data_5ZPW # _entry.id 5ZPW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5ZPW pdb_00005zpw 10.2210/pdb5zpw/pdb WWPDB D_1300007419 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5ZPW _pdbx_database_status.recvd_initial_deposition_date 2018-04-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Guo, Y.' 1 ? 'Shi, X.L.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Medchemcomm _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2040-2503 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 9 _citation.language ? _citation.page_first 1226 _citation.page_last 1231 _citation.title 'Generation of a long-acting fusion inhibitor against HIV-1.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1039/c8md00124c _citation.pdbx_database_id_PubMed 30109011 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Guo, Y.' 1 ? primary 'Zhou, P.P.' 2 ? primary 'Zhang, S.Y.' 3 ? primary 'Fan, X.W.' 4 ? primary 'Dou, Y.W.' 5 ? primary 'Shi, X.L.' 6 0000-0002-2003-3323 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5ZPW _cell.details ? _cell.formula_units_Z ? _cell.length_a 84.737 _cell.length_a_esd ? _cell.length_b 84.737 _cell.length_b_esd ? _cell.length_c 66.144 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 24 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZPW _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Transmembrane protein gp41' 4133.926 3 ? ? ? ? 2 polymer syn MET-THR-TRP-GLU-GLU-TRP-ASP-MK8-LYS-ILE-GLU-MK8-TYR-THR-MK8-LYS-ILE-GLU-MK8-LEU-ILE-LYS-LYS-SER 3083.719 3 ? ? ? ? 3 water nat water 18.015 29 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no NLLRAIEAQQHLLQLTVWGIKQLQARLLAVERYLK NLLRAIEAQQHLLQLTVWGIKQLQARLLAVERYLK A,C,E ? 2 'polypeptide(L)' no yes 'MTWEEWD(MK8)KIE(MK8)YT(MK8)KIE(MK8)LIKKS' MTWEEWDLKIELYTLKIELLIKKS B,D,F ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 LEU n 1 3 LEU n 1 4 ARG n 1 5 ALA n 1 6 ILE n 1 7 GLU n 1 8 ALA n 1 9 GLN n 1 10 GLN n 1 11 HIS n 1 12 LEU n 1 13 LEU n 1 14 GLN n 1 15 LEU n 1 16 THR n 1 17 VAL n 1 18 TRP n 1 19 GLY n 1 20 ILE n 1 21 LYS n 1 22 GLN n 1 23 LEU n 1 24 GLN n 1 25 ALA n 1 26 ARG n 1 27 LEU n 1 28 LEU n 1 29 ALA n 1 30 VAL n 1 31 GLU n 1 32 ARG n 1 33 TYR n 1 34 LEU n 1 35 LYS n 2 1 MET n 2 2 THR n 2 3 TRP n 2 4 GLU n 2 5 GLU n 2 6 TRP n 2 7 ASP n 2 8 MK8 n 2 9 LYS n 2 10 ILE n 2 11 GLU n 2 12 MK8 n 2 13 TYR n 2 14 THR n 2 15 MK8 n 2 16 LYS n 2 17 ILE n 2 18 GLU n 2 19 MK8 n 2 20 LEU n 2 21 ILE n 2 22 LYS n 2 23 LYS n 2 24 SER n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 35 'Human immunodeficiency virus 1' ? 11676 ? 2 1 sample 1 24 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP D6NUQ7_9HIV1 D6NUQ7 ? 1 NLLRAIEAQQHLLQLTVWGIKQLQARLLAVERYLK 560 2 PDB 5ZPW 5ZPW ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5ZPW A 1 ? 35 ? D6NUQ7 560 ? 594 ? 554 588 2 2 5ZPW B 1 ? 24 ? 5ZPW 626 ? 649 ? 626 649 3 1 5ZPW C 1 ? 35 ? D6NUQ7 560 ? 594 ? 554 588 4 2 5ZPW D 1 ? 24 ? 5ZPW 626 ? 649 ? 626 649 5 1 5ZPW E 1 ? 35 ? D6NUQ7 560 ? 594 ? 554 588 6 2 5ZPW F 1 ? 24 ? 5ZPW 626 ? 649 ? 626 649 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MK8 'L-peptide linking' n 2-methyl-L-norleucine ? 