data_5YC5 # _entry.id 5YC5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5YC5 pdb_00005yc5 10.2210/pdb5yc5/pdb WWPDB D_1300005018 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5YC5 _pdbx_database_status.recvd_initial_deposition_date 2017-09-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Caaveiro, J.M.M.' 1 0000-0001-5568-2369 'Tamura, H.' 2 ? 'Tsumoto, K.' 3 ? 'Kiyoshi, M.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Sci Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2045-2322 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 8 _citation.language ? _citation.page_first 3955 _citation.page_last 3955 _citation.title ;Assessing the Heterogeneity of the Fc-Glycan of a Therapeutic Antibody Using an engineered Fc gamma Receptor IIIa-Immobilized Column. ; _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41598-018-22199-8 _citation.pdbx_database_id_PubMed 29500371 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kiyoshi, M.' 1 ? primary 'Caaveiro, J.M.M.' 2 ? primary 'Tada, M.' 3 ? primary 'Tamura, H.' 4 ? primary 'Tanaka, T.' 5 ? primary 'Terao, Y.' 6 ? primary 'Morante, K.' 7 ? primary 'Harazono, A.' 8 ? primary 'Hashii, N.' 9 ? primary 'Shibata, H.' 10 ? primary 'Kuroda, D.' 11 ? primary 'Nagatoishi, S.' 12 ? primary 'Oe, S.' 13 ? primary 'Ide, T.' 14 ? primary 'Tsumoto, K.' 15 ? primary 'Ishii-Watabe, A.' 16 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5YC5 _cell.details ? _cell.formula_units_Z ? _cell.length_a 72.790 _cell.length_a_esd ? _cell.length_b 101.420 _cell.length_b_esd ? _cell.length_c 122.600 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5YC5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Immunoglobulin gamma-1 heavy chain' 25106.400 2 ? ? 'Fc fragment, UNP residues 226-448' ? 2 polymer man 'Low affinity immunoglobulin gamma Fc region receptor III-A' 20727.025 1 ? 'V27E, F29I, Y35N, Q48R, F75L, N92S, V117E, E121G, F171S' 'UNP residues 19-193' ? 3 branched man ;beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 1625.490 1 ? ? ? ? 4 branched man ;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 1463.349 1 ? ? ? ? 5 non-polymer man 'CHLORIDE ION' 35.453 1 ? ? ? ? 6 water nat water 18.015 35 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Immunoglobulin gamma-1 heavy chain NIE' 2 'CD16a antigen,Fc-gamma RIII-alpha,FcRIIIa,FcR-10,IgG Fc receptor III-2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVV SVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWES NGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG ; ;HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVV SVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWES NGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG ; A,B ? 2 'polypeptide(L)' no no ;RTEDLPKAEVILEPQWNRVLEKDSVTLKCRGAYSPEDNSTQWFHNESLISSQASSYLIDAATVDDSGEYRCQTSLSTLSD PVQLEVHIGWLLLQAPRWEFKEGDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYSCRGLVGS KNVSSETVNITITQGGHHHHHH ; ;RTEDLPKAEVILEPQWNRVLEKDSVTLKCRGAYSPEDNSTQWFHNESLISSQASSYLIDAATVDDSGEYRCQTSLSTLSD PVQLEVHIGWLLLQAPRWEFKEGDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYSCRGLVGS KNVSSETVNITITQGGHHHHHH ; C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 THR n 1 3 CYS n 1 4 PRO n 1 5 PRO n 1 6 CYS n 1 7 PRO n 1 8 ALA n 1 9 PRO n 1 10 GLU n 1 11 LEU n 1 12 LEU n 1 13 GLY n 1 14 GLY n 1 15 PRO n 1 16 SER n 1 17 VAL n 1 18 PHE n 1 19 LEU n 1 20 PHE n 1 21 PRO n 1 22 PRO n 1 23 LYS n 1 24 PRO n 1 25 LYS n 1 26 ASP n 1 27 THR n 1 28 LEU n 1 29 MET n 1 30 ILE n 1 31 SER n 1 32 ARG n 1 33 THR n 1 34 PRO n 1 35 GLU n 1 36 VAL n 1 37 THR n 1 38 CYS n 1 39 VAL n 1 40 VAL n 1 41 VAL n 1 42 ASP n 1 43 VAL n 1 44 SER n 1 45 HIS n 1 46 GLU n 1 47 ASP n 1 48 PRO n 1 49 GLU n 1 50 VAL n 1 51 LYS n 1 52 PHE n 1 53 ASN n 1 54 TRP n 1 55 TYR n 1 56 VAL n 1 57 ASP n 1 58 GLY n 1 59 VAL n 1 60 GLU n 1 61 VAL n 1 62 HIS n 1 63 ASN n 1 64 ALA n 1 65 LYS n 1 66 THR n 1 67 LYS n 1 68 PRO n 1 69 ARG n 1 70 GLU n 1 71 GLU n 1 72 GLN n 1 73 TYR n 1 74 ASN n 1 75 SER n 1 76 THR n 1 77 TYR n 1 78 ARG n 1 79 VAL n 1 80 VAL n 1 81 SER n 1 82 VAL n 1 83 LEU n 1 84 THR n 1 85 VAL n 1 86 LEU n 1 87 HIS n 1 88 GLN n 1 89 ASP n 1 90 TRP n 1 91 LEU n 1 92 ASN n 1 93 GLY n 1 94 LYS n 1 95 GLU n 1 96 TYR n 1 97 LYS n 1 98 CYS n 1 99 LYS n 1 100 VAL n 1 101 SER n 1 102 ASN n 1 103 LYS n 1 104 ALA n 1 105 LEU n 1 106 PRO n 1 107 ALA n 1 108 PRO n 1 109 ILE n 1 110 GLU n 1 111 LYS n 1 112 THR n 1 113 ILE n 1 114 SER n 1 115 LYS n 1 116 ALA n 1 117 LYS n 1 118 GLY n 1 119 GLN n 1 120 PRO n 1 121 ARG n 1 122 GLU n 1 123 PRO n 1 124 GLN n 1 125 VAL n 1 126 TYR n 1 127 THR n 1 128 LEU n 1 129 PRO n 1 130 PRO n 1 131 SER n 1 132 ARG n 1 133 ASP n 1 134 GLU n 1 135 LEU n 1 136 THR n 1 137 LYS n 1 138 ASN n 1 139 GLN n 1 140 VAL n 1 141 SER n 1 142 LEU n 1 143 THR n 1 144 CYS n 1 145 LEU n 1 146 VAL n 1 147 LYS n 1 148 GLY n 1 149 PHE n 1 150 TYR n 1 151 PRO n 1 152 SER n 1 153 ASP n 1 154 ILE n 1 155 ALA n 1 156 VAL n 1 157 GLU n 1 158 TRP n 1 159 GLU n 1 160 SER n 1 161 ASN n 1 162 GLY n 1 163 GLN n 1 164 PRO n 1 165 GLU n 1 166 ASN n 1 167 ASN n 1 168 TYR n 1 169 LYS n 1 170 THR n 1 171 THR n 1 172 PRO n 1 173 PRO n 1 174 VAL n 1 175 LEU n 1 176 ASP n 1 177 SER n 1 178 ASP n 1 179 GLY n 1 180 SER n 1 181 PHE n 1 182 PHE n 1 183 LEU n 1 184 TYR n 1 185 SER n 1 186 LYS n 1 187 LEU n 1 188 THR n 1 189 VAL n 1 190 ASP n 1 191 LYS n 1 192 SER n 1 193 ARG n 1 194 TRP n 1 195 GLN n 1 196 GLN n 1 197 GLY n 1 198 ASN n 1 199 VAL n 1 200 PHE n 1 201 SER n 1 202 CYS n 1 203 SER n 1 204 VAL n 1 205 MET n 1 206 HIS n 1 207 GLU n 1 208 ALA n 1 209 LEU n 1 210 HIS n 1 211 ASN n 1 212 HIS n 1 213 TYR n 1 214 THR n 1 215 GLN n 1 216 LYS n 1 217 SER n 1 218 LEU n 1 219 SER n 1 220 LEU n 1 221 SER n 1 222 PRO n 1 223 GLY n 2 1 ARG n 2 2 THR n 2 3 GLU n 2 4 ASP n 2 5 LEU n 2 6 PRO n 2 7 LYS n 2 8 ALA n 2 9 GLU n 2 10 VAL n 2 11 ILE n 2 12 LEU n 2 13 GLU n 2 14 PRO n 2 15 GLN n 2 16 TRP n 2 17 ASN n 2 18 ARG n 2 19 VAL n 2 20 LEU n 2 21 GLU n 2 22 LYS n 2 23 ASP n 2 24 SER n 2 25 VAL n 2 26 THR n 2 27 LEU n 2 28 LYS n 2 29 CYS n 2 30 ARG n 2 31 GLY n 2 32 ALA n 2 33 TYR n 2 34 SER n 2 35 PRO n 2 36 GLU n 2 37 ASP n 2 38 ASN n 2 39 SER n 2 40 THR n 2 41 GLN n 2 42 TRP n 2 43 PHE n 2 44 HIS n 2 45 ASN n 2 46 GLU n 2 47 SER n 2 48 LEU n 2 49 ILE n 2 50 SER n 2 51 SER n 2 52 GLN n 2 53 ALA n 2 54 SER n 2 55 SER n 2 56 TYR n 2 57 LEU n 2 58 ILE n 2 59 ASP n 2 60 ALA n 2 61 ALA n 2 62 THR n 2 63 VAL n 2 64 ASP n 2 65 ASP n 2 66 SER n 2 67 GLY n 2 68 GLU n 2 69 TYR n 2 70 ARG n 2 71 CYS n 2 72 GLN n 2 73 THR n 2 74 SER n 2 75 LEU n 2 76 SER n 2 77 THR n 2 78 LEU n 2 79 SER n 2 80 ASP n 2 81 PRO n 2 82 VAL n 2 83 GLN n 2 84 LEU n 2 85 GLU n 2 86 VAL n 2 87 HIS n 2 88 ILE n 2 89 GLY n 2 90 TRP n 2 91 LEU n 2 92 LEU n 2 93 LEU n 2 94 GLN n 2 95 ALA n 2 96 PRO n 2 97 ARG n 2 98 TRP n 2 99 GLU n 2 100 PHE n 2 101 LYS n 2 102 GLU n 2 103 GLY n 2 104 ASP n 2 105 PRO n 2 106 ILE n 2 107 HIS n 2 108 LEU n 2 109 ARG n 2 110 CYS n 2 111 HIS n 2 112 SER n 2 113 TRP n 2 114 LYS n 2 115 ASN n 2 116 THR n 2 117 ALA n 2 118 LEU n 2 119 HIS n 2 120 LYS n 2 121 VAL n 2 122 THR n 2 123 TYR n 2 124 LEU n 2 125 GLN n 2 126 ASN n 2 127 GLY n 2 128 LYS n 2 129 GLY n 2 130 ARG n 2 131 LYS n 2 132 TYR n 2 133 PHE n 2 134 HIS n 2 135 HIS n 2 136 ASN n 2 137 SER n 2 138 ASP n 2 139 PHE n 2 140 TYR n 2 141 ILE n 2 142 PRO n 2 143 LYS n 2 144 ALA n 2 145 THR n 2 146 LEU n 2 147 LYS n 2 148 ASP n 2 149 SER n 2 150 GLY n 2 151 SER n 2 152 TYR n 2 153 SER n 2 154 CYS n 2 155 ARG n 2 156 GLY n 2 157 LEU n 2 158 VAL n 2 159 GLY n 2 160 SER n 2 161 LYS n 2 162 ASN n 2 163 VAL n 2 164 SER n 2 165 SER n 2 166 GLU n 2 167 THR n 2 168 VAL n 2 169 ASN n 2 170 ILE n 2 171 THR n 2 172 ILE n 2 173 THR n 2 174 GLN n 2 175 GLY n 2 176 GLY n 2 177 HIS n 2 178 HIS n 2 179 HIS n 2 180 HIS n 2 181 HIS n 2 182 HIS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 223 Human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? unidentified 32644 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 'PURCHASED FROM ROCHE' ? ? ? ? 2 1 sample 'Biological sequence' 1 182 Human ? 'FCGR3A, CD16A, FCG3, FCGR3, IGFR3' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? Plasmid ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP IGG1_HUMAN P0DOX5 ? 1 ;HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVV SVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWES NGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG ; 226 2 UNP FCG3A_HUMAN P08637 ? 2 ;RTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSD PVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGS KNVSSETVNITITQG ; 19 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5YC5 A 1 ? 223 ? P0DOX5 226 ? 448 ? 224 446 2 1 5YC5 B 1 ? 223 ? P0DOX5 226 ? 448 ? 224 446 3 2 5YC5 C 1 ? 175 ? P08637 19 ? 193 ? 1 175 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 3 5YC5 GLU C 9 ? UNP P08637 VAL 27 'engineered mutation' 9 1 3 5YC5 ILE C 11 ? UNP P08637 PHE 29 'engineered mutation' 11 2 3 5YC5 ASN C 17 ? UNP P08637 TYR 35 'engineered mutation' 17 3 3 5YC5 ARG C 30 ? UNP P08637 GLN 48 'engineered mutation' 30 4 3 5YC5 LEU C 57 ? UNP P08637 PHE 75 'engineered mutation' 57 5 3 5YC5 SER C 74 ? UNP P08637 ASN 92 'engineered mutation' 74 6 3 5YC5 GLU C 99 ? UNP P08637 VAL 117 'engineered mutation' 99 7 3 5YC5 GLY C 103 ? UNP P08637 GLU 121 'engineered mutation' 103 8 3 5YC5 SER C 153 ? UNP P08637 PHE 171 'engineered mutation' 153 9 3 5YC5 VAL C 158 ? UNP P08637 PHE 176 variant 158 10 3 5YC5 GLY C 176 ? UNP P08637 ? ? 'expression tag' 176 11 3 5YC5 HIS C 177 ? UNP P08637 ? ? 'expression tag' 177 12 3 5YC5 HIS C 178 ? UNP P08637 ? ? 