CYS C O doub N N 118 CYS C OXT sing N N 119 CYS CB SG sing N N 120 CYS CB HB2 sing N N 121 CYS CB HB3 sing N N 122 CYS SG HG sing N N 123 CYS OXT HXT sing N N 124 EDO C1 O1 sing N N 125 EDO C1 C2 sing N N 126 EDO C1 H11 sing N N 127 EDO C1 H12 sing N N 128 EDO O1 HO1 sing N N 129 EDO C2 O2 sing N N 130 EDO C2 H21 sing N N 131 EDO C2 H22 sing N N 132 EDO O2 HO2 sing N N 133 GLN N CA sing N N 134 GLN N H sing N N 135 GLN N H2 sing N N 136 GLN CA C sing N N 137 GLN CA CB sing N N 138 GLN CA HA sing N N 139 GLN C O doub N N 140 GLN C OXT sing N N 141 GLN CB CG sing N N 142 GLN CB HB2 sing N N 143 GLN CB HB3 sing N N 144 GLN CG CD sing N N 145 GLN CG HG2 sing N N 146 GLN CG HG3 sing N N 147 GLN CD OE1 doub N N 148 GLN CD NE2 sing N N 149 GLN NE2 HE21 sing N N 150 GLN NE2 HE22 sing N N 151 GLN OXT HXT sing N N 152 GLU N CA sing N N 153 GLU N H sing N N 154 GLU N H2 sing N N 155 GLU CA C sing N N 156 GLU CA CB sing N N 157 GLU CA HA sing N N 158 GLU C O doub N N 159 GLU C OXT sing N N 160 GLU CB CG sing N N 161 GLU CB HB2 sing N N 162 GLU CB HB3 sing N N 163 GLU CG CD sing N N 164 GLU CG HG2 sing N N 165 GLU CG HG3 sing N N 166 GLU CD OE1 doub N N 167 GLU CD OE2 sing N N 168 GLU OE2 HE2 sing N N 169 GLU OXT HXT sing N N 170 GLY N CA sing N N 171 GLY N H sing N N 172 GLY N H2 sing N N 173 GLY CA C sing N N 174 GLY CA HA2 sing N N 175 GLY CA HA3 sing N N 176 GLY C O doub N N 177 GLY C OXT sing N N 178 GLY OXT HXT sing N N 179 HIS N CA sing N N 180 HIS N H sing N N 181 HIS N H2 sing N N 182 HIS CA C sing N N 183 HIS CA CB sing N N 184 HIS CA HA sing N N 185 HIS C O doub N N 186 HIS C OXT sing N N 187 HIS CB CG sing N N 188 HIS CB HB2 sing N N 189 HIS CB HB3 sing N N 190 HIS CG ND1 sing Y N 191 HIS CG CD2 doub Y N 192 HIS ND1 CE1 doub Y N 193 HIS ND1 HD1 sing N N 194 HIS CD2 NE2 sing Y N 195 HIS CD2 HD2 sing N N 196 HIS CE1 NE2 sing Y N 197 HIS CE1 HE1 sing N N 198 HIS NE2 HE2 sing N N 199 HIS OXT HXT sing N N 200 HOH O H1 sing N N 201 HOH O H2 sing N N 202 ILE N CA sing N N 203 ILE N H sing N N 204 ILE N H2 sing N N 205 ILE CA C sing N N 206 ILE CA CB sing N N 207 ILE CA HA sing N N 208 ILE C O doub N N 209 ILE C OXT sing N N 210 ILE CB CG1 sing N N 211 ILE CB CG2 sing N N 212 ILE CB HB sing N N 213 ILE CG1 CD1 sing N N 214 ILE CG1 HG12 sing N N 215 ILE CG1 HG13 sing N N 216 ILE CG2 HG21 sing N N 217 ILE CG2 HG22 sing N N 218 ILE CG2 HG23 sing N N 219 ILE CD1 HD11 sing N N 220 ILE CD1 HD12 sing N N 221 ILE CD1 HD13 sing N N 222 ILE OXT HXT sing N N 223 LEU N CA sing N N 224 LEU N H sing N N 225 LEU N H2 sing N N 226 LEU CA C sing N N 227 LEU CA CB sing