'C7 H15 N O2' 145.199 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5ZPW _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.74 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 55.14 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG 400, magnesium chloride, 2-[4-(2-Hydroxyethyl)-1-piperazinyl]ethanesulfonic acid' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX-225' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-07-23 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL17U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.98 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL17U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5ZPW _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.199 _reflns.d_resolution_low 21.184 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11745 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.14 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.8 _reflns.pdbx_Rmerge_I_obs 0.097 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 15.58 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.199 _reflns_shell.d_res_low 2.278 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.611 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5ZPW _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.199 _refine.ls_d_res_low 19.626 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 11741 _refine.ls_number_reflns_R_free 554 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.17 _refine.ls_percent_reflns_R_free 4.72 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2409 _refine.ls_R_factor_R_free 0.2626 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2399 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.37 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3VU6 _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 31.11 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.25 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1521 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 29 _refine_hist.number_atoms_total 1550 _refine_hist.d_res_high 2.199 _refine_hist.d_res_low 19.626 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? 1556 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.057 ? 2092 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 19.866 ? 908 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.046 ? 235 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 237 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.1991 2.4200 . . 153 2806 100.00 . . . 0.3057 . 0.2279 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4200 2.7694 . . 135 2833 100.00 . . . 0.2780 . 0.2340 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7694 3.4859 . . 145 2829 100.00 . . . 0.3066 . 0.2707 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4859 19.6270 . . 121 2719 93.00 . . . 0.2326 . 0.2302 . . . . . . . . . . # _struct.entry_id 5ZPW _struct.title 'Generation of a long-acting fusion inhibitor against HIV-1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5ZPW _struct_keywords.text 'Inhibitor, Complex, VIRUS, VIRUS LIKE PARTICLE' _struct_keywords.pdbx_keywords 'VIRUS LIKE PARTICLE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 1 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 1 ? LYS A 35 ? ASN A 554 LYS A 588 1 ? 35 HELX_P HELX_P2 AA2 THR B 2 ? SER B 24 ? THR B 627 SER B 649 1 ? 