'expression tag' 178 13 3 5YC5 HIS C 179 ? UNP P08637 ? ? 'expression tag' 179 14 3 5YC5 HIS C 180 ? UNP P08637 ? ? 'expression tag' 180 15 3 5YC5 HIS C 181 ? UNP P08637 ? ? 'expression tag' 181 16 3 5YC5 HIS C 182 ? UNP P08637 ? ? 'expression tag' 182 17 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5YC5 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.19 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 61.44 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.4 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20mM Tris-HCl, 100mM NaCl, 14% PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-12-08 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-5A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL-5A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5YC5 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.71 _reflns.d_resolution_low 46.9 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 25395 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.9 _reflns.pdbx_Rmerge_I_obs 0.121 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.058 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.995 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.71 _reflns_shell.d_res_low 2.84 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 3324 _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.848 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 6.2 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.370 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.842 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 5.58 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] -3.76 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] -1.83 _refine.B_iso_max ? _refine.B_iso_mean 54.098 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.937 _refine.correlation_coeff_Fo_to_Fc_free 0.889 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5YC5 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.71 _refine.ls_d_res_low 46.9 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 24076 _refine.ls_number_reflns_R_free 1260 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.93 _refine.ls_percent_reflns_R_free 5.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.21197 _refine.ls_R_factor_R_free 0.27294 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.20870 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3AY4 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.635 _refine.pdbx_overall_ESU_R_Free 0.343 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 37.723 _refine.overall_SU_ML 0.324 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 4750 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 210 _refine_hist.number_atoms_solvent 35 _refine_hist.number_atoms_total 4995 _refine_hist.d_res_high 2.71 _refine_hist.d_res_low 46.9 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.016 0.019 5109 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 4549 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.984 2.002 6984 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.063 3.000 10701 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 7.584 5.000 592 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 39.606 24.840 219 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 18.154 15.000 827 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 18.009 15.000 19 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.099 0.200 815 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 0.021 5388 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 941 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 1.519 3.643 2377 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.519 3.642 2376 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.480 5.458 2966 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 2.479 5.459 2967 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 1.638 3.854 2732 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 1.637 3.852 2730 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 2.709 5.713 4018 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 4.043 41.426 5186 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 4.039 41.429 5185 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.709 _refine_ls_shell.d_res_low 2.779 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 79 _refine_ls_shell.number_reflns_R_work 1773 _refine_ls_shell.percent_reflns_obs 99.95 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.402 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.377 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5YC5 _struct.title 'Crystal structure of human IgG-Fc in complex with aglycan and optimized Fc gamma receptor IIIa' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5YC5 _struct_keywords.text 'Immunoglobulin G; Fc receptor; Affinity chromatography; Protein glycosylation; Calorimetry; Protein dynamics, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? I N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 23 ? MET A 29 ? LYS A 246 MET A 252 1 ? 7 HELX_P HELX_P2 AA2 LEU A 86 ? ASN A 92 ? LEU A 309 ASN A 315 1 ? 7 HELX_P HELX_P3 AA3 SER A 131 ? LYS A 137 ? SER A 354 LYS A 360 5 ? 7 HELX_P HELX_P4 AA4 LYS A 191 ? GLN A 196 ? LYS A 414 GLN A 419 1 ? 6 HELX_P HELX_P5 AA5 LEU A 209 ? TYR A 213 ? LEU A 432 TYR A 436 5 ? 5 HELX_P HELX_P6 AA6 LYS B 23 ? MET B 29 ? LYS B 246 MET B 252 1 ? 7 HELX_P HELX_P7 AA7 LEU B 86 ? ASN B 92 ? LEU B 309 ASN B 315 1 ? 7 HELX_P HELX_P8 AA8 SER B 131 ? LEU B 135 ? SER B 354 LEU B 358 5 ? 5 HELX_P HELX_P9 AA9 LYS B 191 ? GLN B 196 ? LYS B 414 GLN B 419 1 ? 6 HELX_P HELX_P10 AB1 LEU B 209 ? ASN B 211 ? LEU B 432 ASN B 434 5 ? 3 HELX_P HELX_P11 AB2 THR C 62 ? SER C 66 ? THR C 62 SER C 66 5 ? 5 HELX_P HELX_P12 AB3 LYS C 114 ? THR C 116 ? LYS C 114 THR C 116 5 ? 3 HELX_P HELX_P13 AB4 THR C 145 ? SER C 149 ? THR C 145 SER C 149 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 38 SG ? ? ? 1_555 A CYS 98 SG ? ? A CYS 261 A CYS 321 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf2 disulf ? ? A CYS 144 SG ? ? ? 1_555 A CYS 202 SG ? ? A CYS 367 A CYS 425 1_555 ? ? ? ? ? ? ? 2.009 ? ? disulf3 disulf ? ? B CYS 38 SG ? ? ? 1_555 B CYS 98 SG ? ? B CYS 261 B CYS 321 1_555 ? ? ? ? ? ? ? 1.991 ? ? disulf4 disulf ? ? B CYS 144 SG ? ? ? 1_555 B CYS 202 SG ? ? B CYS 367 B CYS 425 1_555 ? ? ? ? ? ? ? 2.061 ? ? disulf5 disulf ? ? C CYS 29 SG ? ? ? 1_555 C CYS 71 SG ? ? C CYS 29 C CYS 71 1_555 ? ? ? ? ? ? ? 1.997 ? ? disulf6 disulf ? ? C CYS 110 SG ? ? ? 1_555 C CYS 154 SG ? ? C CYS 110 C CYS 154 1_555 ? ? ? ? ? ? ? 2.056 ? ? covale1 covale one ? A ASN 74 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 297 D NAG 1 1_555 ? ? ? ? ? ? ? 1.449 ? N-Glycosylation covale2 covale one ? B ASN 74 ND2 ? ? ? 1_555 E NAG . C1 ? ? B ASN 297 E NAG 1 1_555 ? ? ? ? ? ? ? 1.434 ? N-Glycosylation covale3 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? D NAG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.452 ? ? covale4 covale both ? D NAG . O6 ? ? ? 1_555 D FUC . C1 ? ? D NAG 1 D FUC 9 1_555 ? ? ? ? ? ? ? 1.432 ? ? covale5 covale both ? D NAG . O4 ? ? ? 1_555 D BMA . C1 ? ? D NAG 2 D BMA 3 1_555 ? ? ? ? ? ? ? 1.431 ? ? covale6 covale both ? D BMA . O6 ? ? ? 1_555 D MAN . C1 ? ? D BMA 3 D MAN 4 1_555 ? ? ? ? ? ? ? 1.409 ? ? covale7 covale both ? D BMA . O3 ? ? ? 1_555 D MAN . C1 ? ? D BMA 3 D MAN 7 1_555 ? ? ? ? ? ? ? 1.462 ? ? covale8 covale both ? D MAN . O2 ? ? ? 1_555 D NAG . C1 ? ? D MAN 4 D NAG 5 1_555 ? ? ? ? ? ? ? 1.436 ? ? covale9 covale both ? D NAG . O4 ? ? ? 1_555 D GAL . C1 ? ? D NAG 5 D GAL 6 1_555 ? ? ? ? ? ? ? 1.442 ? ? covale10 covale both ? D MAN . O2 ? ? ? 1_555 D NAG . C1 ? ? D MAN 7 D NAG 8 1_555 ? ? ? ? ? ? ? 1.458 ? ? covale11 covale both ? E NAG . O4 ? ? ? 1_555 E NAG . C1 ? ? E NAG 1 E NAG 2 1_555 ? ? ? ? ? ? ? 1.462 ? ? covale12 covale both ? E NAG . O6 ? ? ? 1_555 E FUC . C1 ? ? E NAG 1 E FUC 8 1_555 ? ? ? ? ? ? ? 1.428 ? ? covale13 covale both ? E NAG . O4 ? ? ? 1_555 E BMA . C1 ? ? E NAG 2 E BMA 3 1_555 ? ? ? ? ? ? ? 1.424 ? ? covale14 covale both ? E BMA . O3 ? ? ? 1_555 E MAN . C1 ? ? E BMA 3 E MAN 4 1_555 ? ? ? ? ? ? ? 1.419 ? ? covale15 covale both ? E BMA . O6 ? ? ? 1_555 E MAN . C1 ? ? E BMA 3 E MAN 6 1_555 ? ? ? ? ? ? ? 1.442 ? ? covale16 covale both ? E MAN . O2 ? ? ? 1_555 E NAG . C1 ? ? E MAN 4 E NAG 5 1_555 ? ? ? ? ? ? ? 1.431 ? ? covale17 covale both ? E MAN . O2 ? ? ? 1_555 E NAG . C1 ? ? E MAN 6 E NAG 7 1_555 ? ? ? ? ? ? ? 1.452 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 150 A . ? TYR 373 A PRO 151 A ? PRO 374 A 1 -5.45 2 TYR 150 B . ? TYR 373 B PRO 151 B ? PRO 374 B 1 -13.35 3 GLU 13 C . ? GLU 13 C PRO 14 C ? PRO 14 C 1 -2.64 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? AA3 ? 4 ? AA4 ? 4 ? AA5 ? 4 ? AA6 ? 4 ? AA7 ? 4 ? AA8 ? 4 ? AA9 ? 4 ? AB1 ? 4 ? AB2 ? 4 ? AB3 ? 4 ? AB4 ? 3 ? AB5 ? 5 ? AB6 ? 3 ? AB7 ? 