N N 228 LEU CA HA sing N N 229 LEU C O doub N N 230 LEU C OXT sing N N 231 LEU CB CG sing N N 232 LEU CB HB2 sing N N 233 LEU CB HB3 sing N N 234 LEU CG CD1 sing N N 235 LEU CG CD2 sing N N 236 LEU CG HG sing N N 237 LEU CD1 HD11 sing N N 238 LEU CD1 HD12 sing N N 239 LEU CD1 HD13 sing N N 240 LEU CD2 HD21 sing N N 241 LEU CD2 HD22 sing N N 242 LEU CD2 HD23 sing N N 243 LEU OXT HXT sing N N 244 LYS N CA sing N N 245 LYS N H sing N N 246 LYS N H2 sing N N 247 LYS CA C sing N N 248 LYS CA CB sing N N 249 LYS CA HA sing N N 250 LYS C O doub N N 251 LYS C OXT sing N N 252 LYS CB CG sing N N 253 LYS CB HB2 sing N N 254 LYS CB HB3 sing N N 255 LYS CG CD sing N N 256 LYS CG HG2 sing N N 257 LYS CG HG3 sing N N 258 LYS CD CE sing N N 259 LYS CD HD2 sing N N 260 LYS CD HD3 sing N N 261 LYS CE NZ sing N N 262 LYS CE HE2 sing N N 263 LYS CE HE3 sing N N 264 LYS NZ HZ1 sing N N 265 LYS NZ HZ2 sing N N 266 LYS NZ HZ3 sing N N 267 LYS OXT HXT sing N N 268 MET N CA sing N N 269 MET N H sing N N 270 MET N H2 sing N N 271 MET CA C sing N N 272 MET CA CB sing N N 273 MET CA HA sing N N 274 MET C O doub N N 275 MET C OXT sing N N 276 MET CB CG sing N N 277 MET CB HB2 sing N N 278 MET CB HB3 sing N N 279 MET CG SD sing N N 280 MET CG HG2 sing N N 281 MET CG HG3 sing N N 282 MET SD CE sing N N 283 MET CE HE1 sing N N 284 MET CE HE2 sing N N 285 MET CE HE3 sing N N 286 MET OXT HXT sing N N 287 NO3 N O1 doub N N 288 NO3 N O2 sing N N 289 NO3 N O3 sing N N 290 PHE N CA sing N N 291 PHE N H sing N N 292 PHE N H2 sing N N 293 PHE CA C sing N N 294 PHE CA CB sing N N 295 PHE CA HA sing N N 296 PHE C O doub N N 297 PHE C OXT sing N N 298 PHE CB CG sing N N 299 PHE CB HB2 sing N N 300 PHE CB HB3 sing N N 301 PHE CG CD1 doub Y N 302 PHE CG CD2 sing Y N 303 PHE CD1 CE1 sing Y N 304 PHE CD1 HD1 sing N N 305 PHE CD2 CE2 doub Y N 306 PHE CD2 HD2 sing N N 307 PHE CE1 CZ doub Y N 308 PHE CE1 HE1 sing N N 309 PHE CE2 CZ sing Y N 310 PHE CE2 HE2 sing N N 311 PHE CZ HZ sing N N 312 PHE OXT HXT sing N N 313 PRO N CA sing N N 314 PRO N CD sing N N 315 PRO N H sing N N 316 PRO CA C sing N N 317 PRO CA CB sing N N 318 PRO CA HA sing N N 319 PRO C O doub N N 320 PRO C OXT sing N N 321 PRO CB CG sing N N 322 PRO CB HB2 sing N N 323 PRO CB HB3 sing N N 324 PRO CG CD sing N N 325 PRO CG HG2 sing N N 326 PRO CG HG3 sing N N 327 PRO CD HD2 sing N N 328 PRO CD HD3 sing N N 329 PRO OXT HXT sing N N 330 SER N CA sing N N 331 SER N H sing N N 332 SER N H2 sing N N 333 SER CA C sing N N 334 SER CA CB sing N N 335 SER CA HA sing N N 336 SER C O doub N N 337 SER C OXT sing N N 338 SER CB OG sing