23 HELX_P HELX_P3 AA3 LEU C 2 ? LYS C 35 ? LEU C 555 LYS C 588 1 ? 34 HELX_P HELX_P4 AA4 THR D 2 ? SER D 24 ? THR D 627 SER D 649 1 ? 23 HELX_P HELX_P5 AA5 LEU E 2 ? LEU E 34 ? LEU E 555 LEU E 587 1 ? 33 HELX_P HELX_P6 AA6 THR F 2 ? SER F 24 ? THR F 627 SER F 649 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B ASP 7 C ? ? ? 1_555 B MK8 8 N ? ? B ASP 632 B MK8 633 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale2 covale both ? B MK8 8 C ? ? ? 1_555 B LYS 9 N ? ? B MK8 633 B LYS 634 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale3 covale both ? B GLU 11 C ? ? ? 1_555 B MK8 12 N ? ? B GLU 636 B MK8 637 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale4 covale both ? B MK8 12 C ? ? ? 1_555 B TYR 13 N ? ? B MK8 637 B TYR 638 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale5 covale both ? B THR 14 C ? ? ? 1_555 B MK8 15 N ? ? B THR 639 B MK8 640 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale6 covale both ? B MK8 15 C ? ? ? 1_555 B LYS 16 N ? ? B MK8 640 B LYS 641 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale7 covale both ? B GLU 18 C ? ? ? 1_555 B MK8 19 N ? ? B GLU 643 B MK8 644 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale8 covale both ? B MK8 19 C ? ? ? 1_555 B LEU 20 N ? ? B MK8 644 B LEU 645 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale9 covale both ? D ASP 7 C ? ? ? 1_555 D MK8 8 N ? ? D ASP 632 D MK8 633 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale10 covale both ? D MK8 8 C ? ? ? 1_555 D LYS 9 N ? ? D MK8 633 D LYS 634 1_555 ? ? ? ? ? ? ? 1.316 ? ? covale11 covale both ? D GLU 11 C ? ? ? 1_555 D MK8 12 N ? ? D GLU 636 D MK8 637 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale12 covale both ? D MK8 12 C ? ? ? 1_555 D TYR 13 N ? ? D MK8 637 D TYR 638 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale13 covale both ? D THR 14 C ? ? ? 1_555 D MK8 15 N ? ? D THR 639 D MK8 640 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale14 covale both ? D MK8 15 C ? ? ? 1_555 D LYS 16 N ? ? D MK8 640 D LYS 641 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale15 covale both ? D GLU 18 C ? ? ? 1_555 D MK8 19 N ? ? D GLU 643 D MK8 644 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale16 covale both ? D MK8 19 C ? ? ? 1_555 D LEU 20 N ? ? D MK8 644 D LEU 645 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale17 covale both ? F ASP 7 C ? ? ? 1_555 F MK8 8 N ? ? F ASP 632 F MK8 633 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale18 covale both ? F MK8 8 C ? ? ? 1_555 F LYS 9 N ? ? F MK8 633 F LYS 634 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale19 covale both ? F GLU 11 C ? ? ? 1_555 F MK8 12 N ? ? F GLU 636 F MK8 637 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale20 covale both ? F MK8 12 C ? ? ? 1_555 F TYR 13 N ? ? F MK8 637 F TYR 638 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale21 covale both ? F THR 14 C ? ? ? 1_555 F MK8 15 N ? ? F THR 639 F MK8 640 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale22 covale both ? F MK8 15 C ? ? ? 1_555 F LYS 16 N ? ? F MK8 640 F LYS 641 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale23 covale both ? F GLU 18 C ? ? ? 1_555 F MK8 19 N ? ? F GLU 643 F MK8 644 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale24 covale both ? F MK8 19 C ? ? ? 