5 ? AB8 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel AA9 1 2 ? anti-parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel AB1 1 2 ? anti-parallel AB1 2 3 ? anti-parallel AB1 3 4 ? anti-parallel AB2 1 2 ? anti-parallel AB2 2 3 ? anti-parallel AB2 3 4 ? anti-parallel AB3 1 2 ? anti-parallel AB3 2 3 ? anti-parallel AB3 3 4 ? anti-parallel AB4 1 2 ? anti-parallel AB4 2 3 ? anti-parallel AB5 1 2 ? parallel AB5 2 3 ? anti-parallel AB5 3 4 ? anti-parallel AB5 4 5 ? anti-parallel AB6 1 2 ? anti-parallel AB6 2 3 ? anti-parallel AB7 1 2 ? parallel AB7 2 3 ? anti-parallel AB7 3 4 ? anti-parallel AB7 4 5 ? anti-parallel AB8 1 2 ? parallel AB8 2 3 ? anti-parallel AB8 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 16 ? PHE A 20 ? SER A 239 PHE A 243 AA1 2 GLU A 35 ? VAL A 43 ? GLU A 258 VAL A 266 AA1 3 TYR A 77 ? THR A 84 ? TYR A 300 THR A 307 AA1 4 LYS A 65 ? THR A 66 ? LYS A 288 THR A 289 AA2 1 SER A 16 ? PHE A 20 ? SER A 239 PHE A 243 AA2 2 GLU A 35 ? VAL A 43 ? GLU A 258 VAL A 266 AA2 3 TYR A 77 ? THR A 84 ? TYR A 300 THR A 307 AA2 4 GLU A 70 ? GLU A 71 ? GLU A 293 GLU A 294 AA3 1 VAL A 59 ? VAL A 61 ? VAL A 282 VAL A 284 AA3 2 LYS A 51 ? VAL A 56 ? LYS A 274 VAL A 279 AA3 3 TYR A 96 ? SER A 101 ? TYR A 319 SER A 324 AA3 4 ILE A 109 ? ILE A 113 ? ILE A 332 ILE A 336 AA4 1 GLN A 124 ? LEU A 128 ? GLN A 347 LEU A 351 AA4 2 GLN A 139 ? PHE A 149 ? GLN A 362 PHE A 372 AA4 3 PHE A 181 ? ASP A 190 ? PHE A 404 ASP A 413 AA4 4 TYR A 168 ? THR A 170 ? TYR A 391 THR A 393 AA5 1 GLN A 124 ? LEU A 128 ? GLN A 347 LEU A 351 AA5 2 GLN A 139 ? PHE A 149 ? GLN A 362 PHE A 372 AA5 3 PHE A 181 ? ASP A 190 ? PHE A 404 ASP A 413 AA5 4 VAL A 174 ? LEU A 175 ? VAL A 397 LEU A 398 AA6 1 GLN A 163 ? PRO A 164 ? GLN A 386 PRO A 387 AA6 2 ALA A 155 ? SER A 160 ? ALA A 378 SER A 383 AA6 3 PHE A 200 ? MET A 205 ? PHE A 423 MET A 428 AA6 4 THR A 214 ? LEU A 218 ? THR A 437 LEU A 441 AA7 1 SER B 16 ? PHE B 20 ? SER B 239 PHE B 243 AA7 2 GLU B 35 ? VAL B 43 ? GLU B 258 VAL B 266 AA7 3 TYR B 77 ? THR B 84 ? TYR B 300 THR B 307 AA7 4 LYS B 65 ? THR B 66 ? LYS B 288 THR B 289 AA8 1 SER B 16 ? PHE B 20 ? SER B 239 PHE B 243 AA8 2 GLU B 35 ? VAL B 43 ? GLU B 258 VAL B 266 AA8 3 TYR B 77 ? THR B 84 ? TYR B 300 THR B 307 AA8 4 GLU B 70 ? GLU B 71 ? GLU B 293 GLU B 294 AA9 1 VAL B 59 ? VAL B 61 ? VAL B 282 VAL B 284 AA9 2 LYS B 51 ? VAL B 56 ? LYS B 274 VAL B 279 AA9 3 TYR B 96 ? SER B 101 ? TYR B 319 SER B 324 AA9 4 ILE B 109 ? ILE B 113 ? ILE B 332 ILE B 336 AB1 1 GLN B 124 ? LEU B 128 ? GLN B 347 LEU B 351 AB1 2 GLN B 139 ? PHE B 149 ? GLN B 362 PHE B 372 AB1 3 PHE B 181 ? ASP B 190 ? PHE B 404 ASP B 413 AB1 4 TYR B 168 ? THR B 170 ? TYR B 391 THR B 393 AB2 1 GLN B 124 ? LEU B 128 ? GLN B 347 LEU B 351 AB2 2 GLN B 139 ? PHE B 149 ? GLN B 362 PHE B 372 AB2 3 PHE B 181 ? ASP B 190 ? PHE B 404 ASP B 413 AB2 4 VAL B 174 ? LEU B 175 ? VAL B 397 LEU B 398 AB3 1 GLN B 163 ? PRO B 164 ? GLN B 386 PRO B 387 AB3 2 ALA B 155 ? SER B 160 ? ALA B 378 SER B 383 AB3 3 PHE B 200 ? MET B 205 ? PHE B 423 MET B 428 AB3 4 TYR B 213 ? LEU B 218 ? TYR B 436 LEU B 441 AB4 1 GLU C 9 ? GLU C 13 ? GLU C 9 GLU C 13 AB4 2 VAL C 25 ? ARG C 30 ? VAL C 25 ARG C 30 AB4 3 SER C 55 ? ILE C 58 ? SER C 55 ILE C 58 AB5 1 ARG C 18 ? LEU C 20 ? ARG C 18 LEU C 20 AB5 2 VAL C 82 ? HIS C 87 ? VAL C 82 HIS C 87 AB5 3 GLY C 67 ? THR C 73 ? GLY C 67 THR C 73 AB5 4 THR C 40 ? HIS C 44 ? THR C 40 HIS C 44 AB5 5 SER C 47 ? ILE C 49 ? SER C 47 ILE C 49 AB6 1 LEU C 91 ? GLN C 94 ? LEU C 91 GLN C 94 AB6 2 ILE C 106 ? SER C 112 ? ILE C 106 SER C 112 AB6 3 PHE C 139 ? ILE C 141 ? PHE C 139 ILE C 141 AB7 1 GLU C 99 ? LYS C 101 ? GLU C 99 LYS C 101 AB7 2 VAL C 168 ? THR C 173 ? VAL C 168 THR C 173 AB7 3 GLY C 150 ? VAL C 158 ? GLY C 150 VAL C 158 AB7 4 HIS C 119 ? GLN C 125 ? HIS C 119 GLN C 125 AB7 5 LYS C 128 ? HIS C 135 ? LYS C 128 HIS C 135 AB8 1 GLU C 99 ? LYS C 101 ? GLU C 99 LYS C 101 AB8 2 VAL C 168 ? THR C 173 ? VAL C 168 THR C 173 AB8 3 GLY C 150 ? VAL C 158 ? GLY C 150 VAL C 158 AB8 4 LYS C 161 ? SER C 164 ? LYS C 161 SER C 164 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE A 18 ? N PHE A 241 O VAL A 39 ? O VAL A 262 AA1 2 3 N CYS A 38 ? N CYS A 261 O SER A 81 ? O SER A 304 AA1 3 4 O VAL A 82 ? O VAL A 305 N LYS A 65 ? N LYS A 288 AA2 1 2 N PHE A 18 ? N PHE A 241 O VAL A 39 ? O VAL A 262 AA2 2 3 N CYS A 38 ? N CYS A 261 O SER A 81 ? O SER A 304 AA2 3 4 O ARG A 78 ? O ARG A 301 N GLU A 70 ? N GLU A 293 AA3 1 2 O VAL A 59 ? O VAL A 282 N VAL A 56 ? N VAL A 279 AA3 2 3 N ASN A 53 ? N ASN A 276 O LYS A 99 ? O LYS A 322 AA3 3 4 N VAL A 100 ? N VAL A 323 O ILE A 109 ? O ILE A 332 AA4 1 2 N TYR A 126 ? N TYR A 349 O LEU A 145 ? O LEU A 368 AA4 2 3 N LEU A 142 ? N LEU A 365 O LEU A 187 ? O LEU A 410 AA4 3 4 O LYS A 186 ? O LYS A 409 N LYS A 169 ? N LYS A 392 AA5 1 2 N TYR A 126 ? N TYR A 349 O LEU A 145 ? O LEU A 368 AA5 2 3 N LEU A 142 ? N LEU A 365 O LEU A 187 ? O LEU A 410 AA5 3 4 O PHE A 182 ? O PHE A 405 N VAL A 174 ? N VAL A 397 AA6 1 2 O GLN A 163 ? O GLN A 386 N SER A 160 ? N SER A 383 AA6 2 3 N ALA A 155 ? N ALA A 378 O MET A 205 ? O MET A 428 AA6 3 4 N PHE A 200 ? N PHE A 423 O LEU A 218 ? O LEU A 441 AA7 1 2 N PHE B 20 ? N PHE B 243 O THR B 37 ? O THR B 260 AA7 2 3 N VAL B 40 ? N VAL B 263 O VAL B 79 ? O VAL B 302 AA7 3 4 O VAL B 82 ? O VAL B 305 N LYS B 65 ? N LYS B 288 AA8 1 2 N PHE B 20 ? N PHE B 243 O THR B 37 ? O THR B 260 AA8 2 3 N VAL B 40 ? N VAL B 263 O VAL B 79 ? O VAL B 302 AA8 3 4 O ARG B 78 ? O ARG B 301 N GLU B 70 ? N GLU B 293 AA9 1 2 O VAL B 61 ? O VAL B 284 N TRP B 54 ? N TRP B 277 AA9 2 3 N ASN B 53 ? N ASN B 276 O LYS B 99 ? O LYS B 322 AA9 3 4 N CYS B 98 ? N CYS B 321 O LYS B 111 ? O LYS B 334 AB1 1 2 N TYR B 126 ? N TYR B 349 O LEU B 145 ? O LEU B 368 AB1 2 3 N LEU B 142 ? N LEU B 365 O LEU B 187 ? O LEU B 410 AB1 3 4 O LYS B 186 ? O LYS B 409 N LYS B 169 ? N LYS B 392 AB2 1 2 N TYR B 126 ? N TYR B 349 O LEU B 145 ? O LEU B 368 AB2 2 3 N LEU B 142 ? N LEU B 365 O LEU B 187 ? O LEU B 410 AB2 3 4 O PHE B 182 ? O PHE B 405 N VAL B 174 ? N VAL B 397 AB3 1 2 O GLN B 163 ? O GLN B 386 N SER B 160 ? N SER B 383 AB3 2 3 N GLU B 159 ? N GLU B 382 O SER B 201 ? O SER B 424 AB3 3 4 N CYS B 202 ? N CYS B 425 O LYS B 216 ? O LYS B 439 AB4 1 2 N ILE C 11 ? N ILE C 11 O LYS C 28 ? O LYS C 28 AB4 2 3 N LEU C 27 ? N LEU C 27 O TYR C 56 ? O TYR C 56 AB5 1 2 N VAL C 19 ? N VAL C 19 O HIS C 87 ? O HIS C 87 AB5 2 3 O VAL C 82 ? O VAL C 82 N TYR C 69 ? N TYR C 69 AB5 3 4 O GLN C 72 ? O GLN C 72 N GLN C 41 ? N GLN C 41 AB5 4 5 N TRP C 42 ? N TRP C 42 O ILE C 49 ? O ILE C 49 AB6 1 2 N LEU C 92 ? N LEU C 92 O HIS C 111 ? O HIS C 111 AB6 2 3 N LEU C 108 ? N LEU C 108 O PHE C 139 ? O PHE C 139 AB7 1 2 N PHE C 100 ? N PHE C 100 O THR C 173 ? O THR C 173 AB7 2 3 O ILE C 170 ? O ILE C 170 N GLY C 150 ? N GLY C 150 AB7 3 4 O ARG C 155 ? O ARG C 155 N THR C 122 ? N THR C 122 AB7 4 5 N TYR C 123 ? N TYR C 123 O ARG C 130 ? O ARG C 130 AB8 1 2 N PHE C 100 ? N PHE C 100 O THR C 173 ? O THR C 173 AB8 2 3 O ILE C 170 ? O ILE C 170 N GLY C 150 ? N GLY C 150 AB8 3 4 N VAL C 158 ? N VAL C 158 O LYS C 161 ? O LYS C 161 # _atom_sites.entry_id 5YC5 _atom_sites.fract_transf_matrix[1][1] 0.013738 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009860 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008157 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 224 ? ? ? A . n A 1 2 THR 2 225 ? ? ? A . n A 1 3 CYS 3 226 ? ? ? A . n A 1 4 PRO 4 227 ? ? ? A . n A 1 5 PRO 5 228 ? ? ? A . n A 1 6 CYS 6 229 ? ? ? A . n A 1 7 PRO 7 230 ? ? ? A . n A 1 8 ALA 8 231 ? ? ? A . n A 1 9 PRO 9 232 ? ? ? A . n A 1 10 GLU 10 233 ? ? ? A . n A 1 11 LEU 11 234 234 LEU LEU A . n A 1 12 LEU 12 235 235 LEU LEU A . n A 1 13 GLY 13 236 236 GLY GLY A . n A 1 14 GLY 14 237 237 GLY GLY A . n A 1 15 PRO 15 238 238 PRO PRO A . n A 1 16 SER 16 239 239 SER SER A . n A 1 17 VAL 17 240 240 VAL VAL A . n A 1 18 PHE 18 241 241 PHE PHE A . n A 1 19 LEU 19 242 242 LEU LEU A . n A 1 20 PHE 20 243 243 PHE PHE A . n A 1 21 PRO 21 244 244 PRO PRO A . n A 1 22 PRO 22 245 245 PRO PRO A . n A 1 23 LYS 23 246 246 LYS LYS A . n A 1 24 PRO 24 247 247 PRO PRO A . n A 1 25 LYS 25 248 248 LYS LYS A . n A 1 26 ASP 26 249 249 ASP ASP A . n A 1 27 THR 27 250 250 THR THR A . n A 1 28 LEU 28 251 251 LEU LEU A . n A 1 29 MET 29 252 252 MET MET A . n A 1 30 ILE 30 253 253 ILE ILE A . n A 1 31 SER 31 254 254 SER SER A . n A 1 32 ARG 32 255 255 ARG ARG A . n A 1 33 THR 33 256 256 THR THR A . n A 1 34 PRO 34 257 257 PRO PRO A . n A 1 35 GLU 35 258 258 GLU GLU A . n A 1 36 VAL 36 259 259 VAL VAL A . n A 1 37 THR 37 260 260 THR THR A . n A 1 38 CYS 38 261 261 CYS CYS A . n A 1 39 VAL 39 262 262 VAL VAL A . n A 1 40 VAL 40 263 263 VAL VAL A . n A 1 41 VAL 41 264 264 VAL VAL A . n A 1 42 ASP 42 265 265 ASP ASP A . n A 1 43 VAL 43 266 266 VAL VAL A . n A 1 44 SER 44 267 267 SER SER A . n A 1 45 HIS 45 268 268 HIS HIS A . n A 1 46 GLU 46 269 269 GLU GLU A . n A 1 47 ASP 47 270 270 ASP ASP A . n A 1 48 PRO 48 271 271 PRO PRO A . n A 1 49 GLU 49 272 272 GLU GLU A . n A 1 50 VAL 50 273 273 VAL VAL A . n A 1 51 LYS 51 274 274 LYS LYS A . n A 1 52 PHE 52 275 275 PHE PHE A . n A 1 53 ASN 53 276 276 ASN ASN A . n A 1 54 TRP 54 277 277 TRP TRP A . n A 1 55 TYR 55 278 278 TYR TYR A . n A 1 56 VAL 56 279 279 VAL VAL A . n A 1 57 ASP 57 280 280 ASP ASP A . n A 1 58 GLY 58 281 281 GLY GLY A . n A 1 59 VAL 59 282 282 VAL VAL A . n A 1 60 GLU 60 283 283 GLU GLU A . n A 1 61 VAL 61 284 284 VAL VAL A . n A 1 62 HIS 62 285 285 HIS HIS A . n A 1 63 ASN 63 286 286 ASN ASN A . n A 1 64 ALA 64 287 287 ALA ALA A . n A 1 65 LYS 65 288 288 LYS LYS A . n A 1 66 THR 66 289 289 THR THR A . n A 1 67 LYS 67 290 290 LYS LYS A . n A 1 68 PRO 68 291 291 PRO PRO A . n A 1 69 ARG 69 292 292 ARG ARG A . n A 1 70 GLU 70 293 293 GLU GLU A . n A 1 71 GLU 71 294 294 GLU GLU A . n A 1 72 GLN 72 295 295 GLN GLN A . n A 1 73 TYR 73 296 296 TYR TYR A . n A 1 74 ASN 74 297 297 ASN ASN A . n A 1 75 SER 75 298 298 SER SER A . n A 1 76 THR 76 299 299 THR THR A . n A 1 77 TYR 77 300 300 TYR TYR A . n A 1 78 ARG 78 301 301 ARG ARG A . n A 1 79 VAL 79 302 302 VAL VAL A . n A 1 80 VAL 80 303 303 VAL VAL A . n A 1 81 SER 81 304 304 SER SER A . n A 1 82 VAL 82 305 305 VAL VAL A . n A 1 83 LEU 83 306 306 LEU LEU A . n A 1 84 THR 84 307 307 THR THR A . n A 1 85 VAL 85 308 308 VAL VAL A . n A 1 86 LEU 86 