N N 339 SER CB HB2 sing N N 340 SER CB HB3 sing N N 341 SER OG HG sing N N 342 SER OXT HXT sing N N 343 THR N CA sing N N 344 THR N H sing N N 345 THR N H2 sing N N 346 THR CA C sing N N 347 THR CA CB sing N N 348 THR CA HA sing N N 349 THR C O doub N N 350 THR C OXT sing N N 351 THR CB OG1 sing N N 352 THR CB CG2 sing N N 353 THR CB HB sing N N 354 THR OG1 HG1 sing N N 355 THR CG2 HG21 sing N N 356 THR CG2 HG22 sing N N 357 THR CG2 HG23 sing N N 358 THR OXT HXT sing N N 359 TRP N CA sing N N 360 TRP N H sing N N 361 TRP N H2 sing N N 362 TRP CA C sing N N 363 TRP CA CB sing N N 364 TRP CA HA sing N N 365 TRP C O doub N N 366 TRP C OXT sing N N 367 TRP CB CG sing N N 368 TRP CB HB2 sing N N 369 TRP CB HB3 sing N N 370 TRP CG CD1 doub Y N 371 TRP CG CD2 sing Y N 372 TRP CD1 NE1 sing Y N 373 TRP CD1 HD1 sing N N 374 TRP CD2 CE2 doub Y N 375 TRP CD2 CE3 sing Y N 376 TRP NE1 CE2 sing Y N 377 TRP NE1 HE1 sing N N 378 TRP CE2 CZ2 sing Y N 379 TRP CE3 CZ3 doub Y N 380 TRP CE3 HE3 sing N N 381 TRP CZ2 CH2 doub Y N 382 TRP CZ2 HZ2 sing N N 383 TRP CZ3 CH2 sing Y N 384 TRP CZ3 HZ3 sing N N 385 TRP CH2 HH2 sing N N 386 TRP OXT HXT sing N N 387 TYR N CA sing N N 388 TYR N H sing N N 389 TYR N H2 sing N N 390 TYR CA C sing N N 391 TYR CA CB sing N N 392 TYR CA HA sing N N 393 TYR C O doub N N 394 TYR C OXT sing N N 395 TYR CB CG sing N N 396 TYR CB HB2 sing N N 397 TYR CB HB3 sing N N 398 TYR CG CD1 doub Y N 399 TYR CG CD2 sing Y N 400 TYR CD1 CE1 sing Y N 401 TYR CD1 HD1 sing N N 402 TYR CD2 CE2 doub Y N 403 TYR CD2 HD2 sing N N 404 TYR CE1 CZ doub Y N 405 TYR CE1 HE1 sing N N 406 TYR CE2 CZ sing Y N 407 TYR CE2 HE2 sing N N 408 TYR CZ OH sing N N 409 TYR OH HH sing N N 410 TYR OXT HXT sing N N 411 VAL N CA sing N N 412 VAL N H sing N N 413 VAL N H2 sing N N 414 VAL CA C sing N N 415 VAL CA CB sing N N 416 VAL CA HA sing N N 417 VAL C O doub N N 418 VAL C OXT sing N N 419 VAL CB CG1 sing N N 420 VAL CB CG2 sing N N 421 VAL CB HB sing N N 422 VAL CG1 HG11 sing N N 423 VAL CG1 HG12 sing N N 424 VAL CG1 HG13 sing N N 425 VAL CG2 HG21 sing N N 426 VAL CG2 HG22 sing N N 427 VAL CG2 HG23 sing N N 428 VAL OXT HXT sing N N 429 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id 8PX _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id 8PX _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _atom_sites.entry_id 5Y8Y _atom_sites.fract_transf_matrix[1][1] 0.028885 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021173 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012737 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol BR C N O S # loop_