1_555 F LEU 20 N ? ? F MK8 644 F LEU 645 1_555 ? ? ? ? ? ? ? 1.326 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 5ZPW _atom_sites.fract_transf_matrix[1][1] 0.011801 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011801 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015119 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 554 554 ASN ASN A . n A 1 2 LEU 2 555 555 LEU LEU A . n A 1 3 LEU 3 556 556 LEU LEU A . n A 1 4 ARG 4 557 557 ARG ARG A . n A 1 5 ALA 5 558 558 ALA ALA A . n A 1 6 ILE 6 559 559 ILE ILE A . n A 1 7 GLU 7 560 560 GLU GLU A . n A 1 8 ALA 8 561 561 ALA ALA A . n A 1 9 GLN 9 562 562 GLN GLN A . n A 1 10 GLN 10 563 563 GLN GLN A . n A 1 11 HIS 11 564 564 HIS HIS A . n A 1 12 LEU 12 565 565 LEU LEU A . n A 1 13 LEU 13 566 566 LEU LEU A . n A 1 14 GLN 14 567 567 GLN GLN A . n A 1 15 LEU 15 568 568 LEU LEU A . n A 1 16 THR 16 569 569 THR THR A . n A 1 17 VAL 17 570 570 VAL VAL A . n A 1 18 TRP 18 571 571 TRP TRP A . n A 1 19 GLY 19 572 572 GLY GLY A . n A 1 20 ILE 20 573 573 ILE ILE A . n A 1 21 LYS 21 574 574 LYS LYS A . n A 1 22 GLN 22 575 575 GLN GLN A . n A 1 23 LEU 23 576 576 LEU LEU A . n A 1 24 GLN 24 577 577 GLN GLN A . n A 1 25 ALA 25 578 578 ALA ALA A . n A 1 26 ARG 26 579 579 ARG ARG A . n A 1 27 LEU 27 580 580 LEU LEU A . n A 1 28 LEU 28 581 581 LEU LEU A . n A 1 29 ALA 29 582 582 ALA ALA A . n A 1 30 VAL 30 583 583 VAL VAL A . n A 1 31 GLU 31 584 584 GLU GLU A . n A 1 32 ARG 32 585 585 ARG ARG A . n A 1 33 TYR 33 586 586 TYR TYR A . n A 1 34 LEU 34 587 587 LEU LEU A . n A 1 35 LYS 35 588 588 LYS LYS A . n B 2 1 MET 1 626 626 MET MET B . n B 2 2 THR 2 627 627 THR THR B . n B 2 3 TRP 3 628 628 TRP TRP B . n B 2 4 GLU 4 629 629 GLU GLU B . n B 2 5 GLU 5 630 630 GLU GLU B . n B 2 6 TRP 6 631 631 TRP TRP B . n B 2 7 ASP 7 632 632 ASP ASP B . n B 2 8 MK8 8 633 633 MK8 MK8 B . n B 2 9 LYS 9 634 634 LYS LYS B . n B 2 10 ILE 10 635 635 ILE ILE B . n B 2 11 GLU 11 636 636 GLU GLU B . n B 2 12 MK8 12 637 637 MK8 MK8 B . n B 2 13 TYR 13 638 638 TYR TYR B . n B 2 14 THR 14 639 639 THR THR B . n B 2 15 MK8 15 640 640 MK8 MK8 B . n B 2 16 LYS 16 641 641 LYS LYS B . n B 2 17 ILE 17 642 642 ILE ILE B . n B 2 18 GLU 18 643 643 GLU GLU B . n B 2 19 MK8 19 644 644 MK8 MK8 B . n B 2 20 LEU 20 645 645 LEU LEU B . n B 2 21 ILE 21 646 646 ILE ILE B . n B 2 22 LYS 22 647 647 LYS LYS B . n B 2 23 LYS 23 648 648 LYS LYS B . n B 2 24 SER 24 649 649 SER SER B . n C 1 1 ASN 1 554 554 ASN ASN C . n C 1 2 LEU 2 555 555 LEU LEU C . n C 1 3 LEU 3 556 556 LEU LEU C . n C 1 4 ARG 4 557 557 ARG ARG C . n C 1 5 ALA 5 558 558 ALA ALA C . n C 1 6 ILE 6 559 559 ILE ILE C . n C 1 7 GLU 7 560 560 GLU GLU C . n C 1 8 ALA 8 561 561 ALA ALA C . n C 1 9 GLN 9 562 562 GLN GLN C . n C 1 10 GLN 10 563 563 GLN GLN C . n C 1 11 HIS 11 564 564 HIS HIS C . n C 1 12 LEU 12 565 565 LEU LEU C . n C 1 13 LEU 13 566 566 LEU LEU C . n C 1 14 GLN 14 567 567 GLN GLN C . n C 1 15 LEU 15 568 568 LEU LEU C . n C 1 16 THR 16 569 569 THR THR C . n C 1 17 VAL 17 570 570 VAL VAL C . n C 1 18 TRP 18 571 571 TRP TRP C . n C 1 19 GLY 19 572 572 GLY GLY C . n C 1 20 ILE 20 573 573 ILE ILE C . n C 1 21 LYS 21 574 574 LYS LYS C . n C 1 22 GLN 22 575 575 GLN GLN C . n C 1 23 LEU 23 576 576 LEU LEU C . n C 1 24 GLN 24 577 577 GLN