309 309 LEU LEU A . n A 1 87 HIS 87 310 310 HIS HIS A . n A 1 88 GLN 88 311 311 GLN GLN A . n A 1 89 ASP 89 312 312 ASP ASP A . n A 1 90 TRP 90 313 313 TRP TRP A . n A 1 91 LEU 91 314 314 LEU LEU A . n A 1 92 ASN 92 315 315 ASN ASN A . n A 1 93 GLY 93 316 316 GLY GLY A . n A 1 94 LYS 94 317 317 LYS LYS A . n A 1 95 GLU 95 318 318 GLU GLU A . n A 1 96 TYR 96 319 319 TYR TYR A . n A 1 97 LYS 97 320 320 LYS LYS A . n A 1 98 CYS 98 321 321 CYS CYS A . n A 1 99 LYS 99 322 322 LYS LYS A . n A 1 100 VAL 100 323 323 VAL VAL A . n A 1 101 SER 101 324 324 SER SER A . n A 1 102 ASN 102 325 325 ASN ASN A . n A 1 103 LYS 103 326 326 LYS LYS A . n A 1 104 ALA 104 327 327 ALA ALA A . n A 1 105 LEU 105 328 328 LEU LEU A . n A 1 106 PRO 106 329 329 PRO PRO A . n A 1 107 ALA 107 330 330 ALA ALA A . n A 1 108 PRO 108 331 331 PRO PRO A . n A 1 109 ILE 109 332 332 ILE ILE A . n A 1 110 GLU 110 333 333 GLU GLU A . n A 1 111 LYS 111 334 334 LYS LYS A . n A 1 112 THR 112 335 335 THR THR A . n A 1 113 ILE 113 336 336 ILE ILE A . n A 1 114 SER 114 337 337 SER SER A . n A 1 115 LYS 115 338 338 LYS LYS A . n A 1 116 ALA 116 339 339 ALA ALA A . n A 1 117 LYS 117 340 340 LYS LYS A . n A 1 118 GLY 118 341 341 GLY GLY A . n A 1 119 GLN 119 342 342 GLN GLN A . n A 1 120 PRO 120 343 343 PRO PRO A . n A 1 121 ARG 121 344 344 ARG ARG A . n A 1 122 GLU 122 345 345 GLU GLU A . n A 1 123 PRO 123 346 346 PRO PRO A . n A 1 124 GLN 124 347 347 GLN GLN A . n A 1 125 VAL 125 348 348 VAL VAL A . n A 1 126 TYR 126 349 349 TYR TYR A . n A 1 127 THR 127 350 350 THR THR A . n A 1 128 LEU 128 351 351 LEU LEU A . n A 1 129 PRO 129 352 352 PRO PRO A . n A 1 130 PRO 130 353 353 PRO PRO A . n A 1 131 SER 131 354 354 SER SER A . n A 1 132 ARG 132 355 355 ARG ARG A . n A 1 133 ASP 133 356 356 ASP ASP A . n A 1 134 GLU 134 357 357 GLU GLU A . n A 1 135 LEU 135 358 358 LEU LEU A . n A 1 136 THR 136 359 359 THR THR A . n A 1 137 LYS 137 360 360 LYS LYS A . n A 1 138 ASN 138 361 361 ASN ASN A . n A 1 139 GLN 139 362 362 GLN GLN A . n A 1 140 VAL 140 363 363 VAL VAL A . n A 1 141 SER 141 364 364 SER SER A . n A 1 142 LEU 142 365 365 LEU LEU A . n A 1 143 THR 143 366 366 THR THR A . n A 1 144 CYS 144 367 367 CYS CYS A . n A 1 145 LEU 145 368 368 LEU LEU A . n A 1 146 VAL 146 369 369 VAL VAL A . n A 1 147 LYS 147 370 370 LYS LYS A . n A 1 148 GLY 148 371 371 GLY GLY A . n A 1 149 PHE 149 372 372 PHE PHE A . n A 1 150 TYR 150 373 373 TYR TYR A . n A 1 151 PRO 151 374 374 PRO PRO A . n A 1 152 SER 152 375 375 SER SER A . n A 1 153 ASP 153 376 376 ASP ASP A . n A 1 154 ILE 154 377 377 ILE ILE A . n A 1 155 ALA 155 378 378 ALA ALA A . n A 1 156 VAL 156 379 379 VAL VAL A . n A 1 157 GLU 157 380 380 GLU GLU A . n A 1 158 TRP 158 381 381 TRP TRP A . n A 1 159 GLU 159 382 382 GLU GLU A . n A 1 160 SER 160 383 383 SER SER A . n A 1 161 ASN 161 384 384 ASN ASN A . n A 1 162 GLY 162 385 385 GLY GLY A . n A 1 163 GLN 163 386 386 GLN GLN A . n A 1 164 PRO 164 387 387 PRO PRO A . n A 1 165 GLU 165 388 388 GLU GLU A . n A 1 166 ASN 166 389 389 ASN ASN A . n A 1 167 ASN 167 390 390 ASN ASN A . n A 1 168 TYR 168 391 391 TYR TYR A . n A 1 169 LYS 169 392 392 LYS LYS A . n A 1 170 THR 170 393 393 THR THR A . n A 1 171 THR 171 394 394 THR THR A . n A 1 172 PRO 172 395 395 PRO PRO A . n A 1 173 PRO 173 396 396 PRO PRO A . n A 1 174 VAL 174 397 397 VAL VAL A . n A 1 175 LEU 175 398 398 LEU LEU A . n A 1 176 ASP 176 399 399 ASP ASP A . n A 1 177 SER 177 400 400 SER SER A . n A 1 178 ASP 178 401 401 ASP ASP A . n A 1 179 GLY 179 402 402 GLY GLY A . n A 1 180 SER 180 403 403 SER SER A . n A 1 181 PHE 181 404 404 PHE PHE A . n A 1 182 PHE 182 405 405 PHE PHE A . n A 1 183 LEU 183 406 406 LEU LEU A . n A 1 184 TYR 184 407 407 TYR TYR A . n A 1 185 SER 185 408 408 SER SER A . n A 1 186 LYS 186 409 409 LYS LYS A . n A 1 187 LEU 187 410 410 LEU LEU A . n A 1 188 THR 188 411 411 THR THR A . n A 1 189 VAL 189 412 412 VAL VAL A . n A 1 190 ASP 190 413 413 ASP ASP A . n A 1 191 LYS 191 414 414 LYS LYS A . n A 1 192 SER 192 415 415 SER SER A . n A 1 193 ARG 193 416 416 ARG ARG A . n A 1 194 TRP 194 417 417 TRP TRP A . n A 1 195 GLN 195 418 418 GLN GLN A . n A 1 196 GLN 196 419 419 GLN GLN A . n A 1 197 GLY 197 420 420 GLY GLY A . n A 1 198 ASN 198 421 421 ASN ASN A . n A 1 199 VAL 199 422 422 VAL VAL A . n A 1 200 PHE 200 423 423 PHE PHE A . n A 1 201 SER 201 424 424 SER SER A . n A 1 202 CYS 202 425 425 CYS CYS A . n A 1 203 SER 203 426 426 SER SER A . n A 1 204 VAL 204 427 427 VAL VAL A . n A 1 205 MET 205 428 428 MET MET A . n A 1 206 HIS 206 429 429 HIS HIS A . n A 1 207 GLU 207 430 430 GLU GLU A . n A 1 208 ALA 208 431 431 ALA ALA A . n A 1 209 LEU 209 432 432 LEU LEU A . n A 1 210 HIS 210 433 433 HIS HIS A . n A 1 211 ASN 211 434 434 ASN ASN A . n A 1 212 HIS 212 435 435 HIS HIS A . n A 1 213 TYR 213 436 436 TYR TYR A . n A 1 214 THR 214 437 437 THR THR A . n A 1 215 GLN 215 438 438 GLN GLN A . n A 1 216 LYS 216 439 439 LYS LYS A . n A 1 217 SER 217 440 440 SER SER A . n A 1 218 LEU 218 441 441 LEU LEU A . n A 1 219 SER 219 442 442 SER SER A . n A 1 220 LEU 220 443 443 LEU LEU A . n A 1 221 SER 221 444 444 SER SER A . n A 1 222 PRO 222 445 ? ? ? A . n A 1 223 GLY 223 446 ? ? ? A . n B 1 1 HIS 1 224 ? ? ? B . n B 1 2 THR 2 225 ? ? ? B . n B 1 3 CYS 3 226 ? ? ? B . n B 1 4 PRO 4 227 ? ? ? B . n B 1 5 PRO 5 228 ? ? ? B . n B 1 6 CYS 6 229 ? ? ? B . n B 1 7 PRO 7 230 ? ? ? B . n B 1 8 ALA 8 231 ? ? ? B . n B 1 9 PRO 9 232 232 PRO PRO B . n B 1 10 GLU 10 233 233 GLU GLU B . n B 1 11 LEU 11 234 234 LEU LEU B . n B 1 12 LEU 12 235 235 LEU LEU B . n B 1 13 GLY 13 236 236 GLY GLY B . n B 1 14 GLY 14 237 237 GLY GLY B . n B 1 15 PRO 15 238 238 PRO PRO B . n B 1 16 SER 16 239 239 SER SER B . n B 1 17 VAL 17 240 240 VAL VAL B . n B 1 18 PHE 18 241 241 PHE PHE B . n B 1 19 LEU 19 242 242 LEU LEU B . n B 1 20 PHE 20 243 243 PHE PHE B . n B 1 21 PRO 21 244 244 PRO PRO B . n B 1 22 PRO 22 245 245 PRO PRO B . n B 1 23 LYS 23 246 246 LYS LYS B . n B 1 24 PRO 24 247 247 PRO PRO B . n B 1 25 LYS 25 248 248 LYS LYS B . n B 1 26 ASP 26 249 249 ASP ASP B . n B 1 27 THR 27 250 250 THR THR B . n B 1 28 LEU 28 251 251 LEU LEU B . n B 1 29 MET 29 252 252 MET MET B . n B 1 30 ILE 30 253 253 ILE ILE B . n B 1 31 SER 31 254 254 SER SER B . n B 1 32 ARG 32 255 255 ARG ARG B . n B 1 33 THR 33 256 256 THR THR B . n B 1 34 PRO 34 257 257 PRO PRO B . n B 1 35 GLU 35 258 258 GLU GLU B . n B 1 36 VAL 36 259 259 VAL VAL B . n B 1 37 THR 37 260 260 THR THR B . n B 1 38 CYS 38 261 261 CYS CYS B . n B 1 39 VAL 39 262 262 VAL VAL B . n B 1 40 VAL 40 263 263 VAL VAL B . n B 1 41 VAL 41 264 264 VAL VAL B . n B 1 42 ASP 42 265 265 ASP ASP B . n B 1 43 VAL 43 266 266 VAL VAL B . n B 1 44 SER 44 267 267 SER SER B . n B 1 45 HIS 45 268 268 HIS HIS B . n B 1 46 GLU 46 269 269 GLU GLU B . n B 1 47 ASP 47 270 270 ASP ASP B . n B 1 48 PRO 48 271 271 PRO PRO B . n B 1 49 GLU 49 272 272 GLU GLU B . n B 1 50 VAL 50 273 273 VAL VAL B . n B 1 51 LYS 51 274 274 LYS LYS B . n B 1 52 PHE 52 275 275 PHE PHE B . n B 1 53 ASN 53 276 276 ASN ASN B . n B 1 54 TRP 54 277 277 TRP TRP B . n B 1 55 TYR 55 278 278 TYR TYR B . n B 1 56 VAL 56 279 279 VAL VAL B . n B 1 57 ASP 57 280 280 ASP ASP B . n B 1 58 GLY 58 281 281 GLY GLY B . n B 1 59 VAL 59 282 282 VAL VAL B . n B 1 60 GLU 60 283 283 GLU GLU B . n B 1 61 VAL 61 284 284 VAL VAL B . n B 1 62 HIS 62 285 285 HIS HIS B . n B 1 63 ASN 63 286 286 ASN ASN B . n B 1 64 ALA 64 287 287 ALA ALA B . n B 1 65 LYS 65 288 288 LYS LYS B . n B 1 66 THR 66 289 289 THR THR B . n B 1 67 LYS 67 290 290 LYS LYS B . n B 1 68 PRO 68 291 291 PRO PRO B . n B 1 69 ARG 69 292 292 ARG ARG B . n B 1 70 GLU 70 293 293 GLU GLU B . n B 1 71 GLU 71 294 294 GLU GLU B . n B 1 72 GLN 72 295 295 GLN GLN B . n B 1 73 TYR 73 296 296 TYR TYR B . n B 1 74 ASN 74 297 297 ASN ASN B . n B 1 75 SER 75 298 298 SER SER B . n B 1 76 THR 76 299 299 THR THR B . n B 1 77 TYR 77 300 300 TYR TYR B . n B 1 78 ARG 78 301 301 ARG ARG B . n B 1 79 VAL 79 302 302 VAL VAL B . n B 1 80 VAL 80 303 303 VAL VAL B . n B 1 81 SER 81 304 304 SER SER B . n B 1 82 VAL 82 305 305 VAL VAL B . n B 1 83 LEU 83 306 306 LEU LEU B . n B 1 84 THR 84 307 307 THR THR B . n B 1 85 VAL 85 308 308 VAL VAL B . n B 1 86 LEU 86 309 309 LEU LEU B . n B 1 87 HIS 87 310 310 HIS HIS B . n B 1 88 GLN 88 311 311 GLN GLN B . n B 1 89 ASP 89 312 312 ASP ASP B . n B 1 90 TRP 90 313 313 TRP TRP B . n B 1 91 LEU 91 314 314 LEU LEU B . n B 1 92 ASN 92 315 315 ASN ASN B . n B 1 93 GLY 93 316 316 GLY GLY B . n B 1 94 LYS 94 317 317 LYS LYS B . n B 1 95 GLU 95 318 318 GLU GLU B . n B 1 96 TYR 96 319 319 TYR TYR B . n B 1 97 LYS 97 320 320 LYS LYS B . n B 1 98 CYS 98 321 321 CYS CYS B . n B 1 99 LYS 99 322 322 LYS LYS B . n B 1 100 VAL 100 323 323 VAL VAL B . n B 1 101 SER 101 324 324 SER SER B . n B 1 102 ASN 102 325 325 ASN ASN B . n B 1 103 LYS 103 326 326 LYS LYS B . n B 1 104 ALA 104 327 327 ALA ALA B . n B 1 105 LEU 105 328 328 LEU LEU B . n B 1 106 PRO 106 329 329 PRO PRO B . n B 1 107 ALA 107 330 330 ALA ALA B . n B 1 108 PRO 108 331 331 PRO PRO B . n B 1 109 ILE 109 332 332 ILE ILE B . n B 1 110 GLU 110 333 333 GLU GLU B . n B 1 111 LYS 111 334 334 LYS LYS B . n B 1 112 THR 112 335 335 THR THR B . n B 1 113 ILE 113 336 336 ILE ILE B . n B 1 114 SER 114 337 337 SER SER B . n B 1 115 LYS 115 338 338 LYS LYS B . n B 1 116 ALA 116 339 339 ALA ALA B . n B 1 117 LYS 117 340 340 LYS LYS B . n B 1 118 GLY 118 341 341 GLY GLY B . n B 1 119 GLN 119 342 342 GLN GLN B . n B 1 120 PRO 120 343 343 PRO PRO B . n B 1 121 ARG 121 344 344 ARG ARG B . n B 1 122 GLU 122 345 345 GLU GLU B . n B 1 123 PRO 123 346 346 PRO PRO B . n B 1 124 GLN 