GLN C . n C 1 25 ALA 25 578 578 ALA ALA C . n C 1 26 ARG 26 579 579 ARG ARG C . n C 1 27 LEU 27 580 580 LEU LEU C . n C 1 28 LEU 28 581 581 LEU LEU C . n C 1 29 ALA 29 582 582 ALA ALA C . n C 1 30 VAL 30 583 583 VAL VAL C . n C 1 31 GLU 31 584 584 GLU GLU C . n C 1 32 ARG 32 585 585 ARG ARG C . n C 1 33 TYR 33 586 586 TYR TYR C . n C 1 34 LEU 34 587 587 LEU LEU C . n C 1 35 LYS 35 588 588 LYS LYS C . n D 2 1 MET 1 626 626 MET MET D . n D 2 2 THR 2 627 627 THR THR D . n D 2 3 TRP 3 628 628 TRP TRP D . n D 2 4 GLU 4 629 629 GLU GLU D . n D 2 5 GLU 5 630 630 GLU GLU D . n D 2 6 TRP 6 631 631 TRP TRP D . n D 2 7 ASP 7 632 632 ASP ASP D . n D 2 8 MK8 8 633 633 MK8 MK8 D . n D 2 9 LYS 9 634 634 LYS LYS D . n D 2 10 ILE 10 635 635 ILE ILE D . n D 2 11 GLU 11 636 636 GLU GLU D . n D 2 12 MK8 12 637 637 MK8 MK8 D . n D 2 13 TYR 13 638 638 TYR TYR D . n D 2 14 THR 14 639 639 THR THR D . n D 2 15 MK8 15 640 640 MK8 MK8 D . n D 2 16 LYS 16 641 641 LYS LYS D . n D 2 17 ILE 17 642 642 ILE ILE D . n D 2 18 GLU 18 643 643 GLU GLU D . n D 2 19 MK8 19 644 644 MK8 MK8 D . n D 2 20 LEU 20 645 645 LEU LEU D . n D 2 21 ILE 21 646 646 ILE ILE D . n D 2 22 LYS 22 647 647 LYS LYS D . n D 2 23 LYS 23 648 648 LYS LYS D . n D 2 24 SER 24 649 649 SER SER D . n E 1 1 ASN 1 554 554 ASN ASN E . n E 1 2 LEU 2 555 555 LEU LEU E . n E 1 3 LEU 3 556 556 LEU LEU E . n E 1 4 ARG 4 557 557 ARG ARG E . n E 1 5 ALA 5 558 558 ALA ALA E . n E 1 6 ILE 6 559 559 ILE ILE E . n E 1 7 GLU 7 560 560 GLU GLU E . n E 1 8 ALA 8 561 561 ALA ALA E . n E 1 9 GLN 9 562 562 GLN GLN E . n E 1 10 GLN 10 563 563 GLN GLN E . n E 1 11 HIS 11 564 564 HIS HIS E . n E 1 12 LEU 12 565 565 LEU LEU E . n E 1 13 LEU 13 566 566 LEU LEU E . n E 1 14 GLN 14 567 567 GLN GLN E . n E 1 15 LEU 15 568 568 LEU LEU E . n E 1 16 THR 16 569 569 THR THR E . n E 1 17 VAL 17 570 570 VAL VAL E . n E 1 18 TRP 18 571 571 TRP TRP E . n E 1 19 GLY 19 572 572 GLY GLY E . n E 1 20 ILE 20 573 573 ILE ILE E . n E 1 21 LYS 21 574 574 LYS LYS E . n E 1 22 GLN 22 575 575 GLN GLN E . n E 1 23 LEU 23 576 576 LEU LEU E . n E 1 24 GLN 24 577 577 GLN GLN E . n E 1 25 ALA 25 578 578 ALA ALA E . n E 1 26 ARG 26 579 579 ARG ARG E . n E 1 27 LEU 27 580 580 LEU LEU E . n E 1 28 LEU 28 581 581 LEU LEU E . n E 1 29 ALA 29 582 582 ALA ALA E . n E 1 30 VAL 30 583 583 VAL VAL E . n E 1 31 GLU 31 584 584 GLU GLU E . n E 1 32 ARG 32 585 585 ARG ARG E . n E 1 33 TYR 33 586 586 TYR TYR E . n E 1 34 LEU 34 587 587 LEU LEU E . n E 1 35 LYS 35 588 588 LYS LYS E . n F 2 1 MET 1 626 626 MET MET F . n F 2 2 THR 2 627 627 THR THR F . n F 2 3 TRP 3 628 628 TRP TRP F . n F 2 4 GLU 4 629 629 GLU GLU F . n F 2 5 GLU 5 630 630 GLU GLU F . n F 2 6 TRP 6 631 631 TRP TRP F . n F 2 7 ASP 7 632 632 ASP ASP F . n F 2 8 MK8 8 633 633 MK8 MK8 F . n F 2 9 LYS 9 634 634 LYS LYS F . n F 2 10 ILE 10 635 635 ILE ILE F . n F 2 11 GLU 11 636 636 GLU GLU F . n F 2 12 MK8 12 637 637 MK8 MK8 F . n F 2 13 TYR 13 638 638 TYR TYR F . n F 2 14 THR 14 639 639 THR THR F . n F 2 15 MK8 15 640 640 MK8 MK8 F . n F 2 16 LYS 16 641 641 LYS LYS F . n F 2 17 ILE 17 642 642 ILE ILE F . n F 2 18 GLU 18 643 643 GLU GLU F . n F 2 19 MK8 19 644 644 MK8 MK8 F . n F 2 20 LEU 20 645 645 LEU LEU F . n F 2 21 ILE 21 646 646 ILE ILE F . n F 2 22 LYS 22 647 647 LYS LYS F . n F 2 23 LYS 23 648 648 LYS LYS F . n F 2 24 SER 24 649 649 SER SER F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 HOH 1 601 3 HOH HOH A . G 3 HOH 2 602 19 HOH HOH A . G 3 HOH 3 603 10 HOH HOH A . G 3 HOH 4 604 15 HOH HOH A . G 3 HOH 5 605 27 HOH HOH A . H 3 HOH 1 701 17 HOH HOH B . I 3 HOH 1 601 16 HOH HOH C . I 3 HOH 2 602 11 HOH HOH C . I 3 HOH 3 603 9 HOH HOH C . I 3 HOH 4 604 23 HOH HOH C . I 3 HOH 5 605 7 HOH HOH C . I 3 HOH 6 606 8 HOH HOH C . I 3 HOH 7 607 25 HOH HOH C . J 3 HOH 1 701 26 HOH HOH D . J 3 HOH 2 702 20 HOH HOH D . J 3 HOH 3 703 18 HOH HOH D . J 3 HOH 4 704 29 HOH HOH D . K 3 HOH 1 601 21 HOH HOH E . K 3 HOH 2 602 4 HOH HOH E . K 3 HOH 3 603 14 HOH HOH E . K 3 HOH 4 604 6 HOH HOH E . K 3 HOH 5 605 12 HOH HOH E . K 3 HOH 6 606 2 HOH HOH E . K 3 HOH 7 607 5 HOH HOH E . K 3 HOH 8 608 24 HOH HOH E . K 3 HOH 9 609 13 HOH HOH E . K 3 HOH 10 610 22 HOH HOH E . L 3 HOH 1 701 28 HOH HOH F . L 3 HOH 2 702 1 HOH HOH F . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9680 ? 1 MORE -90 ? 1 'SSA (A^2)' 9540 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-03-06 2 'Structure model' 1 1 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 34.1601 155.4199 7.9887 0.4030 0.4627 0.5568 0.0020 0.0269 -0.0604 1.4715 1.2369 0.6747 -0.4568 0.2850 -1.2826 0.0140 0.0901 -0.1467 0.7093 -0.3606 -0.3174 -0.0335 0.0888 -0.0000 'X-RAY DIFFRACTION' 2 ? refined 32.9934 161.1933 -3.6619 0.5922 0.5906 0.4448 0.0514 0.0715 0.0722 0.6058 0.6576 4.2459 -0.2816 -1.1945 -0.6103 0.0068 0.3533 -0.1359 -0.1246 -0.3403 0.5522 0.2015 0.3075 0.0012 'X-RAY DIFFRACTION' 3 ? refined 27.4687 156.6676 14.6365 0.5390 0.5057 0.4846 -0.0189 0.0890 -0.0331 0.8349 1.1532 -0.6530 -0.1513 0.0815 0.2344 0.0936 -0.0611 -0.0703 -0.2927 -0.1274 0.0161 -0.0640 -0.0016 0.0016 'X-RAY DIFFRACTION' 4 ? refined 35.2697 167.0184 16.6617 0.4980 0.5011 0.2556 -0.1081 0.0441 -0.0902 4.7576 2.2625 1.0451 2.9583 -0.0975 0.9481 0.0689 -0.0924 -0.2612 0.2888 -0.3151 0.6357 -0.1372 0.3051 -0.0036 'X-RAY DIFFRACTION' 5 ? refined 25.1512 153.9852 5.9923 0.5112 0.5449 0.5451 -0.0760 -0.0155 -0.0504 0.7089 1.2094 0.0201 -0.4026 -0.1322 -0.3139 0.1049 0.0763 -0.0814 0.1704 -0.0379 0.6609 -0.1250 -0.1894 0.0007 'X-RAY DIFFRACTION' 6 ? refined 15.7749 163.1847 8.9229 0.3964 0.6202 0.5942 0.0349 -0.0273 -0.1296 3.3014 1.5960 0.8676 -1.5319 -0.6339 0.9358 0.0199 0.1846 -0.2979 -0.1196 -0.4079 0.5057 0.0626 -0.3711 -0.0099 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 554 through 588 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 626 through 649 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 554 through 588 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'D' and (resid 626 through 649 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'E' and (resid 554 through 588 ) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'F' and (resid 626 through 649 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.10.1_2155: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CE B MK8 633 ? ? CE B MK8 637 ? ? 1.49 2 1 CE D MK8 633 ? ? CE D MK8 637 ? ? 1.49 3 1 CE F MK8 640 ? ? CE F MK8 644 ? ? 1.49 4 1 CE F MK8 633 ? ? CE F MK8 637 ? ? 1.49 5 1 CE B MK8 640 ? ? CE B MK8 644 ? ? 1.49 6 1 CE D MK8 640 ? ? CE D MK8 644 ? ? 1.49 7 1 NZ F LYS 634 ? ? O F HOH 701 ? ? 