124 347 347 GLN GLN B . n B 1 125 VAL 125 348 348 VAL VAL B . n B 1 126 TYR 126 349 349 TYR TYR B . n B 1 127 THR 127 350 350 THR THR B . n B 1 128 LEU 128 351 351 LEU LEU B . n B 1 129 PRO 129 352 352 PRO PRO B . n B 1 130 PRO 130 353 353 PRO PRO B . n B 1 131 SER 131 354 354 SER SER B . n B 1 132 ARG 132 355 355 ARG ARG B . n B 1 133 ASP 133 356 356 ASP ASP B . n B 1 134 GLU 134 357 357 GLU GLU B . n B 1 135 LEU 135 358 358 LEU LEU B . n B 1 136 THR 136 359 359 THR THR B . n B 1 137 LYS 137 360 360 LYS LYS B . n B 1 138 ASN 138 361 361 ASN ASN B . n B 1 139 GLN 139 362 362 GLN GLN B . n B 1 140 VAL 140 363 363 VAL VAL B . n B 1 141 SER 141 364 364 SER SER B . n B 1 142 LEU 142 365 365 LEU LEU B . n B 1 143 THR 143 366 366 THR THR B . n B 1 144 CYS 144 367 367 CYS CYS B . n B 1 145 LEU 145 368 368 LEU LEU B . n B 1 146 VAL 146 369 369 VAL VAL B . n B 1 147 LYS 147 370 370 LYS LYS B . n B 1 148 GLY 148 371 371 GLY GLY B . n B 1 149 PHE 149 372 372 PHE PHE B . n B 1 150 TYR 150 373 373 TYR TYR B . n B 1 151 PRO 151 374 374 PRO PRO B . n B 1 152 SER 152 375 375 SER SER B . n B 1 153 ASP 153 376 376 ASP ASP B . n B 1 154 ILE 154 377 377 ILE ILE B . n B 1 155 ALA 155 378 378 ALA ALA B . n B 1 156 VAL 156 379 379 VAL VAL B . n B 1 157 GLU 157 380 380 GLU GLU B . n B 1 158 TRP 158 381 381 TRP TRP B . n B 1 159 GLU 159 382 382 GLU GLU B . n B 1 160 SER 160 383 383 SER SER B . n B 1 161 ASN 161 384 384 ASN ASN B . n B 1 162 GLY 162 385 385 GLY GLY B . n B 1 163 GLN 163 386 386 GLN GLN B . n B 1 164 PRO 164 387 387 PRO PRO B . n B 1 165 GLU 165 388 388 GLU GLU B . n B 1 166 ASN 166 389 389 ASN ASN B . n B 1 167 ASN 167 390 390 ASN ASN B . n B 1 168 TYR 168 391 391 TYR TYR B . n B 1 169 LYS 169 392 392 LYS LYS B . n B 1 170 THR 170 393 393 THR THR B . n B 1 171 THR 171 394 394 THR THR B . n B 1 172 PRO 172 395 395 PRO PRO B . n B 1 173 PRO 173 396 396 PRO PRO B . n B 1 174 VAL 174 397 397 VAL VAL B . n B 1 175 LEU 175 398 398 LEU LEU B . n B 1 176 ASP 176 399 399 ASP ASP B . n B 1 177 SER 177 400 400 SER SER B . n B 1 178 ASP 178 401 401 ASP ASP B . n B 1 179 GLY 179 402 402 GLY GLY B . n B 1 180 SER 180 403 403 SER SER B . n B 1 181 PHE 181 404 404 PHE PHE B . n B 1 182 PHE 182 405 405 PHE PHE B . n B 1 183 LEU 183 406 406 LEU LEU B . n B 1 184 TYR 184 407 407 TYR TYR B . n B 1 185 SER 185 408 408 SER SER B . n B 1 186 LYS 186 409 409 LYS LYS B . n B 1 187 LEU 187 410 410 LEU LEU B . n B 1 188 THR 188 411 411 THR THR B . n B 1 189 VAL 189 412 412 VAL VAL B . n B 1 190 ASP 190 413 413 ASP ASP B . n B 1 191 LYS 191 414 414 LYS LYS B . n B 1 192 SER 192 415 415 SER SER B . n B 1 193 ARG 193 416 416 ARG ARG B . n B 1 194 TRP 194 417 417 TRP TRP B . n B 1 195 GLN 195 418 418 GLN GLN B . n B 1 196 GLN 196 419 419 GLN GLN B . n B 1 197 GLY 197 420 420 GLY GLY B . n B 1 198 ASN 198 421 421 ASN ASN B . n B 1 199 VAL 199 422 422 VAL VAL B . n B 1 200 PHE 200 423 423 PHE PHE B . n B 1 201 SER 201 424 424 SER SER B . n B 1 202 CYS 202 425 425 CYS CYS B . n B 1 203 SER 203 426 426 SER SER B . n B 1 204 VAL 204 427 427 VAL VAL B . n B 1 205 MET 205 428 428 MET MET B . n B 1 206 HIS 206 429 429 HIS HIS B . n B 1 207 GLU 207 430 430 GLU GLU B . n B 1 208 ALA 208 431 431 ALA ALA B . n B 1 209 LEU 209 432 432 LEU LEU B . n B 1 210 HIS 210 433 433 HIS HIS B . n B 1 211 ASN 211 434 434 ASN ASN B . n B 1 212 HIS 212 435 435 HIS HIS B . n B 1 213 TYR 213 436 436 TYR TYR B . n B 1 214 THR 214 437 437 THR THR B . n B 1 215 GLN 215 438 438 GLN GLN B . n B 1 216 LYS 216 439 439 LYS LYS B . n B 1 217 SER 217 440 440 SER SER B . n B 1 218 LEU 218 441 441 LEU LEU B . n B 1 219 SER 219 442 442 SER SER B . n B 1 220 LEU 220 443 443 LEU LEU B . n B 1 221 SER 221 444 444 SER SER B . n B 1 222 PRO 222 445 ? ? ? B . n B 1 223 GLY 223 446 ? ? ? B . n C 2 1 ARG 1 1 ? ? ? C . n C 2 2 THR 2 2 ? ? ? C . n C 2 3 GLU 3 3 ? ? ? C . n C 2 4 ASP 4 4 4 ASP ASP C . n C 2 5 LEU 5 5 5 LEU LEU C . n C 2 6 PRO 6 6 6 PRO PRO C . n C 2 7 LYS 7 7 7 LYS LYS C . n C 2 8 ALA 8 8 8 ALA ALA C . n C 2 9 GLU 9 9 9 GLU GLU C . n C 2 10 VAL 10 10 10 VAL VAL C . n C 2 11 ILE 11 11 11 ILE ILE C . n C 2 12 LEU 12 12 12 LEU LEU C . n C 2 13 GLU 13 13 13 GLU GLU C . n C 2 14 PRO 14 14 14 PRO PRO C . n C 2 15 GLN 15 15 15 GLN GLN C . n C 2 16 TRP 16 16 16 TRP TRP C . n C 2 17 ASN 17 17 17 ASN ASN C . n C 2 18 ARG 18 18 18 ARG ARG C . n C 2 19 VAL 19 19 19 VAL VAL C . n C 2 20 LEU 20 20 20 LEU LEU C . n C 2 21 GLU 21 21 21 GLU GLU C . n C 2 22 LYS 22 22 22 LYS LYS C . n C 2 23 ASP 23 23 23 ASP ASP C . n C 2 24 SER 24 24 24 SER SER C . n C 2 25 VAL 25 25 25 VAL VAL C . n C 2 26 THR 26 26 26 THR THR C . n C 2 27 LEU 27 27 27 LEU LEU C . n C 2 28 LYS 28 28 28 LYS LYS C . n C 2 29 CYS 29 29 29 CYS CYS C . n C 2 30 ARG 30 30 30 ARG ARG C . n C 2 31 GLY 31 31 31 GLY GLY C . n C 2 32 ALA 32 32 32 ALA ALA C . n C 2 33 TYR 33 33 33 TYR TYR C . n C 2 34 SER 34 34 34 SER SER C . n C 2 35 PRO 35 35 35 PRO PRO C . n C 2 36 GLU 36 36 36 GLU GLU C . n C 2 37 ASP 37 37 37 ASP ASP C . n C 2 38 ASN 38 38 38 ASN ASN C . n C 2 39 SER 39 39 39 SER SER C . n C 2 40 THR 40 40 40 THR THR C . n C 2 41 GLN 41 41 41 GLN GLN C . n C 2 42 TRP 42 42 42 TRP TRP C . n C 2 43 PHE 43 43 43 PHE PHE C . n C 2 44 HIS 44 44 44 HIS HIS C . n C 2 45 ASN 45 45 45 ASN ASN C . n C 2 46 GLU 46 46 46 GLU GLU C . n C 2 47 SER 47 47 47 SER SER C . n C 2 48 LEU 48 48 48 LEU LEU C . n C 2 49 ILE 49 49 49 ILE ILE C . n C 2 50 SER 50 50 50 SER SER C . n C 2 51 SER 51 51 51 SER SER C . n C 2 52 GLN 52 52 52 GLN GLN C . n C 2 53 ALA 53 53 53 ALA ALA C . n C 2 54 SER 54 54 54 SER SER C . n C 2 55 SER 55 55 55 SER SER C . n C 2 56 TYR 56 56 56 TYR TYR C . n C 2 57 LEU 57 57 57 LEU LEU C . n C 2 58 ILE 58 58 58 ILE ILE C . n C 2 59 ASP 59 59 59 ASP ASP C . n C 2 60 ALA 60 60 60 ALA ALA C . n C 2 61 ALA 61 61 61 ALA ALA C . n C 2 62 THR 62 62 62 THR THR C . n C 2 63 VAL 63 63 63 VAL VAL C . n C 2 64 ASP 64 64 64 ASP ASP C . n C 2 65 ASP 65 65 65 ASP ASP C . n C 2 66 SER 66 66 66 SER SER C . n C 2 67 GLY 67 67 67 GLY GLY C . n C 2 68 GLU 68 68 68 GLU GLU C . n C 2 69 TYR 69 69 69 TYR TYR C . n C 2 70 ARG 70 70 70 ARG ARG C . n C 2 71 CYS 71 71 71 CYS CYS C . n C 2 72 GLN 72 72 72 GLN GLN C . n C 2 73 THR 73 73 73 THR THR C . n C 2 74 SER 74 74 74 SER SER C . n C 2 75 LEU 75 75 75 LEU LEU C . n C 2 76 SER 76 76 76 SER SER C . n C 2 77 THR 77 77 77 THR THR C . n C 2 78 LEU 78 78 78 LEU LEU C . n C 2 79 SER 79 79 79 SER SER C . n C 2 80 ASP 80 80 80 ASP ASP C . n C 2 81 PRO 81 81 81 PRO PRO C . n C 2 82 VAL 82 82 82 VAL VAL C . n C 2 83 GLN 83 83 83 GLN GLN C . n C 2 84 LEU 84 84 84 LEU LEU C . n C 2 85 GLU 85 85 85 GLU GLU C . n C 2 86 VAL 86 86 86 VAL VAL C . n C 2 87 HIS 87 87 87 HIS HIS C . n C 2 88 ILE 88 88 88 ILE ILE C . n C 2 89 GLY 89 89 89 GLY GLY C . n C 2 90 TRP 90 90 90 TRP TRP C . n C 2 91 LEU 91 91 91 LEU LEU C . n C 2 92 LEU 92 92 92 LEU LEU C . n C 2 93 LEU 93 93 93 LEU LEU C . n C 2 94 GLN 94 94 94 GLN GLN C . n C 2 95 ALA 95 95 95 ALA ALA C . n C 2 96 PRO 96 96 96 PRO PRO C . n C 2 97 ARG 97 97 97 ARG ARG C . n C 2 98 TRP 98 98 98 TRP TRP C . n C 2 99 GLU 99 99 99 GLU GLU C . n C 2 100 PHE 100 100 100 PHE PHE C . n C 2 101 LYS 101 101 101 LYS LYS C . n C 2 102 GLU 102 102 102 GLU GLU C . n C 2 103 GLY 103 103 103 GLY GLY C . n C 2 104 ASP 104 104 104 ASP ASP C . n C 2 105 PRO 105 105 105 PRO PRO C . n C 2 106 ILE 106 106 106 ILE ILE C . n C 2 107 HIS 107 107 107 HIS HIS C . n C 2 108 LEU 108 108 108 LEU LEU C . n C 2 109 ARG 109 109 109 ARG ARG C . n C 2 110 CYS 110 110 110 CYS CYS C . n C 2 111 HIS 111 111 111 HIS HIS C . n C 2 112 SER 112 112 112 SER SER C . n C 2 113 TRP 113 113 113 TRP TRP C . n C 2 114 LYS 114 114 114 LYS LYS C . n C 2 115 ASN 115 115 115 ASN ASN C . n C 2 116 THR 116 116 116 THR THR C . n C 2 117 ALA 117 117 117 ALA ALA C . n C 2 118 LEU 118 118 118 LEU LEU C . n C 2 119 HIS 119 119 119 HIS HIS C . n C 2 120 LYS 120 120 120 LYS LYS C . n C 2 121 VAL 121 121 121 VAL VAL C . n C 2 122 THR 122 122 122 THR THR C . n C 2 123 TYR 123 123 123 TYR TYR C . n C 2 124 LEU 124 124 124 LEU LEU C . n C 2 125 GLN 125 125 125 GLN GLN C . n C 2 126 ASN 126 126 126 ASN ASN C . n C 2 127 GLY 127 127 127 GLY GLY C . n C 2 128 LYS 128 128 128 LYS LYS C . n C 2 129 GLY 129 129 129 GLY GLY C . n C 2 130 ARG 130 130 130 ARG ARG C . n C 2 131 LYS 131 131 131 LYS LYS C . n C 2 132 TYR 132 132 132 TYR TYR C . n C 2 133 PHE 133 133 133 PHE PHE C . n C 2 134 HIS 134 134 134 HIS HIS C . n C 2 135 HIS 135 135 135 HIS HIS C . n C 2 136 ASN 136 136 136 ASN ASN C . n C 2 137 SER 137 137 137 SER SER C . n C 2 138 ASP 138 138 138 ASP ASP C . n C 2 139 PHE 139 139 139 PHE PHE C . n C 2 140 TYR 140 140 140 TYR TYR C . n C 2 141 ILE 141 141 141 ILE ILE C . n C 2 142 PRO 142 142 142 PRO PRO C . n C 2 143 LYS 143 143 143 LYS LYS C . n C 2 144 ALA 144 144 144 ALA ALA C . n C 2 145 THR 145 145 145 THR THR C . n C 2 146 LEU 146 146 146 LEU LEU C . n C 2 147 LYS 147 147 147 LYS LYS C . n C 2 148 ASP 148 148 148 ASP ASP C . n C 2 149 SER 149 149 149 SER SER C . n C 2 150 GLY 150 150 150 GLY GLY C . n C 2 151 SER 151 151 151 SER SER C . n C 2 152 TYR 152 152 152 TYR TYR C . n C 2 153 SER 153 153 153 SER SER C . n C 2 154 CYS 154 154 154 CYS CYS C . n C 2 155 ARG 155 155 155 ARG ARG C . n C 2 156 GLY 156 156 156 GLY GLY C . n C 2 157 LEU 157 157 157 LEU LEU C . n C 2 158 VAL 158 158 158 VAL VAL C . n C 2 159 GLY 159 159 159 GLY GLY C . n C 2 160 SER 160 160 160 SER SER C . n C 2 161 LYS 161 161 161 LYS LYS C . n C 2 162 ASN 162 162 162 ASN ASN C . n C 2 163 VAL 163 163 163 VAL VAL C . n C 2 164 SER 164 164 164 SER SER C . n C 2 165 SER 165 165 165 SER SER C . n C 2 166 GLU 166 166 166 GLU GLU C . n C 2 167 THR 167 167 167 THR THR C . n C 2 168 VAL 168 168 168 VAL VAL C . n C 2 169 ASN 169 169 169 ASN ASN C . n C 2 170 ILE 170 170 170 ILE ILE C . n C 2 171 THR 171 171 171 THR THR C . n C 2 172 ILE 172 172 172 ILE ILE C . n C 2 173 THR 173 173 173 THR THR C . n C 2 174 GLN 174 174 174 GLN GLN C . n C 2 175 GLY 175 175 ? ? ? C . n C 2 176 GLY 176 176 ? ? ? C . n C 2 177 HIS 177 177 ? ? ? C . n C 2 178 HIS 178 178 ? ? ? C . n C 2 179 HIS 179 179 ? ? ? C . n C 2 180 HIS 180 180 ? ? ? C . n C 2 181 HIS 181 181 ? ? ? C . n C 2 182 HIS 182 182 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code F 5 CL 1 1012 5 CL CL A . G 6 HOH 1 1101 23 HOH HOH A . G 6 HOH 2 1102 24 HOH HOH A . G 6 HOH 3 1103 5 HOH HOH A . G 6 HOH 4 1104 2 HOH HOH A . G 6 HOH 5 1105 7 HOH HOH A . G 6 HOH 6 1106 3 HOH HOH A . G 6 HOH 7 1107 28 HOH HOH A . G 6 HOH 8 1108 1 HOH HOH A . G 6 HOH 9 1109 4 HOH HOH A . G 6 HOH 10 1110 10 HOH HOH A . G 6 HOH 11 1111 36 HOH HOH A . G 6 HOH 12 1112 6 HOH HOH A . G 6 HOH 13 1113 37 HOH HOH A . G 6 HOH 14 1114 8 HOH HOH A . G 6 HOH 15 1115 32 HOH HOH A . G 6 HOH 16 1116 26 HOH HOH A . G 6 HOH 17 1117 9 HOH HOH A . G 6 HOH 18 1118 35 HOH HOH A . H 6 HOH 1 1101 16 HOH HOH B . H 6 HOH 2 1102 21 HOH HOH B . H 6 HOH 3 1103 12 HOH HOH B . H 6 HOH 4 1104 14 HOH HOH B . H 6 HOH 5 1105 20 HOH HOH B . H 6 HOH 6 1106 17 HOH HOH B . H 6 HOH 7 1107 15 HOH HOH B . H 6 HOH 8 1108 31 HOH HOH B . H 6 HOH 9 1109 30 HOH HOH B . H 6 HOH 10 1110 13 HOH HOH B . I 6 HOH 1 201 19 HOH HOH C . I 6 HOH 2 202 18 HOH HOH C . I 6 HOH 3 203 11 HOH HOH C . I 6 HOH 4 204 29 HOH HOH C . I 6 HOH 5 205 33 HOH HOH C . I 6 HOH 6 206 34 HOH HOH C . I 6 HOH 7 207 22 HOH HOH C . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 D NAG ? D NAG 1 ? NAG -D 2 D NAG ? D NAG 2 ? NAG -D 3 D MAN ? D MAN 7 ? MAN -D 4 D NAG ? D NAG 8 ? NAG -D 5 D MAN ? D MAN 4 ? MAN -D 6 D NAG ? D NAG 5 ? NAG -D 7 D GAL ? D GAL 6 ? GAL -D 8 D FUC ? D FUC 9 ? FUC -L 9 E NAG ? E NAG 1 ? NAG -D 10 E NAG ? E NAG 2 ? NAG -D 11 E MAN ? E MAN 4 ? MAN -D 12 E NAG ? E NAG 5 ? NAG -D 13 E MAN ? E MAN 6 ? MAN -D 14 E NAG ? E NAG 7 ? NAG -D 15 E FUC ? E FUC 8 ? FUC -L # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9740 ? 1 MORE 46 ? 1 'SSA (A^2)' 30180 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-03-21 2 'Structure model' 1 1 2018-07-04 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-11-22 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Structure summary' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Database references' 9 4 'Structure model' 'Derived calculations' 10 4 'Structure model' 'Refinement description' 11 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' struct_ref_seq_dif 2 3 'Structure model' atom_site 3 3 'Structure model' atom_site_anisotrop 4 3 'Structure model' chem_comp 5 3 'Structure model' entity 6 3 'Structure model' pdbx_branch_scheme 7 3 'Structure model' pdbx_chem_comp_identifier 8 3 'Structure model' pdbx_entity_branch 9 3 'Structure model' pdbx_entity_branch_descriptor 10 3 'Structure model' pdbx_entity_branch_link 11 3 'Structure model' pdbx_entity_branch_list 12 3 'Structure model' pdbx_entity_nonpoly 13 3 'Structure model' pdbx_nonpoly_scheme 14 3 'Structure model' pdbx_struct_assembly_gen 15 3 'Structure model' pdbx_struct_mod_residue 16 3 'Structure model' struct_asym 17 3 'Structure model' struct_conn 18 3 'Structure model' struct_site 19 3 'Structure model' struct_site_gen 20 4 'Structure model' chem_comp 21 4 'Structure model' chem_comp_atom 22 4 'Structure model' chem_comp_bond 23 4 'Structure model' database_2 24 4 'Structure model' pdbx_initial_refinement_model 25 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_struct_ref_seq_dif.details' 2 3 'Structure model' '_atom_site.B_iso_or_equiv' 3 3 'Structure model' '_atom_site.Cartn_x' 4 3 'Structure model' '_atom_site.Cartn_y' 5 3 'Structure model' '_atom_site.Cartn_z' 6 3 'Structure model' '_atom_site.auth_asym_id' 7 3 'Structure model' '_atom_site.auth_atom_id' 8 3 'Structure model' '_atom_site.auth_comp_id' 9 3 'Structure model' '_atom_site.auth_seq_id' 10 3 'Structure model' '_atom_site.label_asym_id' 11 3 'Structure model' '_atom_site.label_atom_id' 12 3 'Structure model' '_atom_site.label_comp_id' 13 3 'Structure model' '_atom_site.label_entity_id' 14 3 'Structure model' '_atom_site.type_symbol' 15 3 'Structure model' '_atom_site_anisotrop.U[1][1]' 16 3 'Structure model' '_atom_site_anisotrop.U[1][2]' 17 3 'Structure model' '_atom_site_anisotrop.U[1][3]' 18 3 'Structure model' '_atom_site_anisotrop.U[2][2]' 19 3 'Structure model' '_atom_site_anisotrop.U[2][3]' 20 3 'Structure model' '_atom_site_anisotrop.U[3][3]' 21 3 'Structure model' '_atom_site_anisotrop.id' 22 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 23 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 24 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 25 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 26 3 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 27 3 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 28 3 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 29 3 'Structure model' '_atom_site_anisotrop.type_symbol' 30 3 'Structure model' '_chem_comp.name' 31 3 'Structure model' '_chem_comp.type' 32 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 33 3 'Structure model' '_pdbx_struct_mod_residue.auth_asym_id' 34 3 'Structure model' '_pdbx_struct_mod_residue.auth_seq_id' 35 3 'Structure model' '_pdbx_struct_mod_residue.label_asym_id' 36 3 'Structure model' '_struct_conn.pdbx_dist_value' 37 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 38 3 'Structure model' '_struct_conn.pdbx_role' 39 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 40 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 41 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 42 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 43 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 44 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 45 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 46 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 47 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 48 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 49 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 50 4 'Structure model' '_chem_comp.pdbx_synonyms' 51 4 'Structure model' '_database_2.pdbx_DOI' 52 4 'Structure model' '_database_2.pdbx_database_accession' 53 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -71.7979 138.6250 9.7109 0.1444 0.0162 0.1079 -0.0192 -0.0315 0.0401 0.7439 1.6941 2.0792 -0.5315 -0.3626 0.1971 0.0224 0.0187 -0.0093 0.2475 0.0047 0.0853 -0.0476 -0.0006 -0.0270 'X-RAY DIFFRACTION' 2 ? refined -52.6656 118.5697 11.9494 0.1231 0.0416 0.0950 -0.0187 0.0609 -0.0016 0.9605 1.1405 2.8707 -0.2720 0.2078 -0.2496 0.0906 -0.0048 0.1599 0.0716 -0.0443 -0.0774 -0.2290 0.2300 -0.0463 'X-RAY DIFFRACTION' 3 ? refined -69.9749 118.7165 56.8949 0.3894 0.0437 0.0599 0.0130 0.0960 -0.0028 0.9282 2.2464 2.7206 -0.8957 0.8802 -1.6003 -0.0005 -0.1709 -0.0558 0.2329 0.1629 0.2166 -0.4910 -0.2497 -0.1623 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 234 ? ? A 1011 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 232 ? ? B 1011 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 C 4 ? ? C 174 ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0158 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE C ARG 130 ? ? CZ C ARG 130 ? ? NH1 C ARG 130 ? ? 123.57 120.30 3.27 0.50 N 2 1 CB C ASP 138 ? ? CG C ASP 138 ? ? OD1 C ASP 138 ? ? 123.93 118.30 5.63 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 298 ? ? 78.32 -10.51 2 1 LYS A 338 ? ? -49.48 157.95 3 1 ASN A 434 ? ? 41.38 26.89 4 1 PRO B 238 ? ? -49.77 164.87 5 1 ASP B 280 ? ? 38.68 43.09 6 1 SER B 298 ? ? 61.94 61.02 7 1 PRO B 374 ? ? -69.34 -177.48 8 1 ASN B 384 ? ? 38.59 44.00 9 1 LYS C 22 ? ? 89.55 -22.04 10 1 ASN C 45 ? ? 51.33 -126.86 11 1 THR C 77 ? ? -45.66 161.42 12 1 ARG C 97 ? ? -167.39 -169.28 13 1 ASN C 115 ? ? 58.83 19.07 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 SER _pdbx_validate_peptide_omega.auth_asym_id_1 C _pdbx_validate_peptide_omega.auth_seq_id_1 76 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 THR _pdbx_validate_peptide_omega.auth_asym_id_2 C _pdbx_validate_peptide_omega.auth_seq_id_2 77 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 146.65 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS 224 ? A HIS 1 2 1 Y 1 A THR 225 ? A THR 2 3 1 Y 1 A CYS 226 ? A CYS 3 4 1 Y 1 A PRO 227 ? A PRO 4 5 1 Y 1 A PRO 228 ? A PRO 5 6 1 Y 1 A CYS 229 ? A CYS 6 7 1 Y 1 A PRO 230 ? A PRO 7 8 1 Y 1 A ALA 231 ? A ALA 8 9 1 Y 1 A PRO 232 ? A PRO 9 10 1 Y 1 A GLU 233 ? A GLU 10 11 1 Y 1 A PRO 445 ? A PRO 222 12 1 Y 1 A GLY 446 ? A GLY 223 13 1 Y 1 B HIS 224 ? B HIS 1 14 1 Y 1 B THR 225 ? B THR 2 15 1 Y 1 B CYS 226 ? B CYS 3 16 1 Y 1 B PRO 227 ? B PRO 4 17 1 Y 1 B PRO 228 ? B PRO 5 18 1 Y 1 B CYS 229 ? B CYS 6 19 1 Y 1 B PRO 230 ? B PRO 7 20 1 Y 1 B ALA 231 ? B ALA 8 21 1 Y 1 B PRO 445 ? B PRO 222 22 1 Y 1 B GLY 446 ? B GLY 223 23 1 Y 1 C ARG 1 ? C ARG 1 24 1 Y 1 C THR 2 ? C THR 2 25 1 Y 1 C GLU 3 ? C GLU 3 26 1 Y 1 C GLY 175 ? C GLY 175 27 1 Y 1 C GLY 176 ? C GLY 176 28 1 Y 1 C HIS 177 ? C HIS 177 29 1 Y 1 C HIS 178 ? C HIS 178 30 1 Y 1 C HIS 179 ? C HIS 179 31 1 Y 1 C HIS 180 ? C HIS 180 32 1 Y 1 C HIS 181 ? C HIS 181 33 1 Y 1 C HIS 182 ? C HIS 182 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CL CL CL N N 98 CYS N N N N 99 CYS CA C N R 100 CYS C C N N 101 CYS O O N N 102 CYS CB C N N 103 CYS SG S N N 104 CYS OXT O N N 105 