2.00 8 1 O C LYS 588 ? ? O C HOH 601 ? ? 2.02 9 1 OE2 C GLU 560 ? ? O C HOH 602 ? ? 2.16 10 1 OE1 A GLN 575 ? ? O A HOH 601 ? ? 2.18 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 F _pdbx_validate_rmsd_angle.auth_comp_id_1 LEU _pdbx_validate_rmsd_angle.auth_seq_id_1 645 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 F _pdbx_validate_rmsd_angle.auth_comp_id_2 LEU _pdbx_validate_rmsd_angle.auth_seq_id_2 645 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CG _pdbx_validate_rmsd_angle.auth_asym_id_3 F _pdbx_validate_rmsd_angle.auth_comp_id_3 LEU _pdbx_validate_rmsd_angle.auth_seq_id_3 645 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 100.53 _pdbx_validate_rmsd_angle.angle_target_value 115.30 _pdbx_validate_rmsd_angle.angle_deviation -14.77 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.30 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id THR _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 627 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 47.94 _pdbx_validate_torsion.psi 162.16 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 MK8 C C N N 236 MK8 N N N N 237 MK8 O O N N 238 MK8 CA C N S 239 MK8 CB C N N 240 MK8 CD C N N 241 MK8 CE C N N 242 MK8 CG C N N 243 MK8 CB1 C N N 244 MK8 OXT O N N 245 MK8 H H N N 246 MK8 H2 H N N 247 MK8 HB H N N 248 MK8 HBA H N N 249 MK8 HD H N N 250 MK8 HDA H N N 251 MK8 HE H N N 252 MK8 HEA H N N 253 MK8 HEB H N N 254 MK8 HG H N N 255 MK8 HGA H N N 256 MK8 HB1 H N N 257 MK8 HB1A H N N 258 MK8 HB1B H N N 259 MK8 HXT H N N 260 SER N N N N 261 SER CA C N S 262 SER C C N N 263 SER O O N N 264 SER CB C N N 265 SER OG O N N 266 SER OXT O N N 267 SER H H N N 268 SER H2 H N N 269 SER HA H N N 270 SER HB2 H N N 271 SER HB3 H N N 272 SER HG H N N 273 SER HXT H N N 274 THR N N N N 275 THR CA C N S 276 THR C C N N 277 THR O O N N 278 THR CB C N R 279 THR OG1 O N N 280 THR CG2 C N N 281 THR OXT O N N 282 THR H H N N 283 THR H2 H N N 284 THR HA H N N 285 THR HB H N N 286 THR HG1 H N N 287 THR HG21 H N N 288 THR HG22 H N N 289 THR HG23 H N N 290 THR HXT H N N 291 TRP N N N N 292 TRP CA C N S 293 TRP C C N N 294 TRP O O N N 295 TRP CB C N N 296 TRP CG C Y N 297 TRP CD1 C Y N 298 TRP CD2 C Y N 299 TRP NE1 N Y N 300 TRP CE2 C Y N 301 TRP CE3 C Y N 302 TRP CZ2 C Y N 303 TRP CZ3 C Y N 304 TRP CH2 C Y N 305 TRP OXT O N N 306 TRP H H N N 307 TRP H2 H N N 308 TRP HA H N N 309 TRP HB2 H N N 310 TRP HB3 H N N 311 TRP HD1 H N N 312 TRP HE1 H N N 313 TRP HE3 H N N 314 TRP HZ2 H N N 315 TRP HZ3 H N N 316 TRP HH2 H N N 317 TRP HXT H N N 318 TYR N N N N 319 TYR CA C N S 320 TYR C C N N 321 TYR O O N N 322 TYR CB C N N 323 TYR CG C Y N 324 TYR CD1 C Y N 325 TYR CD2 C Y N 326 TYR CE1 C Y N 327 TYR CE2 C Y N 328 TYR CZ C Y N 329 TYR OH O N N 330 TYR OXT O N N 331 TYR H H N N 332 TYR H2 H N N 333 TYR HA H N N 334 TYR HB2 H N N 335 TYR HB3 H N N 336 TYR HD1 H N N 337 TYR HD2 H N N 338 TYR HE1 H N N 339 TYR HE2 H N N 340 TYR HH H N N 341 TYR HXT H N N 342 VAL N N N N 343 VAL CA C N S 344 VAL C C N N 345 VAL O O N N 346 VAL CB C N N 347 VAL CG1 C N N 348 VAL CG2 C N N 349 VAL OXT O N N 350 VAL H H N N 351 VAL H2 H N N 352 VAL HA H N N 353 VAL HB H N N 354 VAL HG11 H N N 355 VAL HG12 H N N 356 VAL HG13 H N N 357 VAL HG21 H N N 358 VAL HG22 H N N 359 