CYS H H N N 106 CYS H2 H N N 107 CYS HA H N N 108 CYS HB2 H N N 109 CYS HB3 H N N 110 CYS HG H N N 111 CYS HXT H N N 112 FUC C1 C N R 113 FUC C2 C N S 114 FUC C3 C N R 115 FUC C4 C N S 116 FUC C5 C N S 117 FUC C6 C N N 118 FUC O1 O N N 119 FUC O2 O N N 120 FUC O3 O N N 121 FUC O4 O N N 122 FUC O5 O N N 123 FUC H1 H N N 124 FUC H2 H N N 125 FUC H3 H N N 126 FUC H4 H N N 127 FUC H5 H N N 128 FUC H61 H N N 129 FUC H62 H N N 130 FUC H63 H N N 131 FUC HO1 H N N 132 FUC HO2 H N N 133 FUC HO3 H N N 134 FUC HO4 H N N 135 GAL C1 C N R 136 GAL C2 C N R 137 GAL C3 C N S 138 GAL C4 C N R 139 GAL C5 C N R 140 GAL C6 C N N 141 GAL O1 O N N 142 GAL O2 O N N 143 GAL O3 O N N 144 GAL O4 O N N 145 GAL O5 O N N 146 GAL O6 O N N 147 GAL H1 H N N 148 GAL H2 H N N 149 GAL H3 H N N 150 GAL H4 H N N 151 GAL H5 H N N 152 GAL H61 H N N 153 GAL H62 H N N 154 GAL HO1 H N N 155 GAL HO2 H N N 156 GAL HO3 H N N 157 GAL HO4 H N N 158 GAL HO6 H N N 159 GLN N N N N 160 GLN CA C N S 161 GLN C C N N 162 GLN O O N N 163 GLN CB C N N 164 GLN CG C N N 165 GLN CD C N N 166 GLN OE1 O N N 167 GLN NE2 N N N 168 GLN OXT O N N 169 GLN H H N N 170 GLN H2 H N N 171 GLN HA H N N 172 GLN HB2 H N N 173 GLN HB3 H N N 174 GLN HG2 H N N 175 GLN HG3 H N N 176 GLN HE21 H N N 177 GLN HE22 H N N 178 GLN HXT H N N 179 GLU N N N N 180 GLU CA C N S 181 GLU C C N N 182 GLU O O N N 183 GLU CB C N N 184 GLU CG C N N 185 GLU CD C N N 186 GLU OE1 O N N 187 GLU OE2 O N N 188 GLU OXT O N N 189 GLU H H N N 190 GLU H2 H N N 191 GLU HA H N N 192 GLU HB2 H N N 193 GLU HB3 H N N 194 GLU HG2 H N N 195 GLU HG3 H N N 196 GLU HE2 H N N 197 GLU HXT H N N 198 GLY N N N N 199 GLY CA C N N 200 GLY C C N N 201 GLY O O N N 202 GLY OXT O N N 203 GLY H H N N 204 GLY H2 H N N 205 GLY HA2 H N N 206 GLY HA3 H N N 207 GLY HXT H N N 208 HIS N N N N 209 HIS CA C N S 210 HIS C C N N 211 HIS O O N N 212 HIS CB C N N 213 HIS CG C Y N 214 HIS ND1 N Y N 215 HIS CD2 C Y N 216 HIS CE1 C Y N 217 HIS NE2 N Y N 218 HIS OXT O N N 219 HIS H H N N 220 HIS H2 H N N 221 HIS HA H N N 222 HIS HB2 H N N 223 HIS HB3 H N N 224 HIS HD1 H N N 225 HIS HD2 H N N 226 HIS HE1 H N N 227 HIS HE2 H N N 228 HIS HXT H N N 229 HOH O O N N 230 HOH H1 H N N 231 HOH H2 H N N 232 ILE N N N N 233 ILE CA C N S 234 ILE C C N N 235 ILE O O N N 236 ILE CB C N S 237 ILE CG1 C N N 238 ILE CG2 C N N 239 ILE CD1 C N N 240 ILE OXT O N N 241 ILE H H N N 242 ILE H2 H N N 243 ILE HA H N N 244 ILE HB H N N 245 ILE HG12 H N N 246 ILE HG13 H N N 247 ILE HG21 H N N 248 ILE HG22 H N N 249 ILE HG23 H N N 250 ILE HD11 H N N 251 ILE HD12 H N N 252 ILE HD13 H N N 253 ILE HXT H N N 254 LEU N N N N 255 LEU CA C N S 256 LEU C C N N 257 LEU O O N N 258 LEU CB C N N 259 LEU CG C N N 260 LEU CD1 C N N 261 LEU CD2 C N N 262 LEU OXT O N N 263 LEU H H N N 264 LEU H2 H N N 265 LEU HA H N N 266 LEU HB2 H N N 267 LEU HB3 H N N 268 LEU HG H N N 269 LEU HD11 H N N 270 LEU HD12 H N N 271 LEU HD13 H N N 272 LEU HD21 H N N 273 LEU HD22 H N N 274 LEU HD23 H N N 275 LEU HXT H N N 276 LYS N N N N 277 LYS CA C N S 278 LYS C C N N 279 LYS O O N N 280 LYS CB C N N 281 LYS CG C N N 282 LYS CD C N N 283 LYS CE C N N 284 LYS NZ N N N 285 LYS OXT O N N 286 LYS H H N N 287 LYS H2 H N N 288 LYS HA H N N 289 LYS HB2 H N N 290 LYS HB3 H N N 291 LYS HG2 H N N 292 LYS HG3 H N N 293 LYS HD2 H N N 294 LYS HD3 H N N 295 LYS HE2 H N N 296 LYS HE3 H N N 297 LYS HZ1 H N N 298 LYS HZ2 H N N 299 LYS HZ3 H N N 300 LYS HXT H N N 301 MAN C1 C N S 302 MAN C2 C N S 303 MAN C3 C N S 304 MAN C4 C N S 305 MAN C5 C N R 306 MAN C6 C N N 307 MAN O1 O N N 308 MAN O2 O N N 309 MAN O3 O N N 310 MAN O4 O N N 311 MAN O5 O N N 312 MAN O6 O N N 313 MAN H1 H N N 314 MAN H2 H N N 315 MAN H3 H N N 316 MAN H4 H N N 317 MAN H5 H N N 318 MAN H61 H N N 319 MAN H62 H N N 320 MAN HO1 H N N 321 MAN HO2 H N N 322 MAN HO3 H N N 323 MAN HO4 H N N 324 MAN HO6 H N N 325 MET N N N N 326 MET CA C N S 327 MET C C N N 328 MET O O N N 329 MET CB C N N 330 MET CG C N N 331 MET SD S N N 332 MET CE C N N 333 MET OXT O N N 334 MET H H N N 335 MET H2 H N N 336 MET HA H N N 337 MET HB2 H N N 338 MET HB3 H N N 339 MET HG2 H N N 340 MET HG3 H N N 341 MET HE1 H N N 342 MET HE2 H N N 343 MET HE3 H N N 344 MET HXT H N N 345 NAG C1 C N R 346 NAG C2 C N R 347 NAG C3 C N R 348 NAG C4 C N S 349 NAG C5 C N R 350 NAG C6 C N N 351 NAG C7 C N N 352 NAG C8 C N N 353 NAG N2 N N N 354 NAG O1 O N N 355 NAG O3 O N N 356 NAG O4 O N N 357 NAG O5 O N N 358 NAG O6 O N N 359 NAG O7 O N N 360 NAG H1 H N N 361 NAG H2 H N N 362 NAG H3 H N N 363 NAG H4 H N N 364 NAG H5 H N N 365 NAG H61 H N N 366 NAG H62 H N N 367 NAG H81 H N N 368 NAG H82 H N N 369 NAG H83 H N N 370 NAG HN2 H N N 371 NAG HO1 H N N 372 NAG HO3 H N N 373 NAG HO4 H N N 374 NAG HO6 H N N 375 PHE N N N N 376 PHE CA C N S 377 PHE C C N N 378 PHE O O N N 379 PHE CB C N N 380 PHE CG C Y N 381 PHE CD1 C Y N 382 PHE CD2 C Y N 383 PHE CE1 C Y N 384 PHE CE2 C Y N 385 PHE CZ C Y N 386 PHE OXT O N N 387 PHE H H N N 388 PHE H2 H N N 389 PHE HA H N N 390 PHE HB2 H N N 391 PHE HB3 H N N 392 PHE HD1 H N N 393 PHE HD2 H N N 394 PHE HE1 H N N 395 PHE HE2 H N N 396 PHE HZ H N N 397 PHE HXT H N N 398 PRO N N N N 399 PRO CA C N S 400 PRO C C N N 401 PRO O O N N 402 PRO CB C N N 403 PRO CG C N N 404 PRO CD C N N 405 PRO OXT O N N 406 PRO H H N N 407 PRO HA H N N 408 PRO HB2 H N N 409 PRO HB3 H N N 410 PRO HG2 H N N 411 PRO HG3 H N N 412 PRO HD2 H N N 413 PRO HD3 H N N 414 PRO HXT H N N 415 SER N N N N 416 SER CA C N S 417 SER C C N N 418 SER O O N N 419 SER CB C N N 420 SER OG O N N 421 SER OXT O N N 422 SER H H N N 423 SER H2 H N N 424 SER HA H N N 425 SER HB2 H N N 426 SER HB3 H N N 427 SER HG H N N 428 SER HXT H N N 429 THR N N N N 430 THR CA C N S 431 THR C C N N 432 THR O O N N 433 THR CB C N R 434 THR OG1 O N N 435 THR CG2 C N N 436 THR OXT O N N 437 THR H H N N 438 THR H2 H N N 439 THR HA H N N 440 THR HB H N N 441 THR HG1 H N N 442 THR HG21 H N N 443 THR HG22 H N N 444 THR HG23 H N N 445 THR HXT H N N 446 TRP N N N N 447 TRP CA C N S 448 TRP C C N N 449 TRP O O N N 450 TRP CB C N N 451 TRP CG C Y N 452 TRP CD1 C Y N 453 TRP CD2 C Y N 454 TRP NE1 N Y N 455 TRP CE2 C Y N 456 TRP CE3 C Y N 457 TRP CZ2 C Y N 458 TRP CZ3 C Y N 459 TRP CH2 C Y N 460 TRP OXT O N N 461 TRP H H N N 462 TRP H2 H N N 463 TRP HA H N N 464 TRP HB2 H N N 465 TRP HB3 H N N 466 TRP HD1 H N N 467 TRP HE1 H N N 468 TRP HE3 H N N 469 TRP HZ2 H N N 470 TRP HZ3 H N N 471 TRP HH2 H N N 472 TRP HXT H N N 473 TYR N N N N 474 TYR CA C N S 475 TYR C C N N 476 TYR O O N N 477 TYR CB C N N 478 TYR CG C Y N 479 TYR CD1 C Y N 480 TYR CD2 C Y N 481 TYR CE1 C Y N 482 TYR CE2 C Y N 483 TYR CZ C Y N 484 TYR OH O N N 485 TYR OXT O N N 486 TYR H H N N 487 TYR H2 H N N 488 TYR HA H N N 489 TYR HB2 H N N 490 TYR HB3 H N N 491 TYR HD1 H N N 492 TYR HD2 H N N 493 TYR HE1 H N N 494 TYR HE2 H N N 495 TYR HH H N N 496 TYR HXT H N N 497 VAL N N N N 498 VAL CA C N S 499 VAL C C N N 500 VAL O O N N 501 VAL CB C N N 502 VAL CG1 C N N 503 VAL CG2 C N N 504 VAL OXT O N N 505 VAL H H N N 506 VAL H2 H N N 507 VAL HA H N N 508 VAL HB H N N 509 VAL HG11 H N N 510 VAL HG12 H N N 511 VAL HG13 H N N 512 VAL HG21 H N N 513 VAL HG22 H N N 514 VAL HG23 H N N 515 VAL HXT H N N 516 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 FUC C1 C2 sing N N 107 FUC C1 O1 sing N N 108 FUC C1 O5 sing N N 109 FUC C1 H1 sing N N 110 FUC C2 C3 sing N N 111 FUC C2 O2 sing N N 112 FUC C2 H2 sing N N 113 FUC C3 C4 sing N N 114 FUC C3 O3 sing N N 115 FUC C3 H3 sing N N 116 FUC C4 C5 sing N N 117 FUC C4 O4 sing N N 118 FUC C4 H4 sing N N 119 FUC C5 C6 sing N N 120 FUC C5 O5 sing N N 121 FUC C5 H5 sing N N 122 FUC C6 H61 sing N N 123 FUC C6 H62 sing N N 124 FUC C6 H63 sing N N 125 FUC O1 HO1 sing N N 126 FUC O2 HO2 sing N N 127 FUC O3 HO3 sing N N 128 FUC O4 HO4 sing N N 129 GAL C1 C2 sing N N 130 GAL C1 O1 sing N N 131 GAL C1 O5 sing N N 132 GAL C1 H1 sing N N 133 GAL C2 C3 sing N N 134 GAL C2 O2 sing N N 135 GAL C2 H2 sing N N 136 GAL C3 C4 sing N N 137 GAL C3 O3 sing N N 138 GAL C3 H3 sing N N 139 GAL C4 C5 sing N N 140 GAL C4 O4 sing N N 141 GAL C4 H4 sing N N 142 GAL C5 C6 sing N N 143 GAL C5 O5 sing N N 144 GAL C5 H5 sing N N 145 GAL C6 O6 sing N N 146 GAL C6 H61 sing N N 147 GAL C6 H62 sing N N 148 GAL O1 HO1 sing N N 149 GAL O2 HO2 sing N N 150 GAL O3 HO3 sing N N 151 GAL O4 HO4 sing N N 152 GAL O6 HO6 sing N N 153 GLN N CA sing N N 154 GLN N H sing N N 155 GLN N H2 sing N N 156 GLN CA C sing N N 157 GLN CA CB sing N N 158 GLN CA HA sing N N 159 GLN C O doub N N 160 GLN C OXT sing N N 161 GLN CB CG sing N N 162 GLN CB HB2 sing N N 163 GLN CB HB3 sing N N 164 GLN CG CD sing N N 165 GLN CG HG2 sing N N 166 GLN CG HG3 sing N N 167 GLN CD OE1 doub N N 168 GLN CD NE2 sing N N 169 GLN NE2 HE21 sing N N 170 GLN NE2 HE22 sing N N 171 GLN OXT HXT sing N N 172 GLU N CA sing N N 173 GLU N H sing N N 174 GLU N H2 sing N N 175 GLU CA C sing N N 176 GLU CA CB sing N N 177 GLU CA HA sing N N 178 GLU C O doub N N 179 GLU C OXT sing N N 180 GLU CB CG sing N N 181 GLU CB HB2 sing N N 182 GLU CB HB3 sing N N 183 GLU CG CD sing N N 184 GLU CG HG2 sing N N 185 GLU CG HG3 sing N N 186 GLU CD OE1 doub N N 187 GLU CD OE2 sing N N 188 GLU OE2 HE2 sing N N 189 GLU OXT HXT sing N N 190 GLY N CA sing N N 191 GLY N H sing N N 192 GLY N H2 sing N N 193 GLY CA C sing N N 194 GLY CA HA2 sing N N 195 GLY CA HA3 sing N N 196 GLY C O doub N N 197 GLY C OXT sing N N 198 GLY OXT HXT sing N N 199 HIS N CA sing N N 200 HIS N H sing N N 201 HIS N H2 sing N N 202 HIS CA C sing N N 203 HIS CA CB sing N N 204 HIS CA HA sing N N 205 HIS C O doub N N 206 HIS C OXT sing N N 207 HIS CB CG sing N N 208 HIS CB HB2 sing N N 209 HIS CB HB3 sing N N 210 HIS CG ND1 