VAL HG23 H N N 360 VAL HXT H N N 361 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 MK8 C CA sing N N 224 MK8 C OXT sing N N 225 MK8 N H sing N N 226 MK8 N H2 sing N N 227 MK8 O C doub N N 228 MK8 CA N sing N N 229 MK8 CA CB sing N N 230 MK8 CB HB sing N N 231 MK8 CB HBA sing N N 232 MK8 CD CG sing N N 233 MK8 CD HD sing N N 234 MK8 CD HDA sing N N 235 MK8 CE CD sing N N 236 MK8 CE HE sing N N 237 MK8 CE HEA sing N N 238 MK8 CE HEB sing N N 239 MK8 CG CB sing N N 240 MK8 CG HG sing N N 241 MK8 CG HGA sing N N 242 MK8 CB1 CA sing N N 243 MK8 CB1 HB1 sing N N 244 MK8 CB1 HB1A sing N N 245 MK8 CB1 HB1B sing N N 246 MK8 OXT HXT sing N N 247 SER N CA sing N N 248 SER N H sing N N 249 SER N H2 sing N N 250 SER CA C sing N N 251 SER CA CB sing N N 252 SER CA HA sing N N 253 SER C O doub N N 254 SER C OXT sing N N 255 SER CB OG sing N N 256 SER CB HB2 sing N N 257 SER CB HB3 sing N N 258 SER OG HG sing N N 259 SER OXT HXT sing N N 260 THR N CA sing N N 261 THR N H sing N N 262 THR N H2 sing N N 263 THR CA C sing N N 264 THR CA CB sing N N 265 THR CA HA sing N N 266 THR C O doub N N 267 THR C OXT sing N N 268 THR CB OG1 sing N N 269 THR CB CG2 sing N N 270 THR CB HB sing N N 271 THR OG1 HG1 sing N N 272 THR CG2 HG21 sing N N 273 THR CG2 HG22 sing N N 274 THR CG2 HG23 sing N N 275 THR OXT HXT sing N N 276 TRP N CA sing N N 277 TRP N H sing N N 278 TRP N H2 sing N N 279 TRP CA C sing N N 280 TRP CA CB sing N N 281 TRP CA HA sing N N 282 TRP C O doub N N 283 TRP C OXT sing N N 284 TRP CB CG sing N N 285 TRP CB HB2 sing N N 286 TRP CB HB3 sing N N 287 TRP CG CD1 doub Y N 288 TRP CG CD2 sing Y N 289 TRP CD1 NE1 sing Y N 290 TRP CD1 HD1 sing N N 291 TRP CD2 CE2 doub Y N 292 TRP CD2 CE3 sing Y N 293 TRP NE1 CE2 sing Y N 294 TRP NE1 HE1 sing N N 295 TRP CE2 CZ2 sing Y N 296 TRP CE3 CZ3 doub Y N 297 TRP CE3 HE3 sing N N 298 TRP CZ2 CH2 doub Y N 299 TRP CZ2 HZ2 sing N N 300 TRP CZ3 CH2 sing Y N 301 TRP CZ3 HZ3 sing N N 302 TRP CH2 HH2 sing N N 303 TRP OXT HXT sing N N 304 TYR N CA sing N N 305 TYR N H sing N N 306 TYR N H2 sing N N 307 TYR CA C sing N N 308 TYR CA CB sing N N 309 TYR CA HA sing N N 310 TYR C O doub N N 311 TYR C OXT sing N N 312 TYR CB CG sing N N 313 TYR CB HB2 sing N N 314 TYR CB HB3 sing N N 315 TYR CG CD1 doub Y N 316 TYR CG CD2 sing Y N 317 TYR CD1 CE1 sing Y N 318 TYR CD1 HD1 sing N N 319 TYR CD2 CE2 doub Y N 320 TYR CD2 HD2 sing N N 321 TYR CE1 CZ doub Y N 322 TYR CE1 HE1 sing N N 323 TYR CE2 CZ sing Y N 324 TYR CE2 HE2 sing N N 325 TYR CZ OH sing N N 326 TYR OH HH sing N N 327 TYR OXT HXT sing N N 328 VAL N CA sing N N 329 VAL N H sing N N 330 VAL N H2 sing N N 331 VAL CA C sing N N 332 VAL CA CB sing N N 333 VAL CA HA sing N N 334 VAL C O doub N N 335 VAL C OXT sing N N 336 VAL CB CG1 sing N N 337 VAL CB CG2 sing N N 338 VAL CB HB sing N N 339 VAL CG1 HG11 sing N N 340 VAL CG1 HG12 sing N N 341 VAL CG1 HG13 sing N N 342 VAL CG2 HG21 sing N N 343 VAL CG2 HG22 sing N N 344 VAL CG2 HG23 sing N N 345 VAL OXT HXT sing N N 346 # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 21602121 _pdbx_audit_support.ordinal 1 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3VU6 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'assay for oligomerization' _pdbx_struct_assembly_auth_evidence.details ? #