sing Y N 211 HIS CG CD2 doub Y N 212 HIS ND1 CE1 doub Y N 213 HIS ND1 HD1 sing N N 214 HIS CD2 NE2 sing Y N 215 HIS CD2 HD2 sing N N 216 HIS CE1 NE2 sing Y N 217 HIS CE1 HE1 sing N N 218 HIS NE2 HE2 sing N N 219 HIS OXT HXT sing N N 220 HOH O H1 sing N N 221 HOH O H2 sing N N 222 ILE N CA sing N N 223 ILE N H sing N N 224 ILE N H2 sing N N 225 ILE CA C sing N N 226 ILE CA CB sing N N 227 ILE CA HA sing N N 228 ILE C O doub N N 229 ILE C OXT sing N N 230 ILE CB CG1 sing N N 231 ILE CB CG2 sing N N 232 ILE CB HB sing N N 233 ILE CG1 CD1 sing N N 234 ILE CG1 HG12 sing N N 235 ILE CG1 HG13 sing N N 236 ILE CG2 HG21 sing N N 237 ILE CG2 HG22 sing N N 238 ILE CG2 HG23 sing N N 239 ILE CD1 HD11 sing N N 240 ILE CD1 HD12 sing N N 241 ILE CD1 HD13 sing N N 242 ILE OXT HXT sing N N 243 LEU N CA sing N N 244 LEU N H sing N N 245 LEU N H2 sing N N 246 LEU CA C sing N N 247 LEU CA CB sing N N 248 LEU CA HA sing N N 249 LEU C O doub N N 250 LEU C OXT sing N N 251 LEU CB CG sing N N 252 LEU CB HB2 sing N N 253 LEU CB HB3 sing N N 254 LEU CG CD1 sing N N 255 LEU CG CD2 sing N N 256 LEU CG HG sing N N 257 LEU CD1 HD11 sing N N 258 LEU CD1 HD12 sing N N 259 LEU CD1 HD13 sing N N 260 LEU CD2 HD21 sing N N 261 LEU CD2 HD22 sing N N 262 LEU CD2 HD23 sing N N 263 LEU OXT HXT sing N N 264 LYS N CA sing N N 265 LYS N H sing N N 266 LYS N H2 sing N N 267 LYS CA C sing N N 268 LYS CA CB sing N N 269 LYS CA HA sing N N 270 LYS C O doub N N 271 LYS C OXT sing N N 272 LYS CB CG sing N N 273 LYS CB HB2 sing N N 274 LYS CB HB3 sing N N 275 LYS CG CD sing N N 276 LYS CG HG2 sing N N 277 LYS CG HG3 sing N N 278 LYS CD CE sing N N 279 LYS CD HD2 sing N N 280 LYS CD HD3 sing N N 281 LYS CE NZ sing N N 282 LYS CE HE2 sing N N 283 LYS CE HE3 sing N N 284 LYS NZ HZ1 sing N N 285 LYS NZ HZ2 sing N N 286 LYS NZ HZ3 sing N N 287 LYS OXT HXT sing N N 288 MAN C1 C2 sing N N 289 MAN C1 O1 sing N N 290 MAN C1 O5 sing N N 291 MAN C1 H1 sing N N 292 MAN C2 C3 sing N N 293 MAN C2 O2 sing N N 294 MAN C2 H2 sing N N 295 MAN C3 C4 sing N N 296 MAN C3 O3 sing N N 297 MAN C3 H3 sing N N 298 MAN C4 C5 sing N N 299 MAN C4 O4 sing N N 300 MAN C4 H4 sing N N 301 MAN C5 C6 sing N N 302 MAN C5 O5 sing N N 303 MAN C5 H5 sing N N 304 MAN C6 O6 sing N N 305 MAN C6 H61 sing N N 306 MAN C6 H62 sing N N 307 MAN O1 HO1 sing N N 308 MAN O2 HO2 sing N N 309 MAN O3 HO3 sing N N 310 MAN O4 HO4 sing N N 311 MAN O6 HO6 sing N N 312 MET N CA sing N N 313 MET N H sing N N 314 MET N H2 sing N N 315 MET CA C sing N N 316 MET CA CB sing N N 317 MET CA HA sing N N 318 MET C O doub N N 319 MET C OXT sing N N 320 MET CB CG sing N N 321 MET CB HB2 sing N N 322 MET CB HB3 sing N N 323 MET CG SD sing N N 324 MET CG HG2 sing N N 325 MET CG HG3 sing N N 326 MET SD CE sing N N 327 MET CE HE1 sing N N 328 MET CE HE2 sing N N 329 MET CE HE3 sing N N 330 MET OXT HXT sing N N 331 NAG C1 C2 sing N N 332 NAG C1 O1 sing N N 333 NAG C1 O5 sing N N 334 NAG C1 H1 sing N N 335 NAG C2 C3 sing N N 336 NAG C2 N2 sing N N 337 NAG C2 H2 sing N N 338 NAG C3 C4 sing N N 339 NAG C3 O3 sing N N 340 NAG C3 H3 sing N N 341 NAG C4 C5 sing N N 342 NAG C4 O4 sing N N 343 NAG C4 H4 sing N N 344 NAG C5 C6 sing N N 345 NAG C5 O5 sing N N 346 NAG C5 H5 sing N N 347 NAG C6 O6 sing N N 348 NAG C6 H61 sing N N 349 NAG C6 H62 sing N N 350 NAG C7 C8 sing N N 351 NAG C7 N2 sing N N 352 NAG C7 O7 doub N N 353 NAG C8 H81 sing N N 354 NAG C8 H82 sing N N 355 NAG C8 H83 sing N N 356 NAG N2 HN2 sing N N 357 NAG O1 HO1 sing N N 358 NAG O3 HO3 sing N N 359 NAG O4 HO4 sing N N 360 NAG O6 HO6 sing N N 361 PHE N CA sing N N 362 PHE N H sing N N 363 PHE N H2 sing N N 364 PHE CA C sing N N 365 PHE CA CB sing N N 366 PHE CA HA sing N N 367 PHE C O doub N N 368 PHE C OXT sing N N 369 PHE CB CG sing N N 370 PHE CB HB2 sing N N 371 PHE CB HB3 sing N N 372 PHE CG CD1 doub Y N 373 PHE CG CD2 sing Y N 374 PHE CD1 CE1 sing Y N 375 PHE CD1 HD1 sing N N 376 PHE CD2 CE2 doub Y N 377 PHE CD2 HD2 sing N N 378 PHE CE1 CZ doub Y N 379 PHE CE1 HE1 sing N N 380 PHE CE2 CZ sing Y N 381 PHE CE2 HE2 sing N N 382 PHE CZ HZ sing N N 383 PHE OXT HXT sing N N 384 PRO N CA sing N N 385 PRO N CD sing N N 386 PRO N H sing N N 387 PRO CA C sing N N 388 PRO CA CB sing N N 389 PRO CA HA sing N N 390 PRO C O doub N N 391 PRO C OXT sing N N 392 PRO CB CG sing N N 393 PRO CB HB2 sing N N 394 PRO CB HB3 sing N N 395 PRO CG CD sing N N 396 PRO CG HG2 sing N N 397 PRO CG HG3 sing N N 398 PRO CD HD2 sing N N 399 PRO CD HD3 sing N N 400 PRO OXT HXT sing N N 401 SER N CA sing N N 402 SER N H sing N N 403 SER N H2 sing N N 404 SER CA C sing N N 405 SER CA CB sing N N 406 SER CA HA sing N N 407 SER C O doub N N 408 SER C OXT sing N N 409 SER CB OG sing N N 410 SER CB HB2 sing N N 411 SER CB HB3 sing N N 412 SER OG HG sing N N 413 SER OXT HXT sing N N 414 THR N CA sing N N 415 THR N H sing N N 416 THR N H2 sing N N 417 THR CA C sing N N 418 THR CA CB sing N N 419 THR CA HA sing N N 420 THR C O doub N N 421 THR C OXT sing N N 422 THR CB OG1 sing N N 423 THR CB CG2 sing N N 424 THR CB HB sing N N 425 THR OG1 HG1 sing N N 426 THR CG2 HG21 sing N N 427 THR CG2 HG22 sing N N 428 THR CG2 HG23 sing N N 429 THR OXT HXT sing N N 430 TRP N CA sing N N 431 TRP N H sing N N 432 TRP N H2 sing N N 433 TRP CA C sing N N 434 TRP CA CB sing N N 435 TRP CA HA sing N N 436 TRP C O doub N N 437 TRP C OXT sing N N 438 TRP CB CG sing N N 439 TRP CB HB2 sing N N 440 TRP CB HB3 sing N N 441 TRP CG CD1 doub Y N 442 TRP CG CD2 sing Y N 443 TRP CD1 NE1 sing Y N 444 TRP CD1 HD1 sing N N 445 TRP CD2 CE2 doub Y N 446 TRP CD2 CE3 sing Y N 447 TRP NE1 CE2 sing Y N 448 TRP NE1 HE1 sing N N 449 TRP CE2 CZ2 sing Y N 450 TRP CE3 CZ3 doub Y N 451 TRP CE3 HE3 sing N N 452 TRP CZ2 CH2 doub Y N 453 TRP CZ2 HZ2 sing N N 454 TRP CZ3 CH2 sing Y N 455 TRP CZ3 HZ3 sing N N 456 TRP CH2 HH2 sing N N 457 TRP OXT HXT sing N N 458 TYR N CA sing N N 459 TYR N H sing N N 460 TYR N H2 sing N N 461 TYR CA C sing N N 462 TYR CA CB sing N N 463 TYR CA HA sing N N 464 TYR C O doub N N 465 TYR C OXT sing N N 466 TYR CB CG sing N N 467 TYR CB HB2 sing N N 468 TYR CB HB3 sing N N 469 TYR CG CD1 doub Y N 470 TYR CG CD2 sing Y N 471 TYR CD1 CE1 sing Y N 472 TYR CD1 HD1 sing N N 473 TYR CD2 CE2 doub Y N 474 TYR CD2 HD2 sing N N 475 TYR CE1 CZ doub Y N 476 TYR CE1 HE1 sing N N 477 TYR CE2 CZ sing Y N 478 TYR CE2 HE2 sing N N 479 TYR CZ OH sing N N 480 TYR OH HH sing N N 481 TYR OXT HXT sing N N 482 VAL N CA sing N N 483 VAL N H sing N N 484 VAL N H2 sing N N 485 VAL CA C sing N N 486 VAL CA CB sing N N 487 VAL CA HA sing N N 488 VAL C O doub N N 489 VAL C OXT sing N N 490 VAL CB CG1 sing N N 491 VAL CB CG2 sing N N 492 VAL CB HB sing N N 493 VAL CG1 HG11 sing N N 494 VAL CG1 HG12 sing N N 495 VAL CG1 HG13 sing N N 496 VAL CG2 HG21 sing N N 497 VAL CG2 HG22 sing N N 498 VAL CG2 HG23 sing N N 499 VAL OXT HXT sing N N 500 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science' Japan 25249115 1 'Japan Agency for Medical Research and Development (AMED)' Japan 'Research on Regulatory Science of 427 Pharmaceuticals and Medical Devices' 2 'Japan Society for the Promotion of Science' Japan 15K06962 3 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero D 3 NAG 1 D NAG 1 A NAG 1001 n D 3 NAG 2 D NAG 2 A NAG 1002 n D 3 BMA 3 D BMA 3 A BMA 1003 n D 3 MAN 4 D MAN 4 A MAN 1007 n D 3 NAG 5 D NAG 5 A NAG 1008 n D 3 GAL 6 D GAL 6 A GAL 1009 n D 3 MAN 7 D MAN 7 A MAN 1004 n D 3 NAG 8 D NAG 8 A NAG 1005 n D 3 FUC 9 D FUC 9 A FUC 1011 n E 4 NAG 1 E NAG 1 B NAG 1001 n E 4 NAG 2 E NAG 2 B NAG 1002 n E 4 BMA 3 E BMA 3 B BMA 1003 n E 4 MAN 4 E MAN 4 B MAN 1004 n E 4 NAG 5 E NAG 5 B NAG 1005 n E 4 MAN 6 E MAN 6 B MAN 1007 n E 4 NAG 7 E NAG 7 B NAG 1008 n E 4 FUC 8 E FUC 8 B FUC 1011 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 'DGalpb1-4DGlcpNAcb1-2DManpa1-6[DGlcpNAcb1-2DManpa1-3]DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 3 ;WURCS=2.0/5,9,8/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][a1221m-1a_1-5]/1-1-2-3-1-3-1-4-5/a4-b1_a6-i1_b4-c1_c3-d1_c6-f1_d2-e1_f2-g1_g4-h1 ; WURCS PDB2Glycan 1.1.0 3 3 ;[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{[(2+1)][b-D-GlcpNAc]{}}[(6+1)][a-D-Manp]{[(2+1)][b-D-GlcpNAc]{[(4+1)][b-D-Galp]{}}}}}[(6+1)][a-L-Fucp]{}}} ; LINUCS PDB-CARE ? 4 4 'DGlcpNAcb1-2DManpa1-3[DGlcpNAcb1-2DManpa1-6]DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 5 4 ;WURCS=2.0/4,8,7/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a1221m-1a_1-5]/1-1-2-3-1-3-1-4/a4-b1_a6-h1_b4-c1_c3-d1_c6-f1_d2-e1_f2-g1 ; WURCS PDB2Glycan 1.1.0 6 4 ;[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{[(2+1)][b-D-GlcpNAc]{}}[(6+1)][a-D-Manp]{[(2+1)][b-D-GlcpNAc]{}}}}[(6+1)][a-L-Fucp]{}}} ; LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 3 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 3 4 MAN C1 O1 3 BMA O6 HO6 sing ? 4 3 5 NAG C1 O1 4 MAN O2 HO2 sing ? 5 3 6 GAL C1 O1 5 NAG O4 HO4 sing ? 6 3 7 MAN C1 O1 3 BMA O3 HO3 sing ? 7 3 8 NAG C1 O1 7 MAN O2 HO2 sing ? 8 3 9 FUC C1 O1 1 NAG O6 HO6 sing ? 9 4 2 NAG C1 O1 1 NAG O4 HO4 sing ? 10 4 3 BMA C1 O1 2 NAG O4 HO4 sing ? 11 4 4 MAN C1 O1 3 BMA O3 HO3 sing ? 12 4 5 NAG C1 O1 4 MAN O2 HO2 sing ? 13 4 6 MAN C1 O1 3 BMA O6 HO6 sing ? 14 4 7 NAG C1 O1 6 MAN O2 HO2 sing ? 15 4 8 FUC C1 O1 1 NAG O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 NAG 1 n 3 NAG 2 n 3 BMA 3 n 3 MAN 4 n 3 NAG 5 n 3 GAL 6 n 3 MAN 7 n 3 NAG 8 n 3 FUC 9 n 4 NAG 1 n 4 NAG 2 n 4 BMA 3 n 4 MAN 4 n 4 NAG 5 n 4 MAN 6 n 4 NAG 7 n 4 FUC 8 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'CHLORIDE ION' CL 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3AY4 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #